HG10011768 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011768
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	SpoU_methylase domain-containing protein
Location	Chr01: 11056222 .. 11065801 (+)
RNA-Seq Expression	HG10011768
Synteny	HG10011768

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATGCTCCTGCGTTTCCTGGTCCTCAAATCTGAAACTCGGACCTTCCTTTTCCAAATTGAAGCTATCATCAATTAACCAAGCAGAGACCACCGATTTTGCTGGAAGAATTTCTCTTCCTTCTCACGTGAAAGCCATCACCAGCACCTCCAACCCTTTCGTTAAGCACTGCGTCAAACTTCGCTTCAGTTCCTCTTATCGCCACTTCCATGGCTCCGTCATTGTCGTCGGAGCTACTCCAATAAGGTTCTCTCTTAATCAGTTACTTTGCCCTCAATTTTTCTGGGTTCTGTTCATGATTGTGTTCCTGATTGAAAAATTAAATTAGTCCACGCGGGGTTTTATTTTTTGAATTTTTTTGTCGTTAAATTTCACTAGCTCTCGAGCAAGGGGCTCTAAACCCTTGAATTTCTTTTGCAAATCAACCATATGGGTTAATAAATTCTCTAACATGGGTTATTAGTACTTCGTCTCTCATGCTATTTTTCGTCCATACTATTCTAATTGCCCATTTCAGTTTTGTGTCCGGTGCTTTTTTGGTGAATGTTTTGAAGAATTGAGTTCTTGGAATCAAATCCTGTGTAATAGCAAGTTTGTGACTTAATATTTTTGAAGCACCCTTAAGCTTTATCTAGAGTTGTATTTGATTGTGACTGTTCTCTAATTGAACTATGAAGTACTTTCTGTTTTTTGAACTTTGGAAACTCGCTGCTGATTTGTAAAATGATAAATTGTTGGAGCCATGTAAAATTTGTGCTTTCCTGCAAGAATTTCAGCATAAATTCTGTCTTCTAAAGTCATATTTTGTCCTTGTGGTTACTCCGTTTAATCTATAGGTTACTCTCTTCATGGTTGGCAAGGAAGAAAATCCTATTTCTCTGTTGTGTGGATGCTTCCACATATTGCAGTTCATTTCTAGCTAGAATTGTTGAAAGTTTATGTGTGGTCTACTGGTGGTCGTATCTACTTCAATCATTTCGTGATAGATGTAATTTGTATATTCTAGTTCACTGTTTTTGGACCATGACAAACTTTATAAAATGGTGTTCCCATGAGAAAATTTACTATTACTTACATGAGATTAGATCTCCCTCCCCTTAGGAGTTCTAATTATGTATTTTATCAGGTCATCTTTTGTGGTAAAATGTTTTGCTCAACTTCATTTGGTTTGTATGCACTGACATCTAATTTAAGTCTCTTACAGGGAAATTTGCAAGTTTCAAGAGTCTCTGCATGGGATAGCTTGTATATTGGAGTGCCTACTTCTGCTAGATGACGTTGAGGTTCCTGAAGGACTAATTGATATATCTGTTCGTATTGTGCGGGTGAGCCCAACTGTGATGAAAAAGCTTTCTGGCATGCAATCAACAGAATCTATTGATGCAATTGCCCTCATGAGAATACCTGCCAGTTTTTGTAGTGTAGATGGCAATGAGAAAGAAGTAGATTTTAAAAGATGTTTTCCATCTCCGCATCGAATATTAGTCCTTGAGGGAATCCAGGTATTCTTTCATTTGGAGTGGAGCGAAGTCTTGTAATTTGCTGCATCTAATTTTCCTGTCTTTAAGTTGTTGCAAAATACTATATAGTTATCATTTCCCCCACTTCTCTCCATCCTCACTACTAAGACGATTTTTCTACCTTGTGCTGCCACTAGTCCACTGTGGTATGTCACTGAACACATTTACATCGTAATAGTTTTTCTGGACTCACCTATAAAGAGTGAATGAGTGGTCGTCCTCTTAACCTATGGTGCTTTGATGATGACCTTTATGCTTAGCGTTTGATGTTATAAAGTACTCACCTATATCCATTAGTTAATATGAGATGTACAAGTTCATCTTTGCTTGTTGCAGGACCCAGGCAATCTTGGTACATTAATCAGGTCCGCTTTGGCCTTCAAATGGGTAAGGAAAAATTCCACAAATTATTATTATCCTTCATTCTTTGACCTTTTCCCCCTGAACATGGTGAGGGCAACCAGGCAGGTTATATCACATAGTGTTCTTTGGCTTTCTATTTTCATTAAATTTCTCCATGGAGAAATTCGTCTGTCATGTGTTAATGTATTTTATTTTATTTGGATTTGATTTAATTTTTTTATTATTTTTTTACTTTTGTTTCTGGAAAATACGTTCTATAGATTTAGATCTTCTCAATAAGTTTGAAGAACCCTTCTTTGAACTCCAAAATCCAAATGTCAATGAGTGCTGATAGAATACTTCACCTTTCTAGTGTGAAATTGTGATAGGCCTCCAATTGTAAAAGTGATGTAAGGATAAGATGAGGAGTAACAAAACGTGACAAAATGTTTGTTATGTGTTGGCCCTCTAGGAATATTGTTAGTTAGGGGACTTGCGGTGTGGAGGCCTTTTATAGACCCCTTTGCTGATAGGGGAGGGGATCTATTTGGCTATCATTTGTATTTGGGTACTCTTATGAGAATTGGGAGAGATAAGGGAGCTCTTGAATCTTCCCCACTACTTTTGATAAATAAGATTGATGCTAAGGCCTATCAATTTTGGTATCAAAGCATTCGTTTCTAGAATGGTAGGAAAAATGGAAGGAGTTATAATGTCGGAAGAGAAAATGATGGAGATAGGTGTAAGTAGTTGGAACTTGAGTGCAAGATGGATTCTAGATTCTTTGAAGCTGACGAGAGTTGGGTGGTTGCAGAGGAGAAGGTGGATCTCCAATTTACACTGTTATGGGAGAAGATGAAGGCGATCATGAATCGAATGGAAGGTTGGATGAATTTGAAGAGACGGTCAACTTCTTCAGAGAGGATTGATAAGTGGAAAAAAGTGATGGAATAAGAATCGATTGAGCTTGCGAGTGAAGGACAAGAGCAAAGTTCTTTGGATAAGGAAGGAATTCATGCTCATAGTAATCATGAGGTTCCTCTATTTAATATGCGATTGAGTAAATTATTGGTACCCATTTTTAAGGGGGAAGAGGAAGAAAACGCAGATGGATTGCTACTACGCATGGAGAGGTATTTTGTTGTAAATTGATTGTCAAAGAGAGACAAGTTGGATGCGACAGTGTTGTGCTTGCGTTGCATTGGTACGAGTAGGAAGAGGATCAAAACTCGGTAGGTAGTTTGGATGAGTTTTGAAAGCTTTTGTTGGAGCAATTTTGACTGTCTGGTCATGGAGATAAGTACGCACGGTTGATGAAACTGCAACAAGAATTCATTGTACACGAGTATTGCTGGAGATTTGAGTAGTAATTGGCCGGTTGGATATTTGTTAGCGATGGAGTCTTGGAGAGTAAGTTTGTTTGTGGGCTAAGCGAAGAAATCCAAAGTGAAATGAAAATGAAAACTAATGGGCTTGAAGGCCAAGATGATGATCGCCCAATTAAATGAGGATGACCATCTTGGTTCAACAAAAAAAGAACAAAAATACGAGTGTTACTAGCCCAAAAGTGAAAAGTGGATGGCGTATTCTAGGTCAGGTTCAAGTGGGAGTAGCTGGTCACCATCAAGCATGATTATTAGCAGCCCTAATCAAGGAATGGGGGGTTTCCACATCTTTAAGGCCGACGCGTGATTTCGTTACAAAAGCGAGGGCCACAACATTGGGTTTTGTTAGGCTTGTGGTTGTGTTTTGTGCGGCTTTTGCTCTAATTTCTTGGTTTCGTCTCCCTCTGTTTTGGGGGCTTCCTTTCGGATGTGTGTTTTTTGTGTTGTCCTGTGTTACGGTGTTGTGGGGTGGGCTAGTCTATTTTTGGCTAGTTTCTTTGTGGTGTTTGGGCCGTTAGGGGTTTGTGGTTTGGTTCCTTGTGTGTTTGGTTTGTGTGATCTGGCCTCAGGCTGTGGAGCTCTCCTTGTTTAATATATTATCTTTTCCCAACAAAAATAAAATAAAATTGGGGTGGTCTATGTAGGGCCAAAAGGATCTTGCCTCCTACCATGACCATTGCTAAATCCTCCCATAGCATTTACCTCACGAAGTGTCCCTTGATGGACATGAGGGCAAACATCAGCAATATGCCCTGTCATTGAACATAGGGGTGAGCAAACAAAACCAAAAATCAGACCAAGCCGACTGAAACGGACCAAACCGACATCGGTCGACCAATTTAGTCAAAGATTCAATCGGAGTCGGTTTTCTGCAAATAAAAAAAGCGAACGTTGCCAGTCGGAGTGGTCGGAAAAGCATAATTCCAACCGACCGACCAAATTTTTTAATTATTGAGTGTGATATTTTAAAGCAATCAGCCCTTAATATACGTGTAATCCACCTTGATTCACGTAAGGTGGTTTTACTTTTTGTAAAAATAATTATTACTTTTTCTAAAAGTAATTATTACTTCTCTTTTCTCTCCCCCCATGTACATTTCTTATCCTTTTCATTTTATTTATTTATTTTATTTCCCTTTTGAAAATTAAGTGTTAGTGCAACTTCTCTTCTCTTTCCAATTTCCTTTTTAATTTTATTTATTTTATTTCTCTCTCCTAAATTAAGTGTTCTATCTTCTCTCTATCTCATTTCCTTCTTTCTCAAGTGTTTGGTTTTCTTTGTATTTTTTCTTCTTCTTTTTCATCTCCTTATTTTCTTCATCTCCTTTTAGTTTTCTTCTTATCTATTGTTCTACCTTTCTTCCTCCTTGTTCTTTTATTCTTCCTTTCAGTCAACCCTTTCATTTCTCATTTTCTTTGCCGGAGACTAAAAACCGACAAAATCGCCTAACTGACCAGTCGGCTGGTCGGCCGGTGTGGTTGTCTTCTTCGAAACCGATAAAACGCTAATAGACCACTTTTCGGTGTCACTGCCGAAAGAACCAATAAAAAATAATTTATAATACCAAATCCTACTACACTACTACTATGATGACGTAGCAACAGTAGTAAGTTCGGGTCGATCCGCAGGGAAGCACGAAATATGTTTCGTTAAGCTAATTCTCTTGTTACAACGGTAAATTTGGGGGCGGGGGTTGTGATAGGGATTGCATGAAAGTAAAGGCAGGAATGTAAAAGCAGCGGGTAAATGTAACTTAGGATTGGAAAATTCTAGTTTCGAGAGCAAGAGGGGATCCTATGCAATTTCGATCATCGACCTTTGATGTATGCACGACGACGCTACAAACAGTTGAAATATTCGATTGAACATGCATTCGATTCATGTATGCACAACGAATTACTCAGCCTAACCAAAATCAATGACGCTACAGATAGCTGAAATATTCGATTAAACCGAGAAAGCACCCTAATTATTAATTAATACTTAATCAAATTAGATGCTCAATTAACTGGGTTCGATAGCGTCCATAGAAATCTCACATCTACTCTAATCAATTATTAATTAAACTAAATGGTTTTAGTCCTATTGGGTTTGATAGCGTCCATATAGAATTAAACCATTTGCATTAGGATTAAAGGTTCCATTGTGTGATTAATTAATTTGGTAGCCTAATTGATTAACCAAATTATCTTTGAACCTAGTTAAAACATGCATTCTAGGTTAGCCATAAAATGCTTGATTAACTATTTGTTACTTAGGGTGATTTAAGCCAGACGAAGAACCAAAGACATCAAACAAGTCTAAATCAATTAACGAGGGTGACATACATCTATAAAGAAATAGTCATTCACAAACATGCATCTAGAGATTCACGAAGATTCAAAGAAGACAAATAGATATGCATTCAATTCAATCACCAAAAATCTCAAGAAAATTACATAGGGTTCTTGCTCCCAAAACTAGAGAAATCCTTACCTCAACATCTCATGGACAAGAAGAAGAGGGGGAGCTCCAATCCATGATTACAACCCAAAAGAATGTAAAAATCTAACCTAAAAGTGCTGAAAAATAAAGGGAGAAGAAGAAATTTAAGGTTCAATCCGCCTCCATCAAAACCAACTGAAAAACCCTAAAAGTGAAGAGGGATATTTATAAAATCGCGATCGCACTGTGGCGCCAAGCCCTAAATTGCCTTCTATCTGTAGGGCAAAGCCACAACATCGGGGTGGCACTGCGGTGGTGTGCCTCTGATGCGCGTGTTCTTTTGTTTGCCCAAATTCGGAGAGCTGGCGTCACGGTGCTGCTGCGTATCCATGGCTTCTGGAAAAAAAAACGCAGTGCATGGTGCCGACCTAGCGCAGTTGTGCTAGCCTCTTAGGGAAAAATGGTCTTTTCACGTCCTTTGAAGCCTCAAGTCCTCGGTATCACTCCCAATAACTCCAAATCCACCTTGAATGGCCCGTAATGCTCCAAAATGCATGATATGCTCGAGAATCTACAAAATAGACATTTAAATACATTATACCTAACAAACAAGTGAGATTAGAGACATATAAATAGTTCTTTTTGAGAGCTATCAAATGCCGACTGATAGTAATTGATGTGTCGGTGGTCGGCGGCGATTTTAGCCCAAAACCGATGCTAACCGACCGATAATCACCCTTAATTGAATAGACTCCACACACTTTGGCCGGTTGAGCTCTATCCAATGCCACTTGTTTTATCAAAGAAGCCAAGTTAGATATTTGAGTACGTGATTCATTGACCTCGGCATTAGATGTGATGTTCCTTGGAGCTCTCGTCCTAAATTGTTGGGAATTGTTCGCCATCGTATAGATAAGCATTCTAGCTTCTGAGGGAGTCTTATTCACTAGTGCATAATTGATGGTGCTTCTGTCATGTGGTAACAACCCTTCATAGAAATATTAGATCAATAGTTGGTCAAAAATTTGGTGATGGGGAAAACTAGCACAAATTCTCTTAAACCTTTCTCAATATCCACAAAGTGTTTCCCCTGAGATCTGGGTGATGCCATAGATCTCCTTCCTTATACTAGCGTGGAGGTTGAGAAAAAACTTTTCTAGAAACTGCTTTTCCTGGTCGGTCCAAGTTGTGATGCTCCCCAATGGTAAATAATAGAGCCAGTCCTTTGCATCGTCCTTCAAGAAAAACGGGAAGGCTCTCATATTCAACTATTCTTCAATGACTCCATGGGGCCTCATATCGTCGCACACGATGTGAAATTCTTTCAAGTGTTTGTGTGGGGTTGTCTCCTGCACGACCATGAAAACTAGGCAGTAAATGAACTAATCTAGGTTTAAACTCAAATATATTTGTCGTTTGAGGGTATGTGATGCACAACGGCTGTTGAGTCGTGTCAGGAGCTGCTAGATCCCTCAGGGTATGCTCGAGTATGCTATAATAGTCTATTCTTTTTCCACCAACTCTTCTTGTTGTGTGTCTTCAATACGGATTTGTTTGTTTTGGGCCACCTGTGCTTTTGCCTCCCTCCTGAGTCTCCTTTTCTCTCTGTCAATCTCTGCAACAACATCAAAAGAAATCGTAAGAACGTACAAGAAATCATAAACCTTTTAATTGAGAAATTACTAGGTTTCCCGGCAACAATGCCAAATAAATTCCGTGCCTACTTAAATTTGTAATATGAGTAGTACAGGTCGATCCACAGAGAACTGATGAGTTTCTCAGATAGAATGCTTAAAGTCCCGAAGTAATCGGAGGAAAAGGGGGGGGGGGGGTGATTGATTATGCTTATGAATTTAGAAGTGCTTTGAATGTAAAAGTTGTTGAAAAGTCTAACTGTAGACAATTGTGAACGATTGAATGTTGAGAAAATACTGTTGATTAAAATGCCTGGCTCAGGGCTTTTTGAGGTTCCCCAAATTGTTTACTTGATCATCGAATCGTGAGACTAATTCCTATTTCTTGTCTAAGCCTAGCCAATATGTTTAATAATGCTAAACGATGTCCCAAGTACCTAATTAGTCAATATGATTAGATGAAACACATGCTAAACACTTGAGCTAACCGCATTAAGATTAATGGATTGTGCTAGGACGAATTTCCAATAGGTAATGCCTAATTGATCATCCAATATGATTCTCCTCTTGGTTAATTAATCAATGCTAATTGGATGGTTGTCGAACAATCTACAAGTTAATTTAACCTTTTGCTACTTTGTGATTTAGGGATTTATCAATCATGGATTAAGTTTAAATCTATAGTGATCGATCATATAAACTTCACTAGTTTGTCAGACAATCTCAAGAAAATACAATCATGAAGATTTTTAGCAAGATGAAAATCCGAAGACAAGATCAAAATTAGATGAATTGAGCAAAAATCTCACAAGTTCACATCAATGGGGAAAAATCGCTAAAACCCAAGCTAGTACTTACATATGTAGCCTATAATCATCTTCATAATCAATGGAGAATACAAAGAGTGCATTAAAATACAAGCCAAATTGAGAAAGAACAGAAGGTGAAATATTAGTGGGAGAATCGAGGAAATTAGAATATGATGACCCAGGCAGCTAAAAATGTATTTTAATTGTTGATGGTGCTGCTCGCAGCACTGCATCCCTATGGTCTAGTAATTGAAGCATTGCACACAGTACTGCAGCGCGCGTGTAGTTATCCGGTTTGCGATGGCATTGCAGTGTCATAGGATAGCGCTGCAGCGTTTTCTTCAGATGCATCCACTGTAAAGAGCGCCGCGGGGCACTGCCACGCTCATGCCTGGCGTTGCTTATGTTTATGGCGCCGCACGCAAGTGCTCAATGGCGCTACAGCACCAGCCCTCAAGGGTATTTTTGTAATTCTTCCCTTCTTTGTCCGATATATGCTTTAAGGCTCCCTTTTGGTCCATTTAAGCCCGATTTTTTCCCTATGGGTCCATTCTACCTTTTTTACGCCTGAGACCTATAAAATCATGAAATAAACATATAAAATCAAAGAACGAGTCTAAATTAAGTTTAGTGAGATAGCACGTTTTAGGTGCAATCAAGAAGCTCTTGAATCTTCTCCATTGGTGTTGATAAAAAAGATTAAGGCCAAGGCCTATCAGATTGCTGATAGGATTAGGTATGAGATATTATGTTTAAGAATGTGATCTTTTCTTAACTATATGATGAACCATTGCTGGTGTGTTTGCTGAAGTAATAGATCTCATATTCTTTTTTATGCATCCTTTTCCTATGGTGTGTTGTTTGGATAAAATCTTGAAACCTTTGAGCTTGTATCGGTGTGTTCTAAAATTTGTTATTAGGGTGTATCTTGGCTATTGTTTCGATTTTATATTCCTTATTAAAGAATTTTACTTTATTATAAAAGATAGATTCAAGAACTTTTAGAACTCCATTTTCTCACAAGCTTTTACATCCTCTGGTATATATTCGGTTATGTCCAACAGAATGGTGTTTTCCTGCTTCCTGGGTGTTGTGATCCATTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTCTCTGGCACTTGGAATCATCTTGAGTTTCTAAAAAATGAATTCCAAATGAAAATGCTGGCTGGCCATCCCGAAAGCAATGAACCGAAACCTGTATCTGTCCTTTCGCAACAGTTTGCAAATTCTTTGAAAGATTTTCCATTGTGCTTGGTTTTGGGTTGTGAAGGGAGTGGTCTGTCTGAGAAATCCTGGCAGGTTTGTGAGCTTTTGAGTATTCCAATGGCGGGTGGTTTCGAGTCCCTCAATGTCTCAGTTGCAGGAGGAATTTTCTTGTACATGCTACAGGCTGAAAACCATAAACAAATTTGA

mRNA sequence

ATGCAATGCTCCTGCGTTTCCTGGTCCTCAAATCTGAAACTCGGACCTTCCTTTTCCAAATTGAAGCTATCATCAATTAACCAAGCAGAGACCACCGATTTTGCTGGAAGAATTTCTCTTCCTTCTCACGTGAAAGCCATCACCAGCACCTCCAACCCTTTCGTTAAGCACTGCGTCAAACTTCGCTTCAGTTCCTCTTATCGCCACTTCCATGGCTCCGTCATTGTCGTCGGAGCTACTCCAATAAGGGAAATTTGCAAGTTTCAAGAGTCTCTGCATGGGATAGCTTGTATATTGGAGTGCCTACTTCTGCTAGATGACGTTGAGGTTCCTGAAGGACTAATTGATATATCTGTTCGTATTGTGCGGGTGAGCCCAACTGTGATGAAAAAGCTTTCTGGCATGCAATCAACAGAATCTATTGATGCAATTGCCCTCATGAGAATACCTGCCAGTTTTTGTAGTGTAGATGGCAATGAGAAAGAAGTAGATTTTAAAAGATGTTTTCCATCTCCGCATCGAATATTAGTCCTTGAGGGAATCCAGGACCCAGGCAATCTTGGTACATTAATCAGCTTTTACATCCTCTGGTATATATTCGGTTATGTCCAACAGAATGGTGTTTTCCTGCTTCCTGGGTGTTGTGATCCATTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTCTCTGGCACTTGGAATCATCTTGAGTTTCTAAAAAATGAATTCCAAATGAAAATGCTGGCTGGCCATCCCGAAAGCAATGAACCGAAACCTGTATCTGTCCTTTCGCAACAGTTTGCAAATTCTTTGAAAGATTTTCCATTGTGCTTGGTTTTGGGTTGTGAAGGGAGTGGTCTGTCTGAGAAATCCTGGCAGGTTTGTGAGCTTTTGAGTATTCCAATGGCGGGTGGTTTCGAGTCCCTCAATGTCTCAGTTGCAGGAGGAATTTTCTTGTACATGCTACAGGCTGAAAACCATAAACAAATTTGA

Coding sequence (CDS)

ATGCAATGCTCCTGCGTTTCCTGGTCCTCAAATCTGAAACTCGGACCTTCCTTTTCCAAATTGAAGCTATCATCAATTAACCAAGCAGAGACCACCGATTTTGCTGGAAGAATTTCTCTTCCTTCTCACGTGAAAGCCATCACCAGCACCTCCAACCCTTTCGTTAAGCACTGCGTCAAACTTCGCTTCAGTTCCTCTTATCGCCACTTCCATGGCTCCGTCATTGTCGTCGGAGCTACTCCAATAAGGGAAATTTGCAAGTTTCAAGAGTCTCTGCATGGGATAGCTTGTATATTGGAGTGCCTACTTCTGCTAGATGACGTTGAGGTTCCTGAAGGACTAATTGATATATCTGTTCGTATTGTGCGGGTGAGCCCAACTGTGATGAAAAAGCTTTCTGGCATGCAATCAACAGAATCTATTGATGCAATTGCCCTCATGAGAATACCTGCCAGTTTTTGTAGTGTAGATGGCAATGAGAAAGAAGTAGATTTTAAAAGATGTTTTCCATCTCCGCATCGAATATTAGTCCTTGAGGGAATCCAGGACCCAGGCAATCTTGGTACATTAATCAGCTTTTACATCCTCTGGTATATATTCGGTTATGTCCAACAGAATGGTGTTTTCCTGCTTCCTGGGTGTTGTGATCCATTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTCTCTGGCACTTGGAATCATCTTGAGTTTCTAAAAAATGAATTCCAAATGAAAATGCTGGCTGGCCATCCCGAAAGCAATGAACCGAAACCTGTATCTGTCCTTTCGCAACAGTTTGCAAATTCTTTGAAAGATTTTCCATTGTGCTTGGTTTTGGGTTGTGAAGGGAGTGGTCTGTCTGAGAAATCCTGGCAGGTTTGTGAGCTTTTGAGTATTCCAATGGCGGGTGGTTTCGAGTCCCTCAATGTCTCAGTTGCAGGAGGAATTTTCTTGTACATGCTACAGGCTGAAAACCATAAACAAATTTGA

Protein sequence

MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVKLRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVRIVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILVLEGIQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELLSIPMAGGFESLNVSVAGGIFLYMLQAENHKQI

Homology

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BLAST of HG10011768 vs. NCBI nr
Match: XP_038904874.1 (uncharacterized tRNA/rRNA methyltransferase slr1673 [Benincasa hispida])

HSP 1 Score: 604.0 bits (1556), Expect = 8.0e-169
Identity = 298/337 (88.43%), Postives = 313/337 (92.88%), Query Frame = 0


Query: 1   MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVK 60
           MQCSCVSWSSNLKLGPSFSK KLSSINQAET DFA R+SLPSHVKAITSTSNPFVKHCVK
Sbjct: 1   MQCSCVSWSSNLKLGPSFSKSKLSSINQAETIDFAARVSLPSHVKAITSTSNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVR 120
           LRFSSSYRH+HG+V+VVGATPIREICKFQESLHGI C LECLLLLDDVEVPEGL+D SVR
Sbjct: 61  LRFSSSYRHYHGTVLVVGATPIREICKFQESLHGITCTLECLLLLDDVEVPEGLVDKSVR 120

Query: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILVLEG 180
           IVRVSPTVM+KLSGMQSTESIDAIALMRIPASFCSVDGNEK++DFKRCFPSPHRILVLE 
Sbjct: 121 IVRVSPTVMRKLSGMQSTESIDAIALMRIPASFCSVDGNEKDIDFKRCFPSPHRILVLER 180

Query: 181 IQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240
           IQDPGNLGTLI   + +      + NGVFLLPGCCDP+NEKALRASRGASFQLPIVSGTW
Sbjct: 181 IQDPGNLGTLIRSALAF------KWNGVFLLPGCCDPYNEKALRASRGASFQLPIVSGTW 240

Query: 241 NHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300
           NHLE LKN+FQMKMLAGHPESNEPK VSVLSQQFANSLK+FPLCLVLGCEGSGLS KSW 
Sbjct: 241 NHLEVLKNKFQMKMLAGHPESNEPKRVSVLSQQFANSLKEFPLCLVLGCEGSGLSGKSWH 300

Query: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAENHKQI 338
           VCELLSIPMAGGFESLNVSVAGGIFLYMLQAEN+  I
Sbjct: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAENNSHI 331

[Close]

BLAST of HG10011768 vs. NCBI nr
Match: XP_011650605.1 (uncharacterized protein LOC101218901 isoform X2 [Cucumis sativus] >KAE8650203.1 hypothetical protein Csa_010011 [Cucumis sativus])

HSP 1 Score: 582.0 bits (1499), Expect = 3.3e-162
Identity = 287/332 (86.45%), Postives = 302/332 (90.96%), Query Frame = 0


Query: 1   MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+SWSSN KL PSF K KLSSIN AE  DF GRI LPSHVKAITS SNPFVKHCVK
Sbjct: 1   MQCSCLSWSSNPKLAPSFPKSKLSSINIAEAIDFTGRIPLPSHVKAITSISNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVR 120
           LRFSSSYRHFHGSV+VVGATPIREICKFQESLHG+ C LECLLLLD+VEVPEGL++++VR
Sbjct: 61  LRFSSSYRHFHGSVVVVGATPIREICKFQESLHGVTCTLECLLLLDEVEVPEGLVNLTVR 120

Query: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILVLEG 180
           IVRVS  VMKKLSG+QSTESIDAIALMRIP SFCSVDGNEKEVDFKR FPSPHRILVLEG
Sbjct: 121 IVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKEVDFKRWFPSPHRILVLEG 180

Query: 181 IQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240
           IQDPGNLGTLI   + +      + NG+FLLPGCCDPFNEKALRASRGASFQLPIVSGTW
Sbjct: 181 IQDPGNLGTLIRSALAF------KWNGIFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240

Query: 241 NHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300
           NHLE  K EF+MKMLAGHPESNEPKPVSVLSQQF+NSLKDFPLCLVLGCEGSGLSEKSWQ
Sbjct: 241 NHLEVFKKEFEMKMLAGHPESNEPKPVSVLSQQFSNSLKDFPLCLVLGCEGSGLSEKSWQ 300

Query: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE 333
           VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE
Sbjct: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE 326

[Close]

BLAST of HG10011768 vs. NCBI nr
Match: XP_008450171.1 (PREDICTED: uncharacterized tRNA/rRNA methyltransferase YsgA isoform X1 [Cucumis melo] >KAA0060378.1 putative tRNA/rRNA methyltransferase YsgA isoform X1 [Cucumis melo var. makuwa] >TYK22118.1 putative tRNA/rRNA methyltransferase YsgA isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 579.3 bits (1492), Expect = 2.1e-161
Identity = 289/332 (87.05%), Postives = 302/332 (90.96%), Query Frame = 0


Query: 1   MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+SWSSN KLGPSF K KLSSINQAE  DF GRISLPSHVKAI+S SNPFVKHCVK
Sbjct: 1   MQCSCLSWSSNPKLGPSFHKSKLSSINQAEAIDFTGRISLPSHVKAISSISNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVR 120
           LRFSSSYRHFHGSV+VVGATPIREICKFQESLHGI C LE LLLLD+VEVPEGL++++VR
Sbjct: 61  LRFSSSYRHFHGSVVVVGATPIREICKFQESLHGITCTLEYLLLLDEVEVPEGLVNLTVR 120

Query: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILVLEG 180
           IVRVS  VMKKLSG+QSTESIDAIALMRIP SFCSVDGNEK VDFKR FPSPHRILVLE 
Sbjct: 121 IVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKVVDFKRWFPSPHRILVLER 180

Query: 181 IQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240
           IQDPGNLGTLI   + +      + NGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW
Sbjct: 181 IQDPGNLGTLIRSALAF------KWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240

Query: 241 NHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300
           NHLE  K EF+MKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ
Sbjct: 241 NHLEVFKKEFKMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300

Query: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE 333
           VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE
Sbjct: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE 326

[Close]

BLAST of HG10011768 vs. NCBI nr
Match: XP_031739071.1 (uncharacterized protein LOC101218901 isoform X1 [Cucumis sativus])

HSP 1 Score: 576.6 bits (1485), Expect = 1.4e-160
Identity = 287/335 (85.67%), Postives = 302/335 (90.15%), Query Frame = 0


Query: 1   MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+SWSSN KL PSF K KLSSIN AE  DF GRI LPSHVKAITS SNPFVKHCVK
Sbjct: 1   MQCSCLSWSSNPKLAPSFPKSKLSSINIAEAIDFTGRIPLPSHVKAITSISNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVIVVGATPI---REICKFQESLHGIACILECLLLLDDVEVPEGLIDI 120
           LRFSSSYRHFHGSV+VVGATPI   REICKFQESLHG+ C LECLLLLD+VEVPEGL+++
Sbjct: 61  LRFSSSYRHFHGSVVVVGATPISLYREICKFQESLHGVTCTLECLLLLDEVEVPEGLVNL 120

Query: 121 SVRIVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILV 180
           +VRIVRVS  VMKKLSG+QSTESIDAIALMRIP SFCSVDGNEKEVDFKR FPSPHRILV
Sbjct: 121 TVRIVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKEVDFKRWFPSPHRILV 180

Query: 181 LEGIQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVS 240
           LEGIQDPGNLGTLI   + +      + NG+FLLPGCCDPFNEKALRASRGASFQLPIVS
Sbjct: 181 LEGIQDPGNLGTLIRSALAF------KWNGIFLLPGCCDPFNEKALRASRGASFQLPIVS 240

Query: 241 GTWNHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEK 300
           GTWNHLE  K EF+MKMLAGHPESNEPKPVSVLSQQF+NSLKDFPLCLVLGCEGSGLSEK
Sbjct: 241 GTWNHLEVFKKEFEMKMLAGHPESNEPKPVSVLSQQFSNSLKDFPLCLVLGCEGSGLSEK 300

Query: 301 SWQVCELLSIPMAGGFESLNVSVAGGIFLYMLQAE 333
           SWQVCELLSIPMAGGFESLNVSVAGGIFLYMLQAE
Sbjct: 301 SWQVCELLSIPMAGGFESLNVSVAGGIFLYMLQAE 329

[Close]

BLAST of HG10011768 vs. NCBI nr
Match: XP_022136373.1 (uncharacterized protein LOC111008099 [Momordica charantia])

HSP 1 Score: 572.0 bits (1473), Expect = 3.4e-159
Identity = 288/337 (85.46%), Postives = 303/337 (89.91%), Query Frame = 0


Query: 1   MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+ WS+NLKLGPS SK K+ SI  AET D AGRISLPSHVKAITSTSNPFVKHCVK
Sbjct: 1   MQCSCIFWSTNLKLGPSISKSKV-SIAGAETIDIAGRISLPSHVKAITSTSNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVR 120
           LRFSSSYRHFHGSV+VVGATPIREIC+FQE+LHG    LECLLLLD+V+VPEGL+D+SVR
Sbjct: 61  LRFSSSYRHFHGSVLVVGATPIREICRFQETLHGTTSTLECLLLLDEVDVPEGLVDVSVR 120

Query: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILVLEG 180
           IVRVSPTVMKKLSGMQSTESIDAIALMRIPASF SV  NEKE +F+R FPS HRILVLEG
Sbjct: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFSSVYHNEKEANFRRWFPSLHRILVLEG 180

Query: 181 IQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240
           IQDPGNLGTLI   + +      + NGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW
Sbjct: 181 IQDPGNLGTLIRSALAF------KWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240

Query: 241 NHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300
           NHLE LKNEFQMKMLAGHPESNEPKPVS LSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ
Sbjct: 241 NHLEALKNEFQMKMLAGHPESNEPKPVSFLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300

Query: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAENHKQI 338
           VCELLSIPMAGGFESLNVSVAGGIFLYMLQ ENH  I
Sbjct: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQNENHTHI 330

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BLAST of HG10011768 vs. ExPASy Swiss-Prot
Match: P74261 (Uncharacterized tRNA/rRNA methyltransferase slr1673 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1673 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.6e-13
Identity = 82/293 (27.99%), Postives = 130/293 (44.37%), Query Frame = 0


Query: 40  LPSHVKAITSTSNPFVKHCVKLRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACIL 99
           L S + +ITST NP VK   +L   +  R   G +++ G T + E+   Q       C  
Sbjct: 4   LTSDIASITSTQNPLVKQLRQLH-QTKGRKQQGQLLLEG-THLLEVALAQGKGFNHGCFT 63

Query: 100 ECLLLLDDVEVPEGLIDISVRIVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGN 159
                 + V + + L+  SV    VS  V+ K++   + + + A   M            
Sbjct: 64  AMWQEKNPV-LADRLMAQSVHSYLVSGEVLAKMASTVNPDGVVATLTMD----------- 123

Query: 160 EKEVDFKRCFPSPHRI-LVLEGIQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPF 219
                F R  P   R+ LVLE +QDPGNLGT++       +       G++L   C DP 
Sbjct: 124 ----QFWRSPPPHARLGLVLERLQDPGNLGTILRTAAATGV------EGIWLTADCVDPT 183

Query: 220 NEKALRASRGASFQLPIVSGTWNHLEFLKNEFQ---MKMLAGHPESNEPKPVSVLSQQFA 279
           + K LR+S G+S  LP        L  L  +F    ++++A  P++ +    ++    F 
Sbjct: 184 SPKVLRSSAGSSLLLP--QQQLQSLPPLLEKFHTQGLQLIATVPQATQ----TLWEIDFQ 243

Query: 280 NSLKDFPLCLVLGCEGSGLSEKSWQV-CELLSIPMAGGFESLNVSVAGGIFLY 328
                 P  ++ G EG GLS    ++    ++IP A   ESLNV++A G+ LY
Sbjct: 244 R-----PTIVIFGSEGQGLSAPVLELTTHQVAIPQAPQVESLNVAIAVGVMLY 261

[Close]

BLAST of HG10011768 vs. ExPASy Swiss-Prot
Match: Q9VW14 (rRNA methyltransferase 3, mitochondrial OS=Drosophila melanogaster OX=7227 GN=CG14100 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 72/280 (25.71%), Postives = 127/280 (45.36%), Query Frame = 0


Query: 64  SSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVRIVR 123
           S   R  +  +IV G   I+E  +    +  +    +  L L   EV    ++   +I +
Sbjct: 130 SRKRRDKNRQIIVEGRRLIQEALQCGLKMEVLLFSQKDQLALVKEEVGVAQVETGTKIYK 189

Query: 124 VSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEV-DFKRCFPSPHRI-LVLEGI 183
           V    +K  S + +   +  +A+   P    S  G EK + + +R    P  I +V + I
Sbjct: 190 VPQHDLKTWSSLVTPPGL--MAIFDRP----SDKGLEKNLAEQQRLGSQPFPITVVCDNI 249

Query: 184 QDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSG-TW 243
           ++P NLG++I           +  + V +  GCCDP+  KALR   G  F++PI    TW
Sbjct: 250 REPNNLGSIIR------TCAALPCSQVVVTHGCCDPWESKALRGGCGGQFRVPIRDDVTW 309

Query: 244 NHLEF-LKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPL--CLVLGCEGSGLSEK 303
           + L   +  E          E+N+ K  +  +  +A+ +K       L++G E  G+SE+
Sbjct: 310 DELALTIPPEAADDCHVFIAETNQRKRENNQTIDYAD-IKGLGAHNLLIIGGESHGVSEE 369

Query: 304 SWQVCELLS-------IPMAGGFESLNVSVAGGIFLYMLQ 331
           +++   L+        IP+A G +SLNV+ A  + L+ L+
Sbjct: 370 AYRFLNLVGGKGKCIYIPLAAGIDSLNVASALTLLLFELR 396

[Close]

BLAST of HG10011768 vs. ExPASy Swiss-Prot
Match: Q8Y016 (23S rRNA (guanosine-2'-O-)-methyltransferase RlmB OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=rlmB PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.7e-09
Identity = 46/157 (29.30%), Postives = 74/157 (47.13%), Query Frame = 0


Query: 172 PHRILVLEGIQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASF 231
           P  +LVL+G+ DP NLG  +       +      + V          N    + + GA+ 
Sbjct: 95  PPLLLVLDGVTDPHNLGACLR------VADAAGAHAVIAPKDRSVGINTTVAKVASGAAE 154

Query: 232 QLPIVSGTWNHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEG 291
            +P ++ T  +L     E Q + +     ++E +      Q    +    P+ LV+G EG
Sbjct: 155 TVPYITVT--NLARTLRELQQRGVWVIGTADEAE------QDLYRADFKGPIALVMGAEG 214

Query: 292 SGLSEKSWQVCE-LLSIPMAGGFESLNVSVAGGIFLY 328
            G+   + + C+ L+SIPMAG  ESLNVSVA G+ L+
Sbjct: 215 EGMRRLTRETCDTLVSIPMAGSVESLNVSVASGVCLF 237

[Close]

BLAST of HG10011768 vs. ExPASy Swiss-Prot
Match: Q6IN84 (rRNA methyltransferase 1, mitochondrial OS=Homo sapiens OX=9606 GN=MRM1 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.7e-09
Identity = 51/163 (31.29%), Postives = 75/163 (46.01%), Query Frame = 0


Query: 176 LVLEGIQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPI 235
           LVL+GIQDP N G ++          ++  + V        P      ++S GA   + +
Sbjct: 148 LVLDGIQDPRNFGAVLR------SAHFLGVDKVITSRRNSCPLTPVVSKSSAGAMEVMDV 207

Query: 236 VSGTWNHLEFLKNEFQMKML----AGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEG 295
            S T +   FL+ + Q   L     G P + +P+   +        L + P  LVLG EG
Sbjct: 208 FS-TDDLTGFLQTKAQQGWLVAGTVGCPSTEDPQSSEIPIMSCLEFLWERPTLLVLGNEG 267

Query: 296 SGLSEKSWQVCELLSI-----PMAGGFESLNVSVAGGIFLYML 330
           SGLS++    C+LL        +  G ESLNVSVA GI L+ +
Sbjct: 268 SGLSQEVQASCQLLLTILPRRQLPPGLESLNVSVAAGILLHSI 303

[Close]

BLAST of HG10011768 vs. ExPASy Swiss-Prot
Match: A4QNL8 (rRNA methyltransferase 3, mitochondrial OS=Xenopus tropicalis OX=8364 GN=mrm3 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.6e-08
Identity = 56/201 (27.86%), Postives = 81/201 (40.30%), Query Frame = 0


Query: 176 LVLEGIQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPI 235
           L+ + I+DPGNLGT++              N V L  GC D +  K LRA  GA F+LP+
Sbjct: 207 LICDNIRDPGNLGTILR------CAAGAGCNKVLLTKGCVDAWEPKVLRAGMGAHFRLPV 266

Query: 236 VSG-TW----NHLE-----FLKNEFQ--MKMLAGHPE---------SNEPKPVSVLS--- 295
           +S   W    N+L      FL + F+  MK   G            S  P+ + +     
Sbjct: 267 ISSLDWDIVPNYLSAGTKVFLADNFRPDMKHKTGDVSEKASDYGWVSTNPRRILITEEGY 326

Query: 296 --------------------QQFANSLKDFPLCLVLGCEGSGLSEKSWQVCE-----LLS 328
                               Q +  S    P  +V+G E  GLS +S  + E      L 
Sbjct: 327 ESSSDEEDNADKLYIPGLEVQSYFESWAQSPCAIVIGGETHGLSIESLLLAEKSNGKRLY 386

[Close]

BLAST of HG10011768 vs. ExPASy TrEMBL
Match: A0A5D3DF85 (Putative tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001150 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.0e-161
Identity = 289/332 (87.05%), Postives = 302/332 (90.96%), Query Frame = 0


Query: 1   MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+SWSSN KLGPSF K KLSSINQAE  DF GRISLPSHVKAI+S SNPFVKHCVK
Sbjct: 1   MQCSCLSWSSNPKLGPSFHKSKLSSINQAEAIDFTGRISLPSHVKAISSISNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVR 120
           LRFSSSYRHFHGSV+VVGATPIREICKFQESLHGI C LE LLLLD+VEVPEGL++++VR
Sbjct: 61  LRFSSSYRHFHGSVVVVGATPIREICKFQESLHGITCTLEYLLLLDEVEVPEGLVNLTVR 120

Query: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILVLEG 180
           IVRVS  VMKKLSG+QSTESIDAIALMRIP SFCSVDGNEK VDFKR FPSPHRILVLE 
Sbjct: 121 IVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKVVDFKRWFPSPHRILVLER 180

Query: 181 IQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240
           IQDPGNLGTLI   + +      + NGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW
Sbjct: 181 IQDPGNLGTLIRSALAF------KWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240

Query: 241 NHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300
           NHLE  K EF+MKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ
Sbjct: 241 NHLEVFKKEFKMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300

Query: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE 333
           VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE
Sbjct: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE 326

[Close]

BLAST of HG10011768 vs. ExPASy TrEMBL
Match: A0A1S3BNM2 (uncharacterized tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491842 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.0e-161
Identity = 289/332 (87.05%), Postives = 302/332 (90.96%), Query Frame = 0


Query: 1   MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+SWSSN KLGPSF K KLSSINQAE  DF GRISLPSHVKAI+S SNPFVKHCVK
Sbjct: 1   MQCSCLSWSSNPKLGPSFHKSKLSSINQAEAIDFTGRISLPSHVKAISSISNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVR 120
           LRFSSSYRHFHGSV+VVGATPIREICKFQESLHGI C LE LLLLD+VEVPEGL++++VR
Sbjct: 61  LRFSSSYRHFHGSVVVVGATPIREICKFQESLHGITCTLEYLLLLDEVEVPEGLVNLTVR 120

Query: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILVLEG 180
           IVRVS  VMKKLSG+QSTESIDAIALMRIP SFCSVDGNEK VDFKR FPSPHRILVLE 
Sbjct: 121 IVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKVVDFKRWFPSPHRILVLER 180

Query: 181 IQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240
           IQDPGNLGTLI   + +      + NGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW
Sbjct: 181 IQDPGNLGTLIRSALAF------KWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240

Query: 241 NHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300
           NHLE  K EF+MKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ
Sbjct: 241 NHLEVFKKEFKMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300

Query: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE 333
           VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE
Sbjct: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAE 326

[Close]

BLAST of HG10011768 vs. ExPASy TrEMBL
Match: A0A6J1C7F0 (uncharacterized protein LOC111008099 OS=Momordica charantia OX=3673 GN=LOC111008099 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.6e-159
Identity = 288/337 (85.46%), Postives = 303/337 (89.91%), Query Frame = 0


Query: 1   MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+ WS+NLKLGPS SK K+ SI  AET D AGRISLPSHVKAITSTSNPFVKHCVK
Sbjct: 1   MQCSCIFWSTNLKLGPSISKSKV-SIAGAETIDIAGRISLPSHVKAITSTSNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVR 120
           LRFSSSYRHFHGSV+VVGATPIREIC+FQE+LHG    LECLLLLD+V+VPEGL+D+SVR
Sbjct: 61  LRFSSSYRHFHGSVLVVGATPIREICRFQETLHGTTSTLECLLLLDEVDVPEGLVDVSVR 120

Query: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILVLEG 180
           IVRVSPTVMKKLSGMQSTESIDAIALMRIPASF SV  NEKE +F+R FPS HRILVLEG
Sbjct: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFSSVYHNEKEANFRRWFPSLHRILVLEG 180

Query: 181 IQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240
           IQDPGNLGTLI   + +      + NGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW
Sbjct: 181 IQDPGNLGTLIRSALAF------KWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240

Query: 241 NHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300
           NHLE LKNEFQMKMLAGHPESNEPKPVS LSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ
Sbjct: 241 NHLEALKNEFQMKMLAGHPESNEPKPVSFLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300

Query: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAENHKQI 338
           VCELLSIPMAGGFESLNVSVAGGIFLYMLQ ENH  I
Sbjct: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQNENHTHI 330

[Close]

BLAST of HG10011768 vs. ExPASy TrEMBL
Match: A0A6J1FNI0 (uncharacterized protein LOC111447061 OS=Cucurbita moschata OX=3662 GN=LOC111447061 PE=4 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 6.0e-154
Identity = 279/335 (83.28%), Postives = 295/335 (88.06%), Query Frame = 0


Query: 1   MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+S  SNLKLGPS SK KLSSI + E  D A RISLPSHVKAITSTSNPFVKHCVK
Sbjct: 1   MQCSCISLPSNLKLGPSISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVR 120
           LRF+SSYRHFHGSV+VVGATPIREICKFQESL GI+C LECLLLLD+VE+PE L+D+SVR
Sbjct: 61  LRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSVR 120

Query: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILVLEG 180
           +VRVSPTVMKKLSGMQSTESIDAIALMRIP SF S+DGN K+   KR FPSPHRILVLEG
Sbjct: 121 VVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLEG 180

Query: 181 IQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240
           IQDPGNLGTLI   + +      + NGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW
Sbjct: 181 IQDPGNLGTLIRSALAF------KWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240

Query: 241 NHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300
           NHLE LK EFQMKMLAGHPESNE KPVSVLSQQFANS KD PLCLVLG EGSGLSEK WQ
Sbjct: 241 NHLEDLKTEFQMKMLAGHPESNELKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQ 300

Query: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAENHK 336
           VCELLSIPMAGGFESLNVSVAGGIFLYMLQA N +
Sbjct: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAVNDR 329

[Close]

BLAST of HG10011768 vs. ExPASy TrEMBL
Match: A0A6J1JVY6 (uncharacterized protein LOC111488367 OS=Cucurbita maxima OX=3661 GN=LOC111488367 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.1e-152
Identity = 278/337 (82.49%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MQCSCVSWSSNLKLGPSFSKLKLSSINQAETTDFAGRISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+S  SNLKLGPS SK KLSS  + E  D A RISLPSHVKAITSTSNPFVKHCVK
Sbjct: 1   MQCSCISLPSNLKLGPSISKFKLSSNLKVEAIDLAARISLPSHVKAITSTSNPFVKHCVK 60

Query: 61  LRFSSSYRHFHGSVIVVGATPIREICKFQESLHGIACILECLLLLDDVEVPEGLIDISVR 120
           LRFSSSYRHFHGSV+VVGATPIREICKFQESL GI+C L CLLLLD+VEVPE L+D+SVR
Sbjct: 61  LRFSSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLACLLLLDEVEVPEELVDVSVR 120

Query: 121 IVRVSPTVMKKLSGMQSTESIDAIALMRIPASFCSVDGNEKEVDFKRCFPSPHRILVLEG 180
           IVRVSPTVMKKLSGMQS ESIDAIALMRIP SFCS+DGN K+   K  FPSPHRILVL+G
Sbjct: 121 IVRVSPTVMKKLSGMQSIESIDAIALMRIPDSFCSLDGNLKQAHSKTWFPSPHRILVLDG 180

Query: 181 IQDPGNLGTLISFYILWYIFGYVQQNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240
           IQDPGNLGTLI   + +      + NGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW
Sbjct: 181 IQDPGNLGTLIRSALAF------KWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTW 240

Query: 241 NHLEFLKNEFQMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQ 300
           NHLE LK +FQMKMLAGHPESNE KPVSVLSQQFANS KD  LCLVLG EGSGLSEKSWQ
Sbjct: 241 NHLEALKTDFQMKMLAGHPESNELKPVSVLSQQFANSSKDISLCLVLGSEGSGLSEKSWQ 300

Query: 301 VCELLSIPMAGGFESLNVSVAGGIFLYMLQAENHKQI 338
           VCELLSIPM GGFESLNVSVAGGIFLYMLQAEN + I
Sbjct: 301 VCELLSIPMVGGFESLNVSVAGGIFLYMLQAENDRHI 331

[Close]

BLAST of HG10011768 vs. TAIR 10
Match: AT4G38020.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 388.3 bits (996), Expect = 6.4e-108
Identity = 194/299 (64.88%), Postives = 238/299 (79.60%), Query Frame = 0


Query: 35  AGRISLPSHVKAITSTSNPFVKHCVKLRFSSSYRHFHGSVIVVGATPIREICKFQESLHG 94
           A R+SLPSHV +ITST+NPFVKHC+KLR SSSYRH HGSV+VVG  PIRE+C FQ +  G
Sbjct: 57  ANRVSLPSHVNSITSTTNPFVKHCLKLRQSSSYRHAHGSVLVVGTIPIREVCMFQTNKQG 116

Query: 95  IACILECLLLLDDVEVPEGLIDISVRIVRVSPTVMKKLSGMQSTESIDAIALMRIPASFC 154
           +   +ECLLL ++ ++P+GL  +S+RIVRVS  VMKKLSG+QSTES++AIALMRIP+SF 
Sbjct: 117 MTTEIECLLLHEEAKIPQGLESLSIRIVRVSSLVMKKLSGVQSTESVEAIALMRIPSSFT 176

Query: 155 SV-DGNEKEVDFKRCFPSPHRILVLEGIQDPGNLGTLISFYILWYIFGYVQQNGVFLLPG 214
            + D  +   D  + FPS HR+LVL+ IQDPGNLGTL+   + +        +G FLLPG
Sbjct: 177 DLKDDKDIITDCNKWFPSAHRVLVLDSIQDPGNLGTLVRSAMAF------NWDGAFLLPG 236

Query: 215 CCDPFNEKALRASRGASFQLPIVSGTWNHLEFLKNEFQMKMLAGHP--ESNEPKPVSVLS 274
           CCDP+N+KALRASRGASFQLPIVSG WNHL+ L+NEFQMK+LAGHP   + + KPVS LS
Sbjct: 237 CCDPYNDKALRASRGASFQLPIVSGNWNHLKLLENEFQMKLLAGHPATTTQKLKPVSKLS 296

Query: 275 QQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELLSIPMAGGFESLNVSVAGGIFLYMLQ 331
            +FA SL + PLCL+LG EG+GLSE++ +VC L+SIPMAG FESLNVSVAGGIFLYMLQ
Sbjct: 297 VEFAQSLAEKPLCLILGSEGNGLSEQARKVCVLVSIPMAGDFESLNVSVAGGIFLYMLQ 349

The following BLAST results are available for this feature:

BLAST of HG10011768 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904874.1	8.0e-169	88.43	uncharacterized tRNA/rRNA methyltransferase slr1673 [Benincasa hispida]	[more]
XP_011650605.1	3.3e-162	86.45	uncharacterized protein LOC101218901 isoform X2 [Cucumis sativus] >KAE8650203.1 ...	[more]
XP_008450171.1	2.1e-161	87.05	PREDICTED: uncharacterized tRNA/rRNA methyltransferase YsgA isoform X1 [Cucumis ...	[more]
XP_031739071.1	1.4e-160	85.67	uncharacterized protein LOC101218901 isoform X1 [Cucumis sativus]	[more]
XP_022136373.1	3.4e-159	85.46	uncharacterized protein LOC111008099 [Momordica charantia]	[more]

BLAST of HG10011768 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P74261	2.6e-13	27.99	Uncharacterized tRNA/rRNA methyltransferase slr1673 OS=Synechocystis sp. (strain...	[more]
Q9VW14	1.0e-09	25.71	rRNA methyltransferase 3, mitochondrial OS=Drosophila melanogaster OX=7227 GN=CG...	[more]
Q8Y016	6.7e-09	29.30	23S rRNA (guanosine-2'-O-)-methyltransferase RlmB OS=Ralstonia solanacearum (str...	[more]
Q6IN84	8.7e-09	31.29	rRNA methyltransferase 1, mitochondrial OS=Homo sapiens OX=9606 GN=MRM1 PE=1 SV=...	[more]
A4QNL8	5.6e-08	27.86	rRNA methyltransferase 3, mitochondrial OS=Xenopus tropicalis OX=8364 GN=mrm3 PE...	[more]

BLAST of HG10011768 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DF85	1.0e-161	87.05	Putative tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo var. makuwa...	[more]
A0A1S3BNM2	1.0e-161	87.05	uncharacterized tRNA/rRNA methyltransferase YsgA isoform X1 OS=Cucumis melo OX=3...	[more]
A0A6J1C7F0	1.6e-159	85.46	uncharacterized protein LOC111008099 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1FNI0	6.0e-154	83.28	uncharacterized protein LOC111447061 OS=Cucurbita moschata OX=3662 GN=LOC1114470...	[more]
A0A6J1JVY6	1.1e-152	82.49	uncharacterized protein LOC111488367 OS=Cucurbita maxima OX=3661 GN=LOC111488367...	[more]

BLAST of HG10011768 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38020.1	6.4e-108	64.88	tRNA/rRNA methyltransferase (SpoU) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001537	tRNA/rRNA methyltransferase, SpoU type	PFAM	PF00588	SpoU_methylase	coord: 175..327 e-value: 6.2E-21 score: 75.0
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 164..336 e-value: 8.2E-31 score: 108.8
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 46..150 e-value: 4.0E-10 score: 41.8
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 46..144
None	No IPR available	PANTHER	PTHR43191	RRNA METHYLTRANSFERASE 3,	coord: 32..335
None	No IPR available	PANTHER	PTHR43191:SF2	RRNA METHYLTRANSFERASE 3, MITOCHONDRIAL	coord: 32..335
None	No IPR available	CDD	cd18095	SpoU-like_rRNA-MTase	coord: 174..329 e-value: 8.01498E-45 score: 148.343
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 171..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011768.1	HG10011768.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006396	RNA processing
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008173	RNA methyltransferase activity