HG10008878 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACATCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGCCGTGAGGTGCTTGGGTGGAAATATGAGAGGGCATATGAGGCATCGCAGAAGTACAAAGAAGGGAAGTTCATTCTTGAAAAGTCAAAAATCGTTAGGGACAACTGGTAG ATGAACATCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGCCGTGAGGTGCTTGGGTGGAAATATGAGAGGGCATATGAGGCATCGCAGAAGTACAAAGAAGGGAAGTTCATTCTTGAAAAGTCAAAAATCGTTAGGGACAACTGGTAG ATGAACATCACAGTGGGACCAAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCTGATGTGCATTGTGTTGACTGCCGTGAGGTGCTTGGGTGGAAATATGAGAGGGCATATGAGGCATCGCAGAAGTACAAAGAAGGGAAGTTCATTCTTGAAAAGTCAAAAATCGTTAGGGACAACTGGTAG MNITVGPKEDRHLMTGLHTVADVHCVDCREVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW Homology
BLAST of HG10008878 vs. NCBI nr
Match: KAG6579310.1 (Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of HG10008878 vs. NCBI nr
Match: XP_022922143.1 (protein yippee-like At4g27745 [Cucurbita moschata] >XP_022922144.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022922145.1 protein yippee-like At4g27745 [Cucurbita moschata] >XP_022974360.1 protein yippee-like At4g27745 isoform X1 [Cucurbita maxima] >XP_022974361.1 protein yippee-like At4g27745 isoform X1 [Cucurbita maxima] >XP_022974362.1 protein yippee-like At4g27745 isoform X1 [Cucurbita maxima] >XP_022996191.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996192.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996193.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996194.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996195.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996196.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996198.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996199.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996200.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996201.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_022996202.1 protein yippee-like At4g27745 [Cucurbita maxima] >XP_023532434.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532435.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532436.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532437.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532438.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532439.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532440.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532441.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532442.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532443.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532445.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023532446.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo] >XP_023549564.1 protein yippee-like At4g27745 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549565.1 protein yippee-like At4g27745 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549566.1 protein yippee-like At4g27745 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7016809.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of HG10008878 vs. NCBI nr
Match: XP_004145943.1 (protein yippee-like At4g27745 isoform X3 [Cucumis sativus] >XP_008437624.1 PREDICTED: protein yippee-like At4g27745 isoform X1 [Cucumis melo] >XP_011654604.1 protein yippee-like At4g27745 isoform X3 [Cucumis sativus] >XP_016898814.1 PREDICTED: protein yippee-like At4g27745 isoform X1 [Cucumis melo] >XP_038876277.1 protein yippee-like At4g27745 [Benincasa hispida] >XP_038876278.1 protein yippee-like At4g27745 [Benincasa hispida] >XP_038876279.1 protein yippee-like At4g27745 [Benincasa hispida] >XP_038876280.1 protein yippee-like At4g27745 [Benincasa hispida] >KAA0042536.1 protein yippee-like [Cucumis melo var. makuwa] >KGN49846.1 hypothetical protein Csa_000292 [Cucumis sativus] >TYK05939.1 protein yippee-like [Cucumis melo var. makuwa]) HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of HG10008878 vs. NCBI nr
Match: XP_031741334.1 (protein yippee-like At4g27745 isoform X1 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of HG10008878 vs. NCBI nr
Match: XP_031741335.1 (protein yippee-like At4g27745 isoform X2 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 2.3e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of HG10008878 vs. ExPASy Swiss-Prot
Match: Q9T096 (Protein yippee-like At4g27745 OS=Arabidopsis thaliana OX=3702 GN=At4g27745 PE=3 SV=2) HSP 1 Score: 115.5 bits (288), Expect = 2.1e-25 Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 0
BLAST of HG10008878 vs. ExPASy Swiss-Prot
Match: Q8S5M8 (Putative yippee-like protein Os10g0369500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0369500 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.3e-19 Identity = 38/61 (62.30%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of HG10008878 vs. ExPASy Swiss-Prot
Match: A6QPH8 (Protein yippee-like 3 OS=Bos taurus OX=9913 GN=YPEL3 PE=3 SV=2) HSP 1 Score: 91.7 bits (226), Expect = 3.3e-18 Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of HG10008878 vs. ExPASy Swiss-Prot
Match: Q65Z57 (Protein yippee-like 3 OS=Chlorocebus aethiops OX=9534 GN=YPEL3 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.3e-18 Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of HG10008878 vs. ExPASy Swiss-Prot
Match: P61236 (Protein yippee-like 3 OS=Homo sapiens OX=9606 GN=YPEL3 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.3e-18 Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of HG10008878 vs. ExPASy TrEMBL
Match: A0A6J1IDS0 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111472989 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of HG10008878 vs. ExPASy TrEMBL
Match: A0A6J1KA57 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111491497 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of HG10008878 vs. ExPASy TrEMBL
Match: A0A1S3AUL4 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103482979 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of HG10008878 vs. ExPASy TrEMBL
Match: A0A6J1E2J3 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111430209 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of HG10008878 vs. ExPASy TrEMBL
Match: A0A5A7TKR3 (Protein yippee-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00320 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of HG10008878 vs. TAIR 10
Match: AT4G27745.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 115.5 bits (288), Expect = 1.5e-26 Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 0
BLAST of HG10008878 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 86.7 bits (213), Expect = 7.5e-18 Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of HG10008878 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein ) HSP 1 Score: 86.7 bits (213), Expect = 7.5e-18 Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of HG10008878 vs. TAIR 10
Match: AT5G53940.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 82.0 bits (201), Expect = 1.8e-16 Identity = 33/59 (55.93%), Postives = 49/59 (83.05%), Query Frame = 0
BLAST of HG10008878 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 81.6 bits (200), Expect = 2.4e-16 Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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