HG10016000 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10016000
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr03: 2087406 .. 2087618 (+)
RNA-Seq ExpressionHG10016000
SyntenyHG10016000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATACCGTCAAGCCGAGCCAACCCAAGCCGAGCCAACCCCTCACCGTCAACCTCAACCGTCTCCCAACCCAAAGCCATTGATGCTAAACGGCTCCCCCTCTCTACCGGCCCGGCGACTTCAACGGCTCGACCGTACCGTATTACTCACTCTCCCCTCCCGACACATTCGGCTCACGCGTCCGGCACTTCGTCGCCGACGCAACTTCTTTAA

mRNA sequence

ATGATACCGTCAAGCCGAGCCAACCCAAGCCGAGCCAACCCCTCACCGTCAACCTCAACCGTCTCCCAACCCAAAGCCATTGATGCTAAACGGCTCCCCCTCTCTACCGGCCCGGCGACTTCAACGGCTCGACCGTACCGTATTACTCACTCTCCCCTCCCGACACATTCGGCTCACGCGTCCGGCACTTCGTCGCCGACGCAACTTCTTTAA

Coding sequence (CDS)

ATGATACCGTCAAGCCGAGCCAACCCAAGCCGAGCCAACCCCTCACCGTCAACCTCAACCGTCTCCCAACCCAAAGCCATTGATGCTAAACGGCTCCCCCTCTCTACCGGCCCGGCGACTTCAACGGCTCGACCGTACCGTATTACTCACTCTCCCCTCCCGACACATTCGGCTCACGCGTCCGGCACTTCGTCGCCGACGCAACTTCTTTAA

Protein sequence

MIPSSRANPSRANPSPSTSTVSQPKAIDAKRLPLSTGPATSTARPYRITHSPLPTHSAHASGTSSPTQLL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10016000.1HG10016000.1mRNA