HG10007740 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007740
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	zf-RVT domain-containing protein
Location	Chr10: 11385290 .. 11388718 (+)
RNA-Seq Expression	HG10007740
Synteny	HG10007740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGAGATTTACAAATTTATGAGGCCAACCTAACTCGAAGCTTAGACATCAGACTTGGCAGTTACTCCATCGTCTGTCAAATCATGATAACTCTGCTTGGGTTGTGGGAGGCGATCTTAATGAGATCTTATGGATGGTGGAAAAAGAAGGTGGCTTTCAGCGGGATGAGTCTCTTATGGCCAATTTTCGCTCAACACTGGATGACTGTTCACTCCAAGACCTTGGCTTTCAAGGAGATAAATTTACTTGGTGTAATAGATGGGATCATCCCCATTAGGTGAGTCTTCATCTTTATAGGTTTCTCACTAATATTGAATTTATGTCTCTTTTTTCAGATCACGGAGTGTACAATCATAAGTGGGCCAAATCTAATCATAGACACATTGAATTGTCTCTTGGTATCTTCTTATTCGCGAAGTGGGGGGCACAAATTTTGACCTTTTCGTTTCAATGAAAATTGGTCTTTGCATGAGTATTGCAGGAAAATTGTGAGTGAATCTGTATATTGGGAGGGTGGTGTTTGTAACCCGACTACGAGAGATTTTAAGTTGGGGGTTTGTGCCATAAATTTGAAAAAGTGGGAAGGTGAAGTAATCAAAGGGCTTTTCCAAAATATCAAGAGGCTTCGTGCAGAAATTCAGGCAGTTTATGACAATCAGAATCTCATCAACTATAGTATTATTAGGGAGTTAGAAAAGAAGCTCCATTTGTTGCTTTTAGAGGAGGAGATTTATTGGATGCAGAGATCGAGGGAAAACTGGCTTTGGTGGGGGGACAGAAATACTCGCTGGTTTCACCAACAAGCATCACGCCATCATTGTAAAAATTATATCTGGGGCATTTTGAATAATGTTGGTGTGTGGACTGATGATGAAACTGTGGTTAGTAATACATTCCTTAACTGCTTTGAGAATATTTTTAATTCTTTGAATCCACCTGATGAAGCTATGAGTATGGTTCTTGAGGGTATTCAACTAATGGTGACTTCAACCATGAATGAATTTCTATGTTGACCGTTTATTACTGAGGAGGTGGAGAATGCTCTGAAATCGTGTCATCCCTCAAAAGCCCCTGGCCTTGACAGTTTTTCGACTGTTTTTTATAAAAAATATTGGGACATAGTGGGAAAGAGCATCACTAGATGTGCTCTAGCCATACTTAATCGCAAGGCTTCGATAAAAGACTGGAATAAGACCCATATAGCTCTCATCCCAAAGATCAATAACCCCAGGTCTATTTCTGAATTTCGCCCTATCAGTCTATGTAATGTCATATACAAATTGATCACTAAAACGATGACTGATAGACTTAAATTGGTCATGGAGGACATTATTTCTATTAACCAATCTGCCTTTGTGCCTGATCGTCTGATTAGTGATAATATCATTTTAAGCTATGAATGTTTAAATTACATAAGGAAAAAGAGAAAAGGGTATGTAGGTTATGCTGCATTGAAGATTGATATGAGTAAGGCGTATGATAGAGCCGAATGGAATTTTCTTAAGAAAATTCTAGTCAAGATGGGTTTCTATCAAGGTTGGGTTGAGCTGGTTATGGATTGTGTGACAATAGTTAATTTTTCCATTCTTATTAATGAGGTGGCTCATTGATCTATATGTCCTTCGAGACGTTTAAGGCAAGGTGACCCTCTTTCTCCTTATTTGTTTGTCATCTGTGCTAAAGGCCTTTCATATATGATTAAAAGGGAATATCCTAGAGGAAATTTGTCTAGTATGTCAATTTCTTGCCTTTGTGATCCTATTACTCACCTATTTTTTGTTGATGATAGCTTGATTTTCCTTAAAGCTAATGCTCAAGAATTTGGAGTTTTTAAGTTGATACTTCATACATATGAAAGAGCATTGGGGCAATGTGTTAATCTCTCCAAGTCAACAATGTTTTTATCCCCTAATGTTCAAGCAGATTGCAAAATTTTTCTGGAGAGTCTTATTAATGTGAAGGCATTTGAAAGGTTGGATTCTTATTTGGGTCTTCCCTCTATTCTTACTAAAAGGAAGATTGATGATTTTAAGGCCATTAAGGAGATGGTGTGGAAGGTCTTGCAAGGTTGGAAAAATAACATTTTCTTTGTTGGAGCAAAGGAAATCTTGATTAAGAGTATTGCCCAAGCTATTCCTACTTATGTGATGAGTTGTTTTCGTCTCCAAAAGGGTCTTTGCTGTGATATTATGAGGCTTTGTGCCAAATTTTGGTGGGGTTCAAGTGATGAAAAAAGAAAAATACATTTGATGAGATGGGATAAATTATGCTTTCCAAAAGAGTTGGGTGGTTTGAATTTCAAAGATATTGAATTATTTAACCAGGCTCTTCTTGCGAAACAAGCATGGAGGATTTTAAAGAACCCTCATTCGCTAGTTAGTAGGGTTTTGAAGGGGAGATATTTCCCATCTTGTTCTATTCTGGAGGCATCATGTTCAAGGTCAGACTCTTTCTTTTGGAATGGCCTATGCTAAGGGAAAGAAATACTGTTGAAAGGAGTTCGGAAGGCTATTGGTAATGGGAGATCAAATCTGGCTTTCATAGACCCTTGGATTCTCAAACCATCTACCTTCAAGGTTGGTACCCATAATGGTTTGAGTGAAAACAGATTGGTTGCCGATTTTATTTCTCCTTCTAGCGACTAGGATTTAAATAAGTTGCAATCGGCCTTTATTCAAGAAGACATCATGGAGATTCTTAAAAATCCCCCAGTAGGAGTAATAGGGAAGATATATGTATTTGGCATTTCAACAAGCATGGTGAATACTTAGTCAAGAGCGGTTATAGAAGTGCTATTTTCGATAGATTTATGAGAAATGGATCTAGGTTGGATCAATCATTTGGGTGGTGGAAGAGATTATGGGCTCTAAAAATTCATAGTTTGACAAACCTCAAGAAGCGGGGTATGGATGTTATTCCAGGTTGTTCGATTTGTAGAAGAAAAAAGGAAACTGTGACACATGCTTTGTTTGATTGTTCTAGGGCCAGGGTTGTGTGGTCTATCATTATTTAGTTGTAGTTGGCTATGGGAAGCTAGGAATAAGGATTGTTTGGATATCTGGATGGAGCTGGACAGAAGTTTCAATGACTTTGATCTAGCTTAGGCTTGCATTACCGCCTGGGCTATTTGGGGAGACATGAATAAAGTTCATAACTCGGAAGGTATCCCTTCTGTGGAGCATCGGTGTGAGTGGATTTTGGAGTATTCAAGGGAAGTTAGGGTGAAACTAAAAGAGCAATTTAGTTCTATTATTGGTTCAAAAATTTACGATATTAGTGCTTTGAACATCCTTCATGTTGATGCAGCATGTAGAATGGATTCCTCGGTGATGGGTTATGGTGGGGTTATTAGTTTCCTGTCTGGCTATTTGATGGCTGCTGTGCATGGTTTTCAAAAGATTTCTCGGAGTCCGTTGGGAGCTTAA

mRNA sequence

ATGGGTGGAGATTTACAAATTTATGAGGCCAACCTAACTCGAAGCTTAGACATCAGACTTGGCAGTTACTCCATCGTCTGTCAAATCATGATAACTCTGCTTGGGTTGTGGGAGGCGATCTTAATGAGATCTTATGGATGGTGGAAAAAGAAGGTGGCTTTCAGCGGGATGAGTCTCTTATGGCCAATTTTCGCTCAACACTGGATGACTGTTCACTCCAAGACCTTGGCTTTCAAGGAGATAAATTTACTTGGTGTAATAGATGGGATCATCCCCATTAGGAGTAATAGGGAAGATATATGTATTTGGCATTTCAACAAGCATGGTGAATACTTAGTCAAGAGCGGTTATAGAAGTGCTATTTTCGATAGATTTATGAGAAATGGATCTAGGTTGGATCAATCATTTGGGTGGTGGAAGAGATTATGGGCTCTAAAAATTCATAGTTTGACAAACCTCAAGAAGCGGGGTATGGATGTTATTCCAGGTTGTTCGATTTGTAGAAGAAAAAAGGAAACTGTGACACATGCTTTGTTTGATTGTTCTAGGGCCAGGGTTGCTTGCATTACCGCCTGGGCTATTTGGGGAGACATGAATAAAGTTCATAACTCGGAAGGTATCCCTTCTGTGGAGCATCGGTGTGAGTGGATTTTGGAGTATTCAAGGGAAGTTAGGGTGAAACTAAAAGAGCAATTTAGTTCTATTATTGGTTCAAAAATTTACGATATTAGTGCTTTGAACATCCTTCATGTTGATGCAGCATGTAGAATGGATTCCTCGGTGATGGGTTATGGTGGGGTTATTAGTTTCCTGTCTGGCTATTTGATGGCTGCTGTGCATGGTTTTCAAAAGATTTCTCGGAGTCCGTTGGGAGCTTAA

Coding sequence (CDS)

ATGGGTGGAGATTTACAAATTTATGAGGCCAACCTAACTCGAAGCTTAGACATCAGACTTGGCAGTTACTCCATCGTCTGTCAAATCATGATAACTCTGCTTGGGTTGTGGGAGGCGATCTTAATGAGATCTTATGGATGGTGGAAAAAGAAGGTGGCTTTCAGCGGGATGAGTCTCTTATGGCCAATTTTCGCTCAACACTGGATGACTGTTCACTCCAAGACCTTGGCTTTCAAGGAGATAAATTTACTTGGTGTAATAGATGGGATCATCCCCATTAGGAGTAATAGGGAAGATATATGTATTTGGCATTTCAACAAGCATGGTGAATACTTAGTCAAGAGCGGTTATAGAAGTGCTATTTTCGATAGATTTATGAGAAATGGATCTAGGTTGGATCAATCATTTGGGTGGTGGAAGAGATTATGGGCTCTAAAAATTCATAGTTTGACAAACCTCAAGAAGCGGGGTATGGATGTTATTCCAGGTTGTTCGATTTGTAGAAGAAAAAAGGAAACTGTGACACATGCTTTGTTTGATTGTTCTAGGGCCAGGGTTGCTTGCATTACCGCCTGGGCTATTTGGGGAGACATGAATAAAGTTCATAACTCGGAAGGTATCCCTTCTGTGGAGCATCGGTGTGAGTGGATTTTGGAGTATTCAAGGGAAGTTAGGGTGAAACTAAAAGAGCAATTTAGTTCTATTATTGGTTCAAAAATTTACGATATTAGTGCTTTGAACATCCTTCATGTTGATGCAGCATGTAGAATGGATTCCTCGGTGATGGGTTATGGTGGGGTTATTAGTTTCCTGTCTGGCTATTTGATGGCTGCTGTGCATGGTTTTCAAAAGATTTCTCGGAGTCCGTTGGGAGCTTAA

Protein sequence

MGGDLQIYEANLTRSLDIRLGSYSIVCQIMITLLGLWEAILMRSYGWWKKKVAFSGMSLLWPIFAQHWMTVHSKTLAFKEINLLGVIDGIIPIRSNREDICIWHFNKHGEYLVKSGYRSAIFDRFMRNGSRLDQSFGWWKRLWALKIHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRARVACITAWAIWGDMNKVHNSEGIPSVEHRCEWILEYSREVRVKLKEQFSSIIGSKIYDISALNILHVDAACRMDSSVMGYGGVISFLSGYLMAAVHGFQKISRSPLGA

Homology

[Close]

BLAST of HG10007740 vs. NCBI nr
Match: KAF4391976.1 (hypothetical protein F8388_004305 [Cannabis sativa])

HSP 1 Score: 86.3 bits (212), Expect = 4.9e-13
Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 0


Query: 91  IPIRSNREDICIWHFNKHGEYLVKSGYRSA-IFDRFMRNGSRLDQSFGWWKRLWALK--- 150
           IPI ++ ED+ IW F K G Y+VKSGYR A   +      S +DQ+  WWK  W L    
Sbjct: 75  IPIDTHSEDMLIWPFTKDGNYIVKSGYRVAREMNLTPTRSSNMDQTHAWWKMWWGLNLPP 134

Query: 151 -------------IHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRARVACITAWA 210
                        + + TNL  RGM + P C+ C R  ET++HAL++C + +      W 
Sbjct: 135 RMKLFGWKMCRNWLPAKTNLVHRGMKINPICTNCGRFDETLSHALWNCEKVK----KVWK 194

Query: 211 IWGDMNKVHNSEGIPSVEHRCEWILEYSREVRVKLKEQFSSII 237
           +    N + +S G        + ++E+  ++    KE+F  ++
Sbjct: 195 LMPSYNIIKDSRG----NSMMDLLVEFKHKL---AKEEFEDVV 226

[Close]

BLAST of HG10007740 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-12
Identity = 66/263 (25.10%), Postives = 105/263 (39.92%), Query Frame = 0


Query: 91   IPIRS-NREDICIWHFNKHGEYLVKSGYRSAIFDRFMRNGSRLDQSFGWWKRLWAL---- 150
            +PI S N +D  +WH++K G Y V+SGY+  +  +     +  +     W  +W L    
Sbjct: 1083 MPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCNATSASTNYRGTQWNSIWKLTVPT 1142

Query: 151  ------------KIHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRAR-------- 210
                         I +  NL  RG+  +P C+IC  ++E++ HA F C RAR        
Sbjct: 1143 KIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTLFP 1202

Query: 211  ------------------------------VACITAWAIWGDMNKVHNSEGIPSVEHRCE 270
                                          +A IT W IW D N + + + +  VE +CE
Sbjct: 1203 FLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCE 1262

Query: 271  WILEYSREVRVKLKEQFSSIIGSKIYDI-------SALNI-LHVDAACRMDSSVMGYGGV 291
            W+  +           +S    S    +       S++++ L+ DAACR  S+   +G +
Sbjct: 1263 WLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAACRGAST--SFGCI 1322

[Close]

BLAST of HG10007740 vs. NCBI nr
Match: KAF4367202.1 (hypothetical protein F8388_006510 [Cannabis sativa])

HSP 1 Score: 83.6 bits (205), Expect = 3.2e-12
Identity = 51/164 (31.10%), Postives = 80/164 (48.78%), Query Frame = 0


Query: 91  IPIRSNREDICIWHFNKHGEYLVKSGYRSA-IFDRFMRNGSRLDQSFGWWKRLWALK--- 150
           IPI ++ ED+ IW F K G Y+VKSGY+ A   +      S +DQ+  WWK  W+L    
Sbjct: 505 IPIDTHSEDMLIWPFTKDGNYIVKSGYQVAREINLTPTRSSNMDQTHAWWKMWWSLNLPP 564

Query: 151 -------------IHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRARVACITAWA 210
                        + + TNL  RGM + P C+ C R +ET++HAL++C + +      W 
Sbjct: 565 RMKLFGWKMCRNWLPAKTNLVHRGMKINPICTNCGRFEETLSHALWNCEKVK----KVWK 624

Query: 211 IWGDMNKVHNSEGIPSVEHRCEWILEYSREVRVKL-KEQFSSII 237
           +      + +S G          +++   E R KL KE+F  ++
Sbjct: 625 LMPSYKIIKDSRG--------NSMMDLLVEFRHKLAKEEFEDVV 656

[Close]

BLAST of HG10007740 vs. NCBI nr
Match: KAF4384439.1 (hypothetical protein G4B88_028513 [Cannabis sativa] >KAF4392273.1 hypothetical protein F8388_012729 [Cannabis sativa])

HSP 1 Score: 82.8 bits (203), Expect = 5.4e-12
Identity = 49/163 (30.06%), Postives = 78/163 (47.85%), Query Frame = 0


Query: 91  IPIRSNREDICIWHFNKHGEYLVKSGYRSA-IFDRFMRNGSRLDQSFGWWKRLWALK--- 150
           IPI  + ED+ IW F K G Y+VKSGYR A   +      S +DQ+  WWK  W L    
Sbjct: 101 IPIDIHSEDMLIWPFTKDGNYIVKSGYRVAREMNLTPTRSSNMDQTHAWWKMWWGLNLPP 160

Query: 151 -------------IHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRARVACITAWA 210
                        + + TNL  RGM +   C+ C R  ET++HAL++C + +      W 
Sbjct: 161 RMKLFGWKMCRNWLPAKTNLVHRGMKINSICTNCGRFDETLSHALWNCEKVK----KVWK 220

Query: 211 IWGDMNKVHNSEGIPSVEHRCEWILEYSREVRVKLKEQFSSII 237
           +    N + +S G        + ++E+  ++   +KE+F  ++
Sbjct: 221 LMPSYNIIKDSRG----NSMMDLLVEFKHKL---VKEEFEDVV 252

[Close]

BLAST of HG10007740 vs. NCBI nr
Match: KAF4391669.1 (hypothetical protein F8388_005434 [Cannabis sativa] >KAF4400672.1 hypothetical protein G4B88_023080 [Cannabis sativa])

HSP 1 Score: 82.8 bits (203), Expect = 5.4e-12
Identity = 47/163 (28.83%), Postives = 80/163 (49.08%), Query Frame = 0


Query: 91  IPIRSNREDICIWHFNKHGEYLVKSGYRSA-IFDRFMRNGSRLDQSFGWWKRLWALK--- 150
           IPI ++ ED+ IW F K G Y+VKSGYR A   +      S +DQ+  WWK  W+L    
Sbjct: 426 IPIDTHSEDMLIWPFTKDGNYIVKSGYRVAREINLTPTRSSNMDQTHAWWKMWWSLNLPP 485

Query: 151 -------------IHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRARVACITAWA 210
                        + + TNL  RGM + P C+ C + ++T++HAL++C + +      W 
Sbjct: 486 RMKLFDWKMCRNWLPAKTNLVHRGMKINPICTNCDKFEKTLSHALWNCEKVK----KVWK 545

Query: 211 IWGDMNKVHNSEGIPSVEHRCEWILEYSREVRVKLKEQFSSII 237
           +      + +S G        + ++E+  ++    KE+F  ++
Sbjct: 546 LMPSYKLIKDSRG----NSMMDLLVEFKHKL---AKEEFEDVV 577

[Close]

BLAST of HG10007740 vs. ExPASy TrEMBL
Match: A0A7J6H9M1 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_004305 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-13
Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 0


Query: 91  IPIRSNREDICIWHFNKHGEYLVKSGYRSA-IFDRFMRNGSRLDQSFGWWKRLWALK--- 150
           IPI ++ ED+ IW F K G Y+VKSGYR A   +      S +DQ+  WWK  W L    
Sbjct: 75  IPIDTHSEDMLIWPFTKDGNYIVKSGYRVAREMNLTPTRSSNMDQTHAWWKMWWGLNLPP 134

Query: 151 -------------IHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRARVACITAWA 210
                        + + TNL  RGM + P C+ C R  ET++HAL++C + +      W 
Sbjct: 135 RMKLFGWKMCRNWLPAKTNLVHRGMKINPICTNCGRFDETLSHALWNCEKVK----KVWK 194

Query: 211 IWGDMNKVHNSEGIPSVEHRCEWILEYSREVRVKLKEQFSSII 237
           +    N + +S G        + ++E+  ++    KE+F  ++
Sbjct: 195 LMPSYNIIKDSRG----NSMMDLLVEFKHKL---AKEEFEDVV 226

[Close]

BLAST of HG10007740 vs. ExPASy TrEMBL
Match: A0A803PHH5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.2e-13
Identity = 49/163 (30.06%), Postives = 79/163 (48.47%), Query Frame = 0


Query: 91   IPIRSNREDICIWHFNKHGEYLVKSGYRSA-IFDRFMRNGSRLDQSFGWWKRLWALK--- 150
            IPI ++ ED+ IW F K G Y+VKSGYR A   +      S +DQ+  WWK  W+L    
Sbjct: 1287 IPIDTHSEDMLIWPFTKDGNYIVKSGYRVAREINLTPTRSSNMDQTHAWWKMWWSLNLPP 1346

Query: 151  -------------IHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRARVACITAWA 210
                         +   TNL  RGM + P C+ C R +ET++HAL++C + +      W 
Sbjct: 1347 RMKLFGWKMCRNWLPEKTNLVHRGMKINPICTNCDRFEETLSHALWNCEKVK----KVWK 1406

Query: 211  IWGDMNKVHNSEGIPSVEHRCEWILEYSREVRVKLKEQFSSII 237
            +      + +S G        + ++E+  ++    KE+F  ++
Sbjct: 1407 LMPSYKLIKDSRG----NSMMDLLVEFKHKL---AKEEFEDVV 1438

[Close]

BLAST of HG10007740 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.9e-13
Identity = 66/263 (25.10%), Postives = 105/263 (39.92%), Query Frame = 0


Query: 91   IPIRS-NREDICIWHFNKHGEYLVKSGYRSAIFDRFMRNGSRLDQSFGWWKRLWAL---- 150
            +PI S N +D  +WH++K G Y V+SGY+  +  +     +  +     W  +W L    
Sbjct: 1083 MPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCNATSASTNYRGTQWNSIWKLTVPT 1142

Query: 151  ------------KIHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRAR-------- 210
                         I +  NL  RG+  +P C+IC  ++E++ HA F C RAR        
Sbjct: 1143 KIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTLFP 1202

Query: 211  ------------------------------VACITAWAIWGDMNKVHNSEGIPSVEHRCE 270
                                          +A IT W IW D N + + + +  VE +CE
Sbjct: 1203 FLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCE 1262

Query: 271  WILEYSREVRVKLKEQFSSIIGSKIYDI-------SALNI-LHVDAACRMDSSVMGYGGV 291
            W+  +           +S    S    +       S++++ L+ DAACR  S+   +G +
Sbjct: 1263 WLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAACRGAST--SFGCI 1322

[Close]

BLAST of HG10007740 vs. ExPASy TrEMBL
Match: A0A7J6F936 (CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_006510 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-12
Identity = 51/164 (31.10%), Postives = 80/164 (48.78%), Query Frame = 0


Query: 91  IPIRSNREDICIWHFNKHGEYLVKSGYRSA-IFDRFMRNGSRLDQSFGWWKRLWALK--- 150
           IPI ++ ED+ IW F K G Y+VKSGY+ A   +      S +DQ+  WWK  W+L    
Sbjct: 505 IPIDTHSEDMLIWPFTKDGNYIVKSGYQVAREINLTPTRSSNMDQTHAWWKMWWSLNLPP 564

Query: 151 -------------IHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRARVACITAWA 210
                        + + TNL  RGM + P C+ C R +ET++HAL++C + +      W 
Sbjct: 565 RMKLFGWKMCRNWLPAKTNLVHRGMKINPICTNCGRFEETLSHALWNCEKVK----KVWK 624

Query: 211 IWGDMNKVHNSEGIPSVEHRCEWILEYSREVRVKL-KEQFSSII 237
           +      + +S G          +++   E R KL KE+F  ++
Sbjct: 625 LMPSYKIIKDSRG--------NSMMDLLVEFRHKLAKEEFEDVV 656

[Close]

BLAST of HG10007740 vs. ExPASy TrEMBL
Match: A0A7J6HAE9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012729 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-12
Identity = 49/163 (30.06%), Postives = 78/163 (47.85%), Query Frame = 0


Query: 91  IPIRSNREDICIWHFNKHGEYLVKSGYRSA-IFDRFMRNGSRLDQSFGWWKRLWALK--- 150
           IPI  + ED+ IW F K G Y+VKSGYR A   +      S +DQ+  WWK  W L    
Sbjct: 101 IPIDIHSEDMLIWPFTKDGNYIVKSGYRVAREMNLTPTRSSNMDQTHAWWKMWWGLNLPP 160

Query: 151 -------------IHSLTNLKKRGMDVIPGCSICRRKKETVTHALFDCSRARVACITAWA 210
                        + + TNL  RGM +   C+ C R  ET++HAL++C + +      W 
Sbjct: 161 RMKLFGWKMCRNWLPAKTNLVHRGMKINSICTNCGRFDETLSHALWNCEKVK----KVWK 220

Query: 211 IWGDMNKVHNSEGIPSVEHRCEWILEYSREVRVKLKEQFSSII 237
           +    N + +S G        + ++E+  ++   +KE+F  ++
Sbjct: 221 LMPSYNIIKDSRG----NSMMDLLVEFKHKL---VKEEFEDVV 252

[Close]

BLAST of HG10007740 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-08
Identity = 43/134 (32.09%), Postives = 58/134 (43.28%), Query Frame = 0


Query: 73  SKTLAFKEINLLGVIDGIIPIRSNREDICIWHFNKHGEYLVKSGYRSAIFDRFMRNGSRL 132
           SK   F + +  G I  I   +S + D  IW++N  GEY V+SGY     D    N   +
Sbjct: 91  SKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDP-STNIPAI 150

Query: 133 DQSFG---WWKRLWALKI-----HSL-----------TNLKKRGMDVIPGCSICRRKKET 188
           +   G      R+W L I     H L             L  RGM + P C  C R+ E+
Sbjct: 151 NPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENES 210

The following BLAST results are available for this feature:

BLAST of HG10007740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4391976.1	4.9e-13	30.67	hypothetical protein F8388_004305 [Cannabis sativa]	[more]
XP_022158377.1	1.4e-12	25.10	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
KAF4367202.1	3.2e-12	31.10	hypothetical protein F8388_006510 [Cannabis sativa]	[more]
KAF4384439.1	5.4e-12	30.06	hypothetical protein G4B88_028513 [Cannabis sativa] >KAF4392273.1 hypothetical p...	[more]
KAF4391669.1	5.4e-12	28.83	hypothetical protein F8388_005434 [Cannabis sativa] >KAF4400672.1 hypothetical p...	[more]

BLAST of HG10007740 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10007740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6H9M1	2.4e-13	30.67	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_004305 PE=4 SV=1	[more]
A0A803PHH5	5.2e-13	30.06	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A6J1DX30	6.9e-13	25.10	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A7J6F936	1.5e-12	31.10	CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_006510 P...	[more]
A0A7J6HAE9	2.6e-12	30.06	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012729 PE=4 SV=1	[more]

BLAST of HG10007740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09510.1	2.3e-08	32.09	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 135..185 e-value: 1.8E-7 score: 31.8
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 70..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007740.1	HG10007740.1	mRNA