HG10014004 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTCTTTAATGGCTGGTTGGGACTCCCCGGCGACTGACCCCCAAGAAGGTAATATCAGTTTTTCAGATTAAATTCAATTTTGAATTTTGTTTTTCCTCTCTAAAATTAATAATTTTAATGTTTATATCCAGTGAGTCACCGGAGGAACAAGTCATTGACAAAAGAAGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTAAGAGCCATTTTAAGTCCATATGAGAGCTCTGAGGTAATTTTTTTTTTTTTTCAATTTTGGAGTGTTTGGATTTTTTTCATTTTTTATTAATTAATTATGGAATTTTGGGTTTTGGCAGGAAAAGAAAATGGAATATGGTGGAAATAATAATCTTCAGAGATCAGCCTCTGTGCCTCCATTCAATGCAAGGAAGGGTTTATTGAACATGGAATCTGAAACTAACTTAGAAAAGCCCAAGAAAAATGCCTGGTAATTATATAATATATTACTCTCCTCCTTTAAATTTAATTAAAATATGATAAAAATGCAAAATATTTGTGAGTATGAATTATAAATGTTGGGGGTGAATCTGTCATTTCCACAGGTGGAGAAGAAGCAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCCACGTGGCAAACATGGCGGCTTCCAGACTTGGTCGCGGTGGCGTCAGTGCTTGA ATGGGTTCTTTAATGGCTGGTTGGGACTCCCCGGCGACTGACCCCCAAGAAGTGAGTCACCGGAGGAACAAGTCATTGACAAAAGAAGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTAAGAGCCATTTTAAGTCCATATGAGAGCTCTGAGGAAAAGAAAATGGAATATGGTGGAAATAATAATCTTCAGAGATCAGCCTCTGTGCCTCCATTCAATGCAAGGAAGGGTTTATTGAACATGGAATCTGAAACTAACTTAGAAAAGCCCAAGAAAAATGCCTGGTGGAGAAGAAGCAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCCACGTGGCAAACATGGCGGCTTCCAGACTTGGTCGCGGTGGCGTCAGTGCTTGA ATGGGTTCTTTAATGGCTGGTTGGGACTCCCCGGCGACTGACCCCCAAGAAGTGAGTCACCGGAGGAACAAGTCATTGACAAAAGAAGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAACATCTAAGAGCCATTTTAAGTCCATATGAGAGCTCTGAGGAAAAGAAAATGGAATATGGTGGAAATAATAATCTTCAGAGATCAGCCTCTGTGCCTCCATTCAATGCAAGGAAGGGTTTATTGAACATGGAATCTGAAACTAACTTAGAAAAGCCCAAGAAAAATGCCTGGTGGAGAAGAAGCAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGATCTGGTAACAGCTACGTGTCGCAGTTCCACGTGGCAAACATGGCGGCTTCCAGACTTGGTCGCGGTGGCGTCAGTGCTTGA MGSLMAGWDSPATDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPYESSEEKKMEYGGNNNLQRSASVPPFNARKGLLNMESETNLEKPKKNAWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA Homology
BLAST of HG10014004 vs. NCBI nr
Match: XP_038898962.1 (uncharacterized protein LOC120086405 [Benincasa hispida]) HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66 Identity = 132/144 (91.67%), Postives = 135/144 (93.75%), Query Frame = 0
BLAST of HG10014004 vs. NCBI nr
Match: XP_008466545.1 (PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo] >KAA0041574.1 putative DNA polymerase epsilon catalytic subunit A [Cucumis melo var. makuwa] >TYK19682.1 putative DNA polymerase epsilon catalytic subunit A [Cucumis melo var. makuwa]) HSP 1 Score: 255.4 bits (651), Expect = 3.0e-64 Identity = 129/145 (88.97%), Postives = 136/145 (93.79%), Query Frame = 0
BLAST of HG10014004 vs. NCBI nr
Match: XP_004147861.1 (uncharacterized protein LOC101222738 [Cucumis sativus] >KGN59980.1 hypothetical protein Csa_001013 [Cucumis sativus]) HSP 1 Score: 251.5 bits (641), Expect = 4.3e-63 Identity = 128/145 (88.28%), Postives = 134/145 (92.41%), Query Frame = 0
BLAST of HG10014004 vs. NCBI nr
Match: XP_022982140.1 (uncharacterized protein LOC111481065 [Cucurbita maxima]) HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61 Identity = 124/146 (84.93%), Postives = 136/146 (93.15%), Query Frame = 0
BLAST of HG10014004 vs. NCBI nr
Match: XP_022940046.1 (uncharacterized protein LOC111445795 [Cucurbita moschata] >KAG6608544.1 hypothetical protein SDJN03_01886, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037867.1 hypothetical protein SDJN02_01498 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 245.0 bits (624), Expect = 4.0e-61 Identity = 123/146 (84.25%), Postives = 135/146 (92.47%), Query Frame = 0
BLAST of HG10014004 vs. ExPASy TrEMBL
Match: A0A5D3D820 (Putative DNA polymerase epsilon catalytic subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00760 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64 Identity = 129/145 (88.97%), Postives = 136/145 (93.79%), Query Frame = 0
BLAST of HG10014004 vs. ExPASy TrEMBL
Match: A0A1S3CST6 (uncharacterized protein LOC103503930 OS=Cucumis melo OX=3656 GN=LOC103503930 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64 Identity = 129/145 (88.97%), Postives = 136/145 (93.79%), Query Frame = 0
BLAST of HG10014004 vs. ExPASy TrEMBL
Match: A0A0A0LDC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G859670 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 2.1e-63 Identity = 128/145 (88.28%), Postives = 134/145 (92.41%), Query Frame = 0
BLAST of HG10014004 vs. ExPASy TrEMBL
Match: A0A6J1J1T2 (uncharacterized protein LOC111481065 OS=Cucurbita maxima OX=3661 GN=LOC111481065 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 6.7e-62 Identity = 124/146 (84.93%), Postives = 136/146 (93.15%), Query Frame = 0
BLAST of HG10014004 vs. ExPASy TrEMBL
Match: A0A6J1FHE8 (uncharacterized protein LOC111445795 OS=Cucurbita moschata OX=3662 GN=LOC111445795 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61 Identity = 123/146 (84.25%), Postives = 135/146 (92.47%), Query Frame = 0
BLAST of HG10014004 vs. TAIR 10
Match: AT1G19530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19 Identity = 59/136 (43.38%), Postives = 78/136 (57.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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