HG10014576 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACTTGTTAGACAGTCATTGCTATTCCAAAGATGACAATTTAGGATTGCATGTATTGTTCCCAGACGAGCCGCAAAATTGGTCGTTTAAAGGGAATTGGGATGACACGACGAATTTTCACTATAGGTTGGAGTGGGAAGTAGGGTATTTAGAATTTGATAGTTTTACTAATAATCCTGACTTTATGATGAATTATTGTAGCAACAAAACCTGCATTTGGAGTGTGAGACAGAATGGGGTTTATTTGAACAATGCAAATACCCAACAGGATTTTTATGATTACTAG ATGTACTTGTTAGACAGTCATTGCTATTCCAAAGATGACAATTTAGGATTGCATGTATTGTTCCCAGACGAGCCGCAAAATTGGTCGTTTAAAGGGAATTGGGATGACACGACGAATTTTCACTATAGGTTGGAGTGGGAAGTAGGGTATTTAGAATTTGATAGTTTTACTAATAATCCTGACTTTATGATGAATTATTGTAGCAACAAAACCTGCATTTGGAGTGTGAGACAGAATGGGGTTTATTTGAACAATGCAAATACCCAACAGGATTTTTATGATTACTAG ATGTACTTGTTAGACAGTCATTGCTATTCCAAAGATGACAATTTAGGATTGCATGTATTGTTCCCAGACGAGCCGCAAAATTGGTCGTTTAAAGGGAATTGGGATGACACGACGAATTTTCACTATAGGTTGGAGTGGGAAGTAGGGTATTTAGAATTTGATAGTTTTACTAATAATCCTGACTTTATGATGAATTATTGTAGCAACAAAACCTGCATTTGGAGTGTGAGACAGAATGGGGTTTATTTGAACAATGCAAATACCCAACAGGATTTTTATGATTACTAG MYLLDSHCYSKDDNLGLHVLFPDEPQNWSFKGNWDDTTNFHYRLEWEVGYLEFDSFTNNPDFMMNYCSNKTCIWSVRQNGVYLNNANTQQDFYDY Homology
BLAST of HG10014576 vs. NCBI nr
Match: KAE8648167.1 (hypothetical protein Csa_018435 [Cucumis sativus]) HSP 1 Score: 166.0 bits (419), Expect = 1.6e-37 Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of HG10014576 vs. NCBI nr
Match: XP_008453055.1 (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]) HSP 1 Score: 137.5 bits (345), Expect = 6.0e-29 Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of HG10014576 vs. NCBI nr
Match: XP_022933678.1 (S-protein homolog 2-like [Cucurbita moschata]) HSP 1 Score: 136.7 bits (343), Expect = 1.0e-28 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of HG10014576 vs. NCBI nr
Match: XP_023546843.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127.1 bits (318), Expect = 8.1e-26 Identity = 50/95 (52.63%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of HG10014576 vs. NCBI nr
Match: KGN51432.1 (hypothetical protein Csa_007732 [Cucumis sativus]) HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25 Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0
BLAST of HG10014576 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-05 Identity = 28/85 (32.94%), Postives = 41/85 (48.24%), Query Frame = 0
BLAST of HG10014576 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 4.8e-05 Identity = 24/77 (31.17%), Postives = 40/77 (51.95%), Query Frame = 0
BLAST of HG10014576 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 6.3e-05 Identity = 29/88 (32.95%), Postives = 41/88 (46.59%), Query Frame = 0
BLAST of HG10014576 vs. ExPASy Swiss-Prot
Match: Q3E9W6 (S-protein homolog 20 OS=Arabidopsis thaliana OX=3702 GN=SPH20 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.4e-04 Identity = 29/79 (36.71%), Postives = 36/79 (45.57%), Query Frame = 0
BLAST of HG10014576 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.1e-04 Identity = 26/85 (30.59%), Postives = 43/85 (50.59%), Query Frame = 0
BLAST of HG10014576 vs. ExPASy TrEMBL
Match: A0A0A0KL79 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 7.6e-38 Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of HG10014576 vs. ExPASy TrEMBL
Match: A0A1S3BUQ9 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.9e-29 Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of HG10014576 vs. ExPASy TrEMBL
Match: A0A6J1F5H5 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.9e-29 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of HG10014576 vs. ExPASy TrEMBL
Match: A0A0A0KIQ4 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G017790 PE=3 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.7e-27 Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of HG10014576 vs. ExPASy TrEMBL
Match: A0A0A0KSN2 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 6.7e-26 Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0
BLAST of HG10014576 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 50.1 bits (118), Expect = 1.2e-06 Identity = 28/85 (32.94%), Postives = 41/85 (48.24%), Query Frame = 0
BLAST of HG10014576 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 48.5 bits (114), Expect = 3.4e-06 Identity = 24/77 (31.17%), Postives = 40/77 (51.95%), Query Frame = 0
BLAST of HG10014576 vs. TAIR 10
Match: AT4G24975.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 47.0 bits (110), Expect = 9.9e-06 Identity = 29/79 (36.71%), Postives = 36/79 (45.57%), Query Frame = 0
BLAST of HG10014576 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04 Identity = 23/77 (29.87%), Postives = 34/77 (44.16%), Query Frame = 0
BLAST of HG10014576 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 42.4 bits (98), Expect = 2.4e-04 Identity = 26/87 (29.89%), Postives = 45/87 (51.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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