HG10011712 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10011712
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUbiquitin carboxyl-terminal hydrolase family protein
LocationChr01: 9806594 .. 9807760 (+)
RNA-Seq ExpressionHG10011712
SyntenyHG10011712
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCTCCAAATTATTAGAATCCCTCATCGTTTCAGCCAGACTCGTGCTTTTGTTGATGCAAAGGTCAAATGGGTAAGAGATCCGTACCTTGATTTTGCAGTTCAAAGAGAGAAGAACCTCAGACAAGTAATTTCCCTTAAGAATATAATCGCTTCGAGTCCTTTAAAATCTCTTCCACTTTCCTCTGTCTCTTTACTGAAACAGAACCTCAAAGTCCCTACTACCACCATCTCTAAGTTCTTCGAGTTATACCCCTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGCCTCCATCCTCATGTCAAGCTCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCAACCACATAGGGATGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTAAATGTCATTGAGAGGCTGCAATGGGATTTGGGTCTACCCTACAGGTTCATTCCAACTCTTCTTGCTGATTATCCTGAATATTTTCAGGTTTGTAGTGTGAAAGACTGTTTAACAGGTGAACAAACCCTTGCATTAGAGCTACTTTCTTGGAGGAAAGATCTTTCAGTCTCTGAACTGAAAAAAAGGGAATATCTGGAAGGCAATGTTGGGAGTAGGAATAGAAATCATATTGCATTTCCAATGAGTTTCCCAAGGGGTTTCGATTTGCAGAAGAAGGTGATGAATTGGGTGGAGGAGTGGCAGCGTCTGCCCTACATTTCACCATACGAAAATGCATTCCATCTAGTACCAAATAGTGACCAAGCTGAGAAATGGGCTGTGGCAGTTCTCCATGAGTTGCTTTACCTTATGGTCTCGAAGAAAACCGAAAAAGAGAACATCTTCTATTTGGGAGAGTATTTGGGATTCGGTTCTAGGTTGAAGAAAGCCTTAGTTCATCACCCAGGTATATTTTATGTCTCAAACAAGATTAGAACACAAACTGTGGTCCTTAGAGAGGCTTATAAGAAGGATTTTTTGGTAGAAAAACACCCTTTGATGGGAATGAGGCATCAATACATTCACCTTATGAACAAAGTTGTAAGGAGACCTAGACCAGGCATCATATTAGCTTCTTCCAGAGTTAAAAGACAGAATAATCCCTTTGCCAGAATAAAGAAGTTTAACTGA

mRNA sequence

ATGATTCTCCAAATTATTAGAATCCCTCATCGTTTCAGCCAGACTCGTGCTTTTGTTGATGCAAAGGTCAAATGGGTAAGAGATCCGTACCTTGATTTTGCAGTTCAAAGAGAGAAGAACCTCAGACAAGTAATTTCCCTTAAGAATATAATCGCTTCGAGTCCTTTAAAATCTCTTCCACTTTCCTCTGTCTCTTTACTGAAACAGAACCTCAAAGTCCCTACTACCACCATCTCTAAGTTCTTCGAGTTATACCCCTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGCCTCCATCCTCATGTCAAGCTCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCAACCACATAGGGATGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTAAATGTCATTGAGAGGCTGCAATGGGATTTGGGTCTACCCTACAGGTTCATTCCAACTCTTCTTGCTGATTATCCTGAATATTTTCAGGTTTGTAGTGTGAAAGACTGTTTAACAGGTGAACAAACCCTTGCATTAGAGCTACTTTCTTGGAGGAAAGATCTTTCAGTCTCTGAACTGAAAAAAAGGGAATATCTGGAAGGCAATGTTGGGAGTAGGAATAGAAATCATATTGCATTTCCAATGAGTTTCCCAAGGGGTTTCGATTTGCAGAAGAAGGTGATGAATTGGGTGGAGGAGTGGCAGCGTCTGCCCTACATTTCACCATACGAAAATGCATTCCATCTAGTACCAAATAGTGACCAAGCTGAGAAATGGGCTGTGGCAGTTCTCCATGAGTTGCTTTACCTTATGGTCTCGAAGAAAACCGAAAAAGAGAACATCTTCTATTTGGGAGAGTATTTGGGATTCGGTTCTAGGTTGAAGAAAGCCTTAGTTCATCACCCAGGTATATTTTATGTCTCAAACAAGATTAGAACACAAACTGTGGTCCTTAGAGAGGCTTATAAGAAGGATTTTTTGGTAGAAAAACACCCTTTGATGGGAATGAGGCATCAATACATTCACCTTATGAACAAAGTTGTAAGGAGACCTAGACCAGGCATCATATTAGCTTCTTCCAGAGTTAAAAGACAGAATAATCCCTTTGCCAGAATAAAGAAGTTTAACTGA

Coding sequence (CDS)

ATGATTCTCCAAATTATTAGAATCCCTCATCGTTTCAGCCAGACTCGTGCTTTTGTTGATGCAAAGGTCAAATGGGTAAGAGATCCGTACCTTGATTTTGCAGTTCAAAGAGAGAAGAACCTCAGACAAGTAATTTCCCTTAAGAATATAATCGCTTCGAGTCCTTTAAAATCTCTTCCACTTTCCTCTGTCTCTTTACTGAAACAGAACCTCAAAGTCCCTACTACCACCATCTCTAAGTTCTTCGAGTTATACCCCTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGCCTCCATCCTCATGTCAAGCTCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCAACCACATAGGGATGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTAAATGTCATTGAGAGGCTGCAATGGGATTTGGGTCTACCCTACAGGTTCATTCCAACTCTTCTTGCTGATTATCCTGAATATTTTCAGGTTTGTAGTGTGAAAGACTGTTTAACAGGTGAACAAACCCTTGCATTAGAGCTACTTTCTTGGAGGAAAGATCTTTCAGTCTCTGAACTGAAAAAAAGGGAATATCTGGAAGGCAATGTTGGGAGTAGGAATAGAAATCATATTGCATTTCCAATGAGTTTCCCAAGGGGTTTCGATTTGCAGAAGAAGGTGATGAATTGGGTGGAGGAGTGGCAGCGTCTGCCCTACATTTCACCATACGAAAATGCATTCCATCTAGTACCAAATAGTGACCAAGCTGAGAAATGGGCTGTGGCAGTTCTCCATGAGTTGCTTTACCTTATGGTCTCGAAGAAAACCGAAAAAGAGAACATCTTCTATTTGGGAGAGTATTTGGGATTCGGTTCTAGGTTGAAGAAAGCCTTAGTTCATCACCCAGGTATATTTTATGTCTCAAACAAGATTAGAACACAAACTGTGGTCCTTAGAGAGGCTTATAAGAAGGATTTTTTGGTAGAAAAACACCCTTTGATGGGAATGAGGCATCAATACATTCACCTTATGAACAAAGTTGTAAGGAGACCTAGACCAGGCATCATATTAGCTTCTTCCAGAGTTAAAAGACAGAATAATCCCTTTGCCAGAATAAAGAAGTTTAACTGA

Protein sequence

MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVVRRPRPGIILASSRVKRQNNPFARIKKFN
Homology
BLAST of HG10011712 vs. NCBI nr
Match: XP_038906250.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida])

HSP 1 Score: 710.7 bits (1833), Expect = 7.0e-201
Identity = 352/382 (92.15%), Postives = 364/382 (95.29%), Query Frame = 0

Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           M LQI RIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNII SSPLK LP
Sbjct: 1   MFLQITRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIVSSPLKFLP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LS+VSLLKQNLK+PTTTISKFFELYPSVFIQFQPS+G HPHVKLTSQALLLHKEESTIH 
Sbjct: 61  LSNVSLLKQNLKIPTTTISKFFELYPSVFIQFQPSVGFHPHVKLTSQALLLHKEESTIHI 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDDVVKRLAKLLMLTGAGKLPL +IERLQWDLGLPYRFIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYIIERLQWDLGLPYRFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           D LTGEQTLALELLSWRKDLSVSELK+RE LEGN+GSRNR+HIAF MSFPRGFDLQKKVM
Sbjct: 181 DYLTGEQTLALELLSWRKDLSVSELKRRECLEGNLGSRNRSHIAFRMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKWAVAVLHELLYLM+SKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMISKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
           GFGSR KKALVHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMG RHQY+HLMNKVV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLIEKHPLMGTRHQYLHLMNKVV 360

Query: 361 RRPRPGIILASSRVKRQNNPFA 383
           RRPRPGIILASSR KR+   FA
Sbjct: 361 RRPRPGIILASSRAKRRKTLFA 382

BLAST of HG10011712 vs. NCBI nr
Match: XP_008456527.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0036503.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYJ99978.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 708.4 bits (1827), Expect = 3.5e-200
Identity = 347/378 (91.80%), Postives = 364/378 (96.30%), Query Frame = 0

Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MILQI RIPHRF+Q RAFVDAKVKWVRDPYLDFAVQREKNL+QVISLKNII SSPL S+P
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVK+TSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDL+VSELKKREYLEGN GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQ LPYISPYENAFHL PNSDQAEKWAVAVLHELLYL +SKKTEKENI+ LG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQY+HLMNKV+
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360

Query: 361 RRPRPGIILASSRVKRQN 379
           R+PRPGIILASSR KR+N
Sbjct: 361 RKPRPGIILASSRGKRRN 378

BLAST of HG10011712 vs. NCBI nr
Match: XP_022136370.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 684.5 bits (1765), Expect = 5.4e-193
Identity = 336/382 (87.96%), Postives = 357/382 (93.46%), Query Frame = 0

Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL+  RIP+R SQTR FVDAKVKWVRDPYLDFAVQREKNLRQVISLKN+I S+P KSLP
Sbjct: 1   MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTT+SKFF+LYPSVF QFQPS GLHP VKLT QAL LHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDDVVKRLAKLLMLTGAG+LPL VIERLQWDLGLPY+FIPTLLADYPEYFQVC+V+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALE+LSWRK+LS+SELK+RE  +GNV SR  NHIAFPMS P+GFD +KKVM
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW VAVLHELLYL+VSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
           GFGSR KKALVHHPGIFYVSNKIRTQTVVLREAY+KDFLVEKHPLMGMRHQYIHLMNKVV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKVV 360

Query: 361 RRPRPGIILASSRVKRQNNPFA 383
           RRPRPGIILASSR KRQNNP++
Sbjct: 361 RRPRPGIILASSRGKRQNNPYS 382

BLAST of HG10011712 vs. NCBI nr
Match: KAG7031364.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 680.6 bits (1755), Expect = 7.8e-192
Identity = 337/382 (88.22%), Postives = 352/382 (92.15%), Query Frame = 0

Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL + R PHR  QTRAFVDAKVKWVRDPYLDF VQREKNLRQVISLKN+I SSP KS+P
Sbjct: 1   MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLKVPTT+ISKF +LYPSVFIQFQPSLGLHPHVKLTSQAL LHKEESTIHN
Sbjct: 61  LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LEGN   RN  HIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW  AVLHELLYLMVSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYIHLMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360

Query: 361 RRPRPGIILASSRVKRQNNPFA 383
           RRPRP IILASSR KRQNNP A
Sbjct: 361 RRPRPRIILASSRDKRQNNPSA 382

BLAST of HG10011712 vs. NCBI nr
Match: XP_022994938.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita maxima])

HSP 1 Score: 679.1 bits (1751), Expect = 2.3e-191
Identity = 333/382 (87.17%), Postives = 352/382 (92.15%), Query Frame = 0

Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL++ R PHR  QTRAFVDAKVKWVRDPYLDF VQREKNLRQVISLKN+I SSP KS+P
Sbjct: 1   MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLK PTT+ISKFF+LYPSVFIQFQPSLGLHPHVKLTSQ+L LHKEE TIHN
Sbjct: 61  LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDD+VKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIP LLADYPEYFQVCS++
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LEGN   RN NHIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW  AVLHELLYLMVSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYIHLMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360

Query: 361 RRPRPGIILASSRVKRQNNPFA 383
           RRPRP IILASSR KRQNNP A
Sbjct: 361 RRPRPRIILASSRGKRQNNPSA 382

BLAST of HG10011712 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.8e-51
Identity = 125/350 (35.71%), Postives = 198/350 (56.57%), Query Frame = 0

Query: 13  SQTRAFVDAKVKWVRDPYLDFA--VQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQN 72
           +Q R +VD  +KW RDPY D    + R   L+ V+SLKN I   P + +P+S++S   + 
Sbjct: 19  TQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQ 78

Query: 73  LKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVV 132
             V +T I+ F   +PS+F +F  P   L P  +LT +A  L ++E  ++  Q   DD+ 
Sbjct: 79  FDV-STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVY--QTSADDLR 138

Query: 133 KRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTL 192
            RL KL++++    LPL++++ ++W LGLP  ++     +    F+   ++D   G + L
Sbjct: 139 DRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMED---GVKGL 198

Query: 193 ALELLSWRKDLSV---SELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEW 252
           A++     K LSV   + +KKR       G  +   I FP+   +G  L+ K+ +W+ E+
Sbjct: 199 AVDYNGGDKVLSVLQKNAMKKRR------GEVSLEEIEFPLFPSKGCRLRVKIEDWLMEF 258

Query: 253 QRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRL 312
           Q+LPY+SPY++   L P+SD AEK  V  LHELL L V    E++ +  L ++ G   ++
Sbjct: 259 QKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKV 318

Query: 313 KKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLM 357
            KA   HP IFY+S K +T T +LRE Y+    VE HP++G+R +YI LM
Sbjct: 319 HKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLM 355

BLAST of HG10011712 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.3e-35
Identity = 116/357 (32.49%), Postives = 183/357 (51.26%), Query Frame = 0

Query: 19  VDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVPTTTI 78
           V A VK  ++   D  VQR+K L+ V++++ I+ S P + + L  +   +++L +     
Sbjct: 72  VRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKR-- 131

Query: 79  SKFFEL---YPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKL 138
            +F  L   YP VF +           K+TS+A  L+ +E  I N     D +V +L KL
Sbjct: 132 RRFIALLRKYPGVF-EIVEEGAYSLRFKMTSEAERLYLDEMRIRNEL--EDVLVVKLRKL 191

Query: 139 LMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLS 198
           +M++   ++ L  I  L+ DLGLP  F  T+   YP+YF+V      +   +  ALEL  
Sbjct: 192 VMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV------VPTPRGPALELTH 251

Query: 199 WRKDLSVSELKKREYLEGNVGSRNRNHIA-FPMSF-----PRGFDLQKKVMNWVEEWQRL 258
           W  +L+VS  +  E       S  RN I   P  F     PRG +L K     + +++ +
Sbjct: 252 WDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 311

Query: 259 PYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKA 318
            YISPY++  HL   + + EK A  V+HELL L   K+T  +++ +  E   F  +L+  
Sbjct: 312 QYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGM 371

Query: 319 LVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVVRRPRPG 367
           L+ HP +FYVS K    +V LREAY+   L++K PL  ++ +   L++ V R PR G
Sbjct: 372 LIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVS-VPRFPRRG 416

BLAST of HG10011712 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.4e-34
Identity = 112/365 (30.68%), Postives = 182/365 (49.86%), Query Frame = 0

Query: 21  AKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVP-TTTIS 80
           A VK  ++   D  +QR+K L+ V+ L+NI+ S+P + + L  +   +++L +     + 
Sbjct: 59  AAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLI 118

Query: 81  KFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLMLT 140
              + +P VF   +  +      +LT  A  L+ +E  +H         V +L KLLM++
Sbjct: 119 ALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDE--LHLKNESEGLAVTKLRKLLMMS 178

Query: 141 GAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKD 200
              ++ +  I  L+ DLGLP  F  T+   YP+YF+V  +      ++   LEL  W  +
Sbjct: 179 QDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQM------DRGPGLELTHWDPE 238

Query: 201 LSVSELKKREYLEGNVGSRNRNHIA-FPMSF-----PRGFDLQKKVMNWVEEWQRLPYIS 260
           L+VS  +  E        + RN I   P+ F     P+G  L +     V +++ +PYIS
Sbjct: 239 LAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYIS 298

Query: 261 PYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKALVHH 320
           PY +  HL   S + EK A  V+HE+L L + K+T  +++ +  E   F   L+  L+ H
Sbjct: 299 PYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 358

Query: 321 PGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVVRRPRPGIILASSR 379
           P +FYVS K    +V LREAYK   LVEK  L+ ++ + +  +  V R PR G+   S  
Sbjct: 359 PDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEK-MRALVAVPRFPRRGVPATSEE 413

BLAST of HG10011712 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.0e-34
Identity = 110/366 (30.05%), Postives = 181/366 (49.45%), Query Frame = 0

Query: 21  AKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVP-TTTIS 80
           A VK  ++   D  +QR+K L+ V+ L+NI+ + P + + L  +   +++L +     + 
Sbjct: 53  AAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLI 112

Query: 81  KFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLMLT 140
                +P VF   +  +      +LT  A  L+ +E  + N        V +L KLLM++
Sbjct: 113 ALLRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNES--EGLAVAKLRKLLMMS 172

Query: 141 GAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKD 200
              ++ +  +  L+ DLGLP  F  T+   YP+YF+V  +      ++  ALEL  W  +
Sbjct: 173 QEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM------DRGPALELTHWDPE 232

Query: 201 LSVS--ELKKREYLEGNVGSRNRNHIAFPMSF-----PRGFDLQKKVMNWVEEWQRLPYI 260
           L+VS  EL + E        RN   I  P+ F     P+G  L +     +  ++ +PYI
Sbjct: 233 LAVSAAELAEEESRAREAEERNL-IIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYI 292

Query: 261 SPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKALVH 320
           SPY +  HL   SD+ EK A  V+HE+L L V K+T  +++ +  E   F   L+  ++ 
Sbjct: 293 SPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIR 352

Query: 321 HPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVVRRPRPGIILASS 379
           HP +FYVS K    +V LREAYK   LVEK+ L+ ++ + +  +  V R PR   +    
Sbjct: 353 HPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEK-MRALVAVPRFPRRAAVGTGE 407

BLAST of HG10011712 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-29
Identity = 103/360 (28.61%), Postives = 181/360 (50.28%), Query Frame = 0

Query: 12  FSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNL 71
           FSQ+   +  K   VRD   D  ++ EK +R+V+   ++I S P  ++ +S +  L + L
Sbjct: 34  FSQSTT-IPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRL 93

Query: 72  KV--PTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQAL--LLHKEESTIHNSQPHRDD 131
            +         F   +P VF  ++  +    + +LT +AL  + H+ E+ +        D
Sbjct: 94  GLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI----PD 153

Query: 132 VVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQ 191
            V RL KL+M++  G++ L  +   + + GLP  F  +++  +P++F++      + GE+
Sbjct: 154 AVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL------IDGEE 213

Query: 192 T--LALELLSWRKDLSVSELKKREYLEGNVGSRNRNHI--AFPMSFPRGFDLQKKVMNWV 251
           T    +E++    +LS+  +++   +E      +   +  +F ++FP GF + K     V
Sbjct: 214 TRDKYIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAV 273

Query: 252 EEWQRLPYISPYENA----FHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEY 311
            +WQRLPY SPYE+        +   ++ EK +VA +HELL L V KK   E I +    
Sbjct: 274 WKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNV 333

Query: 312 LGFGSRLKKALVHHPGIFYVS---NKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLM 357
           +    +LK+ L+ H GIFY+S   N  +  TV LRE YK+  LVE + +   R +   L+
Sbjct: 334 MNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382

BLAST of HG10011712 vs. ExPASy TrEMBL
Match: A0A5A7T0U1 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00230 PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 1.7e-200
Identity = 347/378 (91.80%), Postives = 364/378 (96.30%), Query Frame = 0

Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MILQI RIPHRF+Q RAFVDAKVKWVRDPYLDFAVQREKNL+QVISLKNII SSPL S+P
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVK+TSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDL+VSELKKREYLEGN GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQ LPYISPYENAFHL PNSDQAEKWAVAVLHELLYL +SKKTEKENI+ LG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQY+HLMNKV+
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360

Query: 361 RRPRPGIILASSRVKRQN 379
           R+PRPGIILASSR KR+N
Sbjct: 361 RKPRPGIILASSRGKRRN 378

BLAST of HG10011712 vs. ExPASy TrEMBL
Match: A0A1S3C4Q9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 1.7e-200
Identity = 347/378 (91.80%), Postives = 364/378 (96.30%), Query Frame = 0

Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MILQI RIPHRF+Q RAFVDAKVKWVRDPYLDFAVQREKNL+QVISLKNII SSPL S+P
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVK+TSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDL+VSELKKREYLEGN GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQ LPYISPYENAFHL PNSDQAEKWAVAVLHELLYL +SKKTEKENI+ LG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQY+HLMNKV+
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360

Query: 361 RRPRPGIILASSRVKRQN 379
           R+PRPGIILASSR KR+N
Sbjct: 361 RKPRPGIILASSRGKRRN 378

BLAST of HG10011712 vs. ExPASy TrEMBL
Match: A0A6J1C3P8 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111008095 PE=4 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.6e-193
Identity = 336/382 (87.96%), Postives = 357/382 (93.46%), Query Frame = 0

Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL+  RIP+R SQTR FVDAKVKWVRDPYLDFAVQREKNLRQVISLKN+I S+P KSLP
Sbjct: 1   MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTT+SKFF+LYPSVF QFQPS GLHP VKLT QAL LHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDDVVKRLAKLLMLTGAG+LPL VIERLQWDLGLPY+FIPTLLADYPEYFQVC+V+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALE+LSWRK+LS+SELK+RE  +GNV SR  NHIAFPMS P+GFD +KKVM
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW VAVLHELLYL+VSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
           GFGSR KKALVHHPGIFYVSNKIRTQTVVLREAY+KDFLVEKHPLMGMRHQYIHLMNKVV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKVV 360

Query: 361 RRPRPGIILASSRVKRQNNPFA 383
           RRPRPGIILASSR KRQNNP++
Sbjct: 361 RRPRPGIILASSRGKRQNNPYS 382

BLAST of HG10011712 vs. ExPASy TrEMBL
Match: A0A6J1K6G9 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 333/382 (87.17%), Postives = 352/382 (92.15%), Query Frame = 0

Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL++ R PHR  QTRAFVDAKVKWVRDPYLDF VQREKNLRQVISLKN+I SSP KS+P
Sbjct: 1   MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLK PTT+ISKFF+LYPSVFIQFQPSLGLHPHVKLTSQ+L LHKEE TIHN
Sbjct: 61  LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDD+VKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIP LLADYPEYFQVCS++
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LEGN   RN NHIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW  AVLHELLYLMVSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYIHLMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360

Query: 361 RRPRPGIILASSRVKRQNNPFA 383
           RRPRP IILASSR KRQNNP A
Sbjct: 361 RRPRPRIILASSRGKRQNNPSA 382

BLAST of HG10011712 vs. ExPASy TrEMBL
Match: A0A6J1FNW3 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 7.8e-190
Identity = 334/382 (87.43%), Postives = 350/382 (91.62%), Query Frame = 0

Query: 1   MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
           MIL + R PHR  QTRAFVDAKVKWVRDPYLDF VQRE+NLRQVISLKN+I SSP KS+P
Sbjct: 1   MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREENLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLKVPTT+ISKF +LYPSVFIQFQPSLGLHPHVKLTSQAL LHKEESTIHN
Sbjct: 61  LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SQPHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LEGN   RN  HIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
           NWVEEWQRLPYISPYENAFHL PNSDQAEKW  AVLHELLYLMVSKKTEKENI  LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENISCLGEYL 300

Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
           GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYI LMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIRLMNKAV 360

Query: 361 RRPRPGIILASSRVKRQNNPFA 383
           RRPRP IILASSR KRQNNP A
Sbjct: 361 RRPRPRIILASSRDKRQNNPSA 382

BLAST of HG10011712 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 439.1 bits (1128), Expect = 3.7e-123
Identity = 229/373 (61.39%), Postives = 278/373 (74.53%), Query Frame = 0

Query: 7   RIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSL 66
           ++     Q R FV+A+VKWV D YLD AVQREKNL+QVISLK+ I SSP KSLPLSS+SL
Sbjct: 7   KLARALQQRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSL 66

Query: 67  LKQ--NLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPH 126
           LK   NL +   T + FF+ YPSVF  FQPS     HV+LT QAL LHKEE TIH S P 
Sbjct: 67  LKPLVNLHI---TAAAFFQKYPSVFTTFQPSPSHPLHVRLTPQALTLHKEEETIHLSPPQ 126

Query: 127 RDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLT 186
           R+  V+RL K LMLTGAG LPL V++R ++DLGLP  +I +L+ DYPEYF+V  +KD LT
Sbjct: 127 RNVTVQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLT 186

Query: 187 GEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVE 246
           GE+TLAL + S R +L VSE+++RE        +    I + M+FP+G++L K+V NWVE
Sbjct: 187 GEKTLALTISSRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVE 246

Query: 247 EWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGS 306
           +WQ LPYISPYENAFHL   SDQAEKWAVAVLHELL+L+VSKKTE +N+  LGEYLGFG 
Sbjct: 247 QWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGM 306

Query: 307 RLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVVRRPR 366
           R KKALVHHPGIFY+S+KIRTQTVVLREAY K FL+EKHPLMG+RHQYI+LM+K  R  +
Sbjct: 307 RFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRGKK 366

Query: 367 PGIILASSRVKRQ 378
              +    R  R+
Sbjct: 367 RDYVHGVERSNRK 376

BLAST of HG10011712 vs. TAIR 10
Match: AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 310.8 bits (795), Expect = 1.5e-84
Identity = 159/358 (44.41%), Postives = 239/358 (66.76%), Query Frame = 0

Query: 10  HRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQ 69
           HR     + V+   K+VRD  LD AV+REKNLR ++S+K++I S P KS+P+S ++  K 
Sbjct: 16  HRTFADTSAVEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKD 75

Query: 70  NLKVPTTTISKFFELYPSVFIQFQP-SLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDV 129
           +L+VP   I +F   +PSVF +F P  +G+HPH+ LT + L    +E  ++ S+ ++  +
Sbjct: 76  SLRVPLRPI-EFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGL 135

Query: 130 VKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQT 189
             RL KLLM+    K+PL +++ L+WDLGLP  ++ T++ ++P+YF+V  +K  L G  +
Sbjct: 136 ADRLLKLLMINRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRV--IKSKLRG-CS 195

Query: 190 LALELLSWRKDLSVSELKKR-------EYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMN 249
             LEL+ W  + +VS L+K+       EY +G+        IAFPM F  GF + KK+  
Sbjct: 196 GELELVCWSNEHAVSVLEKKARTLRKGEYTKGSA-------IAFPMKFSNGFVVDKKMKK 255

Query: 250 WVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLG 309
           W+++WQ+LPYISPYENA HL   SD+++KWA AVLHE++ L VSKK EK+ I +LGE++G
Sbjct: 256 WIDDWQKLPYISPYENALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMG 315

Query: 310 FGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKV 360
             SR K+ L +HPGIFY+S+K+RT TVVLR+ YK+  L+E + L+  R++Y+ LMN V
Sbjct: 316 LRSRFKRVLHNHPGIFYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTV 362

BLAST of HG10011712 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 249.6 bits (636), Expect = 4.1e-66
Identity = 142/351 (40.46%), Postives = 215/351 (61.25%), Query Frame = 0

Query: 12  FSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNL 71
           + Q    V+ K+KWV+D  LD  V REK+LR V +L ++I++SP   LP+  +   +  L
Sbjct: 26  YQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQL 85

Query: 72  KVP-TTTISKFFELYPSVFIQ--FQPSLGLH-PHVKLTSQALLLHKEESTIHNSQPHRDD 131
            +P    +S F   YP++F++  +  S G   P   LT + + L+ EE  +  S+ +  D
Sbjct: 86  GLPQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDV--SRVNERD 145

Query: 132 VVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQ 191
           V+ RL KLLMLT    L L+ I+ L+WDLGLPY +  +L+  +P+ F +  +   L G  
Sbjct: 146 VLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG-- 205

Query: 192 TLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEWQ 251
              L+L+ W + L+VS+++ RE    +VG  N   +AFP+ F RGF L++K + W++EWQ
Sbjct: 206 ---LKLIHWDEHLAVSQMQLRE----DVG--NDERMAFPVKFTRGFGLKRKSIEWLQEWQ 265

Query: 252 RLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLK 311
           RLPY SPY +A HL P +D +EK  V V HELL+L + KKTE++N+  L +      +  
Sbjct: 266 RLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFT 325

Query: 312 KALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNK 359
           K    HPGIFY+S K  TQTV+LREAY +  L+EKHPL+ +R ++ ++MN+
Sbjct: 326 KVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNE 363

BLAST of HG10011712 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 218.8 bits (556), Expect = 7.8e-57
Identity = 131/367 (35.69%), Postives = 204/367 (55.59%), Query Frame = 0

Query: 2   ILQIIRIPHRFSQTR---AFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKS 61
           +  + ++ H+  Q R   A    ++KWV++  LD  +  E +L+    LK+ I  SP   
Sbjct: 9   LFSVSKLFHQHQQWRGMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGF 68

Query: 62  LPLSSVSLLKQNLKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKLTSQALLLHKEEST 121
           L   SV+  ++ L + T  + +F   YP++F +F        P  KLT  AL+L  +E  
Sbjct: 69  LTAKSVADWQKLLGL-TVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEI 128

Query: 122 IHNSQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVC 181
           IH  Q H  D V+RL ++LM+  +  + L  +  L++DLGLP  +  TL+  YP++F  C
Sbjct: 129 IH--QSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF--C 188

Query: 182 SVKDCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVG--------SRNRNHIAFPMSF 241
            VK          L+L+ WR + + S L+KR       G         R ++ + FPMSF
Sbjct: 189 FVK---ASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSF 248

Query: 242 PRGFDLQKKVMNWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTE 301
           PRG+  QKKV  W++E+Q+LPYISPY++  ++ P SD  EK AVAVLHELL L + KKT+
Sbjct: 249 PRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTK 308

Query: 302 KENIFYLGEYLGFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMR 357
           +  +  +   L    +  +    +PGIFY+S K +T TV+L+E Y++  LV+ HPL  +R
Sbjct: 309 RNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLR 367

BLAST of HG10011712 vs. TAIR 10
Match: AT3G58520.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 206.1 bits (523), Expect = 5.2e-53
Identity = 126/367 (34.33%), Postives = 199/367 (54.22%), Query Frame = 0

Query: 2   ILQIIRIPHRFSQTR---AFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKS 61
           +  + ++ H+  Q R   A    ++KWV++  LD  +  E +L+    LK+ I  SP   
Sbjct: 9   LFSVSKLFHQHQQWRGMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSP--- 68

Query: 62  LPLSSVSLLKQNLKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKLTSQALLLHKEEST 121
               +   +++N          + + YP++F +F        P  KLT  AL+L  +E  
Sbjct: 69  ----TGITIRENFN------CYWNKRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEI 128

Query: 122 IHNSQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVC 181
           IH  Q H  D V+RL ++LM+  +  + L  +  L++DLGLP  +  TL+  YP++F  C
Sbjct: 129 IH--QSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF--C 188

Query: 182 SVKDCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVG--------SRNRNHIAFPMSF 241
            VK          L+L+ WR + + S L+KR       G         R ++ + FPMSF
Sbjct: 189 FVK---ASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSF 248

Query: 242 PRGFDLQKKVMNWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTE 301
           PRG+  QKKV  W++E+Q+LPYISPY++  ++ P SD  EK AVAVLHELL L + KKT+
Sbjct: 249 PRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTK 308

Query: 302 KENIFYLGEYLGFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMR 357
           +  +  +   L    +  +    +PGIFY+S K +T TV+L+E Y++  LV+ HPL  +R
Sbjct: 309 RNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLR 355

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038906250.17.0e-20192.15protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida][more]
XP_008456527.13.5e-20091.80PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0036503.1 prot... [more]
XP_022136370.15.4e-19387.96protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia][more]
KAG7031364.17.8e-19288.22Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... [more]
XP_022994938.12.3e-19187.17protein WHAT'S THIS FACTOR 1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9ZUZ64.8e-5135.71Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
A0MFS51.3e-3532.49Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q65XL52.4e-3430.68Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
B6TTV89.0e-3430.05Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Q689D61.8e-2928.61Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Match NameE-valueIdentityDescription
A0A5A7T0U11.7e-20091.80Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3C4Q91.7e-20091.80protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4... [more]
A0A6J1C3P82.6e-19387.96protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110080... [more]
A0A6J1K6G91.1e-19187.17protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV... [more]
A0A6J1FNW37.8e-19087.43protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT4G24320.13.7e-12361.39Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT1G71850.11.5e-8444.41Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G48040.14.1e-6640.46Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT3G58520.17.8e-5735.69Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT3G58520.25.2e-5334.33Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 26..358
e-value: 1.7E-111
score: 372.3
NoneNo IPR availablePANTHERPTHR31476:SF19UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 4..370
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 4..370

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10011712.1HG10011712.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding