HG10012251 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012251
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ferredoxin
Location	Chr01: 19410144 .. 19412920 (+)
RNA-Seq Expression	HG10012251
Synteny	HG10012251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCTTTCCGGAGATTTCTCTCGACAAATCGGAACCGTCTCTTTCCCGACATCTTGAAATGCCGCCGAAAAACGACCTCAACTGAGCTCCAGGCAGCTGTCGACGTCGCCGCTCGGACTGACAACGGTTATCCTTCAATTCCGACTCATAAGGTCACCGTTCACGATAGGGAGAGAGGCGTTGTTCATGAGTTCGTTGTTCCTGAGGTACGGCATCATTTTCAGAAATGTAAAGAACATAAGTCCTTTTTCTTTTTATTTAATTTTGTTTTACTTCGTTGAAATTTCTTTTTTCGCCTCTTGAGCGAGTTTTCCAATTTTTTAGAATCGATATAACGCGTTCCTCCTCGGTTACAGATTGTATGATCTGTCTGATTATAAATTGTTTAGAGTTTTGGGAATTCGTTGGGAATTCGAAGTTCACAACATCTTTTCACTTTTAGTGGTTATGACTTATTGTGGCGTGGGTGATCAATTTTGCAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCATTTGCTTGCAGGCACGGTATTGTTCCCTAATTCACCAATTATTGATGAACTTTTCACATTCATCTTCCAATTCATGTTTAGAAATTATTTCAATGGGTAACACCATTGATAATAGAATGTATTGGCGTCGAATCAGTAATTTCACTTGCCTGCTAGTGACCTTTGTCATTGAAAGGCTGAAATTTGTCATAAAAATTTGCAGTTACTTCTTAAGATCGTGGACTTATTAACCCATAGACTTATTTTTATTTTGTATCCTATGGACAATGGTAAGCATAGGCATGAAAATGGGATTCTAATGCATGTCATTTTCAATAAATTAAGCACCACGACTTGAAAAAAGTACACACACATCTATAGAAAATCTATCTATCTGTCTATCTATCTATACTTTCGATAGATTTCAATGATTTAGCTGCATTAGGTGCCATGTCAAAGAATGTAACTGCCTGTTCATGGTCACAGCTGTGTAAAAAAACCAAATATCAGAATGGTTTACGACCAGATAAAAATCATTTACACTGAAAAAAAAAAAAAAAAAAAAAACCCTGCCCTTCTTTCGACTGATACTTCCTGTAATAGGGCCATTTTCTGATTCCTTTTGATCTCCATTGTTGGTACATATGCCATGTTCTGAAAATATTTGTTTGATGACAGGTTGTTGCACTAGTTGTGCTGTTCGAATTAAATCAGGCGAAATTAGACAGCCAGAAGCCCTTGGAATATCTGCAGAGTTGAAATCAAAGGCAATTTGTTGTACTTGTTTCTAGACTTACTATTATCATTATTATTTGAATAAATTGCTATCATATGAAAAGGCTGCTGTTTTATTTTAGTGTTTTCCACTTAGAAATCACATAATTTCTCTGTTGAATTCTCTTCAATATGAATATCGGTTCATTTCCTGGGGGAAAACCATGAAGCAAAATCTGAGGTTATGCATTGTGATGCTTCAGTAAAATAAAACTATAACTGCAACTGCTCATTCTAGATATGAAGTTTGAGTTTGCGATCTTAGTTTTTACCAGGTGAGCATGGTAAGCTTATTTAGTGTAAATTTGTCTAGCTGGTATGTTTGAAGCAACTCCTGCTCATTGAGGGTGAGAATAACATAGGCGAGTTTGTATTCTACTGGTTACAGGTTAGGGAAAGGAAGAATAATCAAGAGCTGGTCCTAGAATGCTTCTGTTATTATTATTTAGTCGGAGGAGTGGGTAATCGCTTTGTTTAAGCAACAAGAAGTAGCTATATATTGGAATTCCTCTCTTTAGAGTTGCTTTTGTAAAGAACTTATTGTTAAGAACTTATTTGCTATTATGAACACGGTTAGAACTGGAGTAGTGTCAGTGCAGGTCTCACTAGCAGGATATTTAGTTTCTTGTCTTAATTGTTATGAAAGGATAAAAGAAAAAGAATACCGCAATTTATATATCTAATTATCTCATTTATCAATATGCTTTTATCTGTTATAACTAAAGAAGCAGTCAATTCAATAGTTCTTACGATGACGACGTTGTAGATAATAATTCTGCTACCGATTGATATTCTTTACTGTTCTCTTCACTGCAGGGCTATGCACTTCTTTGCGTAGGTTTTCCAACCTCAGATGTTGAAGTAGAAACTCAAGATGAGGATGAGGTATTGTTTCAATTTTCAAGTTAAGAACTGAAGCATATTTATTTAGTTTTACAATTAGGATGCTTGTCAAGTCTATTTTCTCCTTGTAGCTCTTTCAATGAGCCTAATTTGCATATTGGCCAATCATGAACTAAAGTTGAAATTGGTTAAACCAAAAGTTCTGTTTTTCTGATCTAATTTAATATGTTGGACATTTTGGAGTGCTATGATCATTTTTCATGCAAAGATTCTCGTGATAGAGTAATGGGAGACATCACTCCAAGATTTGAAGTTCAAAACATGAAAATTTTTTTGCTGTGTTTGAGGCTTTCCCTTTAAACAATCCACTACACATGCAGGTATATTGGCTTCAATTTGGAAGATATTTTGCTCGGGGGCCAATTGTAAGTTCTTTATTTAAATCTATCAAAATTTACTGGGAGATGACCATATTGGAATTAATAAAAAAGGGAAAAATAAATTAAAATAATCTTTTTTGCAAGTTATATTAAACAATTTATTAAATTATCCAGGAGAGAGATGACTATGCTCTAGAGTTGGCCATGGCTGATGAGTAA

mRNA sequence

ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCTTTCCGGAGATTTCTCTCGACAAATCGGAACCGTCTCTTTCCCGACATCTTGAAATGCCGCCGAAAAACGACCTCAACTGAGCTCCAGGCAGCTGTCGACGTCGCCGCTCGGACTGACAACGGTTATCCTTCAATTCCGACTCATAAGGTCACCGTTCACGATAGGGAGAGAGGCGTTGTTCATGAGTTCGTTGTTCCTGAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCATTTGCTTGCAGGCACGAACTTATTGTTAAGAACTTATTTGCTATTATGAACACGGTTAGAACTGGAGTAGTGTCAGTGCAGGGCTATGCACTTCTTTGCGTAGGTTTTCCAACCTCAGATGTTGAAGTAGAAACTCAAGATGAGGATGAGGAGAGAGATGACTATGCTCTAGAGTTGGCCATGGCTGATGAGTAA

Coding sequence (CDS)

ATGGACGTTCTTCTTCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCTTTCCGGAGATTTCTCTCGACAAATCGGAACCGTCTCTTTCCCGACATCTTGAAATGCCGCCGAAAAACGACCTCAACTGAGCTCCAGGCAGCTGTCGACGTCGCCGCTCGGACTGACAACGGTTATCCTTCAATTCCGACTCATAAGGTCACCGTTCACGATAGGGAGAGAGGCGTTGTTCATGAGTTCGTTGTTCCTGAGGATCAGTACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCATTTGCTTGCAGGCACGAACTTATTGTTAAGAACTTATTTGCTATTATGAACACGGTTAGAACTGGAGTAGTGTCAGTGCAGGGCTATGCACTTCTTTGCGTAGGTTTTCCAACCTCAGATGTTGAAGTAGAAACTCAAGATGAGGATGAGGAGAGAGATGACTATGCTCTAGAGTTGGCCATGGCTGATGAGTAA

Protein sequence

MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNGYPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMNTVRTGVVSVQGYALLCVGFPTSDVEVETQDEDEERDDYALELAMADE

Homology

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BLAST of HG10012251 vs. NCBI nr
Match: XP_038888790.1 (ferredoxin C 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 1.0e-63
Identity = 140/189 (74.07%), Postives = 147/189 (77.78%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           MDVLLPCTSF SVNLKPESFR+FLSTNRNR F DILKCRRKTTSTELQAAVDVAARTD+G
Sbjct: 1   MDVLLPCTSFHSVNLKPESFRKFLSTNRNRRFSDILKCRRKTTSTELQAAVDVAARTDDG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
            PSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRH         I + 
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  +GYALLCVGFPTSDVEVETQDEDE               ERDDY
Sbjct: 121 EIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

[Close]

BLAST of HG10012251 vs. NCBI nr
Match: XP_022972000.1 (uncharacterized protein LOC111470650 [Cucurbita maxima] >XP_022972001.1 uncharacterized protein LOC111470650 [Cucurbita maxima])

HSP 1 Score: 248.8 bits (634), Expect = 3.2e-62
Identity = 137/189 (72.49%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           MDVLLPCTSFRSVNLKP SFRRF+STNRN  F DILKCRRKTTS ELQAAVDVA +TDNG
Sbjct: 1   MDVLLPCTSFRSVNLKPNSFRRFVSTNRNGRFSDILKCRRKTTSAELQAAVDVAVQTDNG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
            PSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRH         I + 
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  +GYALLCVGFPTSDVEVETQDEDE               ERDDY
Sbjct: 121 QIRQPEALGISAELKAKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

[Close]

BLAST of HG10012251 vs. NCBI nr
Match: XP_022952427.1 (uncharacterized protein LOC111455118 [Cucurbita moschata] >XP_022952429.1 uncharacterized protein LOC111455118 [Cucurbita moschata] >XP_022952430.1 uncharacterized protein LOC111455118 [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 1.6e-61
Identity = 136/189 (71.96%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           MDVLLPCTSFRSVNLKP SFRRF+STNRN  F DILKCRRKTTS ELQAAVDVA +T+NG
Sbjct: 1   MDVLLPCTSFRSVNLKPNSFRRFVSTNRNGRFSDILKCRRKTTSAELQAAVDVAVQTENG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
            PSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRH         I + 
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  +GYALLCVGFPTSDVEVETQDEDE               ERDDY
Sbjct: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

[Close]

BLAST of HG10012251 vs. NCBI nr
Match: KAG6571846.1 (Ferredoxin C 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 245.4 bits (625), Expect = 3.6e-61
Identity = 135/189 (71.43%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           MDVLLPCTSFRSVNLKP SFR+F+STNRN  F DILKCRRKTTS ELQAAVDVA +T+NG
Sbjct: 186 MDVLLPCTSFRSVNLKPNSFRKFVSTNRNGRFSDILKCRRKTTSAELQAAVDVAVQTENG 245

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
            PSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRH         I + 
Sbjct: 246 SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 305

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  +GYALLCVGFPTSDVEVETQDEDE               ERDDY
Sbjct: 306 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 365

[Close]

BLAST of HG10012251 vs. NCBI nr
Match: XP_023511494.1 (uncharacterized protein LOC111776305 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023511495.1 uncharacterized protein LOC111776305 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023511496.1 uncharacterized protein LOC111776305 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 1.0e-60
Identity = 135/189 (71.43%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           MDVLLPCTSFRSVNLKP SFRRF+STNRN  F DILKCRRKTTS+ELQAAV VA +TD+G
Sbjct: 1   MDVLLPCTSFRSVNLKPNSFRRFVSTNRNGRFSDILKCRRKTTSSELQAAVGVAVQTDSG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
            PSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRH         I + 
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  +GYALLCVGFPTSDVEVETQDEDE               ERDDY
Sbjct: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

[Close]

BLAST of HG10012251 vs. ExPASy Swiss-Prot
Match: Q9C7Y4 (Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC2 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.3e-34
Identity = 91/189 (48.15%), Postives = 111/189 (58.73%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           M ++LPCT   S+  K     R   TN  R           T + E +  V+V+  +D G
Sbjct: 1   MALILPCTFCTSLQKKNFPINRRYITNFRR--------GATTATCEFRIPVEVSTPSDRG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
              +P+HKVTVHDR+RGVVHEF VPEDQYILH+AE+Q+ISLPFACRH         + + 
Sbjct: 61  SLVVPSHKVTVHDRQRGVVHEFEVPEDQYILHSAESQNISLPFACRHGCCTSCAVRVKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  QGYALLCVGFPTSD+EVETQDEDE               ERDDY
Sbjct: 121 ELRQPQALGISAELKSQGYALLCVGFPTSDLEVETQDEDEVYWLQFGRYFARGPIERDDY 180

[Close]

BLAST of HG10012251 vs. ExPASy Swiss-Prot
Match: P0A3C7 (Ferredoxin-1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=petF PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 8.1e-08
Identity = 34/95 (35.79%), Postives = 48/95 (50.53%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACR--------HELIVKNLFAI 125
           T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR         +L+   +   
Sbjct: 3   TFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQS 62

Query: 126 MNTVRTGVVSVQGYALLCVGFPTSDVEVETQDEDE 153
             +         GY L CV +PTSDV ++T  E++
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEED 97

[Close]

BLAST of HG10012251 vs. ExPASy Swiss-Prot
Match: P0A3C8 (Ferredoxin-1 OS=Nostoc sp. (strain ATCC 29151 / PCC 7119) OX=1168 GN=petF PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 8.1e-08
Identity = 34/95 (35.79%), Postives = 48/95 (50.53%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACR--------HELIVKNLFAI 125
           T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR         +L+   +   
Sbjct: 3   TFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQS 62

Query: 126 MNTVRTGVVSVQGYALLCVGFPTSDVEVETQDEDE 153
             +         GY L CV +PTSDV ++T  E++
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEED 97

[Close]

BLAST of HG10012251 vs. ExPASy Swiss-Prot
Match: P00253 (Ferredoxin OS=Desmonostoc muscorum OX=1179 PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07
Identity = 33/95 (34.74%), Postives = 48/95 (50.53%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACR--------HELIVKNLFAI 125
           T KVT+ +   G  HE  VP+D+YIL  AE +   LPF+CR         +L+   +   
Sbjct: 3   TFKVTLINEAEGTKHEIEVPDDEYILDAAEEEGYDLPFSCRAGACSTCAGKLVSGTVDQS 62

Query: 126 MNTVRTGVVSVQGYALLCVGFPTSDVEVETQDEDE 153
             +         GY L CV +PTSDV ++T  E++
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEED 97

[Close]

BLAST of HG10012251 vs. ExPASy Swiss-Prot
Match: P00248 (Ferredoxin OS=Mastigocladus laminosus OX=83541 GN=petF PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06
Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 0


Query: 66  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACR--------HELIVKNLFAI 125
           T+KVT+ +   G+     VP+DQYIL  AE   I LP++CR         +LI   +   
Sbjct: 3   TYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQS 62

Query: 126 MNTVRTGVVSVQGYALLCVGFPTSDVEVETQDEDE 153
             +         GY L CV +PTSD  +ET  E+E
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEE 97

[Close]

BLAST of HG10012251 vs. ExPASy TrEMBL
Match: A0A6J1I4R5 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111470650 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62
Identity = 137/189 (72.49%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           MDVLLPCTSFRSVNLKP SFRRF+STNRN  F DILKCRRKTTS ELQAAVDVA +TDNG
Sbjct: 1   MDVLLPCTSFRSVNLKPNSFRRFVSTNRNGRFSDILKCRRKTTSAELQAAVDVAVQTDNG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
            PSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRH         I + 
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  +GYALLCVGFPTSDVEVETQDEDE               ERDDY
Sbjct: 121 QIRQPEALGISAELKAKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

[Close]

BLAST of HG10012251 vs. ExPASy TrEMBL
Match: A0A6J1GKE0 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111455118 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.7e-62
Identity = 136/189 (71.96%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           MDVLLPCTSFRSVNLKP SFRRF+STNRN  F DILKCRRKTTS ELQAAVDVA +T+NG
Sbjct: 1   MDVLLPCTSFRSVNLKPNSFRRFVSTNRNGRFSDILKCRRKTTSAELQAAVDVAVQTENG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
            PSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRH         I + 
Sbjct: 61  SPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  +GYALLCVGFPTSDVEVETQDEDE               ERDDY
Sbjct: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

[Close]

BLAST of HG10012251 vs. ExPASy TrEMBL
Match: A0A6J1ESD7 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111437299 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 135/189 (71.43%), Postives = 142/189 (75.13%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           MDVLLPCTSFRSVNLKPES R FLSTNRNR F D+LKCRRKT STELQA VDVA RTD+G
Sbjct: 1   MDVLLPCTSFRSVNLKPESSRSFLSTNRNRRFSDLLKCRRKTISTELQATVDVAGRTDDG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
             SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRH         I + 
Sbjct: 61  SASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  +GYALLCVGFPTSDVEVETQDEDE               ERDDY
Sbjct: 121 QIRQPEALGISAELKSKGYALLCVGFPTSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

[Close]

BLAST of HG10012251 vs. ExPASy TrEMBL
Match: A0A5A7TAG8 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001210 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.8e-59
Identity = 132/189 (69.84%), Postives = 142/189 (75.13%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           MDVLLP TSFR+VN+K ESFR F STNRNR F D LKCRRKTTSTELQAAVDVAAR DNG
Sbjct: 1   MDVLLPSTSFRTVNMKSESFRTFFSTNRNRRFSDTLKCRRKTTSTELQAAVDVAARADNG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
            PSIP+HKVTVHDRERGVVHEFVVPEDQYILHTAEAQSI+LPFACRH         I + 
Sbjct: 61  SPSIPSHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSITLPFACRHGCCTSCAVRIKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  +GYALLCVGFP+SDVEVETQDEDE               ERDDY
Sbjct: 121 EIRQPEALGISAELKSKGYALLCVGFPSSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

[Close]

BLAST of HG10012251 vs. ExPASy TrEMBL
Match: A0A1S3CQF2 (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103503526 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.8e-59
Identity = 132/189 (69.84%), Postives = 142/189 (75.13%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           MDVLLP TSFR+VN+K ESFR F STNRNR F D LKCRRKTTSTELQAAVDVAAR DNG
Sbjct: 1   MDVLLPSTSFRTVNMKSESFRTFFSTNRNRRFSDTLKCRRKTTSTELQAAVDVAARADNG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
            PSIP+HKVTVHDRERGVVHEFVVPEDQYILHTAEAQSI+LPFACRH         I + 
Sbjct: 61  SPSIPSHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSITLPFACRHGCCTSCAVRIKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  +GYALLCVGFP+SDVEVETQDEDE               ERDDY
Sbjct: 121 EIRQPEALGISAELKSKGYALLCVGFPSSDVEVETQDEDEVYWLQFGRYFARGPIERDDY 180

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BLAST of HG10012251 vs. TAIR 10
Match: AT1G32550.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35
Identity = 91/189 (48.15%), Postives = 111/189 (58.73%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           M ++LPCT   S+  K     R   TN  R           T + E +  V+V+  +D G
Sbjct: 1   MALILPCTFCTSLQKKNFPINRRYITNFRR--------GATTATCEFRIPVEVSTPSDRG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHELIVKNLFAIMN- 120
              +P+HKVTVHDR+RGVVHEF VPEDQYILH+AE+Q+ISLPFACRH         + + 
Sbjct: 61  SLVVPSHKVTVHDRQRGVVHEFEVPEDQYILHSAESQNISLPFACRHGCCTSCAVRVKSG 120

Query: 121 TVR-------TGVVSVQGYALLCVGFPTSDVEVETQDEDE---------------ERDDY 167
            +R       +  +  QGYALLCVGFPTSD+EVETQDEDE               ERDDY
Sbjct: 121 ELRQPQALGISAELKSQGYALLCVGFPTSDLEVETQDEDEVYWLQFGRYFARGPIERDDY 180

[Close]

BLAST of HG10012251 vs. TAIR 10
Match: AT1G32550.2 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 6.3e-32
Identity = 91/205 (44.39%), Postives = 111/205 (54.15%), Query Frame = 0


Query: 1   MDVLLPCTSFRSVNLKPESFRRFLSTNRNRLFPDILKCRRKTTSTELQAAVDVAARTDNG 60
           M ++LPCT   S+  K     R   TN  R           T + E +  V+V+  +D G
Sbjct: 1   MALILPCTFCTSLQKKNFPINRRYITNFRR--------GATTATCEFRIPVEVSTPSDRG 60

Query: 61  YPSIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRH------------- 120
              +P+HKVTVHDR+RGVVHEF   EDQYILH+AE+Q+ISLPFACRH             
Sbjct: 61  SLVVPSHKVTVHDRQRGVVHEF---EDQYILHSAESQNISLPFACRHGCCTSCAVRVKSG 120

Query: 121 ELIVKNLFAIMNTVRTGVVS-----------VQGYALLCVGFPTSDVEVETQDEDE---- 167
           EL       I   +++  +S           + GYALLCVGFPTSD+EVETQDEDE    
Sbjct: 121 ELRQPQALGISAELKSQRISSLDLIQCQKTYLTGYALLCVGFPTSDLEVETQDEDEVYWL 180

[Close]

BLAST of HG10012251 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 44.7 bits (104), Expect = 8.6e-05
Identity = 27/84 (32.14%), Postives = 39/84 (46.43%), Query Frame = 0


Query: 77  GVVHEFVVPEDQYILHTAEAQSISLPFACR--------HELIVKNLFAIMNTVRTGVVSV 136
           G   EF V +DQYIL  AE   + LP++CR         +++  N+     +        
Sbjct: 70  GQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLE 129

Query: 137 QGYALLCVGFPTSDVEVETQDEDE 153
           +GY L CV +P SD  + T  E E
Sbjct: 130 KGYVLTCVAYPQSDCVIHTHKETE 153

[Close]

BLAST of HG10012251 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 42.0 bits (97), Expect = 5.6e-04
Identity = 23/74 (31.08%), Postives = 37/74 (50.00%), Query Frame = 0


Query: 86  EDQYILHTAEAQSISLPFACR--------HELIVKNLFAIMNTVRTGVVSVQGYALLCVG 145
           ED Y+L  AE   + LP++CR         +++  ++     +        +GY L CV 
Sbjct: 72  EDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVA 131

Query: 146 FPTSDVEVETQDED 152
           +PTSDV +ET  E+
Sbjct: 132 YPTSDVVIETHKEE 145

The following BLAST results are available for this feature:

BLAST of HG10012251 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888790.1	1.0e-63	74.07	ferredoxin C 2, chloroplastic [Benincasa hispida]	[more]
XP_022972000.1	3.2e-62	72.49	uncharacterized protein LOC111470650 [Cucurbita maxima] >XP_022972001.1 uncharac...	[more]
XP_022952427.1	1.6e-61	71.96	uncharacterized protein LOC111455118 [Cucurbita moschata] >XP_022952429.1 unchar...	[more]
KAG6571846.1	3.6e-61	71.43	Ferredoxin C 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023511494.1	1.0e-60	71.43	uncharacterized protein LOC111776305 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of HG10012251 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7Y4	2.3e-34	48.15	Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC2 PE=2 SV=1	[more]
P0A3C7	8.1e-08	35.79	Ferredoxin-1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 G...	[more]
P0A3C8	8.1e-08	35.79	Ferredoxin-1 OS=Nostoc sp. (strain ATCC 29151 / PCC 7119) OX=1168 GN=petF PE=1 S...	[more]
P00253	1.8e-07	34.74	Ferredoxin OS=Desmonostoc muscorum OX=1179 PE=1 SV=2	[more]
P00248	1.5e-06	35.79	Ferredoxin OS=Mastigocladus laminosus OX=83541 GN=petF PE=1 SV=2	[more]

BLAST of HG10012251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4R5	1.6e-62	72.49	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111470650 PE=3 SV=1	[more]
A0A6J1GKE0	7.7e-62	71.96	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111455118 PE=3 SV=1	[more]
A0A6J1ESD7	1.5e-60	71.43	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111437299 PE=3 SV=1	[more]
A0A5A7TAG8	2.8e-59	69.84	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001210 PE=...	[more]
A0A1S3CQF2	2.8e-59	69.84	Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103503526 PE=3 SV=1	[more]

BLAST of HG10012251 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32550.1	1.6e-35	48.15	2Fe-2S ferredoxin-like superfamily protein	[more]
AT1G32550.2	6.3e-32	44.39	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	8.6e-05	32.14	ferredoxin 3	[more]
AT1G10960.1	5.6e-04	31.08	ferredoxin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 64..109 e-value: 8.0E-6 score: 27.3
None	No IPR available	PANTHER	PTHR43112:SF33	FERREDOXIN	coord: 38..152
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 38..152
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 69..146 e-value: 5.86975E-8 score: 45.8488
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 54..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012251.1	HG10012251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009536	plastid
molecular_function	GO:0051536	iron-sulfur cluster binding