HG10007740 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGGAGATTTACAAATTTATGAGGCCAACCTAACTCGAAGCTTAGACATCAGACTTGGCAGTTACTCCATCGTCTGTCAAATCATGATAACTCTGCTTGGGTTGTGGGAGGCGATCTTAATGAGATCTTATGGATGGTGGAAAAAGAAGGTGGCTTTCAGCGGGATGAGTCTCTTATGGCCAATTTTCGCTCAACACTGGATGACTGTTCACTCCAAGACCTTGGCTTTCAAGGAGATAAATTTACTTGGTGTAATAGATGGGATCATCCCCATTAGGTGAGTCTTCATCTTTATAGGTTTCTCACTAATATTGAATTTATGTCTCTTTTTTCAGATCACGGAGTGTACAATCATAAGTGGGCCAAATCTAATCATAGACACATTGAATTGTCTCTTGGTATCTTCTTATTCGCGAAGTGGGGGGCACAAATTTTGACCTTTTCGTTTCAATGAAAATTGGTCTTTGCATGAGTATTGCAGGAAAATTGTGAGTGAATCTGTATATTGGGAGGGTGGTGTTTGTAACCCGACTACGAGAGATTTTAAGTTGGGGGTTTGTGCCATAAATTTGAAAAAGTGGGAAGGTGAAGTAATCAAAGGGCTTTTCCAAAATATCAAGAGGCTTCGTGCAGAAATTCAGGCAGTTTATGACAATCAGAATCTCATCAACTATAGTATTATTAGGGAGTTAGAAAAGAAGCTCCATTTGTTGCTTTTAGAGGAGGAGATTTATTGGATGCAGAGATCGAGGGAAAACTGGCTTTGGTGGGGGGACAGAAATACTCGCTGGTTTCACCAACAAGCATCACGCCATCATTGTAAAAATTATATCTGGGGCATTTTGAATAATGTTGGTGTGTGGACTGATGATGAAACTGTGGTTAGTAATACATTCCTTAACTGCTTTGAGAATATTTTTAATTCTTTGAATCCACCTGATGAAGCTATGAGTATGGTTCTTGAGGGTATTCAACTAATGGTGACTTCAACCATGAATGAATTTCTATGTTGACCGTTTATTACTGAGGAGGTGGAGAATGCTCTGAAATCGTGTCATCCCTCAAAAGCCCCTGGCCTTGACAGTTTTTCGACTGTTTTTTATAAAAAATATTGGGACATAGTGGGAAAGAGCATCACTAGATGTGCTCTAGCCATACTTAATCGCAAGGCTTCGATAAAAGACTGGAATAAGACCCATATAGCTCTCATCCCAAAGATCAATAACCCCAGGTCTATTTCTGAATTTCGCCCTATCAGTCTATGTAATGTCATATACAAATTGATCACTAAAACGATGACTGATAGACTTAAATTGGTCATGGAGGACATTATTTCTATTAACCAATCTGCCTTTGTGCCTGATCGTCTGATTAGTGATAATATCATTTTAAGCTATGAATGTTTAAATTACATAAGGAAAAAGAGAAAAGGGTATGTAGGTTATGCTGCATTGAAGATTGATATGAGTAAGGCGTATGATAGAGCCGAATGGAATTTTCTTAAGAAAATTCTAGTCAAGATGGGTTTCTATCAAGGTTGGGTTGAGCTGGTTATGGATTGTGTGACAATAGTTAATTTTTCCATTCTTATTAATGAGGTGGCTCATTGATCTATATGTCCTTCGAGACGTTTAAGGCAAGGTGACCCTCTTTCTCCTTATTTGTTTGTCATCTGTGCTAAAGGCCTTTCATATATGATTAAAAGGGAATATCCTAGAGGAAATTTGTCTAGTATGTCAATTTCTTGCCTTTGTGATCCTATTACTCACCTATTTTTTGTTGATGATAGCTTGATTTTCCTTAAAGCTAATGCTCAAGAATTTGGAGTTTTTAAGTTGATACTTCATACATATGAAAGAGCATTGGGGCAATGTGTTAATCTCTCCAAGTCAACAATGTTTTTATCCCCTAATGTTCAAGCAGATTGCAAAATTTTTCTGGAGAGTCTTATTAATGTGAAGGCATTTGAAAGGTTGGATTCTTATTTGGGTCTTCCCTCTATTCTTACTAAAAGGAAGATTGATGATTTTAAGGCCATTAAGGAGATGGTGTGGAAGGTCTTGCAAGGTTGGAAAAATAACATTTTCTTTGTTGGAGCAAAGGAAATCTTGATTAAGAGTATTGCCCAAGCTATTCCTACTTATGTGATGAGTTGTTTTCGTCTCCAAAAGGGTCTTTGCTGTGATATTATGAGGCTTTGTGCCAAATTTTGGTGGGGTTCAAGTGATGAAAAAAGAAAAATACATTTGATGAGATGGGATAAATTATGCTTTCCAAAAGAGTTGGGTGGTTTGAATTTCAAAGATATTGAATTATTTAACCAGGCTCTTCTTGCGAAACAAGCATGGAGGATTTTAAAGAACCCTCATTCGCTAGTTAGTAGGGTTTTGAAGGGGAGATATTTCCCATCTTGTTCTATTCTGGAGGCATCATGTTCAAGGTCAGACTCTTTCTTTTGGAATGGCCTATGCTAAGGGAAAGAAATACTGTTGAAAGGAGTTCGGAAGGCTATTGGTAATGGGAGATCAAATCTGGCTTTCATAGACCCTTGGATTCTCAAACCATCTACCTTCAAGGTTGGTACCCATAATGGTTTGAGTGAAAACAGATTGGTTGCCGATTTTATTTCTCCTTCTAGCGACTAGGATTTAAATAAGTTGCAATCGGCCTTTATTCAAGAAGACATCATGGAGATTCTTAAAAATCCCCCAGTAGGAGTAATAGGGAAGATATATGTATTTGGCATTTCAACAAGCATGGTGAATACTTAGTCAAGAGCGGTTATAGAAGTGCTATTTTCGATAGATTTATGAGAAATGGATCTAGGTTGGATCAATCATTTGGGTGGTGGAAGAGATTATGGGCTCTAAAAATTCATAGTTTGACAAACCTCAAGAAGCGGGGTATGGATGTTATTCCAGGTTGTTCGATTTGTAGAAGAAAAAAGGAAACTGTGACACATGCTTTGTTTGATTGTTCTAGGGCCAGGGTTGTGTGGTCTATCATTATTTAGTTGTAGTTGGCTATGGGAAGCTAGGAATAAGGATTGTTTGGATATCTGGATGGAGCTGGACAGAAGTTTCAATGACTTTGATCTAGCTTAGGCTTGCATTACCGCCTGGGCTATTTGGGGAGACATGAATAAAGTTCATAACTCGGAAGGTATCCCTTCTGTGGAGCATCGGTGTGAGTGGATTTTGGAGTATTCAAGGGAAGTTAGGGTGAAACTAAAAGAGCAATTTAGTTCTATTATTGGTTCAAAAATTTACGATATTAGTGCTTTGAACATCCTTCATGTTGATGCAGCATGTAGAATGGATTCCTCGGTGATGGGTTATGGTGGGGTTATTAGTTTCCTGTCTGGCTATTTGATGGCTGCTGTGCATGGTTTTCAAAAGATTTCTCGGAGTCCGTTGGGAGCTTAA ATGGGTGGAGATTTACAAATTTATGAGGCCAACCTAACTCGAAGCTTAGACATCAGACTTGGCAGTTACTCCATCGTCTGTCAAATCATGATAACTCTGCTTGGGTTGTGGGAGGCGATCTTAATGAGATCTTATGGATGGTGGAAAAAGAAGGTGGCTTTCAGCGGGATGAGTCTCTTATGGCCAATTTTCGCTCAACACTGGATGACTGTTCACTCCAAGACCTTGGCTTTCAAGGAGATAAATTTACTTGGTGTAATAGATGGGATCATCCCCATTAGGAGTAATAGGGAAGATATATGTATTTGGCATTTCAACAAGCATGGTGAATACTTAGTCAAGAGCGGTTATAGAAGTGCTATTTTCGATAGATTTATGAGAAATGGATCTAGGTTGGATCAATCATTTGGGTGGTGGAAGAGATTATGGGCTCTAAAAATTCATAGTTTGACAAACCTCAAGAAGCGGGGTATGGATGTTATTCCAGGTTGTTCGATTTGTAGAAGAAAAAAGGAAACTGTGACACATGCTTTGTTTGATTGTTCTAGGGCCAGGGTTGCTTGCATTACCGCCTGGGCTATTTGGGGAGACATGAATAAAGTTCATAACTCGGAAGGTATCCCTTCTGTGGAGCATCGGTGTGAGTGGATTTTGGAGTATTCAAGGGAAGTTAGGGTGAAACTAAAAGAGCAATTTAGTTCTATTATTGGTTCAAAAATTTACGATATTAGTGCTTTGAACATCCTTCATGTTGATGCAGCATGTAGAATGGATTCCTCGGTGATGGGTTATGGTGGGGTTATTAGTTTCCTGTCTGGCTATTTGATGGCTGCTGTGCATGGTTTTCAAAAGATTTCTCGGAGTCCGTTGGGAGCTTAA ATGGGTGGAGATTTACAAATTTATGAGGCCAACCTAACTCGAAGCTTAGACATCAGACTTGGCAGTTACTCCATCGTCTGTCAAATCATGATAACTCTGCTTGGGTTGTGGGAGGCGATCTTAATGAGATCTTATGGATGGTGGAAAAAGAAGGTGGCTTTCAGCGGGATGAGTCTCTTATGGCCAATTTTCGCTCAACACTGGATGACTGTTCACTCCAAGACCTTGGCTTTCAAGGAGATAAATTTACTTGGTGTAATAGATGGGATCATCCCCATTAGGAGTAATAGGGAAGATATATGTATTTGGCATTTCAACAAGCATGGTGAATACTTAGTCAAGAGCGGTTATAGAAGTGCTATTTTCGATAGATTTATGAGAAATGGATCTAGGTTGGATCAATCATTTGGGTGGTGGAAGAGATTATGGGCTCTAAAAATTCATAGTTTGACAAACCTCAAGAAGCGGGGTATGGATGTTATTCCAGGTTGTTCGATTTGTAGAAGAAAAAAGGAAACTGTGACACATGCTTTGTTTGATTGTTCTAGGGCCAGGGTTGCTTGCATTACCGCCTGGGCTATTTGGGGAGACATGAATAAAGTTCATAACTCGGAAGGTATCCCTTCTGTGGAGCATCGGTGTGAGTGGATTTTGGAGTATTCAAGGGAAGTTAGGGTGAAACTAAAAGAGCAATTTAGTTCTATTATTGGTTCAAAAATTTACGATATTAGTGCTTTGAACATCCTTCATGTTGATGCAGCATGTAGAATGGATTCCTCGGTGATGGGTTATGGTGGGGTTATTAGTTTCCTGTCTGGCTATTTGATGGCTGCTGTGCATGGTTTTCAAAAGATTTCTCGGAGTCCGTTGGGAGCTTAA MGGDLQIYEANLTRSLDIRLGSYSIVCQIMITLLGLWEAILMRSYGWWKKKVAFSGMSLLWPIFAQHWMTVHSKTLAFKEINLLGVIDGIIPIRSNREDICIWHFNKHGEYLVKSGYRSAIFDRFMRNGSRLDQSFGWWKRLWALKIHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRARVACITAWAIWGDMNKVHNSEGIPSVEHRCEWILEYSREVRVKLKEQFSSIIGSKIYDISALNILHVDAACRMDSSVMGYGGVISFLSGYLMAAVHGFQKISRSPLGA Homology
BLAST of HG10007740 vs. NCBI nr
Match: KAF4391976.1 (hypothetical protein F8388_004305 [Cannabis sativa]) HSP 1 Score: 86.3 bits (212), Expect = 4.9e-13 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 0
BLAST of HG10007740 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 84.7 bits (208), Expect = 1.4e-12 Identity = 66/263 (25.10%), Postives = 105/263 (39.92%), Query Frame = 0
BLAST of HG10007740 vs. NCBI nr
Match: KAF4367202.1 (hypothetical protein F8388_006510 [Cannabis sativa]) HSP 1 Score: 83.6 bits (205), Expect = 3.2e-12 Identity = 51/164 (31.10%), Postives = 80/164 (48.78%), Query Frame = 0
BLAST of HG10007740 vs. NCBI nr
Match: KAF4384439.1 (hypothetical protein G4B88_028513 [Cannabis sativa] >KAF4392273.1 hypothetical protein F8388_012729 [Cannabis sativa]) HSP 1 Score: 82.8 bits (203), Expect = 5.4e-12 Identity = 49/163 (30.06%), Postives = 78/163 (47.85%), Query Frame = 0
BLAST of HG10007740 vs. NCBI nr
Match: KAF4391669.1 (hypothetical protein F8388_005434 [Cannabis sativa] >KAF4400672.1 hypothetical protein G4B88_023080 [Cannabis sativa]) HSP 1 Score: 82.8 bits (203), Expect = 5.4e-12 Identity = 47/163 (28.83%), Postives = 80/163 (49.08%), Query Frame = 0
BLAST of HG10007740 vs. ExPASy TrEMBL
Match: A0A7J6H9M1 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_004305 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.4e-13 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 0
BLAST of HG10007740 vs. ExPASy TrEMBL
Match: A0A803PHH5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.2e-13 Identity = 49/163 (30.06%), Postives = 79/163 (48.47%), Query Frame = 0
BLAST of HG10007740 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.9e-13 Identity = 66/263 (25.10%), Postives = 105/263 (39.92%), Query Frame = 0
BLAST of HG10007740 vs. ExPASy TrEMBL
Match: A0A7J6F936 (CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_006510 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.5e-12 Identity = 51/164 (31.10%), Postives = 80/164 (48.78%), Query Frame = 0
BLAST of HG10007740 vs. ExPASy TrEMBL
Match: A0A7J6HAE9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012729 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.6e-12 Identity = 49/163 (30.06%), Postives = 78/163 (47.85%), Query Frame = 0
BLAST of HG10007740 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-08 Identity = 43/134 (32.09%), Postives = 58/134 (43.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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