HG10008598 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008598
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transcription factor TCP14-like
Location	Chr10: 24470714 .. 24471442 (+)
RNA-Seq Expression	HG10008598
Synteny	HG10008598

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGTCCCTTCACAGCTCCGATCCTCCTCTTATTACAACCCGAATTTCTCCCTTCATCAACAACGCAGAACCCTCTTCCCGGGATTCGGCCTCTCATCGGAAACGTCCTCCACCGCCCTCCTCAATTTCCAGTCCACCAACATCGGAAACTCTCTGCTCCAAGCCAAACCCGAACTCAGAGACACTACCTCTTCATTAGACCTCTCCGAGGCGGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCGACGGAGCAGGAGTTGTCGTCGTCGTCCTCCCAGAATCAAATGGGAGGGTATCTGTTGCAGTCGAGTACAGGCACGATTCCGGCCAGCCACGGAGGAGCTCAGGTTCCGGCGAATTTTTGGATGCTTACGAATACGAATAACCAAGTGATGGGGGGTGATCCAATATGGACGTTTCCGTCGGTTAATAACAGCGGTTTGTACAGAGGAACGATGTCGAGTGGGTTACATTTCATGAACTTCCCGGCACCGGTGGCGTTGGTTCCGGGTCAGCAATTCGGGTCCGGCACCGGCGGAGGGAATAATAGTTCCAGTGAGGGACACTTGAATATACTTGCAGGGCTAAATCCGTATCGATCGGTGTCAAACTCCGGCGTAATGGAACCACAAGGAAGTGGGTCACACTCACATCACGGCGGCGGTGGAAGTAACGGCGGTGGGGATGATCGGCATGATACAGCCAGCCATCACTCGTAG

mRNA sequence

ATGTCCGTCCCTTCACAGCTCCGATCCTCCTCTTATTACAACCCGAATTTCTCCCTTCATCAACAACGCAGAACCCTCTTCCCGGGATTCGGCCTCTCATCGGAAACGTCCTCCACCGCCCTCCTCAATTTCCAGTCCACCAACATCGGAAACTCTCTGCTCCAAGCCAAACCCGAACTCAGAGACACTACCTCTTCATTAGACCTCTCCGAGGCGGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCGACGGAGCAGGAGTTGTCGTCGTCGTCCTCCCAGAATCAAATGGGAGGGTATCTGTTGCAGTCGAGTACAGGCACGATTCCGGCCAGCCACGGAGGAGCTCAGGTTCCGGCGAATTTTTGGATGCTTACGAATACGAATAACCAAGTGATGGGGGGTGATCCAATATGGACGTTTCCGTCGGTTAATAACAGCGGTTTGTACAGAGGAACGATGTCGAGTGGGTTACATTTCATGAACTTCCCGGCACCGGTGGCGTTGGTTCCGGGTCAGCAATTCGGGTCCGGCACCGGCGGAGGGAATAATAGTTCCAGTGAGGGACACTTGAATATACTTGCAGGGCTAAATCCGTATCGATCGGTGTCAAACTCCGGCGTAATGGAACCACAAGGAAGTGGGTCACACTCACATCACGGCGGCGGTGGAAGTAACGGCGGTGGGGATGATCGGCATGATACAGCCAGCCATCACTCGTAG

Coding sequence (CDS)

ATGTCCGTCCCTTCACAGCTCCGATCCTCCTCTTATTACAACCCGAATTTCTCCCTTCATCAACAACGCAGAACCCTCTTCCCGGGATTCGGCCTCTCATCGGAAACGTCCTCCACCGCCCTCCTCAATTTCCAGTCCACCAACATCGGAAACTCTCTGCTCCAAGCCAAACCCGAACTCAGAGACACTACCTCTTCATTAGACCTCTCCGAGGCGGCGGAGGAAATCAGCATAGGGCGGAAGAGAAGACCGTCGACGGAGCAGGAGTTGTCGTCGTCGTCCTCCCAGAATCAAATGGGAGGGTATCTGTTGCAGTCGAGTACAGGCACGATTCCGGCCAGCCACGGAGGAGCTCAGGTTCCGGCGAATTTTTGGATGCTTACGAATACGAATAACCAAGTGATGGGGGGTGATCCAATATGGACGTTTCCGTCGGTTAATAACAGCGGTTTGTACAGAGGAACGATGTCGAGTGGGTTACATTTCATGAACTTCCCGGCACCGGTGGCGTTGGTTCCGGGTCAGCAATTCGGGTCCGGCACCGGCGGAGGGAATAATAGTTCCAGTGAGGGACACTTGAATATACTTGCAGGGCTAAATCCGTATCGATCGGTGTCAAACTCCGGCGTAATGGAACCACAAGGAAGTGGGTCACACTCACATCACGGCGGCGGTGGAAGTAACGGCGGTGGGGATGATCGGCATGATACAGCCAGCCATCACTCGTAG

Protein sequence

MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTALLNFQSTNIGNSLLQAKPELRDTTSSLDLSEAAEEISIGRKRRPSTEQELSSSSSQNQMGGYLLQSSTGTIPASHGGAQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGSGTGGGNNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGGGDDRHDTASHHS

Homology

[Close]

BLAST of HG10008598 vs. NCBI nr
Match: XP_038879801.1 (transcription factor TCP14 [Benincasa hispida])

HSP 1 Score: 441.4 bits (1134), Expect = 4.9e-120
Identity = 226/234 (96.58%), Postives = 231/234 (98.72%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTALLNFQSTNIGNSLLQAKPEL 60
           +SVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTALLNFQSTNIGNSLLQAKPEL
Sbjct: 159 LSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTALLNFQSTNIGNSLLQAKPEL 218

Query: 61  RDTTSSLDLSEAAEEISIGRKRRPSTEQELSSSSSQNQMGGYLLQSSTGTIPASHGGAQV 120
           RDTTSS DLSEAAEEISIGRKRRPSTEQELSSSSSQ+QMGGYLLQ+S GTIPASHGGAQV
Sbjct: 219 RDTTSSFDLSEAAEEISIGRKRRPSTEQELSSSSSQHQMGGYLLQTSAGTIPASHGGAQV 278

Query: 121 PANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGSG 180
           PANFWMLTN NNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGSG
Sbjct: 279 PANFWMLTNPNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGSG 338

Query: 181 TGGGNNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGGGDDR 235
           TGGGNNSSSEGHLNILAGLNPYRSVS+SGV+EPQGSGSHSHHGGGGSNGGGDDR
Sbjct: 339 TGGGNNSSSEGHLNILAGLNPYRSVSSSGVLEPQGSGSHSHHGGGGSNGGGDDR 392

[Close]

BLAST of HG10008598 vs. NCBI nr
Match: XP_004138164.2 (transcription factor TCP14 [Cucumis sativus] >KAE8652415.1 hypothetical protein Csa_013205 [Cucumis sativus])

HSP 1 Score: 429.5 bits (1103), Expect = 1.9e-116
Identity = 230/252 (91.27%), Postives = 234/252 (92.86%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST-ALLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST ALLNFQSTNIGNSLLQAKPE
Sbjct: 169 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 228

Query: 61  LRDTTSSLDLSEAAEEISIGRKRRPSTEQELSSSSSQNQMGGYLLQSSTGTIPASHGGAQ 120
           +RDT SSLDLS+AAEEISIGRKRRPSTEQELSSSSSQ+QMG YLLQSSTGTIPASHGGAQ
Sbjct: 229 IRDTPSSLDLSDAAEEISIGRKRRPSTEQELSSSSSQHQMGSYLLQSSTGTIPASHGGAQ 288

Query: 121 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 180
           VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS
Sbjct: 289 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 348

Query: 181 GTGGG---------NNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGG 240
           GTGGG         NNSSSEGHLNILAGLNPYRSVS+SGVMEPQGSGS SHHGGG   GG
Sbjct: 349 GTGGGSNNNNNNNNNNSSSEGHLNILAGLNPYRSVSSSGVMEPQGSGSQSHHGGG---GG 408

Query: 241 GDDRHDTASHHS 243
           GDDRHDT SH S
Sbjct: 409 GDDRHDTTSHQS 417

[Close]

BLAST of HG10008598 vs. NCBI nr
Match: XP_022987192.1 (transcription factor TCP14-like [Cucurbita maxima])

HSP 1 Score: 426.0 bits (1094), Expect = 2.1e-115
Identity = 222/243 (91.36%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE+SSTALLNFQS+NIGNSLLQAKPEL
Sbjct: 162 MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSESSSTALLNFQSSNIGNSLLQAKPEL 221

Query: 61  RD-TTSSLDLSEAAEEISIGRKRRPSTEQELSSSSSQNQMGGYLLQSSTGTIPASHGGAQ 120
           RD TTSSLDLS+AAEEISIGRKRRPSTEQELSSSSSQ+QMGGYLLQSS G+IPASHGG Q
Sbjct: 222 RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSQHQMGGYLLQSSAGSIPASHGGGQ 281

Query: 121 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 180
           VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS
Sbjct: 282 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 341

Query: 181 GTGGGNNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGGGDDRHDTAS 240
           G GGGNNSSSEGHLNILAGLNPYRSVS +G+ME QGSGSHSHHG     GGGDDRHD+ S
Sbjct: 342 GAGGGNNSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHG-----GGGDDRHDSTS 399

Query: 241 HHS 243
           HHS
Sbjct: 402 HHS 399

[Close]

BLAST of HG10008598 vs. NCBI nr
Match: XP_008453196.1 (PREDICTED: transcription factor TCP14 [Cucumis melo])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 226/251 (90.04%), Postives = 232/251 (92.43%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST-ALLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST ALLNFQSTNIGNSLLQAKPE
Sbjct: 164 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 223

Query: 61  LRDTTSSLDLSEAAEEISIGRKRRPSTEQELSSSSSQNQMGGYLLQSSTGTIPASHGGAQ 120
           +RDT SSLDLS+AAEEISIGRKRRPSTEQELSSSSSQ+QMGGYLLQSSTGTIPASHGGAQ
Sbjct: 224 IRDTPSSLDLSDAAEEISIGRKRRPSTEQELSSSSSQHQMGGYLLQSSTGTIPASHGGAQ 283

Query: 121 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 180
           VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS
Sbjct: 284 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 343

Query: 181 GTGGG--------NNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGGG 240
            TGGG        N+SS+EGHLNILAGLNPYRSVSN+GVMEPQGSGS SHHG     GGG
Sbjct: 344 STGGGSNNNNNNNNSSSTEGHLNILAGLNPYRSVSNTGVMEPQGSGSQSHHG-----GGG 403

Query: 241 DDRHDTASHHS 243
           DDRHDT SH S
Sbjct: 404 DDRHDTTSHQS 409

[Close]

BLAST of HG10008598 vs. NCBI nr
Match: KAA0034839.1 (transcription factor TCP14 [Cucumis melo var. makuwa] >TYJ98624.1 transcription factor TCP14 [Cucumis melo var. makuwa])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 226/251 (90.04%), Postives = 232/251 (92.43%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST-ALLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST ALLNFQSTNIGNSLLQAKPE
Sbjct: 164 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 223

Query: 61  LRDTTSSLDLSEAAEEISIGRKRRPSTEQELSSSSSQNQMGGYLLQSSTGTIPASHGGAQ 120
           +RDT SSLDLS+AAEEISIGRKRRPSTEQELSSSSSQ+QMGGYLLQSSTGTIPASHGGAQ
Sbjct: 224 IRDTPSSLDLSDAAEEISIGRKRRPSTEQELSSSSSQHQMGGYLLQSSTGTIPASHGGAQ 283

Query: 121 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 180
           VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS
Sbjct: 284 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 343

Query: 181 GTGGG--------NNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGGG 240
            TGGG        N+SS+EGHLNILAGLNPYRSVSN+GVMEPQGSGS SHHG     GGG
Sbjct: 344 STGGGSNNNNNNNNSSSTEGHLNILAGLNPYRSVSNTGVMEPQGSGSQSHHG-----GGG 403

Query: 241 DDRHDTASHHS 243
           DDRHDT SH S
Sbjct: 404 DDRHDTTSHQS 409

[Close]

BLAST of HG10008598 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14
Identity = 76/265 (28.68%), Postives = 114/265 (43.02%), Query Frame = 0


Query: 12  YYNPNFSLHQQRRTLFPGFGLSSETSSTALLNFQSTNIGNSLLQAKPELRDTTSSLDLSE 71
           +++P+        +LFP  G+ + T +T+ LNF +                  +  +  +
Sbjct: 233 FHHPHLQGRAPTSSLFP--GIDNFTPTTSFLNFHN-----------------PTKQEGDQ 292

Query: 72  AAEEISIGRKRRPSTEQELSSSSSQ---NQMGGYLLQSS-TGTIPASHGGAQVPANFWML 131
            +EE++  +KRR  T  +L     Q   +Q+GGY LQSS +G+   +    Q+P NFWM+
Sbjct: 293 DSEELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNSGSTATAAAAQQIPGNFWMV 352

Query: 132 T---------NTNNQV------------MGGDPIWTFPSVNN----------SGLYRGTM 191
                       NNQ              GG+P+WTFPS+N           SG+  G +
Sbjct: 353 AAAAAAGGGGGNNNQTGGLMTASIGTGGGGGEPVWTFPSINTAAAALYRSGVSGVPSGAV 412

Query: 192 SSGLHFMNFPAPVALVPGQQFGSGTGGGNNSSSEGHLNILAGLNPYRSVSNSGVMEPQGS 242
           SSGLHFMNF AP+A + GQQ                           + SN  + E    
Sbjct: 413 SSGLHFMNFAAPMAFLTGQQ------------------------QLATTSNHEINE---- 448

[Close]

BLAST of HG10008598 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.7e-11
Identity = 81/243 (33.33%), Postives = 105/243 (43.21%), Query Frame = 0


Query: 32  LSSETSSTALLNFQSTNI----GNSLLQAKPELRDTTSSLDL----SEAAEEISIGRKRR 91
           +++  + T   NF S NI      S L A   LR T SS             +    + R
Sbjct: 104 IAATGTGTIPANFTSLNISLRSSRSSLSA-AHLRTTPSSYYFHSPHQSMTHHLQHQHQVR 163

Query: 92  PSTEQELSSSSS-----QNQMGGYLLQSSTGTIPASHGGAQVPANFWML-TNTNNQVMGG 151
           P  E   SSSSS      NQMG YL+QS+ G++P S   A  P  FW    NT N     
Sbjct: 164 PKNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQSPATAP--FWSSGDNTQN----- 223

Query: 152 DPIWTFP-SVNNSGLYRGTM----------SSGLHFMNFPAPVALVPGQQFGSGTGGGNN 211
             +W F  + ++SG+  G +           SG+H MNF AP+AL  GQ   SG GGG  
Sbjct: 224 --LWAFNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALFSGQPLASGYGGGGG 283

Query: 212 SSSE-GHLNILAGLN-PYRSVSNSGVMEPQGSGSHSHHGGGGSNGGGDDRHD-----TAS 243
              E  H  +LA LN  YR V+ +G           +H     N  GD  H+     + S
Sbjct: 284 GGGEHSHYGVLAALNAAYRPVAETG-----------NHNNNQQNRDGDHHHNHQEDGSTS 325

[Close]

BLAST of HG10008598 vs. ExPASy TrEMBL
Match: A0A0A0LRN4 (Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G009680 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 9.4e-117
Identity = 230/252 (91.27%), Postives = 234/252 (92.86%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST-ALLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST ALLNFQSTNIGNSLLQAKPE
Sbjct: 63  MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 122

Query: 61  LRDTTSSLDLSEAAEEISIGRKRRPSTEQELSSSSSQNQMGGYLLQSSTGTIPASHGGAQ 120
           +RDT SSLDLS+AAEEISIGRKRRPSTEQELSSSSSQ+QMG YLLQSSTGTIPASHGGAQ
Sbjct: 123 IRDTPSSLDLSDAAEEISIGRKRRPSTEQELSSSSSQHQMGSYLLQSSTGTIPASHGGAQ 182

Query: 121 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 180
           VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS
Sbjct: 183 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 242

Query: 181 GTGGG---------NNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGG 240
           GTGGG         NNSSSEGHLNILAGLNPYRSVS+SGVMEPQGSGS SHHGGG   GG
Sbjct: 243 GTGGGSNNNNNNNNNNSSSEGHLNILAGLNPYRSVSSSGVMEPQGSGSQSHHGGG---GG 302

Query: 241 GDDRHDTASHHS 243
           GDDRHDT SH S
Sbjct: 303 GDDRHDTTSHQS 311

[Close]

BLAST of HG10008598 vs. ExPASy TrEMBL
Match: A0A6J1J9P7 (transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111484815 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.0e-115
Identity = 222/243 (91.36%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE+SSTALLNFQS+NIGNSLLQAKPEL
Sbjct: 162 MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSESSSTALLNFQSSNIGNSLLQAKPEL 221

Query: 61  RD-TTSSLDLSEAAEEISIGRKRRPSTEQELSSSSSQNQMGGYLLQSSTGTIPASHGGAQ 120
           RD TTSSLDLS+AAEEISIGRKRRPSTEQELSSSSSQ+QMGGYLLQSS G+IPASHGG Q
Sbjct: 222 RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSQHQMGGYLLQSSAGSIPASHGGGQ 281

Query: 121 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 180
           VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS
Sbjct: 282 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 341

Query: 181 GTGGGNNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGGGDDRHDTAS 240
           G GGGNNSSSEGHLNILAGLNPYRSVS +G+ME QGSGSHSHHG     GGGDDRHD+ S
Sbjct: 342 GAGGGNNSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHG-----GGGDDRHDSTS 399

Query: 241 HHS 243
           HHS
Sbjct: 402 HHS 399

[Close]

BLAST of HG10008598 vs. ExPASy TrEMBL
Match: A0A5A7T0G2 (Transcription factor TCP14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002480 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.2e-115
Identity = 226/251 (90.04%), Postives = 232/251 (92.43%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST-ALLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST ALLNFQSTNIGNSLLQAKPE
Sbjct: 164 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 223

Query: 61  LRDTTSSLDLSEAAEEISIGRKRRPSTEQELSSSSSQNQMGGYLLQSSTGTIPASHGGAQ 120
           +RDT SSLDLS+AAEEISIGRKRRPSTEQELSSSSSQ+QMGGYLLQSSTGTIPASHGGAQ
Sbjct: 224 IRDTPSSLDLSDAAEEISIGRKRRPSTEQELSSSSSQHQMGGYLLQSSTGTIPASHGGAQ 283

Query: 121 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 180
           VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS
Sbjct: 284 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 343

Query: 181 GTGGG--------NNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGGG 240
            TGGG        N+SS+EGHLNILAGLNPYRSVSN+GVMEPQGSGS SHHG     GGG
Sbjct: 344 STGGGSNNNNNNNNSSSTEGHLNILAGLNPYRSVSNTGVMEPQGSGSQSHHG-----GGG 403

Query: 241 DDRHDTASHHS 243
           DDRHDT SH S
Sbjct: 404 DDRHDTTSHQS 409

[Close]

BLAST of HG10008598 vs. ExPASy TrEMBL
Match: A0A1S3BVN4 (transcription factor TCP14 OS=Cucumis melo OX=3656 GN=LOC103493985 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.2e-115
Identity = 226/251 (90.04%), Postives = 232/251 (92.43%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST-ALLNFQSTNIGNSLLQAKPE 60
           MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSST ALLNFQSTNIGNSLLQAKPE
Sbjct: 164 MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPE 223

Query: 61  LRDTTSSLDLSEAAEEISIGRKRRPSTEQELSSSSSQNQMGGYLLQSSTGTIPASHGGAQ 120
           +RDT SSLDLS+AAEEISIGRKRRPSTEQELSSSSSQ+QMGGYLLQSSTGTIPASHGGAQ
Sbjct: 224 IRDTPSSLDLSDAAEEISIGRKRRPSTEQELSSSSSQHQMGGYLLQSSTGTIPASHGGAQ 283

Query: 121 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 180
           VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS
Sbjct: 284 VPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGS 343

Query: 181 GTGGG--------NNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGGG 240
            TGGG        N+SS+EGHLNILAGLNPYRSVSN+GVMEPQGSGS SHHG     GGG
Sbjct: 344 STGGGSNNNNNNNNSSSTEGHLNILAGLNPYRSVSNTGVMEPQGSGSQSHHG-----GGG 403

Query: 241 DDRHDTASHHS 243
           DDRHDT SH S
Sbjct: 404 DDRHDTTSHQS 409

[Close]

BLAST of HG10008598 vs. ExPASy TrEMBL
Match: A0A6J1E3T0 (transcription factor TCP14-like OS=Cucurbita moschata OX=3662 GN=LOC111429686 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.5e-114
Identity = 223/244 (91.39%), Postives = 229/244 (93.85%), Query Frame = 0


Query: 1   MSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTALLNFQSTNIGNSLLQAKPEL 60
           MSVPSQLRSSSYYNPNFSLHQ RRTLFPGFGLSSE SSTALLNFQSTNIGNSLLQAKPEL
Sbjct: 151 MSVPSQLRSSSYYNPNFSLHQPRRTLFPGFGLSSEPSSTALLNFQSTNIGNSLLQAKPEL 210

Query: 61  RD-TTSSLDLSEAAEEISIGRKRRPSTEQEL-SSSSSQNQMGGYLLQSSTGTIPASHGGA 120
           RD TTSSLDLS+AAEEISIGRKRRPSTEQEL SSSSSQ+QMGGYLLQSS G+IPASHGG 
Sbjct: 211 RDNTTSSLDLSDAAEEISIGRKRRPSTEQELSSSSSSQHQMGGYLLQSSAGSIPASHGGG 270

Query: 121 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 180
           QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG
Sbjct: 271 QVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFG 330

Query: 181 SGTGGGNNSSSEGHLNILAGLNPYRSVSNSGVMEPQGSGSHSHHGGGGSNGGGDDRHDTA 240
           SG GGGNNSSSEGHLNILAGLNPYRSVS +G+ME QGSGSHSHHG     GGGDDRHD+ 
Sbjct: 331 SGAGGGNNSSSEGHLNILAGLNPYRSVSTTGIMEQQGSGSHSHHG-----GGGDDRHDST 389

Query: 241 SHHS 243
           SHHS
Sbjct: 391 SHHS 389

[Close]

BLAST of HG10008598 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 82.0 bits (201), Expect = 7.1e-16
Identity = 76/265 (28.68%), Postives = 114/265 (43.02%), Query Frame = 0


Query: 12  YYNPNFSLHQQRRTLFPGFGLSSETSSTALLNFQSTNIGNSLLQAKPELRDTTSSLDLSE 71
           +++P+        +LFP  G+ + T +T+ LNF +                  +  +  +
Sbjct: 233 FHHPHLQGRAPTSSLFP--GIDNFTPTTSFLNFHN-----------------PTKQEGDQ 292

Query: 72  AAEEISIGRKRRPSTEQELSSSSSQ---NQMGGYLLQSS-TGTIPASHGGAQVPANFWML 131
            +EE++  +KRR  T  +L     Q   +Q+GGY LQSS +G+   +    Q+P NFWM+
Sbjct: 293 DSEELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNSGSTATAAAAQQIPGNFWMV 352

Query: 132 T---------NTNNQV------------MGGDPIWTFPSVNN----------SGLYRGTM 191
                       NNQ              GG+P+WTFPS+N           SG+  G +
Sbjct: 353 AAAAAAGGGGGNNNQTGGLMTASIGTGGGGGEPVWTFPSINTAAAALYRSGVSGVPSGAV 412

Query: 192 SSGLHFMNFPAPVALVPGQQFGSGTGGGNNSSSEGHLNILAGLNPYRSVSNSGVMEPQGS 242
           SSGLHFMNF AP+A + GQQ                           + SN  + E    
Sbjct: 413 SSGLHFMNFAAPMAFLTGQQ------------------------QLATTSNHEINE---- 448

[Close]

BLAST of HG10008598 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 68.9 bits (167), Expect = 6.2e-12
Identity = 81/243 (33.33%), Postives = 105/243 (43.21%), Query Frame = 0


Query: 32  LSSETSSTALLNFQSTNI----GNSLLQAKPELRDTTSSLDL----SEAAEEISIGRKRR 91
           +++  + T   NF S NI      S L A   LR T SS             +    + R
Sbjct: 104 IAATGTGTIPANFTSLNISLRSSRSSLSA-AHLRTTPSSYYFHSPHQSMTHHLQHQHQVR 163

Query: 92  PSTEQELSSSSS-----QNQMGGYLLQSSTGTIPASHGGAQVPANFWML-TNTNNQVMGG 151
           P  E   SSSSS      NQMG YL+QS+ G++P S   A  P  FW    NT N     
Sbjct: 164 PKNESHSSSSSSSQLLDHNQMGNYLVQSTAGSLPTSQSPATAP--FWSSGDNTQN----- 223

Query: 152 DPIWTFP-SVNNSGLYRGTM----------SSGLHFMNFPAPVALVPGQQFGSGTGGGNN 211
             +W F  + ++SG+  G +           SG+H MNF AP+AL  GQ   SG GGG  
Sbjct: 224 --LWAFNINPHHSGVVAGDVYNPNSGGSGGGSGVHLMNFAAPIALFSGQPLASGYGGGGG 283

Query: 212 SSSE-GHLNILAGLN-PYRSVSNSGVMEPQGSGSHSHHGGGGSNGGGDDRHD-----TAS 243
              E  H  +LA LN  YR V+ +G           +H     N  GD  H+     + S
Sbjct: 284 GGGEHSHYGVLAALNAAYRPVAETG-----------NHNNNQQNRDGDHHHNHQEDGSTS 325

The following BLAST results are available for this feature:

BLAST of HG10008598 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879801.1	4.9e-120	96.58	transcription factor TCP14 [Benincasa hispida]	[more]
XP_004138164.2	1.9e-116	91.27	transcription factor TCP14 [Cucumis sativus] >KAE8652415.1 hypothetical protein ...	[more]
XP_022987192.1	2.1e-115	91.36	transcription factor TCP14-like [Cucurbita maxima]	[more]
XP_008453196.1	1.1e-114	90.04	PREDICTED: transcription factor TCP14 [Cucumis melo]	[more]
KAA0034839.1	1.1e-114	90.04	transcription factor TCP14 [Cucumis melo var. makuwa] >TYJ98624.1 transcription ...	[more]

BLAST of HG10008598 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z00	1.0e-14	28.68	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9C9L2	8.7e-11	33.33	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]

BLAST of HG10008598 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRN4	9.4e-117	91.27	Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G009680 PE=4 SV=1	[more]
A0A6J1J9P7	1.0e-115	91.36	transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111484815 PE=4...	[more]
A0A5A7T0G2	5.2e-115	90.04	Transcription factor TCP14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BVN4	5.2e-115	90.04	transcription factor TCP14 OS=Cucumis melo OX=3656 GN=LOC103493985 PE=4 SV=1	[more]
A0A6J1E3T0	1.5e-114	91.39	transcription factor TCP14-like OS=Cucurbita moschata OX=3662 GN=LOC111429686 PE...	[more]

BLAST of HG10008598 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47620.1	7.1e-16	28.68	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G69690.1	6.2e-12	33.33	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..223
None	No IPR available	PANTHER	PTHR31072:SF174	TRANSCRIPTION FACTOR TCP14-LIKE	coord: 1..241
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 1..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008598.1	HG10008598.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding