Homology
BLAST of HG10010338 vs. NCBI nr
Match:
XP_038875319.1 (pentatricopeptide repeat-containing protein At4g15720 isoform X1 [Benincasa hispida])
HSP 1 Score: 1124.4 bits (2907), Expect = 0.0e+00
Identity = 552/603 (91.54%), Postives = 580/603 (96.19%), Query Frame = 0
Query: 1 MLKRNLHFALTRPCLSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTV 60
MLKRNLHFALTRPCLSR+NER SFQTI+NLSR+LR CNDL+SSISTHSIALKLGFLN+TV
Sbjct: 1 MLKRNLHFALTRPCLSRKNERPSFQTIENLSRYLRECNDLMSSISTHSIALKLGFLNYTV 60
Query: 61 AVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSS 120
VNHLINCYVRFRNVATAH+LFDEMPNPNVVSWTSLMAGY++NGRP TALLLFRAMSRS
Sbjct: 61 PVNHLINCYVRFRNVATAHQLFDEMPNPNVVSWTSLMAGYVNNGRPTTALLLFRAMSRSP 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKAR 180
+VPNDFTF TAIKACSILSNLRHGEK HA+VEIFGYGGN+VVCSSLI MYGKCNDVV+AR
Sbjct: 121 IVPNDFTFTTAIKACSILSNLRHGEKLHAHVEIFGYGGNVVVCSSLIDMYGKCNDVVRAR 180
Query: 181 SVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASL 240
SVFNSMSCKNIVSW SMIAAYAQNA+GDDALKVFREFSS SSEHPNP+MLASVISACASL
Sbjct: 181 SVFNSMSCKNIVSWTSMIAAYAQNAYGDDALKVFREFSSWSSEHPNPHMLASVISACASL 240
Query: 241 GRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSII 300
GRL+SGKV+HGAA+RLG DSS+VVASVLVDMYAKCG+LEYSDKVFNRISNPSVIPYTS+I
Sbjct: 241 GRLISGKVMHGAAVRLGSDSSNVVASVLVDMYAKCGNLEYSDKVFNRISNPSVIPYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGI 360
VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYE+YGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYEKYGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKA 420
MPE KHYTCVVDMLARAGQLDKAY+LAKSMEV SDDKALLWGALLSASRCHGRVDIAA+A
Sbjct: 361 MPEIKHYTCVVDMLARAGQLDKAYELAKSMEVVSDDKALLWGALLSASRCHGRVDIAAEA 420
Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYV 480
C+QLVNSN QVAGAYVTLSNAYA AGDMEKA RLRVEMKHTGVQKEPGCSWIEIKDSSYV
Sbjct: 421 CKQLVNSNEQVAGAYVTLSNAYALAGDMEKAQRLRVEMKHTGVQKEPGCSWIEIKDSSYV 480
Query: 481 FYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLA 540
FYAG+ITS PRGDEVL LLRELDRKM +RGYVRGS+GL FVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSSPRGDEVLCLLRELDRKMNDRGYVRGSRGLAFVDIEEEAEEEKVWLHSERLA 540
Query: 541 LGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCN 600
LGFGLISI KGL IRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFK+GCCTCN
Sbjct: 541 LGFGLISIPKGLIIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKNGCCTCN 600
Query: 601 DFW 604
FW
Sbjct: 601 GFW 603
BLAST of HG10010338 vs. NCBI nr
Match:
XP_004143199.1 (pentatricopeptide repeat-containing protein At4g15720 [Cucumis sativus] >KGN47194.1 hypothetical protein Csa_021072 [Cucumis sativus])
HSP 1 Score: 1114.8 bits (2882), Expect = 0.0e+00
Identity = 547/603 (90.71%), Postives = 576/603 (95.52%), Query Frame = 0
Query: 1 MLKRNLHFALTRPCLSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTV 60
MLKRNL+FALTRP LSRENER QTI+NLSRHLRNCNDL+SSISTHSIALKLGFLN+TV
Sbjct: 1 MLKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTV 60
Query: 61 AVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSS 120
VNHLINCYVRFR++ATAH+LFDEMPNPNVVSWTSLMAGY+DNG+P+TAL LF M RS
Sbjct: 61 NVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSP 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLRHGE FHA+VEIFGYGGNIVVCSSLI MYGKCNDVVKAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKAR 180
Query: 181 SVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASL 240
VFNSMSCKNIVSW SMIAAYAQNAHGD+ALKVFREF+SLSSEHPNPYMLASVISACASL
Sbjct: 181 GVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASL 240
Query: 241 GRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSII 300
GRLVSGKV+HGAAI LGCDSS+VVASVLVDMYAKCGSL+YSDKVFNRISNPSVIPYTS+I
Sbjct: 241 GRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGI 360
VSTAKYGFGRKSLQLFEEMVRKGLKPNHIT VGVLHACSHSGLPNEGL YLTSMYE+YGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKA 420
MPETKHYTCVVDMLAR G+LDKA+ LAKSM+VA DDKALLWGALLSASRCHGRVDIAA+A
Sbjct: 361 MPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYV 480
CQQLVNSNRQVAGAYVTLSN YASAGDMEKAH+LRVEMK TGV KEPGCSWIEIKDSSY+
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYI 480
Query: 481 FYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLA 540
FYAG+ITSCPRGDEVL LLRELD+KMK+RGYVRG KGLVFVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
Query: 541 LGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCN 600
LGFGLISI KGLTIRIMKNLRMCSDCHEAFKLISEI+EREFVVRDINRFHHFK+GCCTCN
Sbjct: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCN 600
Query: 601 DFW 604
FW
Sbjct: 601 GFW 603
BLAST of HG10010338 vs. NCBI nr
Match:
XP_008458473.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g15720 [Cucumis melo])
HSP 1 Score: 1110.9 bits (2872), Expect = 0.0e+00
Identity = 546/603 (90.55%), Postives = 577/603 (95.69%), Query Frame = 0
Query: 1 MLKRNLHFALTRPCLSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTV 60
MLKRNLHFALTRP LSRENER QTI+NLS HLRNCNDL+SSI THSIALKLGFLN+TV
Sbjct: 1 MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
Query: 61 AVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSS 120
VNHLINCYVRFR++ATAHRLFDEMPNPNVVSWTSLMAGY+DNG+P+TALLLF M RS
Sbjct: 61 TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLR+GE+FHA+VEIFGYG NIVVCSSLI MYGKCNDVVKAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
Query: 181 SVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASL 240
SVFNSMSCKNIVSW SMIAAYAQNAHGD+ALKVFREF+SLSSE PNPYMLASVISACASL
Sbjct: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
Query: 241 GRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSII 300
GRLVSGKVVHGAAI LGCDSS+VVASVLVDMYAKCGSL+YSD VFNRISNPSVIPYTS+I
Sbjct: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGI 360
VSTAKYGFGRKSLQLFEEMVRKGLKPNHIT +GVLHACSHSGLPNEGL YLTSMYE+YGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKA 420
MPETKHYTCVVDMLAR+G+LDKA+ +AKSM+VA DDKALLWGALLSASRCHGRVDIAA+A
Sbjct: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYV 480
CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAH+LRVEMKHTGV KEPGCSWIEIKDSSY+
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480
Query: 481 FYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLA 540
FYAG+ITSCPRGDEVL LLRELD+KMK+RGYVRG KGLVFVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
Query: 541 LGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCN 600
LGFGLISI KGLTIRIMKNLRMCSDCHEAFKLISEI+EREFVVRDINRFHHF+SGCCTCN
Sbjct: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600
Query: 601 DFW 604
FW
Sbjct: 601 GFW 603
BLAST of HG10010338 vs. NCBI nr
Match:
XP_022138437.1 (pentatricopeptide repeat-containing protein At4g15720 [Momordica charantia])
HSP 1 Score: 1020.8 bits (2638), Expect = 4.9e-294
Identity = 502/603 (83.25%), Postives = 545/603 (90.38%), Query Frame = 0
Query: 1 MLKRNLHFALTRPCLSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTV 60
MLK N+HFALTRP LSRENERLSFQTI N SRHLRNCNDL+S+ S H IALKLGFL T+
Sbjct: 1 MLKPNIHFALTRPRLSRENERLSFQTIANFSRHLRNCNDLISATSAHPIALKLGFLTQTL 60
Query: 61 AVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSS 120
VNHLINCYVR R V+ AH LFDEMP PNVVSWTSLMAGYID +P+TAL LF MSRS
Sbjct: 61 PVNHLINCYVRLRRVSIAHHLFDEMPTPNVVSWTSLMAGYIDACQPSTALSLFGEMSRSP 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLR G+KFHAYVEI GYGGN+VVCSSLI MYGKCNDVV+AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLREGKKFHAYVEISGYGGNVVVCSSLIDMYGKCNDVVRAR 180
Query: 181 SVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASL 240
VF+SM+CKNIVSW SMIA YAQNAHGDDALK+FREFSSL+ EHPN +MLAS ISACASL
Sbjct: 181 RVFDSMACKNIVSWTSMIATYAQNAHGDDALKLFREFSSLNYEHPNHFMLASAISACASL 240
Query: 241 GRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSII 300
GRLV G+VVHGA IRLG DS+DV++SVLVDMYAKCGSL SDKVF+RI NPSVIPYTS+I
Sbjct: 241 GRLVLGRVVHGAVIRLGHDSNDVISSVLVDMYAKCGSLNCSDKVFSRILNPSVIPYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGI 360
VS AKYG GR+SLQLFEEMVRKGLKPNH+TFVGVL+ACSHSGL +EGL YLTSMYER+GI
Sbjct: 301 VSRAKYGLGRQSLQLFEEMVRKGLKPNHVTFVGVLYACSHSGLLDEGLSYLTSMYERHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKA 420
MPE+KHYTCVVDMLAR GQLD+AYQLAKSMEV DD+ALLWGALLSASR HGRVDIA +A
Sbjct: 361 MPESKHYTCVVDMLARVGQLDRAYQLAKSMEVEPDDEALLWGALLSASRYHGRVDIAVEA 420
Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYV 480
CQ+LVNSN+QVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTG+ KEPGCSW+EIK+ +YV
Sbjct: 421 CQRLVNSNQQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGINKEPGCSWLEIKNLTYV 480
Query: 481 FYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLA 540
FYAGD+ SCP EVL LLREL+RKMK+RGY RGSKGLVFVD+EEEAEEE V LHSERLA
Sbjct: 481 FYAGDVESCPHSKEVLCLLRELERKMKDRGYGRGSKGLVFVDVEEEAEEEAVGLHSERLA 540
Query: 541 LGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCN 600
LGFGLISI KG+TIRIMKNLRMCSDCHEAFKLISEIVER+FVVRD+NRFHHF GCCTCN
Sbjct: 541 LGFGLISIPKGITIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFTGGCCTCN 600
Query: 601 DFW 604
DFW
Sbjct: 601 DFW 603
BLAST of HG10010338 vs. NCBI nr
Match:
KAG7026300.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1015.0 bits (2623), Expect = 2.7e-292
Identity = 505/604 (83.61%), Postives = 548/604 (90.73%), Query Frame = 0
Query: 1 MLKRNLHFALTRPCLSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTV 60
MLKR+L FAL NER QTI+NLS HLR+C DL+SS S HSIALKLGFLN T+
Sbjct: 1 MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLISSTSIHSIALKLGFLNQTL 60
Query: 61 AVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSS 120
NHLINCYVRFR VA AH+LFDEMP NVVSWTSLMAGY+D+G+P+ AL LF AMSR+S
Sbjct: 61 TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVDDGQPSIALSLFGAMSRTS 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLR GEKFHA +EIFGYGGN+VVCSSLI MYGKCNDV++AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNDVIRAR 180
Query: 181 SVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASL 240
VF+SMSCKNIVSW SMIAAYAQNAHGDDALK+FREF S S E PN +MLASVISACA L
Sbjct: 181 RVFDSMSCKNIVSWTSMIAAYAQNAHGDDALKLFREFGSSSWERPNHFMLASVISACACL 240
Query: 241 GRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSII 300
GRLVSGKVVH AAIRLGCDS+DVVASVLVDMYAKCGSLEYSD+VF RI NP VI YTS+I
Sbjct: 241 GRLVSGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGI 360
VSTAKYG GR+SL+LFEEMVRKGLKPNH+TFVGVLHACSHSGLP+EGL YLTSMYE++GI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSME-VASDDKALLWGALLSASRCHGRVDIAAK 420
MPETKHYTCVVDMLARAG+LDKAYQLAKSM+ + DD+ALLWGALLS SR HGRVDIAA+
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420
Query: 421 ACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSY 480
ACQ+LV++NRQVAGAYVTLSNAYASAGDMEKA RLRVEMKH+GV KEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480
Query: 481 VFYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERL 540
VFYAGD+ SCPRGDEVLRLLREL+RKMK+RGY RGSKGLVFVDIEEEAEEEKVWLHSERL
Sbjct: 481 VFYAGDVMSCPRGDEVLRLLRELERKMKDRGYSRGSKGLVFVDIEEEAEEEKVWLHSERL 540
Query: 541 ALGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTC 600
ALGF LISI +GLTIRIMKNLRMCSDCHEAFKLISEIVER+FVVRDINRFHHFK+G CTC
Sbjct: 541 ALGFCLISIPEGLTIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDINRFHHFKTGYCTC 596
Query: 601 NDFW 604
NDFW
Sbjct: 601 NDFW 596
BLAST of HG10010338 vs. ExPASy Swiss-Prot
Match:
Q8VYH0 (Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H1 PE=2 SV=1)
HSP 1 Score: 646.4 bits (1666), Expect = 3.3e-184
Identity = 325/567 (57.32%), Postives = 426/567 (75.13%), Query Frame = 0
Query: 47 HSIALKLGFLNHTVAVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRP 106
H++ LKLGF + T VNHL+ YV+ + + TA +LFDEM PNVVSWTS+++GY D G+P
Sbjct: 52 HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKP 111
Query: 107 NTALLLFRAMSRS-SVVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSS 166
AL +F+ M V PN++TFA+ KACS L+ R G+ HA +EI G NIVV SS
Sbjct: 112 QNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSS 171
Query: 167 LIAMYGKCNDVVKARSVFNSM--SCKNIVSWNSMIAAYAQNAHGDDALKVFREF-SSLSS 226
L+ MYGKCNDV AR VF+SM +N+VSW SMI AYAQNA G +A+++FR F ++L+S
Sbjct: 172 LVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTS 231
Query: 227 EHPNPYMLASVISACASLGRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSD 286
+ N +MLASVISAC+SLGRL GKV HG R G +S+ VVA+ L+DMYAKCGSL ++
Sbjct: 232 DRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAE 291
Query: 287 KVFNRISNPSVIPYTSIIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSG 346
K+F RI SVI YTS+I++ AK+G G +++LF+EMV + PN++T +GVLHACSHSG
Sbjct: 292 KIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSG 351
Query: 347 LPNEGLDYLTSMYERYGIMPETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWG 406
L NEGL+YL+ M E+YG++P+++HYTCVVDML R G++D+AY+LAK++EV ++ ALLWG
Sbjct: 352 LVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWG 411
Query: 407 ALLSASRCHGRVDIAAKACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTG 466
ALLSA R HGRV+I ++A ++L+ SN+QV AY+ LSNAYA +G E + LR+EMK +G
Sbjct: 412 ALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSG 471
Query: 467 VQKEPGCSWIEIKDSSYVFYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGL---- 526
KE CSWIE KDS YVF+AGD+ SC E+ R L++L+++MKERG+ RGS +
Sbjct: 472 NVKERACSWIENKDSVYVFHAGDL-SCDESGEIERFLKDLEKRMKERGH-RGSSSMITTS 531
Query: 527 --VFVDIEEEAEEEKVWLHSERLALGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEI 586
VFVD++EEA++E V LH ERLAL +GL+ + G TIRIM NLRMC DCHEAFKLISEI
Sbjct: 532 SSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEI 591
Query: 587 VEREFVVRDINRFHHFKSGCCTCNDFW 604
VERE VVRD+NRFH FK+G CTC D+W
Sbjct: 592 VEREIVVRDVNRFHCFKNGSCTCRDYW 616
BLAST of HG10010338 vs. ExPASy Swiss-Prot
Match:
Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)
HSP 1 Score: 412.1 bits (1058), Expect = 1.0e-113
Identity = 208/536 (38.81%), Postives = 333/536 (62.13%), Query Frame = 0
Query: 68 CYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSSVVPNDFT 127
C + F + + R+F+ MP +VVS+ +++AGY +G AL + R M + + P+ FT
Sbjct: 186 CIMPF-GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 245
Query: 128 FATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKARSVFNSMS 187
++ + S ++ G++ H YV G ++ + SSL+ MY K + + VF+ +
Sbjct: 246 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 305
Query: 188 CKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASLGRLVSGK 247
C++ +SWNS++A Y QN ++AL++FR+ + + P +SVI ACA L L GK
Sbjct: 306 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGK 365
Query: 248 VVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSIIVSTAKYG 307
+HG +R G S+ +AS LVDMY+KCG+++ + K+F+R++ + +T+II+ A +G
Sbjct: 366 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 425
Query: 308 FGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGIMPETKHY 367
G +++ LFEEM R+G+KPN + FV VL ACSH GL +E Y SM + YG+ E +HY
Sbjct: 426 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY 485
Query: 368 TCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKACQQLVNS 427
V D+L RAG+L++AY M V + +W LLS+ H +++A K +++
Sbjct: 486 AAVADLLGRAGKLEEAYNFISKMCV--EPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 545
Query: 428 NRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYVFYAGDIT 487
+ + GAYV + N YAS G ++ +LR+ M+ G++K+P CSWIE+K+ ++ F +GD
Sbjct: 546 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD-R 605
Query: 488 SCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLALGFGLIS 547
S P D++ L+ + +M++ GYV + G V D++EE + E ++ HSERLA+ FG+I+
Sbjct: 606 SHPSMDKINEFLKAVMEQMEKEGYVADTSG-VLHDVDEEHKRELLFGHSERLAVAFGIIN 665
Query: 548 ISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCNDFW 604
G TIR+ KN+R+C+DCH A K IS+I ERE +VRD +RFHHF G C+C D+W
Sbjct: 666 TEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
BLAST of HG10010338 vs. ExPASy Swiss-Prot
Match:
O23266 (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H13 PE=1 SV=3)
HSP 1 Score: 409.1 bits (1050), Expect = 8.9e-113
Identity = 219/598 (36.62%), Postives = 354/598 (59.20%), Query Frame = 0
Query: 40 LVSSISTHSIALKLGFLNHTVAVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAG 99
L ++ + H+ +KLG + N L+N Y + + A ++FDEMP+ + ++W S++
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 100 YIDNGRPNTALLLFRAM-SRSSVVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGG 159
L +F ++ S S + P+DF F+ +KAC+ L ++ HG + H + + Y
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 160 NIVVCSSLIAMYGKCNDVVKARSVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFR--- 219
+ VV SSL+ MY KC + A++VF+S+ KN +SW +M++ YA++ ++AL++FR
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 220 -------------------------EFSSLSSEHP---NPYMLASVISACASLGRLVSGK 279
F+ + E +P +L+S++ ACA+L ++G+
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 280 VVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSIIVSTAKYG 339
VHG I LG DS +++ L+DMYAKC + + +F+R+ + V+ +TS+IV A++G
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 340 FGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGIMPETKHY 399
K+L L+++MV G+KPN +TFVG+++ACSH G +G + SM + YGI P +HY
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 400 TCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKACQQLVNS 459
TC++D+L R+G LD+A L +M D+ W ALLSA + GR + + LV+S
Sbjct: 379 TCLLDLLGRSGLLDEAENLIHTMPFPPDEPT--WAALLSACKRQGRGQMGIRIADHLVSS 438
Query: 460 NR-QVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYVFYAGDI 519
+ + Y+ LSN YASA K R ++ V+K+PG S +E++ + VFYAG+
Sbjct: 439 FKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGE- 498
Query: 520 TSCPRGDEVLRLLRELDRKMKER-GYVRGSKGLVFVDIEEEAEEEKVWLHSERLALGFGL 579
TS P +++ RLL++L+ +M+ R GYV + ++ D++E+ +E+ ++ HSER A+ +GL
Sbjct: 499 TSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILH-DMDEQEKEKLLFWHSERSAVAYGL 558
Query: 580 ISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCNDFW 604
+ G IRI+KNLR+C DCH K ISEI ERE +VRD R+HHFK G C+CNDFW
Sbjct: 559 LKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
BLAST of HG10010338 vs. ExPASy Swiss-Prot
Match:
O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)
HSP 1 Score: 408.7 bits (1049), Expect = 1.2e-112
Identity = 209/542 (38.56%), Postives = 326/542 (60.15%), Query Frame = 0
Query: 63 NHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSR-SSV 122
N ++N Y + A +LFDEM + SWT+++ GY+ +P AL+L+ M R +
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 123 VPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKARS 182
PN FT + A+ A + + +R G++ H ++ G + V+ SSL+ MYGKC + +AR+
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 183 VFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASLG 242
+F+ + K++VSW SMI Y +++ + +F E S E PN Y A V++ACA L
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLT 334
Query: 243 RLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSIIV 302
GK VHG R+G D +S LVDMY KCG++E + V + P ++ +TS+I
Sbjct: 335 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 394
Query: 303 STAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGIM 362
A+ G ++L+ F+ +++ G KP+H+TFV VL AC+H+GL +GL++ S+ E++ +
Sbjct: 395 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 454
Query: 363 PETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKAC 422
+ HYTC+VD+LAR+G+ ++ + M + LW ++L +G +D+A +A
Sbjct: 455 HTSDHYTCLVDLLARSGRFEQLKSVISEMPM--KPSKFLWASVLGGCSTYGNIDLAEEAA 514
Query: 423 QQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYVF 482
Q+L + YVT++N YA+AG E+ ++R M+ GV K PG SW EIK +VF
Sbjct: 515 QELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVF 574
Query: 483 YAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLAL 542
A D TS P ++++ LREL +KMKE GYV + LV D+E+E +EE + HSE+LA+
Sbjct: 575 IAAD-TSHPMYNQIVEFLRELRKKMKEEGYVPAT-SLVLHDVEDEQKEENLVYHSEKLAV 634
Query: 543 GFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCND 602
F ++S +G I++ KNLR C DCH A K IS I +R+ VRD RFH F++G C+C D
Sbjct: 635 AFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGD 691
Query: 603 FW 604
+W
Sbjct: 695 YW 691
BLAST of HG10010338 vs. ExPASy Swiss-Prot
Match:
Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)
HSP 1 Score: 404.4 bits (1038), Expect = 2.2e-111
Identity = 223/594 (37.54%), Postives = 342/594 (57.58%), Query Frame = 0
Query: 15 LSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTVAVNHLINCYVRFRN 74
LS+E+ S QT + L + + L ++ H L G LI Y +
Sbjct: 69 LSQESSP-SQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS 128
Query: 75 VATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSSVVPNDFTFATAIKA 134
V A ++FD+ + W +L G L L+ M+R V + FT+ +KA
Sbjct: 129 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 188
Query: 135 C----SILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKARSVFNSMSCKN 194
C +++L G++ HA++ GY ++ + ++L+ MY + V A VF M +N
Sbjct: 189 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 248
Query: 195 IVSWNSMIAAYAQNAHGDDALKVFRE-FSSLSSEHPNPYMLASVISACASLGRLVSGKVV 254
+VSW++MIA YA+N +AL+ FRE PN + SV+ ACASL L GK++
Sbjct: 249 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 308
Query: 255 HGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSIIVSTAKYGFG 314
HG +R G DS V S LV MY +CG LE +VF+R+ + V+ + S+I S +G+G
Sbjct: 309 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 368
Query: 315 RKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGIMPETKHYTC 374
+K++Q+FEEM+ G P +TFV VL ACSH GL EG +M+ +GI P+ +HY C
Sbjct: 369 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 428
Query: 375 VVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKACQQLVNSNR 434
+VD+L RA +LD+A ++ + M K +WG+LL + R HG V++A +A ++L
Sbjct: 429 MVDLLGRANRLDEAAKMVQDMRTEPGPK--VWGSLLGSCRIHGNVELAERASRRLFALEP 488
Query: 435 QVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYVFYAGDITSC 494
+ AG YV L++ YA A ++ R++ ++H G+QK PG W+E++ Y F + D +
Sbjct: 489 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN- 548
Query: 495 PRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLALGFGLISIS 554
P +++ L +L MKE+GY+ +KG+++ ++E E +E V HSE+LAL FGLI+ S
Sbjct: 549 PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLY-ELETEEKERIVLGHSEKLALAFGLINTS 608
Query: 555 KGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCNDFW 604
KG IRI KNLR+C DCH K IS+ +E+E +VRD+NRFH FK+G C+C D+W
Sbjct: 609 KGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
BLAST of HG10010338 vs. ExPASy TrEMBL
Match:
A0A0A0KEC7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G197240 PE=3 SV=1)
HSP 1 Score: 1114.8 bits (2882), Expect = 0.0e+00
Identity = 547/603 (90.71%), Postives = 576/603 (95.52%), Query Frame = 0
Query: 1 MLKRNLHFALTRPCLSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTV 60
MLKRNL+FALTRP LSRENER QTI+NLSRHLRNCNDL+SSISTHSIALKLGFLN+TV
Sbjct: 1 MLKRNLYFALTRPYLSRENERPFLQTIENLSRHLRNCNDLISSISTHSIALKLGFLNNTV 60
Query: 61 AVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSS 120
VNHLINCYVRFR++ATAH+LFDEMPNPNVVSWTSLMAGY+DNG+P+TAL LF M RS
Sbjct: 61 NVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFLFGEMLRSP 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLRHGE FHA+VEIFGYGGNIVVCSSLI MYGKCNDVVKAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGKCNDVVKAR 180
Query: 181 SVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASL 240
VFNSMSCKNIVSW SMIAAYAQNAHGD+ALKVFREF+SLSSEHPNPYMLASVISACASL
Sbjct: 181 GVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLASVISACASL 240
Query: 241 GRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSII 300
GRLVSGKV+HGAAI LGCDSS+VVASVLVDMYAKCGSL+YSDKVFNRISNPSVIPYTS+I
Sbjct: 241 GRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPSVIPYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGI 360
VSTAKYGFGRKSLQLFEEMVRKGLKPNHIT VGVLHACSHSGLPNEGL YLTSMYE+YGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKA 420
MPETKHYTCVVDMLAR G+LDKA+ LAKSM+VA DDKALLWGALLSASRCHGRVDIAA+A
Sbjct: 361 MPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYV 480
CQQLVNSNRQVAGAYVTLSN YASAGDMEKAH+LRVEMK TGV KEPGCSWIEIKDSSY+
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWIEIKDSSYI 480
Query: 481 FYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLA 540
FYAG+ITSCPRGDEVL LLRELD+KMK+RGYVRG KGLVFVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
Query: 541 LGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCN 600
LGFGLISI KGLTIRIMKNLRMCSDCHEAFKLISEI+EREFVVRDINRFHHFK+GCCTCN
Sbjct: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFKNGCCTCN 600
Query: 601 DFW 604
FW
Sbjct: 601 GFW 603
BLAST of HG10010338 vs. ExPASy TrEMBL
Match:
A0A1S3C8I5 (pentatricopeptide repeat-containing protein At4g15720 OS=Cucumis melo OX=3656 GN=LOC103497869 PE=3 SV=1)
HSP 1 Score: 1110.9 bits (2872), Expect = 0.0e+00
Identity = 546/603 (90.55%), Postives = 577/603 (95.69%), Query Frame = 0
Query: 1 MLKRNLHFALTRPCLSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTV 60
MLKRNLHFALTRP LSRENER QTI+NLS HLRNCNDL+SSI THSIALKLGFLN+TV
Sbjct: 1 MLKRNLHFALTRPYLSRENERPFLQTIENLSLHLRNCNDLISSIFTHSIALKLGFLNNTV 60
Query: 61 AVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSS 120
VNHLINCYVRFR++ATAHRLFDEMPNPNVVSWTSLMAGY+DNG+P+TALLLF M RS
Sbjct: 61 TVNHLINCYVRFRSIATAHRLFDEMPNPNVVSWTSLMAGYVDNGQPSTALLLFGEMLRSP 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLR+GE+FHA+VEIFGYG NIVVCSSLI MYGKCNDVVKAR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRYGERFHAHVEIFGYGCNIVVCSSLIDMYGKCNDVVKAR 180
Query: 181 SVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASL 240
SVFNSMSCKNIVSW SMIAAYAQNAHGD+ALKVFREF+SLSSE PNPYMLASVISACASL
Sbjct: 181 SVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSERPNPYMLASVISACASL 240
Query: 241 GRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSII 300
GRLVSGKVVHGAAI LGCDSS+VVASVLVDMYAKCGSL+YSD VFNRISNPSVIPYTS+I
Sbjct: 241 GRLVSGKVVHGAAICLGCDSSEVVASVLVDMYAKCGSLDYSDNVFNRISNPSVIPYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGI 360
VSTAKYGFGRKSLQLFEEMVRKGLKPNHIT +GVLHACSHSGLPNEGL YLTSMYE+YGI
Sbjct: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITLLGVLHACSHSGLPNEGLYYLTSMYEKYGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKA 420
MPETKHYTCVVDMLAR+G+LDKA+ +AKSM+VA DDKALLWGALLSASRCHGRVDIAA+A
Sbjct: 361 MPETKHYTCVVDMLARSGELDKAFDIAKSMDVAPDDKALLWGALLSASRCHGRVDIAAEA 420
Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYV 480
CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAH+LRVEMKHTGV KEPGCSWIEIKDSSY+
Sbjct: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHKLRVEMKHTGVHKEPGCSWIEIKDSSYI 480
Query: 481 FYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLA 540
FYAG+ITSCPRGDEVL LLRELD+KMK+RGYVRG KGLVFVDIEEEAEEEKVWLHSERLA
Sbjct: 481 FYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKVWLHSERLA 540
Query: 541 LGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCN 600
LGFGLISI KGLTIRIMKNLRMCSDCHEAFKLISEI+EREFVVRDINRFHHF+SGCCTCN
Sbjct: 541 LGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHFQSGCCTCN 600
Query: 601 DFW 604
FW
Sbjct: 601 GFW 603
BLAST of HG10010338 vs. ExPASy TrEMBL
Match:
A0A6J1CB36 (pentatricopeptide repeat-containing protein At4g15720 OS=Momordica charantia OX=3673 GN=LOC111009611 PE=3 SV=1)
HSP 1 Score: 1020.8 bits (2638), Expect = 2.4e-294
Identity = 502/603 (83.25%), Postives = 545/603 (90.38%), Query Frame = 0
Query: 1 MLKRNLHFALTRPCLSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTV 60
MLK N+HFALTRP LSRENERLSFQTI N SRHLRNCNDL+S+ S H IALKLGFL T+
Sbjct: 1 MLKPNIHFALTRPRLSRENERLSFQTIANFSRHLRNCNDLISATSAHPIALKLGFLTQTL 60
Query: 61 AVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSS 120
VNHLINCYVR R V+ AH LFDEMP PNVVSWTSLMAGYID +P+TAL LF MSRS
Sbjct: 61 PVNHLINCYVRLRRVSIAHHLFDEMPTPNVVSWTSLMAGYIDACQPSTALSLFGEMSRSP 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLR G+KFHAYVEI GYGGN+VVCSSLI MYGKCNDVV+AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLREGKKFHAYVEISGYGGNVVVCSSLIDMYGKCNDVVRAR 180
Query: 181 SVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASL 240
VF+SM+CKNIVSW SMIA YAQNAHGDDALK+FREFSSL+ EHPN +MLAS ISACASL
Sbjct: 181 RVFDSMACKNIVSWTSMIATYAQNAHGDDALKLFREFSSLNYEHPNHFMLASAISACASL 240
Query: 241 GRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSII 300
GRLV G+VVHGA IRLG DS+DV++SVLVDMYAKCGSL SDKVF+RI NPSVIPYTS+I
Sbjct: 241 GRLVLGRVVHGAVIRLGHDSNDVISSVLVDMYAKCGSLNCSDKVFSRILNPSVIPYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGI 360
VS AKYG GR+SLQLFEEMVRKGLKPNH+TFVGVL+ACSHSGL +EGL YLTSMYER+GI
Sbjct: 301 VSRAKYGLGRQSLQLFEEMVRKGLKPNHVTFVGVLYACSHSGLLDEGLSYLTSMYERHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKA 420
MPE+KHYTCVVDMLAR GQLD+AYQLAKSMEV DD+ALLWGALLSASR HGRVDIA +A
Sbjct: 361 MPESKHYTCVVDMLARVGQLDRAYQLAKSMEVEPDDEALLWGALLSASRYHGRVDIAVEA 420
Query: 421 CQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYV 480
CQ+LVNSN+QVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTG+ KEPGCSW+EIK+ +YV
Sbjct: 421 CQRLVNSNQQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGINKEPGCSWLEIKNLTYV 480
Query: 481 FYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLA 540
FYAGD+ SCP EVL LLREL+RKMK+RGY RGSKGLVFVD+EEEAEEE V LHSERLA
Sbjct: 481 FYAGDVESCPHSKEVLCLLRELERKMKDRGYGRGSKGLVFVDVEEEAEEEAVGLHSERLA 540
Query: 541 LGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCN 600
LGFGLISI KG+TIRIMKNLRMCSDCHEAFKLISEIVER+FVVRD+NRFHHF GCCTCN
Sbjct: 541 LGFGLISIPKGITIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFTGGCCTCN 600
Query: 601 DFW 604
DFW
Sbjct: 601 DFW 603
BLAST of HG10010338 vs. ExPASy TrEMBL
Match:
A0A6J1ER03 (pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita moschata OX=3662 GN=LOC111436901 PE=3 SV=1)
HSP 1 Score: 1014.2 bits (2621), Expect = 2.2e-292
Identity = 503/604 (83.28%), Postives = 548/604 (90.73%), Query Frame = 0
Query: 1 MLKRNLHFALTRPCLSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTV 60
MLKR+L FAL NER QTI+NLS HLR+C DL+SS S HSIALKLGFLN T+
Sbjct: 1 MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLISSTSIHSIALKLGFLNQTL 60
Query: 61 AVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSS 120
NHLINCYVRFR VA AH+LFDEMP NVVSWTSLMAGY+DNG+P+ AL LF AMSR+S
Sbjct: 61 TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVDNGQPSIALSLFGAMSRTS 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLR GEKFHA +EIFGYGGN+VVCSSLI MYGKCNDV++AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNDVIRAR 180
Query: 181 SVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASL 240
VF+SMSCKNIVSW SMIAAYAQNAHGDDALK+FREF S S E PN +MLASVISACA L
Sbjct: 181 RVFDSMSCKNIVSWTSMIAAYAQNAHGDDALKLFREFGSSSWERPNHFMLASVISACACL 240
Query: 241 GRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSII 300
GRLV+GKVVH AAIRLGCDS+DVVASVLVDMYAKCGSLEYSD+VF RI NP VI YTS+I
Sbjct: 241 GRLVAGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGI 360
VSTAKYG GR+SL+LFEEMVRKGLKPNH+TFVGVLHACSHSGLP+EGL YLTSMYE++GI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSME-VASDDKALLWGALLSASRCHGRVDIAAK 420
MPETKHYTCVVDMLARAG+LDKAYQLAKSM+ + DD+ALLWGALLS SR HGRVDIAA+
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420
Query: 421 ACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSY 480
ACQ+LV++NRQVAGAYVTLSNAYASAGDMEKA RLRVEMKH+GV KEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480
Query: 481 VFYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERL 540
VFYAGD+ SCPRGDEVLRLLREL+RKMK+RGY RGSKGLVFVDIEEEAEEEKVWLHSERL
Sbjct: 481 VFYAGDVMSCPRGDEVLRLLRELERKMKDRGYSRGSKGLVFVDIEEEAEEEKVWLHSERL 540
Query: 541 ALGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTC 600
ALGF LISI +GLTIR+MKNLRMCSDCHEAFKLISEIVER+FVVRD+NRFHHFK+G CTC
Sbjct: 541 ALGFCLISIPEGLTIRMMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFKTGYCTC 596
Query: 601 NDFW 604
NDFW
Sbjct: 601 NDFW 596
BLAST of HG10010338 vs. ExPASy TrEMBL
Match:
A0A6J1KGB2 (pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita maxima OX=3661 GN=LOC111494855 PE=3 SV=1)
HSP 1 Score: 1005.4 bits (2598), Expect = 1.0e-289
Identity = 500/604 (82.78%), Postives = 545/604 (90.23%), Query Frame = 0
Query: 1 MLKRNLHFALTRPCLSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTV 60
MLKR+L FAL NER QTI+NLS HLR+C DLVSS S HSIALKLGFLN T+
Sbjct: 1 MLKRSLPFAL--------NERPPLQTIENLSHHLRSCKDLVSSTSIHSIALKLGFLNQTI 60
Query: 61 AVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSS 120
NHLINCYVRFR VA AH+LFDEMP NVVSWTSLMAGY+++G+P AL LF AMSR+S
Sbjct: 61 TANHLINCYVRFRRVAIAHQLFDEMPTRNVVSWTSLMAGYVNDGQPCIALSLFGAMSRTS 120
Query: 121 VVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKAR 180
VVPNDFTFATAIKACSILSNLR GEKFHA +EIFGYGGN+VVCSSLI MYGKCN+V++AR
Sbjct: 121 VVPNDFTFATAIKACSILSNLRDGEKFHACMEIFGYGGNVVVCSSLIDMYGKCNNVIRAR 180
Query: 181 SVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASL 240
VF+SMSCKNI+SW SMIAAYAQNAH DDALK+FREF S S EHPN +MLASVISACA L
Sbjct: 181 RVFDSMSCKNIISWTSMIAAYAQNAHSDDALKLFREFGSSSWEHPNHFMLASVISACACL 240
Query: 241 GRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSII 300
GRLVSGKVVH AAIRLGCDS+DVVASVLVDMYAKCGSLEYSD+VF RI NP VI YTS+I
Sbjct: 241 GRLVSGKVVHSAAIRLGCDSNDVVASVLVDMYAKCGSLEYSDRVFKRILNPCVISYTSMI 300
Query: 301 VSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGI 360
VSTAKYG GR+SL+LFEEMVRKGLKPNH+TFVGVLHACSHSGLP+EGL YLTSMYE++GI
Sbjct: 301 VSTAKYGLGRQSLELFEEMVRKGLKPNHVTFVGVLHACSHSGLPDEGLHYLTSMYEKHGI 360
Query: 361 MPETKHYTCVVDMLARAGQLDKAYQLAKSME-VASDDKALLWGALLSASRCHGRVDIAAK 420
MPETKHYTCVVDMLARAG+LDKAYQLAKSM+ + DD+ALLWGALLS SR HGRVDIAA+
Sbjct: 361 MPETKHYTCVVDMLARAGELDKAYQLAKSMKAMPDDDQALLWGALLSTSRLHGRVDIAAE 420
Query: 421 ACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSY 480
ACQ+LV++NRQVAGAYVTLSNAYASAGDMEKA RLRVEMKH+GV KEPGCSW+EIKDSSY
Sbjct: 421 ACQRLVDANRQVAGAYVTLSNAYASAGDMEKAQRLRVEMKHSGVYKEPGCSWVEIKDSSY 480
Query: 481 VFYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERL 540
VFYAGD+ SCPRG+EVL LLREL+RKMK RGY RGSKGLVFVDIEEEAEEEKVWLHSERL
Sbjct: 481 VFYAGDVMSCPRGNEVLHLLRELERKMKGRGYSRGSKGLVFVDIEEEAEEEKVWLHSERL 540
Query: 541 ALGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTC 600
ALGF LISI +GLTIRIMKNLRMCSDCHEAFKLISEIVER+FVVRD+NRFHHFK+G CTC
Sbjct: 541 ALGFCLISIPEGLTIRIMKNLRMCSDCHEAFKLISEIVERDFVVRDVNRFHHFKTGYCTC 596
Query: 601 NDFW 604
NDFW
Sbjct: 601 NDFW 596
BLAST of HG10010338 vs. TAIR 10
Match:
AT4G15720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 646.4 bits (1666), Expect = 2.3e-185
Identity = 325/567 (57.32%), Postives = 426/567 (75.13%), Query Frame = 0
Query: 47 HSIALKLGFLNHTVAVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRP 106
H++ LKLGF + T VNHL+ YV+ + + TA +LFDEM PNVVSWTS+++GY D G+P
Sbjct: 52 HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKP 111
Query: 107 NTALLLFRAMSRS-SVVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSS 166
AL +F+ M V PN++TFA+ KACS L+ R G+ HA +EI G NIVV SS
Sbjct: 112 QNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSS 171
Query: 167 LIAMYGKCNDVVKARSVFNSM--SCKNIVSWNSMIAAYAQNAHGDDALKVFREF-SSLSS 226
L+ MYGKCNDV AR VF+SM +N+VSW SMI AYAQNA G +A+++FR F ++L+S
Sbjct: 172 LVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTS 231
Query: 227 EHPNPYMLASVISACASLGRLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSD 286
+ N +MLASVISAC+SLGRL GKV HG R G +S+ VVA+ L+DMYAKCGSL ++
Sbjct: 232 DRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAE 291
Query: 287 KVFNRISNPSVIPYTSIIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSG 346
K+F RI SVI YTS+I++ AK+G G +++LF+EMV + PN++T +GVLHACSHSG
Sbjct: 292 KIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSG 351
Query: 347 LPNEGLDYLTSMYERYGIMPETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWG 406
L NEGL+YL+ M E+YG++P+++HYTCVVDML R G++D+AY+LAK++EV ++ ALLWG
Sbjct: 352 LVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWG 411
Query: 407 ALLSASRCHGRVDIAAKACQQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTG 466
ALLSA R HGRV+I ++A ++L+ SN+QV AY+ LSNAYA +G E + LR+EMK +G
Sbjct: 412 ALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSG 471
Query: 467 VQKEPGCSWIEIKDSSYVFYAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGL---- 526
KE CSWIE KDS YVF+AGD+ SC E+ R L++L+++MKERG+ RGS +
Sbjct: 472 NVKERACSWIENKDSVYVFHAGDL-SCDESGEIERFLKDLEKRMKERGH-RGSSSMITTS 531
Query: 527 --VFVDIEEEAEEEKVWLHSERLALGFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEI 586
VFVD++EEA++E V LH ERLAL +GL+ + G TIRIM NLRMC DCHEAFKLISEI
Sbjct: 532 SSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEI 591
Query: 587 VEREFVVRDINRFHHFKSGCCTCNDFW 604
VERE VVRD+NRFH FK+G CTC D+W
Sbjct: 592 VEREIVVRDVNRFHCFKNGSCTCRDYW 616
BLAST of HG10010338 vs. TAIR 10
Match:
AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 412.1 bits (1058), Expect = 7.4e-115
Identity = 208/536 (38.81%), Postives = 333/536 (62.13%), Query Frame = 0
Query: 68 CYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSSVVPNDFT 127
C + F + + R+F+ MP +VVS+ +++AGY +G AL + R M + + P+ FT
Sbjct: 186 CIMPF-GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 245
Query: 128 FATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKARSVFNSMS 187
++ + S ++ G++ H YV G ++ + SSL+ MY K + + VF+ +
Sbjct: 246 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 305
Query: 188 CKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASLGRLVSGK 247
C++ +SWNS++A Y QN ++AL++FR+ + + P +SVI ACA L L GK
Sbjct: 306 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGK 365
Query: 248 VVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSIIVSTAKYG 307
+HG +R G S+ +AS LVDMY+KCG+++ + K+F+R++ + +T+II+ A +G
Sbjct: 366 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 425
Query: 308 FGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGIMPETKHY 367
G +++ LFEEM R+G+KPN + FV VL ACSH GL +E Y SM + YG+ E +HY
Sbjct: 426 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY 485
Query: 368 TCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKACQQLVNS 427
V D+L RAG+L++AY M V + +W LLS+ H +++A K +++
Sbjct: 486 AAVADLLGRAGKLEEAYNFISKMCV--EPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 545
Query: 428 NRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYVFYAGDIT 487
+ + GAYV + N YAS G ++ +LR+ M+ G++K+P CSWIE+K+ ++ F +GD
Sbjct: 546 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD-R 605
Query: 488 SCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLALGFGLIS 547
S P D++ L+ + +M++ GYV + G V D++EE + E ++ HSERLA+ FG+I+
Sbjct: 606 SHPSMDKINEFLKAVMEQMEKEGYVADTSG-VLHDVDEEHKRELLFGHSERLAVAFGIIN 665
Query: 548 ISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCNDFW 604
G TIR+ KN+R+C+DCH A K IS+I ERE +VRD +RFHHF G C+C D+W
Sbjct: 666 TEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
BLAST of HG10010338 vs. TAIR 10
Match:
AT4G14050.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 409.1 bits (1050), Expect = 6.3e-114
Identity = 219/598 (36.62%), Postives = 354/598 (59.20%), Query Frame = 0
Query: 40 LVSSISTHSIALKLGFLNHTVAVNHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAG 99
L ++ + H+ +KLG + N L+N Y + + A ++FDEMP+ + ++W S++
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 100 YIDNGRPNTALLLFRAM-SRSSVVPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGG 159
L +F ++ S S + P+DF F+ +KAC+ L ++ HG + H + + Y
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 160 NIVVCSSLIAMYGKCNDVVKARSVFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFR--- 219
+ VV SSL+ MY KC + A++VF+S+ KN +SW +M++ YA++ ++AL++FR
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 220 -------------------------EFSSLSSEHP---NPYMLASVISACASLGRLVSGK 279
F+ + E +P +L+S++ ACA+L ++G+
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 280 VVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSIIVSTAKYG 339
VHG I LG DS +++ L+DMYAKC + + +F+R+ + V+ +TS+IV A++G
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 340 FGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGIMPETKHY 399
K+L L+++MV G+KPN +TFVG+++ACSH G +G + SM + YGI P +HY
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 400 TCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKACQQLVNS 459
TC++D+L R+G LD+A L +M D+ W ALLSA + GR + + LV+S
Sbjct: 379 TCLLDLLGRSGLLDEAENLIHTMPFPPDEPT--WAALLSACKRQGRGQMGIRIADHLVSS 438
Query: 460 NR-QVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYVFYAGDI 519
+ + Y+ LSN YASA K R ++ V+K+PG S +E++ + VFYAG+
Sbjct: 439 FKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGE- 498
Query: 520 TSCPRGDEVLRLLRELDRKMKER-GYVRGSKGLVFVDIEEEAEEEKVWLHSERLALGFGL 579
TS P +++ RLL++L+ +M+ R GYV + ++ D++E+ +E+ ++ HSER A+ +GL
Sbjct: 499 TSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILH-DMDEQEKEKLLFWHSERSAVAYGL 558
Query: 580 ISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCNDFW 604
+ G IRI+KNLR+C DCH K ISEI ERE +VRD R+HHFK G C+CNDFW
Sbjct: 559 LKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
BLAST of HG10010338 vs. TAIR 10
Match:
AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 408.7 bits (1049), Expect = 8.2e-114
Identity = 209/542 (38.56%), Postives = 326/542 (60.15%), Query Frame = 0
Query: 63 NHLINCYVRFRNVATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSR-SSV 122
N ++N Y + A +LFDEM + SWT+++ GY+ +P AL+L+ M R +
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 123 VPNDFTFATAIKACSILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKARS 182
PN FT + A+ A + + +R G++ H ++ G + V+ SSL+ MYGKC + +AR+
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 183 VFNSMSCKNIVSWNSMIAAYAQNAHGDDALKVFREFSSLSSEHPNPYMLASVISACASLG 242
+F+ + K++VSW SMI Y +++ + +F E S E PN Y A V++ACA L
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLT 334
Query: 243 RLVSGKVVHGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSIIV 302
GK VHG R+G D +S LVDMY KCG++E + V + P ++ +TS+I
Sbjct: 335 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 394
Query: 303 STAKYGFGRKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGIM 362
A+ G ++L+ F+ +++ G KP+H+TFV VL AC+H+GL +GL++ S+ E++ +
Sbjct: 395 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 454
Query: 363 PETKHYTCVVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKAC 422
+ HYTC+VD+LAR+G+ ++ + M + LW ++L +G +D+A +A
Sbjct: 455 HTSDHYTCLVDLLARSGRFEQLKSVISEMPM--KPSKFLWASVLGGCSTYGNIDLAEEAA 514
Query: 423 QQLVNSNRQVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYVF 482
Q+L + YVT++N YA+AG E+ ++R M+ GV K PG SW EIK +VF
Sbjct: 515 QELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVF 574
Query: 483 YAGDITSCPRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLAL 542
A D TS P ++++ LREL +KMKE GYV + LV D+E+E +EE + HSE+LA+
Sbjct: 575 IAAD-TSHPMYNQIVEFLRELRKKMKEEGYVPAT-SLVLHDVEDEQKEENLVYHSEKLAV 634
Query: 543 GFGLISISKGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCND 602
F ++S +G I++ KNLR C DCH A K IS I +R+ VRD RFH F++G C+C D
Sbjct: 635 AFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGD 691
Query: 603 FW 604
+W
Sbjct: 695 YW 691
BLAST of HG10010338 vs. TAIR 10
Match:
AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 404.4 bits (1038), Expect = 1.6e-112
Identity = 223/594 (37.54%), Postives = 342/594 (57.58%), Query Frame = 0
Query: 15 LSRENERLSFQTIQNLSRHLRNCNDLVSSISTHSIALKLGFLNHTVAVNHLINCYVRFRN 74
LS+E+ S QT + L + + L ++ H L G LI Y +
Sbjct: 69 LSQESSP-SQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS 128
Query: 75 VATAHRLFDEMPNPNVVSWTSLMAGYIDNGRPNTALLLFRAMSRSSVVPNDFTFATAIKA 134
V A ++FD+ + W +L G L L+ M+R V + FT+ +KA
Sbjct: 129 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 188
Query: 135 C----SILSNLRHGEKFHAYVEIFGYGGNIVVCSSLIAMYGKCNDVVKARSVFNSMSCKN 194
C +++L G++ HA++ GY ++ + ++L+ MY + V A VF M +N
Sbjct: 189 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 248
Query: 195 IVSWNSMIAAYAQNAHGDDALKVFRE-FSSLSSEHPNPYMLASVISACASLGRLVSGKVV 254
+VSW++MIA YA+N +AL+ FRE PN + SV+ ACASL L GK++
Sbjct: 249 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 308
Query: 255 HGAAIRLGCDSSDVVASVLVDMYAKCGSLEYSDKVFNRISNPSVIPYTSIIVSTAKYGFG 314
HG +R G DS V S LV MY +CG LE +VF+R+ + V+ + S+I S +G+G
Sbjct: 309 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 368
Query: 315 RKSLQLFEEMVRKGLKPNHITFVGVLHACSHSGLPNEGLDYLTSMYERYGIMPETKHYTC 374
+K++Q+FEEM+ G P +TFV VL ACSH GL EG +M+ +GI P+ +HY C
Sbjct: 369 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 428
Query: 375 VVDMLARAGQLDKAYQLAKSMEVASDDKALLWGALLSASRCHGRVDIAAKACQQLVNSNR 434
+VD+L RA +LD+A ++ + M K +WG+LL + R HG V++A +A ++L
Sbjct: 429 MVDLLGRANRLDEAAKMVQDMRTEPGPK--VWGSLLGSCRIHGNVELAERASRRLFALEP 488
Query: 435 QVAGAYVTLSNAYASAGDMEKAHRLRVEMKHTGVQKEPGCSWIEIKDSSYVFYAGDITSC 494
+ AG YV L++ YA A ++ R++ ++H G+QK PG W+E++ Y F + D +
Sbjct: 489 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN- 548
Query: 495 PRGDEVLRLLRELDRKMKERGYVRGSKGLVFVDIEEEAEEEKVWLHSERLALGFGLISIS 554
P +++ L +L MKE+GY+ +KG+++ ++E E +E V HSE+LAL FGLI+ S
Sbjct: 549 PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLY-ELETEEKERIVLGHSEKLALAFGLINTS 608
Query: 555 KGLTIRIMKNLRMCSDCHEAFKLISEIVEREFVVRDINRFHHFKSGCCTCNDFW 604
KG IRI KNLR+C DCH K IS+ +E+E +VRD+NRFH FK+G C+C D+W
Sbjct: 609 KGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038875319.1 | 0.0e+00 | 91.54 | pentatricopeptide repeat-containing protein At4g15720 isoform X1 [Benincasa hisp... | [more] |
XP_004143199.1 | 0.0e+00 | 90.71 | pentatricopeptide repeat-containing protein At4g15720 [Cucumis sativus] >KGN4719... | [more] |
XP_008458473.1 | 0.0e+00 | 90.55 | PREDICTED: pentatricopeptide repeat-containing protein At4g15720 [Cucumis melo] | [more] |
XP_022138437.1 | 4.9e-294 | 83.25 | pentatricopeptide repeat-containing protein At4g15720 [Momordica charantia] | [more] |
KAG7026300.1 | 2.7e-292 | 83.61 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
Q8VYH0 | 3.3e-184 | 57.32 | Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana OX... | [more] |
Q9LW63 | 1.0e-113 | 38.81 | Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... | [more] |
O23266 | 8.9e-113 | 36.62 | Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidop... | [more] |
O23169 | 1.2e-112 | 38.56 | Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX... | [more] |
Q9STF3 | 2.2e-111 | 37.54 | Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KEC7 | 0.0e+00 | 90.71 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1972... | [more] |
A0A1S3C8I5 | 0.0e+00 | 90.55 | pentatricopeptide repeat-containing protein At4g15720 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1CB36 | 2.4e-294 | 83.25 | pentatricopeptide repeat-containing protein At4g15720 OS=Momordica charantia OX=... | [more] |
A0A6J1ER03 | 2.2e-292 | 83.28 | pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1KGB2 | 1.0e-289 | 82.78 | pentatricopeptide repeat-containing protein At4g15720 OS=Cucurbita maxima OX=366... | [more] |
Match Name | E-value | Identity | Description | |
AT4G15720.1 | 2.3e-185 | 57.32 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G23330.1 | 7.4e-115 | 38.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G14050.1 | 6.3e-114 | 36.62 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G37170.1 | 8.2e-114 | 38.56 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G46790.1 | 1.6e-112 | 37.54 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |