HG10012251 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCTTTCCGGAGATTTCTCTCGACAAATCGGAACCGTCTCTTTCCCGACATCTTGAAATGCCGCCGAAAAACGACCTCAACTGAGCTCCAGGCAGCTGTCGACGTCGCCGCTCGGACTGACAACGGTTATCCTTCAATTCCGACTCATAAGGTCACCGTTCACGATAGGGAGAGAGGCGTTGTTCATGAGTTCGTTGTTCCTGAGGTACGGCATCATTTTCAGAAATGTAAAGAACATAAGTCCTTTTTCTTTTTATTTAATTTTGTTTTACTTCGTTGAAATTTCTTTTTTCGCCTCTTGAGCGAGTTTTCCAATTTTTTAGAATCGATATAACGCGTTCCTCCTCGGTTACAGATTGTATGATCTGTCTGATTATAAATTGTTTAGAGTTTTGGGAATTCGTTGGGAATTCGAAGTTCACAACATCTTTTCACTTTTAGTGGTTATGACTTATTGTGGCGTGGGTGATCAATTTTGCAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCATTTGCTTGCAGGCACGGTATTGTTCCCTAATTCACCAATTATTGATGAACTTTTCACATTCATCTTCCAATTCATGTTTAGAAATTATTTCAATGGGTAACACCATTGATAATAGAATGTATTGGCGTCGAATCAGTAATTTCACTTGCCTGCTAGTGACCTTTGTCATTGAAAGGCTGAAATTTGTCATAAAAATTTGCAGTTACTTCTTAAGATCGTGGACTTATTAACCCATAGACTTATTTTTATTTTGTATCCTATGGACAATGGTAAGCATAGGCATGAAAATGGGATTCTAATGCATGTCATTTTCAATAAATTAAGCACCACGACTTGAAAAAAGTACACACACATCTATAGAAAATCTATCTATCTGTCTATCTATCTATACTTTCGATAGATTTCAATGATTTAGCTGCATTAGGTGCCATGTCAAAGAATGTAACTGCCTGTTCATGGTCACAGCTGTGTAAAAAAACCAAATATCAGAATGGTTTACGACCAGATAAAAATCATTTACACTGAAAAAAAAAAAAAAAAAAAAAACCCTGCCCTTCTTTCGACTGATACTTCCTGTAATAGGGCCATTTTCTGATTCCTTTTGATCTCCATTGTTGGTACATATGCCATGTTCTGAAAATATTTGTTTGATGACAGGTTGTTGCACTAGTTGTGCTGTTCGAATTAAATCAGGCGAAATTAGACAGCCAGAAGCCCTTGGAATATCTGCAGAGTTGAAATCAAAGGCAATTTGTTGTACTTGTTTCTAGACTTACTATTATCATTATTATTTGAATAAATTGCTATCATATGAAAAGGCTGCTGTTTTATTTTAGTGTTTTCCACTTAGAAATCACATAATTTCTCTGTTGAATTCTCTTCAATATGAATATCGGTTCATTTCCTGGGGGAAAACCATGAAGCAAAATCTGAGGTTATGCATTGTGATGCTTCAGTAAAATAAAACTATAACTGCAACTGCTCATTCTAGATATGAAGTTTGAGTTTGCGATCTTAGTTTTTACCAGGTGAGCATGGTAAGCTTATTTAGTGTAAATTTGTCTAGCTGGTATGTTTGAAGCAACTCCTGCTCATTGAGGGTGAGAATAACATAGGCGAGTTTGTATTCTACTGGTTACAGGTTAGGGAAAGGAAGAATAATCAAGAGCTGGTCCTAGAATGCTTCTGTTATTATTATTTAGTCGGAGGAGTGGGTAATCGCTTTGTTTAAGCAACAAGAAGTAGCTATATATTGGAATTCCTCTCTTTAGAGTTGCTTTTGTAAAGAACTTATTGTTAAGAACTTATTTGCTATTATGAACACGGTTAGAACTGGAGTAGTGTCAGTGCAGGTCTCACTAGCAGGATATTTAGTTTCTTGTCTTAATTGTTATGAAAGGATAAAAGAAAAAGAATACCGCAATTTATATATCTAATTATCTCATTTATCAATATGCTTTTATCTGTTATAACTAAAGAAGCAGTCAATTCAATAGTTCTTACGATGACGACGTTGTAGATAATAATTCTGCTACCGATTGATATTCTTTACTGTTCTCTTCACTGCAGGGCTATGCACTTCTTTGCGTAGGTTTTCCAACCTCAGATGTTGAAGTAGAAACTCAAGATGAGGATGAGGTATTGTTTCAATTTTCAAGTTAAGAACTGAAGCATATTTATTTAGTTTTACAATTAGGATGCTTGTCAAGTCTATTTTCTCCTTGTAGCTCTTTCAATGAGCCTAATTTGCATATTGGCCAATCATGAACTAAAGTTGAAATTGGTTAAACCAAAAGTTCTGTTTTTCTGATCTAATTTAATATGTTGGACATTTTGGAGTGCTATGATCATTTTTCATGCAAAGATTCTCGTGATAGAGTAATGGGAGACATCACTCCAAGATTTGAAGTTCAAAACATGAAAATTTTTTTGCTGTGTTTGAGGCTTTCCCTTTAAACAATCCACTACACATGCAGGTATATTGGCTTCAATTTGGAAGATATTTTGCTCGGGGGCCAATTGTAAGTTCTTTATTTAAATCTATCAAAATTTACTGGGAGATGACCATATTGGAATTAATAAAAAAGGGAAAAATAAATTAAAATAATCTTTTTTGCAAGTTATATTAAACAATTTATTAAATTATCCAGGAGAGAGATGACTATGCTCTAGAGTTGGCCATGGCTGATGAGTAA ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCTTTCCGGAGATTTCTCTCGACAAATCGGAACCGTCTCTTTCCCGACATCTTGAAATGCCGCCGAAAAACGACCTCAACTGAGCTCCAGGCAGCTGTCGACGTCGCCGCTCGGACTGACAACGGTTATCCTTCAATTCCGACTCATAAGGTCACCGTTCACGATAGGGAGAGAGGCGTTGTTCATGAGTTCGTTGTTCCTGAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCATTTGCTTGCAGGCACGAACTTATTGTTAAGAACTTATTTGCTATTATGAACACGGTTAGAACTGGAGTAGTGTCAGTGCAGGGCTATGCACTTCTTTGCGTAGGTTTTCCAACCTCAGATGTTGAAGTAGAAACTCAAGATGAGGATGAGGAGAGAGATGACTATGCTCTAGAGTTGGCCATGGCTGATGAGTAA ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCTTTCCGGAGATTTCTCTCGACAAATCGGAACCGTCTCTTTCCCGACATCTTGAAATGCCGCCGAAAAACGACCTCAACTGAGCTCCAGGCAGCTGTCGACGTCGCCGCTCGGACTGACAACGGTTATCCTTCAATTCCGACTCATAAGGTCACCGTTCACGATAGGGAGAGAGGCGTTGTTCATGAGTTCGTTGTTCCTGAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCATTTGCTTGCAGGCACGAACTTATTGTTAAGAACTTATTTGCTATTATGAACACGGTTAGAACTGGAGTAGTGTCAGTGCAGGGCTATGCACTTCTTTGCGTAGGTTTTCCAACCTCAGATGTTGAAGTAGAAACTCAAGATGAGGATGAGGAGAGAGATGACTATGCTCTAGAGTTGGCCATGGCTGATGAGTAA MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNGYPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMNTVRTGVVSVQGYALLCVGFPTSDVEVETQDEDEERDDYALELAMADE Homology
BLAST of HG10012251 vs. NCBI nr
Match: XP_038888790.1 (ferredoxin C 2, chloroplastic [Benincasa hispida]) HSP 1 Score: 253.8 bits (647), Expect = 1.0e-63 Identity = 140/189 (74.07%), Postives = 147/189 (77.78%), Query Frame = 0
BLAST of HG10012251 vs. NCBI nr
Match: XP_022972000.1 (uncharacterized protein LOC111470650 [Cucurbita maxima] >XP_022972001.1 uncharacterized protein LOC111470650 [Cucurbita maxima]) HSP 1 Score: 248.8 bits (634), Expect = 3.2e-62 Identity = 137/189 (72.49%), Postives = 144/189 (76.19%), Query Frame = 0
BLAST of HG10012251 vs. NCBI nr
Match: XP_022952427.1 (uncharacterized protein LOC111455118 [Cucurbita moschata] >XP_022952429.1 uncharacterized protein LOC111455118 [Cucurbita moschata] >XP_022952430.1 uncharacterized protein LOC111455118 [Cucurbita moschata]) HSP 1 Score: 246.5 bits (628), Expect = 1.6e-61 Identity = 136/189 (71.96%), Postives = 144/189 (76.19%), Query Frame = 0
BLAST of HG10012251 vs. NCBI nr
Match: KAG6571846.1 (Ferredoxin C 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 245.4 bits (625), Expect = 3.6e-61 Identity = 135/189 (71.43%), Postives = 144/189 (76.19%), Query Frame = 0
BLAST of HG10012251 vs. NCBI nr
Match: XP_023511494.1 (uncharacterized protein LOC111776305 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023511495.1 uncharacterized protein LOC111776305 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023511496.1 uncharacterized protein LOC111776305 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 243.8 bits (621), Expect = 1.0e-60 Identity = 135/189 (71.43%), Postives = 144/189 (76.19%), Query Frame = 0
BLAST of HG10012251 vs. ExPASy Swiss-Prot
Match: Q9C7Y4 (Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC2 PE=2 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.3e-34 Identity = 91/189 (48.15%), Postives = 111/189 (58.73%), Query Frame = 0
BLAST of HG10012251 vs. ExPASy Swiss-Prot
Match: P0A3C7 (Ferredoxin-1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=petF PE=1 SV=2) HSP 1 Score: 58.5 bits (140), Expect = 8.1e-08 Identity = 34/95 (35.79%), Postives = 48/95 (50.53%), Query Frame = 0
BLAST of HG10012251 vs. ExPASy Swiss-Prot
Match: P0A3C8 (Ferredoxin-1 OS=Nostoc sp. (strain ATCC 29151 / PCC 7119) OX=1168 GN=petF PE=1 SV=2) HSP 1 Score: 58.5 bits (140), Expect = 8.1e-08 Identity = 34/95 (35.79%), Postives = 48/95 (50.53%), Query Frame = 0
BLAST of HG10012251 vs. ExPASy Swiss-Prot
Match: P00253 (Ferredoxin OS=Desmonostoc muscorum OX=1179 PE=1 SV=2) HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07 Identity = 33/95 (34.74%), Postives = 48/95 (50.53%), Query Frame = 0
BLAST of HG10012251 vs. ExPASy Swiss-Prot
Match: P00248 (Ferredoxin OS=Mastigocladus laminosus OX=83541 GN=petF PE=1 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06 Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 0
BLAST of HG10012251 vs. ExPASy TrEMBL
Match: A0A6J1I4R5 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111470650 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62 Identity = 137/189 (72.49%), Postives = 144/189 (76.19%), Query Frame = 0
BLAST of HG10012251 vs. ExPASy TrEMBL
Match: A0A6J1GKE0 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111455118 PE=3 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 7.7e-62 Identity = 136/189 (71.96%), Postives = 144/189 (76.19%), Query Frame = 0
BLAST of HG10012251 vs. ExPASy TrEMBL
Match: A0A6J1ESD7 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111437299 PE=3 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60 Identity = 135/189 (71.43%), Postives = 142/189 (75.13%), Query Frame = 0
BLAST of HG10012251 vs. ExPASy TrEMBL
Match: A0A5A7TAG8 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001210 PE=3 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.8e-59 Identity = 132/189 (69.84%), Postives = 142/189 (75.13%), Query Frame = 0
BLAST of HG10012251 vs. ExPASy TrEMBL
Match: A0A1S3CQF2 (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103503526 PE=3 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.8e-59 Identity = 132/189 (69.84%), Postives = 142/189 (75.13%), Query Frame = 0
BLAST of HG10012251 vs. TAIR 10
Match: AT1G32550.1 (2Fe-2S ferredoxin-like superfamily protein ) HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35 Identity = 91/189 (48.15%), Postives = 111/189 (58.73%), Query Frame = 0
BLAST of HG10012251 vs. TAIR 10
Match: AT1G32550.2 (2Fe-2S ferredoxin-like superfamily protein ) HSP 1 Score: 134.8 bits (338), Expect = 6.3e-32 Identity = 91/205 (44.39%), Postives = 111/205 (54.15%), Query Frame = 0
BLAST of HG10012251 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 ) HSP 1 Score: 44.7 bits (104), Expect = 8.6e-05 Identity = 27/84 (32.14%), Postives = 39/84 (46.43%), Query Frame = 0
BLAST of HG10012251 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 ) HSP 1 Score: 42.0 bits (97), Expect = 5.6e-04 Identity = 23/74 (31.08%), Postives = 37/74 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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