Homology
BLAST of HG10011712 vs. NCBI nr
Match:
XP_038906250.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida])
HSP 1 Score: 710.7 bits (1833), Expect = 7.0e-201
Identity = 352/382 (92.15%), Postives = 364/382 (95.29%), Query Frame = 0
Query: 1 MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
M LQI RIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNII SSPLK LP
Sbjct: 1 MFLQITRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIVSSPLKFLP 60
Query: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
LS+VSLLKQNLK+PTTTISKFFELYPSVFIQFQPS+G HPHVKLTSQALLLHKEESTIH
Sbjct: 61 LSNVSLLKQNLKIPTTTISKFFELYPSVFIQFQPSVGFHPHVKLTSQALLLHKEESTIHI 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
SQPHRDDVVKRLAKLLMLTGAGKLPL +IERLQWDLGLPYRFIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYIIERLQWDLGLPYRFIPTLLADYPEYFQVCSVR 180
Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
D LTGEQTLALELLSWRKDLSVSELK+RE LEGN+GSRNR+HIAF MSFPRGFDLQKKVM
Sbjct: 181 DYLTGEQTLALELLSWRKDLSVSELKRRECLEGNLGSRNRSHIAFRMSFPRGFDLQKKVM 240
Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
NWVEEWQRLPYISPYENAFHL PNSDQAEKWAVAVLHELLYLM+SKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMISKKTEKENIFCLGEYL 300
Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
GFGSR KKALVHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMG RHQY+HLMNKVV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLIEKHPLMGTRHQYLHLMNKVV 360
Query: 361 RRPRPGIILASSRVKRQNNPFA 383
RRPRPGIILASSR KR+ FA
Sbjct: 361 RRPRPGIILASSRAKRRKTLFA 382
BLAST of HG10011712 vs. NCBI nr
Match:
XP_008456527.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0036503.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYJ99978.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])
HSP 1 Score: 708.4 bits (1827), Expect = 3.5e-200
Identity = 347/378 (91.80%), Postives = 364/378 (96.30%), Query Frame = 0
Query: 1 MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
MILQI RIPHRF+Q RAFVDAKVKWVRDPYLDFAVQREKNL+QVISLKNII SSPL S+P
Sbjct: 1 MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60
Query: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVK+TSQALLLHKEESTIHN
Sbjct: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180
Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
DCLTGEQTLALELLSWRKDL+VSELKKREYLEGN GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240
Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
NWVEEWQ LPYISPYENAFHL PNSDQAEKWAVAVLHELLYL +SKKTEKENI+ LG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300
Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQY+HLMNKV+
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360
Query: 361 RRPRPGIILASSRVKRQN 379
R+PRPGIILASSR KR+N
Sbjct: 361 RKPRPGIILASSRGKRRN 378
BLAST of HG10011712 vs. NCBI nr
Match:
XP_022136370.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])
HSP 1 Score: 684.5 bits (1765), Expect = 5.4e-193
Identity = 336/382 (87.96%), Postives = 357/382 (93.46%), Query Frame = 0
Query: 1 MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
MIL+ RIP+R SQTR FVDAKVKWVRDPYLDFAVQREKNLRQVISLKN+I S+P KSLP
Sbjct: 1 MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60
Query: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
LSSVSLLKQNLKVPTTT+SKFF+LYPSVF QFQPS GLHP VKLT QAL LHKEESTIHN
Sbjct: 61 LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
SQPHRDDVVKRLAKLLMLTGAG+LPL VIERLQWDLGLPY+FIPTLLADYPEYFQVC+V+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180
Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
DC TGEQTLALE+LSWRK+LS+SELK+RE +GNV SR NHIAFPMS P+GFD +KKVM
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240
Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
NWVEEWQRLPYISPYENAFHL PNSDQAEKW VAVLHELLYL+VSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300
Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
GFGSR KKALVHHPGIFYVSNKIRTQTVVLREAY+KDFLVEKHPLMGMRHQYIHLMNKVV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKVV 360
Query: 361 RRPRPGIILASSRVKRQNNPFA 383
RRPRPGIILASSR KRQNNP++
Sbjct: 361 RRPRPGIILASSRGKRQNNPYS 382
BLAST of HG10011712 vs. NCBI nr
Match:
KAG7031364.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 680.6 bits (1755), Expect = 7.8e-192
Identity = 337/382 (88.22%), Postives = 352/382 (92.15%), Query Frame = 0
Query: 1 MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
MIL + R PHR QTRAFVDAKVKWVRDPYLDF VQREKNLRQVISLKN+I SSP KS+P
Sbjct: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
Query: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
LSSVSL++QNLKVPTT+ISKF +LYPSVFIQFQPSLGLHPHVKLTSQAL LHKEESTIHN
Sbjct: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
SQPHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
DC TGEQTLALELLSWR+DLSVSELKKR LEGN RN HIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
NWVEEWQRLPYISPYENAFHL PNSDQAEKW AVLHELLYLMVSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYIHLMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
Query: 361 RRPRPGIILASSRVKRQNNPFA 383
RRPRP IILASSR KRQNNP A
Sbjct: 361 RRPRPRIILASSRDKRQNNPSA 382
BLAST of HG10011712 vs. NCBI nr
Match:
XP_022994938.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita maxima])
HSP 1 Score: 679.1 bits (1751), Expect = 2.3e-191
Identity = 333/382 (87.17%), Postives = 352/382 (92.15%), Query Frame = 0
Query: 1 MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
MIL++ R PHR QTRAFVDAKVKWVRDPYLDF VQREKNLRQVISLKN+I SSP KS+P
Sbjct: 1 MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
Query: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
LSSVSL++QNLK PTT+ISKFF+LYPSVFIQFQPSLGLHPHVKLTSQ+L LHKEE TIHN
Sbjct: 61 LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
SQPHRDD+VKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIP LLADYPEYFQVCS++
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180
Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
DC TGEQTLALELLSWR+DLSVSELKKR LEGN RN NHIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240
Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
NWVEEWQRLPYISPYENAFHL PNSDQAEKW AVLHELLYLMVSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYIHLMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
Query: 361 RRPRPGIILASSRVKRQNNPFA 383
RRPRP IILASSR KRQNNP A
Sbjct: 361 RRPRPRIILASSRGKRQNNPSA 382
BLAST of HG10011712 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 203.4 bits (516), Expect = 4.8e-51
Identity = 125/350 (35.71%), Postives = 198/350 (56.57%), Query Frame = 0
Query: 13 SQTRAFVDAKVKWVRDPYLDFA--VQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQN 72
+Q R +VD +KW RDPY D + R L+ V+SLKN I P + +P+S++S +
Sbjct: 19 TQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQ 78
Query: 73 LKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVV 132
V +T I+ F +PS+F +F P L P +LT +A L ++E ++ Q DD+
Sbjct: 79 FDV-STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVY--QTSADDLR 138
Query: 133 KRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTL 192
RL KL++++ LPL++++ ++W LGLP ++ + F+ ++D G + L
Sbjct: 139 DRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMED---GVKGL 198
Query: 193 ALELLSWRKDLSV---SELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEW 252
A++ K LSV + +KKR G + I FP+ +G L+ K+ +W+ E+
Sbjct: 199 AVDYNGGDKVLSVLQKNAMKKRR------GEVSLEEIEFPLFPSKGCRLRVKIEDWLMEF 258
Query: 253 QRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRL 312
Q+LPY+SPY++ L P+SD AEK V LHELL L V E++ + L ++ G ++
Sbjct: 259 QKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKV 318
Query: 313 KKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLM 357
KA HP IFY+S K +T T +LRE Y+ VE HP++G+R +YI LM
Sbjct: 319 HKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLM 355
BLAST of HG10011712 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 1.3e-35
Identity = 116/357 (32.49%), Postives = 183/357 (51.26%), Query Frame = 0
Query: 19 VDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVPTTTI 78
V A VK ++ D VQR+K L+ V++++ I+ S P + + L + +++L +
Sbjct: 72 VRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKR-- 131
Query: 79 SKFFEL---YPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKL 138
+F L YP VF + K+TS+A L+ +E I N D +V +L KL
Sbjct: 132 RRFIALLRKYPGVF-EIVEEGAYSLRFKMTSEAERLYLDEMRIRNEL--EDVLVVKLRKL 191
Query: 139 LMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLS 198
+M++ ++ L I L+ DLGLP F T+ YP+YF+V + + ALEL
Sbjct: 192 VMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV------VPTPRGPALELTH 251
Query: 199 WRKDLSVSELKKREYLEGNVGSRNRNHIA-FPMSF-----PRGFDLQKKVMNWVEEWQRL 258
W +L+VS + E S RN I P F PRG +L K + +++ +
Sbjct: 252 WDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 311
Query: 259 PYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKA 318
YISPY++ HL + + EK A V+HELL L K+T +++ + E F +L+
Sbjct: 312 QYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGM 371
Query: 319 LVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVVRRPRPG 367
L+ HP +FYVS K +V LREAY+ L++K PL ++ + L++ V R PR G
Sbjct: 372 LIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVS-VPRFPRRG 416
BLAST of HG10011712 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 2.4e-34
Identity = 112/365 (30.68%), Postives = 182/365 (49.86%), Query Frame = 0
Query: 21 AKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVP-TTTIS 80
A VK ++ D +QR+K L+ V+ L+NI+ S+P + + L + +++L + +
Sbjct: 59 AAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLI 118
Query: 81 KFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLMLT 140
+ +P VF + + +LT A L+ +E +H V +L KLLM++
Sbjct: 119 ALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDE--LHLKNESEGLAVTKLRKLLMMS 178
Query: 141 GAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKD 200
++ + I L+ DLGLP F T+ YP+YF+V + ++ LEL W +
Sbjct: 179 QDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQM------DRGPGLELTHWDPE 238
Query: 201 LSVSELKKREYLEGNVGSRNRNHIA-FPMSF-----PRGFDLQKKVMNWVEEWQRLPYIS 260
L+VS + E + RN I P+ F P+G L + V +++ +PYIS
Sbjct: 239 LAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYIS 298
Query: 261 PYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKALVHH 320
PY + HL S + EK A V+HE+L L + K+T +++ + E F L+ L+ H
Sbjct: 299 PYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 358
Query: 321 PGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVVRRPRPGIILASSR 379
P +FYVS K +V LREAYK LVEK L+ ++ + + + V R PR G+ S
Sbjct: 359 PDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEK-MRALVAVPRFPRRGVPATSEE 413
BLAST of HG10011712 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 9.0e-34
Identity = 110/366 (30.05%), Postives = 181/366 (49.45%), Query Frame = 0
Query: 21 AKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNLKVP-TTTIS 80
A VK ++ D +QR+K L+ V+ L+NI+ + P + + L + +++L + +
Sbjct: 53 AAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLI 112
Query: 81 KFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLMLT 140
+P VF + + +LT A L+ +E + N V +L KLLM++
Sbjct: 113 ALLRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNES--EGLAVAKLRKLLMMS 172
Query: 141 GAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKD 200
++ + + L+ DLGLP F T+ YP+YF+V + ++ ALEL W +
Sbjct: 173 QEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM------DRGPALELTHWDPE 232
Query: 201 LSVS--ELKKREYLEGNVGSRNRNHIAFPMSF-----PRGFDLQKKVMNWVEEWQRLPYI 260
L+VS EL + E RN I P+ F P+G L + + ++ +PYI
Sbjct: 233 LAVSAAELAEEESRAREAEERNL-IIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYI 292
Query: 261 SPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLKKALVH 320
SPY + HL SD+ EK A V+HE+L L V K+T +++ + E F L+ ++
Sbjct: 293 SPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIR 352
Query: 321 HPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVVRRPRPGIILASS 379
HP +FYVS K +V LREAYK LVEK+ L+ ++ + + + V R PR +
Sbjct: 353 HPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEK-MRALVAVPRFPRRAAVGTGE 407
BLAST of HG10011712 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 131.7 bits (330), Expect = 1.8e-29
Identity = 103/360 (28.61%), Postives = 181/360 (50.28%), Query Frame = 0
Query: 12 FSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNL 71
FSQ+ + K VRD D ++ EK +R+V+ ++I S P ++ +S + L + L
Sbjct: 34 FSQSTT-IPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRL 93
Query: 72 KV--PTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQAL--LLHKEESTIHNSQPHRDD 131
+ F +P VF ++ + + +LT +AL + H+ E+ + D
Sbjct: 94 GLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI----PD 153
Query: 132 VVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQ 191
V RL KL+M++ G++ L + + + GLP F +++ +P++F++ + GE+
Sbjct: 154 AVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL------IDGEE 213
Query: 192 T--LALELLSWRKDLSVSELKKREYLEGNVGSRNRNHI--AFPMSFPRGFDLQKKVMNWV 251
T +E++ +LS+ +++ +E + + +F ++FP GF + K V
Sbjct: 214 TRDKYIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAV 273
Query: 252 EEWQRLPYISPYENA----FHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEY 311
+WQRLPY SPYE+ + ++ EK +VA +HELL L V KK E I +
Sbjct: 274 WKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNV 333
Query: 312 LGFGSRLKKALVHHPGIFYVS---NKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLM 357
+ +LK+ L+ H GIFY+S N + TV LRE YK+ LVE + + R + L+
Sbjct: 334 MNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382
BLAST of HG10011712 vs. ExPASy TrEMBL
Match:
A0A5A7T0U1 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00230 PE=4 SV=1)
HSP 1 Score: 708.4 bits (1827), Expect = 1.7e-200
Identity = 347/378 (91.80%), Postives = 364/378 (96.30%), Query Frame = 0
Query: 1 MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
MILQI RIPHRF+Q RAFVDAKVKWVRDPYLDFAVQREKNL+QVISLKNII SSPL S+P
Sbjct: 1 MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60
Query: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVK+TSQALLLHKEESTIHN
Sbjct: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180
Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
DCLTGEQTLALELLSWRKDL+VSELKKREYLEGN GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240
Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
NWVEEWQ LPYISPYENAFHL PNSDQAEKWAVAVLHELLYL +SKKTEKENI+ LG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300
Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQY+HLMNKV+
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360
Query: 361 RRPRPGIILASSRVKRQN 379
R+PRPGIILASSR KR+N
Sbjct: 361 RKPRPGIILASSRGKRRN 378
BLAST of HG10011712 vs. ExPASy TrEMBL
Match:
A0A1S3C4Q9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4 SV=1)
HSP 1 Score: 708.4 bits (1827), Expect = 1.7e-200
Identity = 347/378 (91.80%), Postives = 364/378 (96.30%), Query Frame = 0
Query: 1 MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
MILQI RIPHRF+Q RAFVDAKVKWVRDPYLDFAVQREKNL+QVISLKNII SSPL S+P
Sbjct: 1 MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60
Query: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVK+TSQALLLHKEESTIHN
Sbjct: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180
Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
DCLTGEQTLALELLSWRKDL+VSELKKREYLEGN GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240
Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
NWVEEWQ LPYISPYENAFHL PNSDQAEKWAVAVLHELLYL +SKKTEKENI+ LG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300
Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQY+HLMNKV+
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360
Query: 361 RRPRPGIILASSRVKRQN 379
R+PRPGIILASSR KR+N
Sbjct: 361 RKPRPGIILASSRGKRRN 378
BLAST of HG10011712 vs. ExPASy TrEMBL
Match:
A0A6J1C3P8 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111008095 PE=4 SV=1)
HSP 1 Score: 684.5 bits (1765), Expect = 2.6e-193
Identity = 336/382 (87.96%), Postives = 357/382 (93.46%), Query Frame = 0
Query: 1 MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
MIL+ RIP+R SQTR FVDAKVKWVRDPYLDFAVQREKNLRQVISLKN+I S+P KSLP
Sbjct: 1 MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60
Query: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
LSSVSLLKQNLKVPTTT+SKFF+LYPSVF QFQPS GLHP VKLT QAL LHKEESTIHN
Sbjct: 61 LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
SQPHRDDVVKRLAKLLMLTGAG+LPL VIERLQWDLGLPY+FIPTLLADYPEYFQVC+V+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180
Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
DC TGEQTLALE+LSWRK+LS+SELK+RE +GNV SR NHIAFPMS P+GFD +KKVM
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240
Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
NWVEEWQRLPYISPYENAFHL PNSDQAEKW VAVLHELLYL+VSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300
Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
GFGSR KKALVHHPGIFYVSNKIRTQTVVLREAY+KDFLVEKHPLMGMRHQYIHLMNKVV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKVV 360
Query: 361 RRPRPGIILASSRVKRQNNPFA 383
RRPRPGIILASSR KRQNNP++
Sbjct: 361 RRPRPGIILASSRGKRQNNPYS 382
BLAST of HG10011712 vs. ExPASy TrEMBL
Match:
A0A6J1K6G9 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV=1)
HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 333/382 (87.17%), Postives = 352/382 (92.15%), Query Frame = 0
Query: 1 MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
MIL++ R PHR QTRAFVDAKVKWVRDPYLDF VQREKNLRQVISLKN+I SSP KS+P
Sbjct: 1 MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
Query: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
LSSVSL++QNLK PTT+ISKFF+LYPSVFIQFQPSLGLHPHVKLTSQ+L LHKEE TIHN
Sbjct: 61 LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
SQPHRDD+VKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIP LLADYPEYFQVCS++
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180
Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
DC TGEQTLALELLSWR+DLSVSELKKR LEGN RN NHIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240
Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
NWVEEWQRLPYISPYENAFHL PNSDQAEKW AVLHELLYLMVSKKTEKENIF LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYIHLMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
Query: 361 RRPRPGIILASSRVKRQNNPFA 383
RRPRP IILASSR KRQNNP A
Sbjct: 361 RRPRPRIILASSRGKRQNNPSA 382
BLAST of HG10011712 vs. ExPASy TrEMBL
Match:
A0A6J1FNW3 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 SV=1)
HSP 1 Score: 672.9 bits (1735), Expect = 7.8e-190
Identity = 334/382 (87.43%), Postives = 350/382 (91.62%), Query Frame = 0
Query: 1 MILQIIRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLP 60
MIL + R PHR QTRAFVDAKVKWVRDPYLDF VQRE+NLRQVISLKN+I SSP KS+P
Sbjct: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREENLRQVISLKNLIVSSPFKSVP 60
Query: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHN 120
LSSVSL++QNLKVPTT+ISKF +LYPSVFIQFQPSLGLHPHVKLTSQAL LHKEESTIHN
Sbjct: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
SQPHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+FIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
DC TGEQTLALELLSWR+DLSVSELKKR LEGN RN HIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
Query: 241 NWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYL 300
NWVEEWQRLPYISPYENAFHL PNSDQAEKW AVLHELLYLMVSKKTEKENI LGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENISCLGEYL 300
Query: 301 GFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVV 360
GFGSR KKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYI LMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIRLMNKAV 360
Query: 361 RRPRPGIILASSRVKRQNNPFA 383
RRPRP IILASSR KRQNNP A
Sbjct: 361 RRPRPRIILASSRDKRQNNPSA 382
BLAST of HG10011712 vs. TAIR 10
Match:
AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 439.1 bits (1128), Expect = 3.7e-123
Identity = 229/373 (61.39%), Postives = 278/373 (74.53%), Query Frame = 0
Query: 7 RIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSL 66
++ Q R FV+A+VKWV D YLD AVQREKNL+QVISLK+ I SSP KSLPLSS+SL
Sbjct: 7 KLARALQQRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSL 66
Query: 67 LKQ--NLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKLTSQALLLHKEESTIHNSQPH 126
LK NL + T + FF+ YPSVF FQPS HV+LT QAL LHKEE TIH S P
Sbjct: 67 LKPLVNLHI---TAAAFFQKYPSVFTTFQPSPSHPLHVRLTPQALTLHKEEETIHLSPPQ 126
Query: 127 RDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLT 186
R+ V+RL K LMLTGAG LPL V++R ++DLGLP +I +L+ DYPEYF+V +KD LT
Sbjct: 127 RNVTVQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLT 186
Query: 187 GEQTLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVE 246
GE+TLAL + S R +L VSE+++RE + I + M+FP+G++L K+V NWVE
Sbjct: 187 GEKTLALTISSRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKNWVE 246
Query: 247 EWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGS 306
+WQ LPYISPYENAFHL SDQAEKWAVAVLHELL+L+VSKKTE +N+ LGEYLGFG
Sbjct: 247 QWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGM 306
Query: 307 RLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKVVRRPR 366
R KKALVHHPGIFY+S+KIRTQTVVLREAY K FL+EKHPLMG+RHQYI+LM+K R +
Sbjct: 307 RFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRGKK 366
Query: 367 PGIILASSRVKRQ 378
+ R R+
Sbjct: 367 RDYVHGVERSNRK 376
BLAST of HG10011712 vs. TAIR 10
Match:
AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 310.8 bits (795), Expect = 1.5e-84
Identity = 159/358 (44.41%), Postives = 239/358 (66.76%), Query Frame = 0
Query: 10 HRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQ 69
HR + V+ K+VRD LD AV+REKNLR ++S+K++I S P KS+P+S ++ K
Sbjct: 16 HRTFADTSAVEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKD 75
Query: 70 NLKVPTTTISKFFELYPSVFIQFQP-SLGLHPHVKLTSQALLLHKEESTIHNSQPHRDDV 129
+L+VP I +F +PSVF +F P +G+HPH+ LT + L +E ++ S+ ++ +
Sbjct: 76 SLRVPLRPI-EFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGL 135
Query: 130 VKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQT 189
RL KLLM+ K+PL +++ L+WDLGLP ++ T++ ++P+YF+V +K L G +
Sbjct: 136 ADRLLKLLMINRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRV--IKSKLRG-CS 195
Query: 190 LALELLSWRKDLSVSELKKR-------EYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMN 249
LEL+ W + +VS L+K+ EY +G+ IAFPM F GF + KK+
Sbjct: 196 GELELVCWSNEHAVSVLEKKARTLRKGEYTKGSA-------IAFPMKFSNGFVVDKKMKK 255
Query: 250 WVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLG 309
W+++WQ+LPYISPYENA HL SD+++KWA AVLHE++ L VSKK EK+ I +LGE++G
Sbjct: 256 WIDDWQKLPYISPYENALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMG 315
Query: 310 FGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNKV 360
SR K+ L +HPGIFY+S+K+RT TVVLR+ YK+ L+E + L+ R++Y+ LMN V
Sbjct: 316 LRSRFKRVLHNHPGIFYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTV 362
BLAST of HG10011712 vs. TAIR 10
Match:
AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 249.6 bits (636), Expect = 4.1e-66
Identity = 142/351 (40.46%), Postives = 215/351 (61.25%), Query Frame = 0
Query: 12 FSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKSLPLSSVSLLKQNL 71
+ Q V+ K+KWV+D LD V REK+LR V +L ++I++SP LP+ + + L
Sbjct: 26 YQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQL 85
Query: 72 KVP-TTTISKFFELYPSVFIQ--FQPSLGLH-PHVKLTSQALLLHKEESTIHNSQPHRDD 131
+P +S F YP++F++ + S G P LT + + L+ EE + S+ + D
Sbjct: 86 GLPQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDV--SRVNERD 145
Query: 132 VVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQ 191
V+ RL KLLMLT L L+ I+ L+WDLGLPY + +L+ +P+ F + + L G
Sbjct: 146 VLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG-- 205
Query: 192 TLALELLSWRKDLSVSELKKREYLEGNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEWQ 251
L+L+ W + L+VS+++ RE +VG N +AFP+ F RGF L++K + W++EWQ
Sbjct: 206 ---LKLIHWDEHLAVSQMQLRE----DVG--NDERMAFPVKFTRGFGLKRKSIEWLQEWQ 265
Query: 252 RLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFYLGEYLGFGSRLK 311
RLPY SPY +A HL P +D +EK V V HELL+L + KKTE++N+ L + +
Sbjct: 266 RLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFT 325
Query: 312 KALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYIHLMNK 359
K HPGIFY+S K TQTV+LREAY + L+EKHPL+ +R ++ ++MN+
Sbjct: 326 KVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNE 363
BLAST of HG10011712 vs. TAIR 10
Match:
AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 218.8 bits (556), Expect = 7.8e-57
Identity = 131/367 (35.69%), Postives = 204/367 (55.59%), Query Frame = 0
Query: 2 ILQIIRIPHRFSQTR---AFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKS 61
+ + ++ H+ Q R A ++KWV++ LD + E +L+ LK+ I SP
Sbjct: 9 LFSVSKLFHQHQQWRGMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGF 68
Query: 62 LPLSSVSLLKQNLKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKLTSQALLLHKEEST 121
L SV+ ++ L + T + +F YP++F +F P KLT AL+L +E
Sbjct: 69 LTAKSVADWQKLLGL-TVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEI 128
Query: 122 IHNSQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVC 181
IH Q H D V+RL ++LM+ + + L + L++DLGLP + TL+ YP++F C
Sbjct: 129 IH--QSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF--C 188
Query: 182 SVKDCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVG--------SRNRNHIAFPMSF 241
VK L+L+ WR + + S L+KR G R ++ + FPMSF
Sbjct: 189 FVK---ASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSF 248
Query: 242 PRGFDLQKKVMNWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTE 301
PRG+ QKKV W++E+Q+LPYISPY++ ++ P SD EK AVAVLHELL L + KKT+
Sbjct: 249 PRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTK 308
Query: 302 KENIFYLGEYLGFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMR 357
+ + + L + + +PGIFY+S K +T TV+L+E Y++ LV+ HPL +R
Sbjct: 309 RNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLR 367
BLAST of HG10011712 vs. TAIR 10
Match:
AT3G58520.2 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 206.1 bits (523), Expect = 5.2e-53
Identity = 126/367 (34.33%), Postives = 199/367 (54.22%), Query Frame = 0
Query: 2 ILQIIRIPHRFSQTR---AFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIASSPLKS 61
+ + ++ H+ Q R A ++KWV++ LD + E +L+ LK+ I SP
Sbjct: 9 LFSVSKLFHQHQQWRGMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSP--- 68
Query: 62 LPLSSVSLLKQNLKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKLTSQALLLHKEEST 121
+ +++N + + YP++F +F P KLT AL+L +E
Sbjct: 69 ----TGITIRENFN------CYWNKRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEI 128
Query: 122 IHNSQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFIPTLLADYPEYFQVC 181
IH Q H D V+RL ++LM+ + + L + L++DLGLP + TL+ YP++F C
Sbjct: 129 IH--QSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF--C 188
Query: 182 SVKDCLTGEQTLALELLSWRKDLSVSELKKREYLEGNVG--------SRNRNHIAFPMSF 241
VK L+L+ WR + + S L+KR G R ++ + FPMSF
Sbjct: 189 FVK---ASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSF 248
Query: 242 PRGFDLQKKVMNWVEEWQRLPYISPYENAFHLVPNSDQAEKWAVAVLHELLYLMVSKKTE 301
PRG+ QKKV W++E+Q+LPYISPY++ ++ P SD EK AVAVLHELL L + KKT+
Sbjct: 249 PRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTK 308
Query: 302 KENIFYLGEYLGFGSRLKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMR 357
+ + + L + + +PGIFY+S K +T TV+L+E Y++ LV+ HPL +R
Sbjct: 309 RNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLR 355
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038906250.1 | 7.0e-201 | 92.15 | protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida] | [more] |
XP_008456527.1 | 3.5e-200 | 91.80 | PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0036503.1 prot... | [more] |
XP_022136370.1 | 5.4e-193 | 87.96 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia] | [more] |
KAG7031364.1 | 7.8e-192 | 88.22 | Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... | [more] |
XP_022994938.1 | 2.3e-191 | 87.17 | protein WHAT'S THIS FACTOR 1 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9ZUZ6 | 4.8e-51 | 35.71 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
A0MFS5 | 1.3e-35 | 32.49 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
Q65XL5 | 2.4e-34 | 30.68 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
B6TTV8 | 9.0e-34 | 30.05 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
Q689D6 | 1.8e-29 | 28.61 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7T0U1 | 1.7e-200 | 91.80 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A1S3C4Q9 | 1.7e-200 | 91.80 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4... | [more] |
A0A6J1C3P8 | 2.6e-193 | 87.96 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110080... | [more] |
A0A6J1K6G9 | 1.1e-191 | 87.17 | protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV... | [more] |
A0A6J1FNW3 | 7.8e-190 | 87.43 | protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |
AT4G24320.1 | 3.7e-123 | 61.39 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT1G71850.1 | 1.5e-84 | 44.41 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G48040.1 | 4.1e-66 | 40.46 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT3G58520.1 | 7.8e-57 | 35.69 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT3G58520.2 | 5.2e-53 | 34.33 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |