Homology
BLAST of HG10009309 vs. NCBI nr
Match:
XP_038907062.1 (DNA mismatch repair protein MSH4 isoform X1 [Benincasa hispida])
HSP 1 Score: 1501.1 bits (3885), Expect = 0.0e+00
Identity = 767/792 (96.84%), Postives = 776/792 (97.98%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MEDD GERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
Sbjct: 1 MEDDAGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VILVPPNKLAPDGMVGVSVLADRFF TVKKVVMAR CFDDTKGAVLIKNL+AKEPSALGL
Sbjct: 61 VILVPPNKLAPDGMVGVSVLADRFFATVKKVVMARACFDDTKGAVLIKNLAAKEPSALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
ETYYKQYYLCLAAAAASIKWIEAEKG+IVTNHSL VTFNGSSDHVSIDATSVQNLEIIEP
Sbjct: 121 ETYYKQYYLCLAAAAASIKWIEAEKGIIVTNHSLLVTFNGSSDHVSIDATSVQNLEIIEP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
Sbjct: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQALRKFPKETDRVLCHFCFKQK TNEVLRA NAKKSQNLISSIILLKTALEAL
Sbjct: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKKATNEVLRAANAKKSQNLISSIILLKTALEAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
PLLSKVLKEAKSFLL NIYKSVCENEKFATIRKRI EVIDEDVLHARVPFIARTQQCFAV
Sbjct: 301 PLLSKVLKEAKSFLLANIYKSVCENEKFATIRKRIEEVIDEDVLHARVPFIARTQQCFAV 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK
Sbjct: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRT+ICLEGLVDAIREDVSMLTL
Sbjct: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDMIVNSFAHTISTKPV RY RPNFTDNGPMAIEA RHPILESIHNDFVANSI
Sbjct: 481 LAEVLCLLDMIVNSFAHTISTKPVDRYNRPNFTDNGPMAIEAGRHPILESIHNDFVANSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
FLSEA+N+IIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD
Sbjct: 541 FLSEAANMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY
Sbjct: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
TIF THMEGLSELAT+YPNVK+LHFHVDIRNNRLDFKFQLKDG+RHVPHYGL LAEVAGL
Sbjct: 661 TIFVTHMEGLSELATVYPNVKVLHFHVDIRNNRLDFKFQLKDGMRHVPHYGLSLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PSSVIETAR ITSRI+EKEERRMEINYLQYHPIRMAY VAQRLICLKYSSHDEDSIREAL
Sbjct: 721 PSSVIETARDITSRIMEKEERRMEINYLQYHPIRMAYNVAQRLICLKYSSHDEDSIREAL 780
Query: 781 QNLKEGYISGRL 793
QNLKEGYISGRL
Sbjct: 781 QNLKEGYISGRL 792
BLAST of HG10009309 vs. NCBI nr
Match:
XP_038907063.1 (DNA mismatch repair protein MSH4 isoform X2 [Benincasa hispida])
HSP 1 Score: 1494.6 bits (3868), Expect = 0.0e+00
Identity = 766/792 (96.72%), Postives = 775/792 (97.85%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MEDD GERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
Sbjct: 1 MEDDAGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VILVPPNKLAPDGMVGVSVLADRFF TVKKVVMAR CFDDTKGAVLIKNL+AKEPSALGL
Sbjct: 61 VILVPPNKLAPDGMVGVSVLADRFFATVKKVVMARACFDDTKGAVLIKNLAAKEPSALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
ETYYKQYYLCLAAAAASIKWIEAEKG+IVTNHSL VTFNGSSDHVSIDATSVQNLEIIEP
Sbjct: 121 ETYYKQYYLCLAAAAASIKWIEAEKGIIVTNHSLLVTFNGSSDHVSIDATSVQNLEIIEP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
Sbjct: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQALRKFPKETDRVLCHFCFKQK TNEVLRA NAKKSQNLISSIILLKTALEAL
Sbjct: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKKATNEVLRAANAKKSQNLISSIILLKTALEAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
PLLSKVLKEAKSFLL NIYKSVCENEKFATIRKRI EVIDEDVLHARVPFIARTQQCFAV
Sbjct: 301 PLLSKVLKEAKSFLLANIYKSVCENEKFATIRKRIEEVIDEDVLHARVPFIARTQQCFAV 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK
Sbjct: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRT+ICLEGLVDAIREDVSMLTL
Sbjct: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDMIVNSFAHTISTKPV RY RPNFTDNGPMAIEA RHPILESIHNDFVANSI
Sbjct: 481 LAEVLCLLDMIVNSFAHTISTKPVDRYNRPNFTDNGPMAIEAGRHPILESIHNDFVANSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
FLSEA+N+IIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD
Sbjct: 541 FLSEAANMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
SLESNSSTFMTEMKETAFVMQNVSQ SLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY
Sbjct: 601 SLESNSSTFMTEMKETAFVMQNVSQ-SLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
TIF THMEGLSELAT+YPNVK+LHFHVDIRNNRLDFKFQLKDG+RHVPHYGL LAEVAGL
Sbjct: 661 TIFVTHMEGLSELATVYPNVKVLHFHVDIRNNRLDFKFQLKDGMRHVPHYGLSLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PSSVIETAR ITSRI+EKEERRMEINYLQYHPIRMAY VAQRLICLKYSSHDEDSIREAL
Sbjct: 721 PSSVIETARDITSRIMEKEERRMEINYLQYHPIRMAYNVAQRLICLKYSSHDEDSIREAL 780
Query: 781 QNLKEGYISGRL 793
QNLKEGYISGRL
Sbjct: 781 QNLKEGYISGRL 791
BLAST of HG10009309 vs. NCBI nr
Match:
XP_008437055.1 (PREDICTED: DNA mismatch repair protein MSH4 [Cucumis melo] >KAA0039729.1 DNA mismatch repair protein MSH4 [Cucumis melo var. makuwa])
HSP 1 Score: 1484.9 bits (3843), Expect = 0.0e+00
Identity = 762/792 (96.21%), Postives = 775/792 (97.85%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MED ERSSFV+GLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
Sbjct: 1 MED---ERSSFVVGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VILV PNKLAPDGMVGVSVLADRFF TVKKVVMAR CFDDTKGAVLIKNL+AKEPSALGL
Sbjct: 61 VILVSPNKLAPDGMVGVSVLADRFFATVKKVVMARSCFDDTKGAVLIKNLAAKEPSALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSL VTFNGSSDHVSIDATSVQNLEIIEP
Sbjct: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLLVTFNGSSDHVSIDATSVQNLEIIEP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
Sbjct: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQALRKFPKETDRVLCHFCFKQK VTNEVL +AKKSQNLISSIILLKTALEAL
Sbjct: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLHPGDAKKSQNLISSIILLKTALEAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
PLLSK+LKEAKSFLL NIYKSVCENEK+A IRKRIGEVIDEDVLHARVPFIARTQQCFAV
Sbjct: 301 PLLSKILKEAKSFLLANIYKSVCENEKYANIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK
Sbjct: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LP+KFIQVLKHGNNIRCSTLELASLNVRNKSAAGECY+RT+ICLEGLVDAIREDVSMLTL
Sbjct: 421 LPNKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYLRTEICLEGLVDAIREDVSMLTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDMIVNSFAHTISTKPV RYTRPNFT+NGPMAIEAARHPILESIHNDFVANSI
Sbjct: 481 LAEVLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHPILESIHNDFVANSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
FLSEASN+IIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD
Sbjct: 541 FLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
SLESNSSTFMTEMKETAFVMQNVS+RSLVVVDELGR+TSSSDGFAIAWSCCEHLL+LKAY
Sbjct: 601 SLESNSSTFMTEMKETAFVMQNVSRRSLVVVDELGRSTSSSDGFAIAWSCCEHLLTLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL
Sbjct: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PSSVIETAR ITSRI EKEERRMEINYLQYHPIRMAY VAQRLICLKYSSHDEDSIREAL
Sbjct: 721 PSSVIETARDITSRIKEKEERRMEINYLQYHPIRMAYNVAQRLICLKYSSHDEDSIREAL 780
Query: 781 QNLKEGYISGRL 793
QNLKEGYISGRL
Sbjct: 781 QNLKEGYISGRL 789
BLAST of HG10009309 vs. NCBI nr
Match:
XP_022996171.1 (DNA mismatch repair protein MSH4 [Cucurbita maxima])
HSP 1 Score: 1482.2 bits (3836), Expect = 0.0e+00
Identity = 757/792 (95.58%), Postives = 778/792 (98.23%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MEDDGGERSS+VIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
Sbjct: 1 MEDDGGERSSYVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VILVPPNKLAPDGMVGVSVL DRF+ +VKKVVMAR CFDDTKGAVLIKNL+AKEPSALGL
Sbjct: 61 VILVPPNKLAPDGMVGVSVLVDRFYVSVKKVVMARGCFDDTKGAVLIKNLAAKEPSALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSL+VTFNGSSDHVSIDATSVQNLEIIEP
Sbjct: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLTVTFNGSSDHVSIDATSVQNLEIIEP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
LHSNLWGTSNKKRSL++MLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
Sbjct: 181 LHSNLWGTSNKKRSLFHMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQALRKFPKETDRVLCHFCFKQK VTNEVL ADNAKKSQ+LISSIILLKT+LEAL
Sbjct: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIILLKTSLEAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
PLLSKVLKEAK+FLL NIY SVCENEKFATIR+RIGEVIDEDVLHARVPFIARTQQCFAV
Sbjct: 301 PLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIARTQQCFAV 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIP KDVQGK
Sbjct: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPRKDVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRT+ICLEGLVDAIREDVSMLTL
Sbjct: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDM+VNSFAHTIS+KPV RYTRPNFT++GPMAIEAARHPILESIHNDFVANSI
Sbjct: 481 LAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHPILESIHNDFVANSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
FLSEASN+IIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPA FSTLRVVDRIFTRMGT+D
Sbjct: 541 FLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAQFSTLRVVDRIFTRMGTED 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
SLESNSSTFMTEMKETAFVMQNVS RSLVVVDELGRATSSSDGFAIAWSCCE+LLSLKAY
Sbjct: 601 SLESNSSTFMTEMKETAFVMQNVSHRSLVVVDELGRATSSSDGFAIAWSCCEYLLSLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
TIFATHM+GLSEL TIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL
Sbjct: 661 TIFATHMDGLSELVTIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PSSVIETAR ITSRI+EKEERRMEINYLQYHPIRMAY VAQRLICLKYSSHDEDSIREAL
Sbjct: 721 PSSVIETARNITSRIMEKEERRMEINYLQYHPIRMAYNVAQRLICLKYSSHDEDSIREAL 780
Query: 781 QNLKEGYISGRL 793
QNLKEGYISGRL
Sbjct: 781 QNLKEGYISGRL 792
BLAST of HG10009309 vs. NCBI nr
Match:
XP_023521478.1 (DNA mismatch repair protein MSH4-like [Cucurbita pepo subsp. pepo] >XP_023532701.1 DNA mismatch repair protein MSH4-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1477.6 bits (3824), Expect = 0.0e+00
Identity = 754/792 (95.20%), Postives = 777/792 (98.11%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MEDDGGERSS+VIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
Sbjct: 1 MEDDGGERSSYVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VILVPPNKLAPDGMVGVSVL DRF+ TVKKVVMAR CFDDTKGAVLIKNL+AKEPSALGL
Sbjct: 61 VILVPPNKLAPDGMVGVSVLVDRFYVTVKKVVMARGCFDDTKGAVLIKNLAAKEPSALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSL+VTFNGSSDHVSIDATSV NLEIIEP
Sbjct: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLTVTFNGSSDHVSIDATSVHNLEIIEP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
LHSNLWGTSNKKRSL++MLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
Sbjct: 181 LHSNLWGTSNKKRSLFHMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQALRKFPKETDRVLCHFCFKQK VTNEVL ADNAKKSQ+LISSIILLKT+LEAL
Sbjct: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIILLKTSLEAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
PLLSKVLKEAK+FLL NIY SVCENEKFATIR+RIGEVIDEDVLHARVPFIARTQQCFAV
Sbjct: 301 PLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIARTQQCFAV 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIP KDVQGK
Sbjct: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPRKDVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRT+ICLEGLVDAIREDVSMLTL
Sbjct: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDM+VNSFAHTIS+KPV RYTRPNFT++GPMAIEAARHPILESIHNDFVANSI
Sbjct: 481 LAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHPILESIHNDFVANSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
FLSEASN+IIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPA FSTLRVVDRIFTRMGT+D
Sbjct: 541 FLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAQFSTLRVVDRIFTRMGTED 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
SLESNSSTFMTEMKETAFVMQNVS RSLVVVDELGRATSSSDGFAIAWSCCE+LLSLKAY
Sbjct: 601 SLESNSSTFMTEMKETAFVMQNVSHRSLVVVDELGRATSSSDGFAIAWSCCEYLLSLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
TIFATHM+GLSEL TIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL
Sbjct: 661 TIFATHMDGLSELVTIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PSSVIETA+ ITSRI+EKEERRMEINYLQYHPIRMAY VAQRLICLK+SSHDEDSIREAL
Sbjct: 721 PSSVIETAKNITSRIMEKEERRMEINYLQYHPIRMAYNVAQRLICLKHSSHDEDSIREAL 780
Query: 781 QNLKEGYISGRL 793
QNLKEGYI+GRL
Sbjct: 781 QNLKEGYINGRL 792
BLAST of HG10009309 vs. ExPASy Swiss-Prot
Match:
F4JP48 (DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=2 SV=1)
HSP 1 Score: 1276.9 bits (3303), Expect = 0.0e+00
Identity = 635/792 (80.18%), Postives = 721/792 (91.04%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MEDDGGERSSFV GLIENRAKEVG+AAFDLRSASLHLSQYIETSSSYQNTKTLL FYDP
Sbjct: 1 MEDDGGERSSFVAGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPS 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VI+VPPNKLA DGMVGVS L DR + TV+KVV AR CFDDTKGAVLI+NL+A+EP ALGL
Sbjct: 61 VIIVPPNKLAADGMVGVSELVDRCYSTVRKVVFARGCFDDTKGAVLIQNLAAEEPLALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
+TYYKQ+YL LAAAAA+IKWIEAEKGVIVTNHSL+VTFNGS DH++IDATSV+NLE+I+P
Sbjct: 121 DTYYKQHYLSLAAAAATIKWIEAEKGVIVTNHSLTVTFNGSFDHMNIDATSVENLELIDP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
H+ L GTSNKKRSL+ M KTTKT GG+RLLRANLLQPLKDIETIN RLDCLDELMSNEQ
Sbjct: 181 FHNALLGTSNKKRSLFQMFKTTKTAGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQ LRKFPKETDRVLCHFCFK K VT V+ +N +KSQN+ISSIILLKTAL+AL
Sbjct: 241 LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAVIGFENTRKSQNMISSIILLKTALDAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
P+L+KVLK+AK FLL N+YKSVCEN+++A+IRK+IGEVID+DVLHARVPF+ARTQQCFA+
Sbjct: 301 PILAKVLKDAKCFLLANVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVARTQQCFAL 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDG LDIARRTFCDTSEAIHNLA+KYREE+ LPNLKLPFNNRQGF+ IP K+VQGK
Sbjct: 361 KAGIDGFLDIARRTFCDTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRIPQKEVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LP+KF QV+KHG NI CS+LELASLNVRNKSAAGEC+IRT+ CLE L+DAIRED+S LTL
Sbjct: 421 LPNKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFIRTETCLEALMDAIREDISALTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDMIVNSFAHTISTKPV RY+RP TD+GP+AI+A RHPILESIHNDFV+NSI
Sbjct: 481 LAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRHPILESIHNDFVSNSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
F+SEA+N+++VMGPNMSGKSTYLQQ+CL+VILAQIGCYVPA F+T+RVVDRIFTRMGT D
Sbjct: 541 FMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMD 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
+LESNSSTFMTEM+ETAF+MQNV+ RSL+V+DELGRATSSSDG A+AWSCCE+LLSLKAY
Sbjct: 601 NLESNSSTFMTEMRETAFIMQNVTNRSLIVMDELGRATSSSDGLAMAWSCCEYLLSLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
T+FATHM+ L+ELATIYPNVK+LHF+VDIR+NRLDFKFQL+DG HVPHYGLLLAEVAGL
Sbjct: 661 TVFATHMDSLAELATIYPNVKVLHFYVDIRDNRLDFKFQLRDGTLHVPHYGLLLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PS+VI+TAR IT RI +KE +R+E+N ++H I Y VAQRLICLKYS EDSIR+AL
Sbjct: 721 PSTVIDTARIITKRITDKENKRIELNCGKHHEIHRIYRVAQRLICLKYSRQTEDSIRQAL 780
Query: 781 QNLKEGYISGRL 793
QNL E + RL
Sbjct: 781 QNLNESFTEERL 792
BLAST of HG10009309 vs. ExPASy Swiss-Prot
Match:
O15457 (MutS protein homolog 4 OS=Homo sapiens OX=9606 GN=MSH4 PE=1 SV=2)
HSP 1 Score: 451.1 bits (1159), Expect = 2.7e-125
Identity = 286/792 (36.11%), Postives = 469/792 (59.22%), Query Frame = 0
Query: 10 SFVIGLIENRA---KEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPMVILVPP 69
S ++ ++E R E+G+A+ DL++ + LSQ+ + +++Y T L P+ I++
Sbjct: 155 SVIVAVVEGRGLARGEIGMASIDLKNPQIILSQFAD-NTTYAKVITKLKILSPLEIIMSN 214
Query: 70 NKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGLETYYKQ 129
A + L F V + R F++TKG I+ L E S + +E K
Sbjct: 215 TACAVGNSTKLFTLITENFKNVNFTTIQRKYFNETKGLEYIEQLCIAEFSTVLMEVQSK- 274
Query: 130 YYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEPLHSNLW 189
Y CLAA AA +K++E + + SL + F GS ID++S QNLE+ L +N
Sbjct: 275 -YYCLAAVAALLKYVEFIQNSVYAPKSLKICFQGSEQTAMIDSSSAQNLEL---LINNQD 334
Query: 190 GTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQLFFGLS 249
+N +L+ +L TKT GGSR LR+N+L+PL DIETIN RLDC+ EL+ +E+LFFGL
Sbjct: 335 YRNN--HTLFGVLNYTKTPGGSRRLRSNILEPLVDIETINMRLDCVQELLQDEELFFGLQ 394
Query: 250 QALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEALPLLSKV 309
+ +F +T+++L +V ++ + D +++ I+++I LK LE + L
Sbjct: 395 SVISRF-LDTEQLL--------SVLVQIPKQDTVNAAESKITNLIYLKHTLELVDPLKIA 454
Query: 310 LKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAVKAGIDG 369
+K + LL Y S+ E+++F I ++I VI++D + + RTQ+C+AV++ I+
Sbjct: 455 MKNCNTPLLRAYYGSL-EDKRFGIILEKIKTVINDDARYMKGCLNMRTQKCYAVRSNINE 514
Query: 370 LLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDV---QGKLPS 429
LDIARRT+ + + I + ++ E+Y LP L+ F++ +GF++ + + +LPS
Sbjct: 515 FLDIARRTYTEIVDDIAGMISQLGEKYSLP-LRTSFSSARGFFIQMTTDCIALPSDQLPS 574
Query: 430 KFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTLLAE 489
+FI++ K N+ ++ +L +N R + + E Y T + + L+ I E + L L++
Sbjct: 575 EFIKISKVKNSYSFTSADLIKMNERCQESLREIYHMTYMIVCKLLSEIYEHIHCLYKLSD 634
Query: 490 VLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDF-VANSIFL 549
+ +LDM++ SFAH + + Y RP FTD +AI+ HPILE I + +AN+ ++
Sbjct: 635 TVSMLDMLL-SFAHACT---LSDYVRPEFTDT--LAIKQGWHPILEKISAEKPIANNTYV 694
Query: 550 SEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSL 609
+E SN +I+ GPNMSGKSTYL+Q+ L I+AQIG YVPA +S+ R+ +IFTR+ TDD +
Sbjct: 695 TEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYSSFRIAKQIFTRISTDDDI 754
Query: 610 ESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAYTI 669
E+NSSTFM EMKE A+++ N + +SL+++DELGR T++ +G I ++ CE+LLSLKA+T+
Sbjct: 755 ETNSSTFMKEMKEIAYILHNANDKSLILIDELGRGTNTEEGIGICYAVCEYLLSLKAFTL 814
Query: 670 FATHMEGLSELATIYPNVKILHFHVD-IRNNRLD-----FKFQLKDGIRHVPHYGLLLAE 729
FATH L + +YPNV+ +HF V ++N + + ++L G+ +YGL AE
Sbjct: 815 FATHFLELCHIDALYPNVENMHFEVQHVKNTSRNKEAILYTYKLSKGLTEEKNYGLKAAE 874
Query: 730 VAGLPSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLI-CLKYSSHDEDS 788
V+ LP S++ A+ IT++ I ++ + + + + R Y +A RL+ + S D DS
Sbjct: 875 VSSLPPSIVLDAKEITTQ-ITRQILQNQRSTPEMERQRAVYHLATRLVQTARNSQLDPDS 920
BLAST of HG10009309 vs. ExPASy Swiss-Prot
Match:
Q99MT2 (MutS protein homolog 4 OS=Mus musculus OX=10090 GN=Msh4 PE=2 SV=1)
HSP 1 Score: 446.4 bits (1147), Expect = 6.6e-124
Identity = 285/792 (35.98%), Postives = 465/792 (58.71%), Query Frame = 0
Query: 10 SFVIGLIENRA---KEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPMVILVPP 69
S ++ ++E R E+G+A+ DL+S + LSQ+ + +++Y T L P+ I++
Sbjct: 177 SVIVAVVEGRGLARGEIGMASIDLKSPQIMLSQFAD-NTTYAKVITKLQVLSPLEIIMSN 236
Query: 70 NKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGLETYYKQ 129
+ L F V + R F++TKG I+ L E S++ +E +
Sbjct: 237 TACVVGNSTKLFTLITENFKNVNFTTVQRKYFNETKGLEYIEQLCIAEFSSVLMEV--QS 296
Query: 130 YYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEPLHSNLW 189
Y CLAAAAA +K++E + + SL + F GS ID++S QNLE+ L +N
Sbjct: 297 RYYCLAAAAALLKYVEFIQNSVYAPKSLKIYFQGSEQTAMIDSSSAQNLEL---LVNNQD 356
Query: 190 GTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQLFFGLS 249
SN +L+ +L TKT GGSR LR+N+L+PL D+ETI+ RLDC+ EL+ +E+LFFGL
Sbjct: 357 YRSN--HTLFGVLNYTKTAGGSRRLRSNILEPLVDVETISMRLDCVQELLQDEELFFGLQ 416
Query: 250 QALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEALPLLSKV 309
+ +F +T+++L +V ++ + D +++ I+++I LK LE + L
Sbjct: 417 SVISRF-LDTEQLL--------SVLVQIPKQDTVNAAESKITNLIYLKHTLELVEPLKVT 476
Query: 310 LKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAVKAGIDG 369
LK + LL Y S+ E+ +F I +I VI++D + + RTQ+C+AV++ I
Sbjct: 477 LKNCSTPLLRAYYGSL-EDHRFGLILDKIKTVINDDARYMKGCLNMRTQKCYAVRSNISE 536
Query: 370 LLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDV---QGKLPS 429
LDIARRT+ + + I + + E+Y LP L+ F++ +GF++ + +LPS
Sbjct: 537 FLDIARRTYTEIVDDIAGMIAQLAEKYSLP-LRTSFSSSRGFFIQMTTDCAALSSDQLPS 596
Query: 430 KFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTLLAE 489
+FI++ K N+ ++ +L +N R + + E Y T + + L+ I E + L L++
Sbjct: 597 EFIKISKVKNSYSFTSADLIKMNERCQESLREIYHMTYMIVCKLLSEIYEHIHCLYKLSD 656
Query: 490 VLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDF-VANSIFL 549
+ +LDM++ SFAH + + Y RP FTD +AI+ HPILE I + VAN+ ++
Sbjct: 657 TVSMLDMLL-SFAHACT---LSDYVRPEFTDT--LAIKQGWHPILEKISAEKPVANNTYI 716
Query: 550 SEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSL 609
+E SNV+I+ GPNMSGKSTYL+Q+ L I+AQIG YVPA +++ R+ +IFTR+ TDD +
Sbjct: 717 TEGSNVLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYASFRIAAQIFTRISTDDDI 776
Query: 610 ESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAYTI 669
E+NSSTFM EMKE A+++ N + +SL+++DELGR T++ +G I+++ CEHLLS+KA+T+
Sbjct: 777 ETNSSTFMKEMKEIAYILHNANDKSLILIDELGRGTNTEEGIGISYAVCEHLLSIKAFTL 836
Query: 670 FATHMEGLSELATIYPNVKILHFHVD-IRN-----NRLDFKFQLKDGIRHVPHYGLLLAE 729
F TH L L +Y NV+ +HF V ++N + + + ++L G+ +YGL AE
Sbjct: 837 FTTHFLELCHLDALYLNVENMHFEVQHVKNTSRNKDAILYTYKLSRGLTEEKNYGLKAAE 896
Query: 730 VAGLPSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLI-CLKYSSHDEDS 788
+ LPSS++ AR IT++ I ++ + + + + R Y +A RL+ + S + D
Sbjct: 897 ASSLPSSIVLDARDITTQ-ITRQILQNQRSSPEMDRQRAVYHLATRLVQAARNSQLEPDR 942
BLAST of HG10009309 vs. ExPASy Swiss-Prot
Match:
P40965 (MutS protein homolog 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MSH4 PE=1 SV=2)
HSP 1 Score: 269.6 bits (688), Expect = 1.1e-70
Identity = 211/718 (29.39%), Postives = 360/718 (50.14%), Query Frame = 0
Query: 23 VGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPMVILVPPNKLAPDGMVGVSVLAD 82
+G+ + + ++LS +++ S Y L Y P IL+P + LAP +++
Sbjct: 120 IGLCIINCNTGQMYLSDFMD-SQIYIRVVHKLQIYQPTEILIPSSSLAPTVSKLATMIKF 179
Query: 83 RFFPTVKKVVMARVCFDDTKG-AVLIKNLSAKEPSALGLETYY-KQYYLCLAAAAASI-- 142
TVK +R CF+ G A + K L L +E K + LC A+AA S
Sbjct: 180 NVAETVKIEEGSRKCFNSQDGLAAITKYLMDDTKKDLKIEEIIDKTFALCAASAAISYME 239
Query: 143 KWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEPLHSNLWGTSNKKRSLYNM 202
+ I + L + F G+ + + ID+ +V+ LE++E SL+
Sbjct: 240 EIISKSSRNLNAFRKLRIQFEGTENTMLIDSKTVRGLELVEN------KLDKNGISLWKF 299
Query: 203 LKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQLFFGLSQALRKFP---KE 262
L TT T G R LR ++LQPL D +I RL+ L+EL +N+ L L ++ P K
Sbjct: 300 LDTTSTKMGQRSLRNSILQPLTDRGSIEMRLEALEELKANDDLLQKLRLEMKSLPDLDKL 359
Query: 263 TDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEALPLLSKVLKE--AKSF 322
R+LC + + ++ D I+ ++LLK L+++ L L + +S
Sbjct: 360 FSRLLC--------INHSAIKPDQR------INYVLLLKETLQSVKSLKDALNDQLIQSR 419
Query: 323 LLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAVKAGIDGLLDIARR 382
L+ K + N+ I K I I+ED + A Q+ +AVK+ +GLLD++R+
Sbjct: 420 LISET-KKIFNNDAIMEIEKLINSCINEDCVWASSAIQLLNQRSYAVKSDSNGLLDVSRQ 479
Query: 383 TFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHK---DVQGKLPSKFIQVLK 442
+ + E + K+ NL +++ +GFYL I + D LP FI
Sbjct: 480 IYKEVKEEFFREVEDLTAKNKI-NLDHNYDSARGFYLRIKRQEFTDDVATLPDVFISRTI 539
Query: 443 HGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTLLAEVLCLLDM 502
N I C+TL + N R K E + ++ ++ L+D I +S L ++AE + +LD+
Sbjct: 540 KKNYIECTTLNIIKKNARLKEVMEEILLLSEETVDELLDKIATHISELFMIAEAVAILDL 599
Query: 503 IVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSIFLSE-ASNVI 562
+ SF + + + YT P FT+N + I +RHP+LE + +FV N+I ++ +S++
Sbjct: 600 VC-SFTYNLKE---NNYTIPIFTNN--LLIRDSRHPLLEKVLKNFVPNTISSTKHSSSLQ 659
Query: 563 IVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTF 622
I+ G NMSGKS YL+Q+ L+ I+AQ+G +PA + + V R+ R+ +DS+E SS F
Sbjct: 660 IITGCNMSGKSVYLKQVALICIMAQMGSGIPALYGSFPVFKRLHARV-CNDSMELTSSNF 719
Query: 623 MTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAYTIFATHMEG 682
EMKE A+ + +++ +L+++DELGR +S +DGF ++ + EHLL +A +TH +
Sbjct: 720 GFEMKEMAYFLDDINTETLLILDELGRGSSIADGFCVSLAVTEHLLRTEATVFLSTHFQD 779
Query: 683 LSELATIYPNVKILHFH-VDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIE 727
+ ++ + P V LH V + +N + +QL + + G+ + + P + E
Sbjct: 780 IPKIMSKKPAVSHLHMDAVLLNDNSVKMNYQLTQKSVAIENSGIRVVKKIFNPDIIAE 807
BLAST of HG10009309 vs. ExPASy Swiss-Prot
Match:
O94065 (MutS protein homolog 4 OS=Candida albicans OX=5476 GN=MSH4 PE=3 SV=1)
HSP 1 Score: 249.6 bits (636), Expect = 1.2e-64
Identity = 202/715 (28.25%), Postives = 352/715 (49.23%), Query Frame = 0
Query: 22 EVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPMVILVPPNKLAPDGMVGVSVLA 81
+VGV+ L++ L L + + SS++ T + Y+P I++P + ++
Sbjct: 53 DVGVSVLKLKTLELTLMSFCD-SSTFVRTVNQIQVYEPTSIILPEAQSHSQIEKLKYIIH 112
Query: 82 DRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGLETYYKQYYLCLAAAAASIKWI 141
V++ M F+ G +K + S LG ++ L LAAA A I +
Sbjct: 113 SNISDKVRERFMKAKVFNAFDGMNSLKLYTDINESTLGQVISNRK--LSLAAANACIDYC 172
Query: 142 EAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEPLHSNLWGTSNKKRSLYNMLKT 201
+ K VTN + + + + + ID +V++LE+++ L S +LY+ L
Sbjct: 173 VSTKMFRVTN-KIRLKYCMCENTMLIDTCTVRDLELVDSL-------SETGTTLYSFLNC 232
Query: 202 TKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLC 261
T G R+LR ++LQP +I R + L EL+++E + +L+
Sbjct: 233 CLTKMGMRILRTSILQPSTHENSIILRSESLQELINDEDALISIRSSLK----------- 292
Query: 262 HFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEALPLLSKVLKEAKSFLLENIYKS 321
H C +K V + L + I++IILLKT L+ ++ K ++ S LL + K
Sbjct: 293 HTCDLEK-VFSTFLEPRGLLSQEQEINNIILLKTVLQNTFVIRKSIQNVSSHLLVQV-KQ 352
Query: 322 VCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAVKAGIDGLLDIARRTFCDTSEA 381
+ E+E + I E I D A Q+ AVK+G++GLLD++RR E
Sbjct: 353 ILEHENVQHLLAIINEYIRNDCQWANNSTELANQRANAVKSGVNGLLDVSRRIRETLLEE 412
Query: 382 IHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQ-GKLPSKFIQVLKHGNNIRCSTL 441
+ L K EE ++ ++ F +GF++ I + LP I +K I C+T+
Sbjct: 413 VSELVAKLSEELEI-FMEYRFEISRGFFIKIKGNNTDINSLPEVLINRVKKRKTIECTTI 472
Query: 442 ELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTIS 501
EL + R E + + +I +L +++E + LD++ SFA+ S
Sbjct: 473 ELMKQSSRYNDIVSEITTLNSTIIHDMYTSINSYTPILLMVSEAIGTLDLLC-SFAYFTS 532
Query: 502 TKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSIFLS-EASNVIIVMGPNMSGK 561
+ YT P F + I + HPIL +++FVAN+ + E S + ++ G NMSGK
Sbjct: 533 LQK-DSYTCPEFAKE--VTIMRSLHPILGGNNSNFVANNYSCNHELSRIHVITGANMSGK 592
Query: 562 STYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMKETAFV 621
S YL+Q+ LVI+AQ+GC+VPA ++ +R+ + +++R+ + D+++ N+S+F EM ETA +
Sbjct: 593 SVYLRQIAYLVIMAQMGCFVPAEYARMRIFNSLYSRI-SSDNVDINASSFSKEMSETAVI 652
Query: 622 MQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAYTIFATHMEGLSELATIYPN 681
+ + SL+++DELGR +S +DGF+I + E L+ +A I TH ++++
Sbjct: 653 LNDSDGDSLILIDELGRGSSLTDGFSICLAILEDLICKEATVITTTHFRDIAQVLANKSC 712
Query: 682 VKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAG-LPSSVIETARGITS 734
V H N +L+ K+ L G + YG+ AEV+ LP +IE ++ + +
Sbjct: 713 VVTAHMQTVETNGQLEMKYNLVLGRNDIVGYGIRFAEVSNLLPQELIEDSKVVAN 737
BLAST of HG10009309 vs. ExPASy TrEMBL
Match:
A0A5A7TER1 (DNA mismatch repair protein MSH4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00610 PE=4 SV=1)
HSP 1 Score: 1484.9 bits (3843), Expect = 0.0e+00
Identity = 762/792 (96.21%), Postives = 775/792 (97.85%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MED ERSSFV+GLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
Sbjct: 1 MED---ERSSFVVGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VILV PNKLAPDGMVGVSVLADRFF TVKKVVMAR CFDDTKGAVLIKNL+AKEPSALGL
Sbjct: 61 VILVSPNKLAPDGMVGVSVLADRFFATVKKVVMARSCFDDTKGAVLIKNLAAKEPSALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSL VTFNGSSDHVSIDATSVQNLEIIEP
Sbjct: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLLVTFNGSSDHVSIDATSVQNLEIIEP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
Sbjct: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQALRKFPKETDRVLCHFCFKQK VTNEVL +AKKSQNLISSIILLKTALEAL
Sbjct: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLHPGDAKKSQNLISSIILLKTALEAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
PLLSK+LKEAKSFLL NIYKSVCENEK+A IRKRIGEVIDEDVLHARVPFIARTQQCFAV
Sbjct: 301 PLLSKILKEAKSFLLANIYKSVCENEKYANIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK
Sbjct: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LP+KFIQVLKHGNNIRCSTLELASLNVRNKSAAGECY+RT+ICLEGLVDAIREDVSMLTL
Sbjct: 421 LPNKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYLRTEICLEGLVDAIREDVSMLTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDMIVNSFAHTISTKPV RYTRPNFT+NGPMAIEAARHPILESIHNDFVANSI
Sbjct: 481 LAEVLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHPILESIHNDFVANSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
FLSEASN+IIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD
Sbjct: 541 FLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
SLESNSSTFMTEMKETAFVMQNVS+RSLVVVDELGR+TSSSDGFAIAWSCCEHLL+LKAY
Sbjct: 601 SLESNSSTFMTEMKETAFVMQNVSRRSLVVVDELGRSTSSSDGFAIAWSCCEHLLTLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL
Sbjct: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PSSVIETAR ITSRI EKEERRMEINYLQYHPIRMAY VAQRLICLKYSSHDEDSIREAL
Sbjct: 721 PSSVIETARDITSRIKEKEERRMEINYLQYHPIRMAYNVAQRLICLKYSSHDEDSIREAL 780
Query: 781 QNLKEGYISGRL 793
QNLKEGYISGRL
Sbjct: 781 QNLKEGYISGRL 789
BLAST of HG10009309 vs. ExPASy TrEMBL
Match:
A0A1S3ATN6 (DNA mismatch repair protein MSH4 OS=Cucumis melo OX=3656 GN=LOC103482597 PE=4 SV=1)
HSP 1 Score: 1484.9 bits (3843), Expect = 0.0e+00
Identity = 762/792 (96.21%), Postives = 775/792 (97.85%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MED ERSSFV+GLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
Sbjct: 1 MED---ERSSFVVGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VILV PNKLAPDGMVGVSVLADRFF TVKKVVMAR CFDDTKGAVLIKNL+AKEPSALGL
Sbjct: 61 VILVSPNKLAPDGMVGVSVLADRFFATVKKVVMARSCFDDTKGAVLIKNLAAKEPSALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSL VTFNGSSDHVSIDATSVQNLEIIEP
Sbjct: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLLVTFNGSSDHVSIDATSVQNLEIIEP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
Sbjct: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQALRKFPKETDRVLCHFCFKQK VTNEVL +AKKSQNLISSIILLKTALEAL
Sbjct: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLHPGDAKKSQNLISSIILLKTALEAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
PLLSK+LKEAKSFLL NIYKSVCENEK+A IRKRIGEVIDEDVLHARVPFIARTQQCFAV
Sbjct: 301 PLLSKILKEAKSFLLANIYKSVCENEKYANIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK
Sbjct: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LP+KFIQVLKHGNNIRCSTLELASLNVRNKSAAGECY+RT+ICLEGLVDAIREDVSMLTL
Sbjct: 421 LPNKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYLRTEICLEGLVDAIREDVSMLTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDMIVNSFAHTISTKPV RYTRPNFT+NGPMAIEAARHPILESIHNDFVANSI
Sbjct: 481 LAEVLCLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHPILESIHNDFVANSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
FLSEASN+IIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD
Sbjct: 541 FLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
SLESNSSTFMTEMKETAFVMQNVS+RSLVVVDELGR+TSSSDGFAIAWSCCEHLL+LKAY
Sbjct: 601 SLESNSSTFMTEMKETAFVMQNVSRRSLVVVDELGRSTSSSDGFAIAWSCCEHLLTLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL
Sbjct: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PSSVIETAR ITSRI EKEERRMEINYLQYHPIRMAY VAQRLICLKYSSHDEDSIREAL
Sbjct: 721 PSSVIETARDITSRIKEKEERRMEINYLQYHPIRMAYNVAQRLICLKYSSHDEDSIREAL 780
Query: 781 QNLKEGYISGRL 793
QNLKEGYISGRL
Sbjct: 781 QNLKEGYISGRL 789
BLAST of HG10009309 vs. ExPASy TrEMBL
Match:
A0A6J1K3Y6 (DNA mismatch repair protein MSH4 OS=Cucurbita maxima OX=3661 GN=LOC111491480 PE=4 SV=1)
HSP 1 Score: 1482.2 bits (3836), Expect = 0.0e+00
Identity = 757/792 (95.58%), Postives = 778/792 (98.23%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MEDDGGERSS+VIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
Sbjct: 1 MEDDGGERSSYVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VILVPPNKLAPDGMVGVSVL DRF+ +VKKVVMAR CFDDTKGAVLIKNL+AKEPSALGL
Sbjct: 61 VILVPPNKLAPDGMVGVSVLVDRFYVSVKKVVMARGCFDDTKGAVLIKNLAAKEPSALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSL+VTFNGSSDHVSIDATSVQNLEIIEP
Sbjct: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLTVTFNGSSDHVSIDATSVQNLEIIEP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
LHSNLWGTSNKKRSL++MLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
Sbjct: 181 LHSNLWGTSNKKRSLFHMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQALRKFPKETDRVLCHFCFKQK VTNEVL ADNAKKSQ+LISSIILLKT+LEAL
Sbjct: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIILLKTSLEAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
PLLSKVLKEAK+FLL NIY SVCENEKFATIR+RIGEVIDEDVLHARVPFIARTQQCFAV
Sbjct: 301 PLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIARTQQCFAV 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIP KDVQGK
Sbjct: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPRKDVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRT+ICLEGLVDAIREDVSMLTL
Sbjct: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDM+VNSFAHTIS+KPV RYTRPNFT++GPMAIEAARHPILESIHNDFVANSI
Sbjct: 481 LAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHPILESIHNDFVANSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
FLSEASN+IIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPA FSTLRVVDRIFTRMGT+D
Sbjct: 541 FLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAQFSTLRVVDRIFTRMGTED 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
SLESNSSTFMTEMKETAFVMQNVS RSLVVVDELGRATSSSDGFAIAWSCCE+LLSLKAY
Sbjct: 601 SLESNSSTFMTEMKETAFVMQNVSHRSLVVVDELGRATSSSDGFAIAWSCCEYLLSLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
TIFATHM+GLSEL TIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL
Sbjct: 661 TIFATHMDGLSELVTIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PSSVIETAR ITSRI+EKEERRMEINYLQYHPIRMAY VAQRLICLKYSSHDEDSIREAL
Sbjct: 721 PSSVIETARNITSRIMEKEERRMEINYLQYHPIRMAYNVAQRLICLKYSSHDEDSIREAL 780
Query: 781 QNLKEGYISGRL 793
QNLKEGYISGRL
Sbjct: 781 QNLKEGYISGRL 792
BLAST of HG10009309 vs. ExPASy TrEMBL
Match:
A0A6J1H107 (DNA mismatch repair protein MSH4 OS=Cucurbita moschata OX=3662 GN=LOC111459167 PE=4 SV=1)
HSP 1 Score: 1474.1 bits (3815), Expect = 0.0e+00
Identity = 752/792 (94.95%), Postives = 777/792 (98.11%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MEDDGGERSS+VIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
Sbjct: 1 MEDDGGERSSYVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VILVPPNKLAPDGMVGVSVL D+F+ TVKKVVMAR CFDDTKGAVLIKNL+AKEPSALGL
Sbjct: 61 VILVPPNKLAPDGMVGVSVLVDKFYVTVKKVVMARGCFDDTKGAVLIKNLAAKEPSALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSL+VTFNGSSDHVSIDATSVQNLEIIEP
Sbjct: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLTVTFNGSSDHVSIDATSVQNLEIIEP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
LHSNLWGTSNKKRSL++MLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
Sbjct: 181 LHSNLWGTSNKKRSLFHMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQALRKFPKETDRVLCHFCFKQK VTNEVL ADNAKKSQ+LISSIILLKT+LEAL
Sbjct: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKKVTNEVLGADNAKKSQSLISSIILLKTSLEAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
PLLSKVLKEAK+FLL NIY SVCENEKFATIR+RIGEVIDEDVLHARVPFIARTQQCFAV
Sbjct: 301 PLLSKVLKEAKNFLLANIYNSVCENEKFATIRRRIGEVIDEDVLHARVPFIARTQQCFAV 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIP KDVQGK
Sbjct: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPRKDVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LPSKFIQVLKHGNNIR STLELASLNVRNKSAAGECYIRT+ICLEGLVDAIREDVSMLTL
Sbjct: 421 LPSKFIQVLKHGNNIRFSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDM+VNSFAHTIS+KPV RYTRPNFT++GPMAIEAARHPILESIHNDFVANSI
Sbjct: 481 LAEVLCLLDMMVNSFAHTISSKPVDRYTRPNFTESGPMAIEAARHPILESIHNDFVANSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
FLSEASN+IIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPA FSTLRVVDRIFTRMGT+D
Sbjct: 541 FLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAQFSTLRVVDRIFTRMGTED 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
SLESNSSTFMTEMKETAFVMQNVS RSLVVVDELGRATSSSDGFAIAWSCCE+LLSLKAY
Sbjct: 601 SLESNSSTFMTEMKETAFVMQNVSHRSLVVVDELGRATSSSDGFAIAWSCCEYLLSLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
TIF+THM+GLSEL TIYPNVK+LHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL
Sbjct: 661 TIFSTHMDGLSELVTIYPNVKVLHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PSSVIETAR ITSRI+EKEERRMEINYLQYHPIRMAY VAQRLICLK+SSHDEDSIREAL
Sbjct: 721 PSSVIETARNITSRILEKEERRMEINYLQYHPIRMAYNVAQRLICLKHSSHDEDSIREAL 780
Query: 781 QNLKEGYISGRL 793
QNLKEGYI+GRL
Sbjct: 781 QNLKEGYINGRL 792
BLAST of HG10009309 vs. ExPASy TrEMBL
Match:
A0A6J1DNB3 (DNA mismatch repair protein MSH4 OS=Momordica charantia OX=3673 GN=LOC111021986 PE=4 SV=1)
HSP 1 Score: 1468.4 bits (3800), Expect = 0.0e+00
Identity = 753/793 (94.96%), Postives = 775/793 (97.73%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MEDD GERSS+VI LIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
Sbjct: 1 MEDDVGERSSYVIALIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VILVPPNKLAPDGMVGVSVLADRF+ TVKKVVMAR CFDDTKGAVLIKNL+AKEPSALGL
Sbjct: 61 VILVPPNKLAPDGMVGVSVLADRFYATVKKVVMARGCFDDTKGAVLIKNLAAKEPSALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP
Sbjct: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
LHSNLWGTSNKKRSL++MLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
Sbjct: 181 LHSNLWGTSNKKRSLFHMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQALRKFPKETDR+LCHFCFKQK VTNE+L ADNAKKSQ LISSIILLKTALEAL
Sbjct: 241 LFFGLSQALRKFPKETDRILCHFCFKQKKVTNEILGADNAKKSQILISSIILLKTALEAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
PLLSKVLKEAKSFLL NIYKSVCENE FA IRKRIGEVIDEDVLHARVPFIARTQQCFAV
Sbjct: 301 PLLSKVLKEAKSFLLANIYKSVCENENFAIIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDGLLDIARRTFCDTSEAIH LANKYREEYKLPNLKLPFNNRQGFYLSIP KDVQGK
Sbjct: 361 KAGIDGLLDIARRTFCDTSEAIHKLANKYREEYKLPNLKLPFNNRQGFYLSIPRKDVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQ+CLEGLV+AIREDVS+LTL
Sbjct: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQLCLEGLVEAIREDVSILTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDMIVNSFAHTIS+KPV RYTRP+FTDNGPMAIEAARHPILESIHNDFVANSI
Sbjct: 481 LAEVLCLLDMIVNSFAHTISSKPVDRYTRPSFTDNGPMAIEAARHPILESIHNDFVANSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
FLSEASN+IIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGT+D
Sbjct: 541 FLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTED 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
SLESNSSTFMTEMKETAFVMQNVS RSLVVVDELGRATSSSDGFAIAWSCCE+LLSLKAY
Sbjct: 601 SLESNSSTFMTEMKETAFVMQNVSHRSLVVVDELGRATSSSDGFAIAWSCCEYLLSLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
TIFATHMEGLSELATIYPNVKILHFHVDIRNNR++FKFQLKDGIRHV HYGLLLAEVAGL
Sbjct: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRMNFKFQLKDGIRHVAHYGLLLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYS-SHDEDSIREA 780
P+SVI+TAR ITSRI+EKEERRMEINYLQYHPIRMAY +AQRLICLKYS +HDEDSIREA
Sbjct: 721 PNSVIDTAREITSRIMEKEERRMEINYLQYHPIRMAYNIAQRLICLKYSNNHDEDSIREA 780
Query: 781 LQNLKEGYISGRL 793
LQNLKEGYISGRL
Sbjct: 781 LQNLKEGYISGRL 793
BLAST of HG10009309 vs. TAIR 10
Match:
AT4G17380.1 (MUTS-like protein 4 )
HSP 1 Score: 1276.9 bits (3303), Expect = 0.0e+00
Identity = 635/792 (80.18%), Postives = 721/792 (91.04%), Query Frame = 0
Query: 1 MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM 60
MEDDGGERSSFV GLIENRAKEVG+AAFDLRSASLHLSQYIETSSSYQNTKTLL FYDP
Sbjct: 1 MEDDGGERSSFVAGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPS 60
Query: 61 VILVPPNKLAPDGMVGVSVLADRFFPTVKKVVMARVCFDDTKGAVLIKNLSAKEPSALGL 120
VI+VPPNKLA DGMVGVS L DR + TV+KVV AR CFDDTKGAVLI+NL+A+EP ALGL
Sbjct: 61 VIIVPPNKLAADGMVGVSELVDRCYSTVRKVVFARGCFDDTKGAVLIQNLAAEEPLALGL 120
Query: 121 ETYYKQYYLCLAAAAASIKWIEAEKGVIVTNHSLSVTFNGSSDHVSIDATSVQNLEIIEP 180
+TYYKQ+YL LAAAAA+IKWIEAEKGVIVTNHSL+VTFNGS DH++IDATSV+NLE+I+P
Sbjct: 121 DTYYKQHYLSLAAAAATIKWIEAEKGVIVTNHSLTVTFNGSFDHMNIDATSVENLELIDP 180
Query: 181 LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ 240
H+ L GTSNKKRSL+ M KTTKT GG+RLLRANLLQPLKDIETIN RLDCLDELMSNEQ
Sbjct: 181 FHNALLGTSNKKRSLFQMFKTTKTAGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ 240
Query: 241 LFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQNLISSIILLKTALEAL 300
LFFGLSQ LRKFPKETDRVLCHFCFK K VT V+ +N +KSQN+ISSIILLKTAL+AL
Sbjct: 241 LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAVIGFENTRKSQNMISSIILLKTALDAL 300
Query: 301 PLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLHARVPFIARTQQCFAV 360
P+L+KVLK+AK FLL N+YKSVCEN+++A+IRK+IGEVID+DVLHARVPF+ARTQQCFA+
Sbjct: 301 PILAKVLKDAKCFLLANVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVARTQQCFAL 360
Query: 361 KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK 420
KAGIDG LDIARRTFCDTSEAIHNLA+KYREE+ LPNLKLPFNNRQGF+ IP K+VQGK
Sbjct: 361 KAGIDGFLDIARRTFCDTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRIPQKEVQGK 420
Query: 421 LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTL 480
LP+KF QV+KHG NI CS+LELASLNVRNKSAAGEC+IRT+ CLE L+DAIRED+S LTL
Sbjct: 421 LPNKFTQVVKHGKNIHCSSLELASLNVRNKSAAGECFIRTETCLEALMDAIREDISALTL 480
Query: 481 LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFTDNGPMAIEAARHPILESIHNDFVANSI 540
LAEVLCLLDMIVNSFAHTISTKPV RY+RP TD+GP+AI+A RHPILESIHNDFV+NSI
Sbjct: 481 LAEVLCLLDMIVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRHPILESIHNDFVSNSI 540
Query: 541 FLSEASNVIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD 600
F+SEA+N+++VMGPNMSGKSTYLQQ+CL+VILAQIGCYVPA F+T+RVVDRIFTRMGT D
Sbjct: 541 FMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMD 600
Query: 601 SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY 660
+LESNSSTFMTEM+ETAF+MQNV+ RSL+V+DELGRATSSSDG A+AWSCCE+LLSLKAY
Sbjct: 601 NLESNSSTFMTEMRETAFIMQNVTNRSLIVMDELGRATSSSDGLAMAWSCCEYLLSLKAY 660
Query: 661 TIFATHMEGLSELATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGL 720
T+FATHM+ L+ELATIYPNVK+LHF+VDIR+NRLDFKFQL+DG HVPHYGLLLAEVAGL
Sbjct: 661 TVFATHMDSLAELATIYPNVKVLHFYVDIRDNRLDFKFQLRDGTLHVPHYGLLLAEVAGL 720
Query: 721 PSSVIETARGITSRIIEKEERRMEINYLQYHPIRMAYIVAQRLICLKYSSHDEDSIREAL 780
PS+VI+TAR IT RI +KE +R+E+N ++H I Y VAQRLICLKYS EDSIR+AL
Sbjct: 721 PSTVIDTARIITKRITDKENKRIELNCGKHHEIHRIYRVAQRLICLKYSRQTEDSIRQAL 780
Query: 781 QNLKEGYISGRL 793
QNL E + RL
Sbjct: 781 QNLNESFTEERL 792
BLAST of HG10009309 vs. TAIR 10
Match:
AT3G18524.1 (MUTS homolog 2 )
HSP 1 Score: 183.7 bits (465), Expect = 5.7e-46
Identity = 171/605 (28.26%), Postives = 290/605 (47.93%), Query Frame = 0
Query: 167 IDATSVQNLEIIEPLHSNLWGTSNKKRSLYNMLKTTKTIG-GSRLLRANLLQPLKDIETI 226
+D+ +++ L ++E +NK SL+ ++ T T G G RLL L QPL D+ I
Sbjct: 296 LDSAAMRALNVMESKTD-----ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEI 355
Query: 227 NARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRADNAKKSQN 286
RLD + + GL Q LR+ K V +LR + ++ +
Sbjct: 356 KTRLDIVQCFVEEA----GLRQDLRQHLKRISDV------------ERLLR--SLERRRG 415
Query: 287 LISSIILLKTALEALPLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGEVIDEDVLH 346
+ II L + LP + +++ I + + + + + +G+ I D++
Sbjct: 416 GLQHIIKLYQSTIRLPFIKTAMQQYTGEFASLISERYLKKLEALSDQDHLGKFI--DLVE 475
Query: 347 ARVPFIARTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKL---PNLKLPF 406
V + + + D L + + IH L K E L LKL
Sbjct: 476 CSVDLDQLENGEYMISSSYDTKLASLKDQKELLEQQIHELHKKTAIELDLQVDKALKLDK 535
Query: 407 NNRQGFYLSIPHKD---VQGKLPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIR 466
+ G I K+ ++ KL ++FI + + ++ + +L L + +S +
Sbjct: 536 AAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQSVVDD---- 595
Query: 467 TQICLEGLVDAIREDVSMLTL----LAEVLCLLDMIVNSFAHTISTKPVHRYTRPNFT-- 526
+ C + LVD + E V+ + LA +L +D+++ SFA ++ P Y RP T
Sbjct: 596 YRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLL-SFADLAASCPT-PYCRPEITSS 655
Query: 527 DNGPMAIEAARHPILESIH-NDFVANSIFLSEASNVI-IVMGPNMSGKSTYLQQMCLLVI 586
D G + +E +RHP +E+ +F+ N L + IV GPNM GKST+++Q+ ++V+
Sbjct: 656 DAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVTGPNMGGKSTFIRQVGVIVL 715
Query: 587 LAQIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMKETAFVMQNVSQRSLVVV 646
+AQ+G +VP +++ + D IF R+G D STFM EM ETA +++ S +SL+++
Sbjct: 716 MAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIII 775
Query: 647 DELGRATSSSDGFAIAWSCCEHLLSLK-AYTIFATHMEGLSELATIYPNVK-----ILHF 706
DELGR TS+ DGF +AW+ CEHL+ +K A T+FATH L+ LA V + +F
Sbjct: 776 DELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELTALAQANSEVSGNTVGVANF 835
Query: 707 HV----DIRNNRLDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETARGITSRIIEKEER 747
HV D + +L ++++ G +G+ +AE A P SV+ AR + + +
Sbjct: 836 HVSAHIDTESRKLTMLYKVEPGACD-QSFGIHVAEFANFPESVVALAREKAAELEDFSPS 868
BLAST of HG10009309 vs. TAIR 10
Match:
AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )
HSP 1 Score: 174.1 bits (440), Expect = 4.5e-43
Identity = 168/622 (27.01%), Postives = 295/622 (47.43%), Query Frame = 0
Query: 161 SSDHVSIDATSVQNLEIIEPLHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLK 220
S+ +++ A ++Q LE+++ +N G ++ SL++ + T T+ GSRLLR + PL
Sbjct: 416 SNTEMTLSANTLQQLEVVK---NNSDG--SESGSLFHNMNHTLTVYGSRLLRHWVTHPLC 475
Query: 221 DIETINARLDCLDELMS--NEQLFFGLSQALRKFPKETDRVLCHFCFKQKNVTNEVLRAD 280
D I+ARLD + E+ + LS L + E V F +V + R+
Sbjct: 476 DRNLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRSS 535
Query: 281 NAKKSQNLISSIILLKT----ALEALPLLSKVLKEAKSFLLENIYKSVCENEKFATIRKR 340
+ ++ I T +EA+ L K ++ ++ +S+ +T+ ++
Sbjct: 536 DIQRGITRIFHRTAKATEFIAVMEAILLAGKQIQRL-GIKQDSEMRSMQSATVRSTLLRK 595
Query: 341 IGEVIDEDVLHARVPFIARTQQCFAVKAGIDG-LLDI-------------ARRTFCDTSE 400
+ VI V+ V + +A + G LLDI AR+ E
Sbjct: 596 LISVISSPVV---VDNAGKLLSALNKEAAVRGDLLDILITSSDQFPELAEARQAVLVIRE 655
Query: 401 AIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGKLPSKFIQVLKHGNNIRCSTL 460
+ + +R++ + NL+ + + +P V K+P +++V IR
Sbjct: 656 KLDSSIASFRKKLAIRNLEFLQVSGITHLIELP---VDSKVPMNWVKVNSTKKTIRYHPP 715
Query: 461 ELASLNVRNKSAAGECYIRTQICLEGLVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTIS 520
E+ + A I + + + + + + L LD + H++S
Sbjct: 716 EIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALAALDCL-----HSLS 775
Query: 521 TKPVHR-YTRPNFTDN---GPMAIEAARHPILESIHND-FVANSIFL-SEASNVIIVMGP 580
T ++ Y RP F D+ + I++ RHP+LE+I D FV N L +E I+ GP
Sbjct: 776 TLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVPNDTILHAEGEYCQIITGP 835
Query: 581 NMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMK 640
NM GKS Y++Q+ L+ I+AQ+G +VPA F+ L V+D +FTRMG DS++ STF+ E+
Sbjct: 836 NMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELS 895
Query: 641 ETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLK-AYTIFATHMEGLSEL 700
E + +++ S RSLV++DELGR TS+ DG AIA++ +HLL+ K +F TH ++E+
Sbjct: 896 EASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEI 955
Query: 701 ATIYPNVKILHFHVDIRNNRLDFKFQLKDGIRHV---------PHYGLLLAEVAGLPSSV 747
+ +P + +HV + D D + ++ +G +A++A +P S
Sbjct: 956 SNGFPG-SVGTYHVSYLTLQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSC 1015
BLAST of HG10009309 vs. TAIR 10
Match:
AT4G02070.1 (MUTS homolog 6 )
HSP 1 Score: 155.6 bits (392), Expect = 1.6e-37
Identity = 171/589 (29.03%), Postives = 265/589 (44.99%), Query Frame = 0
Query: 164 HVSIDATSVQNLEIIEPLHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIE 223
H+ +DA +++NLEI E +S G S +LY L T G RLL+ L +PL + E
Sbjct: 695 HMVLDAAALENLEIFE--NSRNGGYSG---TLYAQLNQCITASGKRLLKTWLARPLYNTE 754
Query: 224 TINARLDCLDELMSNEQLFFGLS--QALRKFP---KETDRVLCHFCFKQKNVTNEVLRAD 283
I R D + ++ E L + L ++L + P + R+ +N VL D
Sbjct: 755 LIKERQDAV-AILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYED 814
Query: 284 NAKKS-QNLISSIILLKTALEALPLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGE 343
AKK Q IS++ +T EA L +LK S L ++ ++ K +
Sbjct: 815 TAKKQVQEFISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKD 874
Query: 344 VIDEDVLHARVPFIARTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKY-REEYKL- 403
D H I G D D A C T E + K+ +E+ KL
Sbjct: 875 AFDWVEAHNSGRVIPH--------EGADEEYDCA----CKTVEEFESSLKKHLKEQRKLL 934
Query: 404 --PNLKLPFNNRQGFYLSIPHKDVQGKLPSKFIQVLKHGNNIRCSTLELASLNVRNKSAA 463
++ + + L +P + + G +P + R T + L A
Sbjct: 935 GDASINYVTVGKDEYLLEVP-ESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAK 994
Query: 464 GECYIRTQICLEGLVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTISTKPVH-RYTRPNF 523
E + + L+ E L LD++++ + S + V R
Sbjct: 995 SEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISGS 1054
Query: 524 TDNGPMAIEAA--RHPIL--ESI-HNDFVANSIFL--SEASNVIIVMGPNMSGKSTYLQQ 583
T +G + A HP+L +S+ FV N++ + +E ++ I++ GPNM GKST L+Q
Sbjct: 1055 TSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQ 1114
Query: 584 MCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMKETAFVMQNVSQ 643
+CL VILAQIG VPA + VD+I RMG D + + STF+TE+ ETA ++ + ++
Sbjct: 1115 VCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATR 1174
Query: 644 RSLVVVDELGRATSSSDGFAIAWSCCEHLL-SLKAYTIFATHMEGLSELATIYPNVKILH 703
SLVV+DELGR T++SDG AIA S EH + ++ F+TH LS P V + H
Sbjct: 1175 NSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNPKVSLCH 1234
Query: 704 FHVDIRN-----NRLDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA 729
I + F ++L G YG+ +A +AGLP V++ A
Sbjct: 1235 MACQIGEGIGGVEEVTFLYRLTPG-ACPKSYGVNVARLAGLPDYVLQRA 1263
BLAST of HG10009309 vs. TAIR 10
Match:
AT4G02070.2 (MUTS homolog 6 )
HSP 1 Score: 155.6 bits (392), Expect = 1.6e-37
Identity = 171/589 (29.03%), Postives = 265/589 (44.99%), Query Frame = 0
Query: 164 HVSIDATSVQNLEIIEPLHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIE 223
H+ +DA +++NLEI E +S G S +LY L T G RLL+ L +PL + E
Sbjct: 692 HMVLDAAALENLEIFE--NSRNGGYSG---TLYAQLNQCITASGKRLLKTWLARPLYNTE 751
Query: 224 TINARLDCLDELMSNEQLFFGLS--QALRKFP---KETDRVLCHFCFKQKNVTNEVLRAD 283
I R D + ++ E L + L ++L + P + R+ +N VL D
Sbjct: 752 LIKERQDAV-AILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYED 811
Query: 284 NAKKS-QNLISSIILLKTALEALPLLSKVLKEAKSFLLENIYKSVCENEKFATIRKRIGE 343
AKK Q IS++ +T EA L +LK S L ++ ++ K +
Sbjct: 812 TAKKQVQEFISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKD 871
Query: 344 VIDEDVLHARVPFIARTQQCFAVKAGIDGLLDIARRTFCDTSEAIHNLANKY-REEYKL- 403
D H I G D D A C T E + K+ +E+ KL
Sbjct: 872 AFDWVEAHNSGRVIPH--------EGADEEYDCA----CKTVEEFESSLKKHLKEQRKLL 931
Query: 404 --PNLKLPFNNRQGFYLSIPHKDVQGKLPSKFIQVLKHGNNIRCSTLELASLNVRNKSAA 463
++ + + L +P + + G +P + R T + L A
Sbjct: 932 GDASINYVTVGKDEYLLEVP-ESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAK 991
Query: 464 GECYIRTQICLEGLVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTISTKPVH-RYTRPNF 523
E + + L+ E L LD++++ + S + V R
Sbjct: 992 SEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISGS 1051
Query: 524 TDNGPMAIEAA--RHPIL--ESI-HNDFVANSIFL--SEASNVIIVMGPNMSGKSTYLQQ 583
T +G + A HP+L +S+ FV N++ + +E ++ I++ GPNM GKST L+Q
Sbjct: 1052 TSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQ 1111
Query: 584 MCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSLESNSSTFMTEMKETAFVMQNVSQ 643
+CL VILAQIG VPA + VD+I RMG D + + STF+TE+ ETA ++ + ++
Sbjct: 1112 VCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATR 1171
Query: 644 RSLVVVDELGRATSSSDGFAIAWSCCEHLL-SLKAYTIFATHMEGLSELATIYPNVKILH 703
SLVV+DELGR T++SDG AIA S EH + ++ F+TH LS P V + H
Sbjct: 1172 NSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNPKVSLCH 1231
Query: 704 FHVDIRN-----NRLDFKFQLKDGIRHVPHYGLLLAEVAGLPSSVIETA 729
I + F ++L G YG+ +A +AGLP V++ A
Sbjct: 1232 MACQIGEGIGGVEEVTFLYRLTPG-ACPKSYGVNVARLAGLPDYVLQRA 1260
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038907062.1 | 0.0e+00 | 96.84 | DNA mismatch repair protein MSH4 isoform X1 [Benincasa hispida] | [more] |
XP_038907063.1 | 0.0e+00 | 96.72 | DNA mismatch repair protein MSH4 isoform X2 [Benincasa hispida] | [more] |
XP_008437055.1 | 0.0e+00 | 96.21 | PREDICTED: DNA mismatch repair protein MSH4 [Cucumis melo] >KAA0039729.1 DNA mis... | [more] |
XP_022996171.1 | 0.0e+00 | 95.58 | DNA mismatch repair protein MSH4 [Cucurbita maxima] | [more] |
XP_023521478.1 | 0.0e+00 | 95.20 | DNA mismatch repair protein MSH4-like [Cucurbita pepo subsp. pepo] >XP_023532701... | [more] |
Match Name | E-value | Identity | Description | |
F4JP48 | 0.0e+00 | 80.18 | DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=2 SV... | [more] |
O15457 | 2.7e-125 | 36.11 | MutS protein homolog 4 OS=Homo sapiens OX=9606 GN=MSH4 PE=1 SV=2 | [more] |
Q99MT2 | 6.6e-124 | 35.98 | MutS protein homolog 4 OS=Mus musculus OX=10090 GN=Msh4 PE=2 SV=1 | [more] |
P40965 | 1.1e-70 | 29.39 | MutS protein homolog 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ... | [more] |
O94065 | 1.2e-64 | 28.25 | MutS protein homolog 4 OS=Candida albicans OX=5476 GN=MSH4 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TER1 | 0.0e+00 | 96.21 | DNA mismatch repair protein MSH4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
A0A1S3ATN6 | 0.0e+00 | 96.21 | DNA mismatch repair protein MSH4 OS=Cucumis melo OX=3656 GN=LOC103482597 PE=4 SV... | [more] |
A0A6J1K3Y6 | 0.0e+00 | 95.58 | DNA mismatch repair protein MSH4 OS=Cucurbita maxima OX=3661 GN=LOC111491480 PE=... | [more] |
A0A6J1H107 | 0.0e+00 | 94.95 | DNA mismatch repair protein MSH4 OS=Cucurbita moschata OX=3662 GN=LOC111459167 P... | [more] |
A0A6J1DNB3 | 0.0e+00 | 94.96 | DNA mismatch repair protein MSH4 OS=Momordica charantia OX=3673 GN=LOC111021986 ... | [more] |