HG10007402 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007402
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative
Location	Chr10: 4549373 .. 4550666 (-)
RNA-Seq Expression	HG10007402
Synteny	HG10007402

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTAATTTAGTAGCTTTTTCTCTCTTCTGCAACTTCCTTCTTCTGCTAGCTTCTTTTGCAGCCTCAAACATAGACCAAGACAGAACTGAGTGCTCAGATCAACTCATCGGCCTGGCCCCGTGCCTGCCGTATGTCAGCGGCGATGCCAAGACACCAACCATTGATTGTTGCAGTGGACTGAAGCAGGTGGTGCAGAAGAGCAAGAAATGCCTCTGTGTCCTTATCAAGGACAAAGATGACCCTAATCTTGGCCTCAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTAATGCCTGCCATGCCCCTGCCAACATCACTGAATGCATCTGTAAGCAAACTAATCCCCTGATTTTTTTTCTCTCTTTTTTCCTCTGTTTTGTTAACTTTGTATACAAATATGAGTCCAACGAATTCACGTTGTCTCCTTAGTTTTGAGAGTAATTATCTCTTAGGATAAAACAAATTATCTTTCTTATGAAACCAACATCTCGTATACAAGAACAACGAAATCTACTTTGTCAAGTAAACCAAACTTCAACGAACTTTTAGATGGGAGAAAAGTGTTATAAGAGAAAGAGAAGAGACATATTTAGACTAATTTGTGTTCTTCAAGTTGGTTAATAATTGGAAAAATGCATTCATTCATGAAAGAATGCAACCTATAGAATTAAAGAGGAACATATAGTTTATTCCAACATGTTTTTCACTTGGTAATTTTCTCAAACATCTATATGTCCATATGTTTCATGGCCAATCACTGCATTTCTCAGTTGGGCATTGTATCAAACATCTTGAGTGCATCTGTTTATGTACACAAAAGTTTTGGTTTTTCTTCTTATTTCTCAGTTGGGCATTTTGTCAAACACCTTGAGTGCATCTGTATGTAAACAAATTCCAGAGCTTTACACTGTATTTCTCAGTTAAACATTTTGTCAAACACCTTCTGGACATTGTATTTAACCTTGTTTTGTATATGGGTTTTCAGCTCTTTTGCACTTATCACCAAATTCTACAGAAGCAAAGATATTCAAAGAATCTAATCCCACCAGTGGACAAAGCAATTCCCCAGATACTAAAGGTAAAAAAACAAACTTCTATCTAACTTAACAGAAAGAATCATTAGCTTAGTATGGGTAAATTTTGATTTGCAGTTCATGGGAGTTCGTCCATTGCCAACGAGAAAAGCGATGGTGGAATGGGGAAGAGATGGAATGGAGGAACAGTGATGATTAAGGAGATTTTGCTAGGGTTCTTCATTCTATCGCATCTCAATCTAATGTTCATCTAG

mRNA sequence

ATGGCTTCTAATTTAGTAGCTTTTTCTCTCTTCTGCAACTTCCTTCTTCTGCTAGCTTCTTTTGCAGCCTCAAACATAGACCAAGACAGAACTGAGTGCTCAGATCAACTCATCGGCCTGGCCCCGTGCCTGCCGTATGTCAGCGGCGATGCCAAGACACCAACCATTGATTGTTGCAGTGGACTGAAGCAGGTGGTGCAGAAGAGCAAGAAATGCCTCTGTGTCCTTATCAAGGACAAAGATGACCCTAATCTTGGCCTCAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTAATGCCTGCCATGCCCCTGCCAACATCACTGAATGCATCTCTCTTTTGCACTTATCACCAAATTCTACAGAAGCAAAGATATTCAAAGAATCTAATCCCACCAGTGGACAAAGCAATTCCCCAGATACTAAAGTTCATGGGAGTTCGTCCATTGCCAACGAGAAAAGCGATGGTGGAATGGGGAAGAGATGGAATGGAGGAACAGTGATGATTAAGGAGATTTTGCTAGGGTTCTTCATTCTATCGCATCTCAATCTAATGTTCATCTAG

Coding sequence (CDS)

ATGGCTTCTAATTTAGTAGCTTTTTCTCTCTTCTGCAACTTCCTTCTTCTGCTAGCTTCTTTTGCAGCCTCAAACATAGACCAAGACAGAACTGAGTGCTCAGATCAACTCATCGGCCTGGCCCCGTGCCTGCCGTATGTCAGCGGCGATGCCAAGACACCAACCATTGATTGTTGCAGTGGACTGAAGCAGGTGGTGCAGAAGAGCAAGAAATGCCTCTGTGTCCTTATCAAGGACAAAGATGACCCTAATCTTGGCCTCAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTAATGCCTGCCATGCCCCTGCCAACATCACTGAATGCATCTCTCTTTTGCACTTATCACCAAATTCTACAGAAGCAAAGATATTCAAAGAATCTAATCCCACCAGTGGACAAAGCAATTCCCCAGATACTAAAGTTCATGGGAGTTCGTCCATTGCCAACGAGAAAAGCGATGGTGGAATGGGGAAGAGATGGAATGGAGGAACAGTGATGATTAAGGAGATTTTGCTAGGGTTCTTCATTCTATCGCATCTCAATCTAATGTTCATCTAG

Protein sequence

MASNLVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEAKIFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILSHLNLMFI

Homology

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BLAST of HG10007402 vs. NCBI nr
Match: XP_038878589.1 (non-specific lipid transfer protein GPI-anchored 6-like [Benincasa hispida])

HSP 1 Score: 344.0 bits (881), Expect = 8.3e-91
Identity = 176/187 (94.12%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 1   MASNLVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MASNL AFSLFCNFLLLLASFAASNIDQDRTECSDQL GLAPCLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLAAFSLFCNFLLLLASFAASNIDQDRTECSDQLTGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPN CHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNDCHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILS 180
           TEAKIFKESNPTSG S+SPDTKVHGSSS ANEKSDGGMGKRW G T MI  ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSGPSSSPDTKVHGSSSTANEKSDGGMGKRWIGSTEMIMGILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of HG10007402 vs. NCBI nr
Match: XP_008451096.1 (PREDICTED: protein YLS3-like [Cucumis melo] >KAA0055642.1 protein YLS3-like [Cucumis melo var. makuwa] >TYK09896.1 protein YLS3-like [Cucumis melo var. makuwa])

HSP 1 Score: 341.3 bits (874), Expect = 5.4e-90
Identity = 174/187 (93.05%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 1   MASNLVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MASNL  FS  CNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP+ACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILS 180
           TEAKIFKESNPTS  S+SPDTKVHGSSS ANEKSDGGMGKRW GGT MI +ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of HG10007402 vs. NCBI nr
Match: XP_004144111.1 (protein YLS3 isoform X1 [Cucumis sativus] >KGN66415.1 hypothetical protein Csa_007242 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 5.6e-87
Identity = 169/187 (90.37%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MASNLVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MAS L  FS  CNFLLLLASF+AS+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCS
Sbjct: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP+ACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILS 180
           TEAKIFKESNPTS  S+SPDTKVHGSSS+ANEKSDGGMGKRW GGT MI +ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of HG10007402 vs. NCBI nr
Match: XP_023515387.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.2 bits (757), Expect = 2.0e-76
Identity = 157/184 (85.33%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 6   VAFSLFCN-FLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 65
           +A  +FCN  LLLLA FAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 66  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEAK 125
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LPNACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 126 IFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILSHLN- 185
           IFKESN TS  S++PD+KVHGSSS ANEKSDGG  K+  GG  MI EILLGFFILSHLN 
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSSSTANEKSDGGTRKKPIGGAGMIMEILLGFFILSHLNS 180

Query: 186 LMFI 188
           L FI
Sbjct: 181 LKFI 184

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BLAST of HG10007402 vs. NCBI nr
Match: XP_022960972.1 (protein YLS3-like [Cucurbita moschata] >KAG6590243.1 Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023884.1 Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.8 bits (756), Expect = 2.6e-76
Identity = 156/184 (84.78%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 6   VAFSLFCN-FLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 65
           +A  +FCN  LLLLA FAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 66  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEAK 125
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LPNACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 126 IFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILSHL-N 185
           IFKESN TS  S++PD+KVHGS+S ANEKSDGG  K+  GG  MI EILLGFFILSHL N
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSASTANEKSDGGTSKKPIGGAGMIMEILLGFFILSHLNN 180

Query: 186 LMFI 188
           L FI
Sbjct: 181 LKFI 184

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BLAST of HG10007402 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 3.9e-35
Identity = 79/159 (49.69%), Postives = 105/159 (66.04%), Query Frame = 0


Query: 17  LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           +L  F  S++ QDR EC++QLI L+ C+PYV GDAK PT DCC+G  QV++KS+KC+C+L
Sbjct: 17  MLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCIL 76

Query: 77  IKDKDDPNLGLKINGSLALALPNACHAPA-NITECISLLHLSPNSTEAKIFKESNPTSGQ 136
           ++DKDDP LG+KIN +LA  LP+ACH  A NIT+CIS+LHL  NST AK F+        
Sbjct: 77  VRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGRIEDN 136

Query: 137 SNSPD-TKVH----GSSSIANEKSDGGMGKRWNGGTVMI 170
            NS   T++H    G       KS+G   K W G  ++I
Sbjct: 137 YNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWLGVELLI 175

[Close]

BLAST of HG10007402 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.4e-34
Identity = 79/159 (49.69%), Postives = 114/159 (71.70%), Query Frame = 0


Query: 4   NLVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLK 63
           NL+A ++    + ++ + AA +  +D+ EC++QL+G+A CLPYV G AK+PT DCCSGLK
Sbjct: 7   NLMATAIALIVVAMVVA-AADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLK 66

Query: 64  QVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEA 123
           QV+  +KKCLCV+I+D++DP+LGL+IN SLALALP+ CHA A++T+C +LLHL PNS +A
Sbjct: 67  QVLNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDA 126

Query: 124 KIF----KESNPTSGQSNSPDTKVHGSSSIA-NEKSDGG 158
           ++F    K  N T G +++P     G  SI+    SD G
Sbjct: 127 QVFYQLAKGLNKT-GPASAPTGSSPGPISISPTSGSDDG 163

[Close]

BLAST of HG10007402 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.6e-31
Identity = 76/203 (37.44%), Postives = 123/203 (60.59%), Query Frame = 0


Query: 5   LVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 64
           ++A ++    + ++   A ++  +D+ EC+ QL+G+A CLPYV G AK+PT DCCSGLKQ
Sbjct: 8   VMATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQ 67

Query: 65  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEAK 124
           V+    KCLC++I++++DP+LGL++N SLALALP+ CHA A+IT+C +LLHL PNS +A+
Sbjct: 68  VINSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQ 127

Query: 125 IFKE------------------SNPTSGQSNSPDTKVHGSS----SIANEKSDGGMGKRW 184
           +F +                  S PTS  S++P +    +S    S+          K+W
Sbjct: 128 VFYQLAKGLNETVSASAPTGSASEPTS-MSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQW 187

Query: 185 NGGTVMIKEILLGFFILSHLNLM 186
            G      E++  FF++ ++ ++
Sbjct: 188 LG-----LEVVAHFFVIFYIFIL 204

[Close]

BLAST of HG10007402 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-25
Identity = 54/115 (46.96%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 24  SNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQK--SKKCLCVLIKDKD 83
           S + QD   C D +  L  CLP+V+  AK P   CCS LK  + K  ++KCLC L+KD+D
Sbjct: 29  SELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQTRKCLCTLVKDRD 88

Query: 84  DPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEAKIFKESNPTSGQS 137
           DP LG K++ + A++LP+ACH PANI++C  LLHL P+S  ++IFK+   +S Q+
Sbjct: 89  DPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFKQFTESSSQT 143

[Close]

BLAST of HG10007402 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.2e-11
Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 14  FLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCL 73
           FL +  +  +S +   ++ C++ LI ++PCL Y++G++ +P   CC+ L +VVQ S  CL
Sbjct: 9   FLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCL 68

Query: 74  CVLIKDKDDPNLGLKINGSLALALPNACH 103
           C ++ +     LG+ +N + AL LP AC+
Sbjct: 69  CQVL-NGGGSQLGINVNQTQALGLPRACN 96

[Close]

BLAST of HG10007402 vs. ExPASy TrEMBL
Match: A0A5A7UIG8 (Protein YLS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00060 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.6e-90
Identity = 174/187 (93.05%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 1   MASNLVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MASNL  FS  CNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP+ACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILS 180
           TEAKIFKESNPTS  S+SPDTKVHGSSS ANEKSDGGMGKRW GGT MI +ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of HG10007402 vs. ExPASy TrEMBL
Match: A0A1S3BRH1 (protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103492476 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.6e-90
Identity = 174/187 (93.05%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 1   MASNLVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MASNL  FS  CNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP+ACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILS 180
           TEAKIFKESNPTS  S+SPDTKVHGSSS ANEKSDGGMGKRW GGT MI +ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of HG10007402 vs. ExPASy TrEMBL
Match: A0A0A0LX07 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G602030 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.7e-87
Identity = 169/187 (90.37%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MASNLVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60
           MAS L  FS  CNFLLLLASF+AS+IDQDRT+CSDQLIGLA CLPYVSGDAKTPTIDCCS
Sbjct: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP+ACHAPANITECISLLHLSPNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILS 180
           TEAKIFKESNPTS  S+SPDTKVHGSSS+ANEKSDGGMGKRW GGT MI +ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180

Query: 181 HLNLMFI 188
           HLNLMFI
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of HG10007402 vs. ExPASy TrEMBL
Match: A0A6J1H8W0 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111461612 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 156/184 (84.78%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 6   VAFSLFCN-FLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 65
           +A  +FCN  LLLLA FAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 66  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEAK 125
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LPNACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 126 IFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILSHL-N 185
           IFKESN TS  S++PD+KVHGS+S ANEKSDGG  K+  GG  MI EILLGFFILSHL N
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSASTANEKSDGGTSKKPIGGAGMIMEILLGFFILSHLNN 180

Query: 186 LMFI 188
           L FI
Sbjct: 181 LKFI 184

[Close]

BLAST of HG10007402 vs. ExPASy TrEMBL
Match: A0A6J1JIZ5 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111485523 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.8e-76
Identity = 156/184 (84.78%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 6   VAFSLFCN-FLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 65
           +A  +FCN  LLLLA FA SNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ
Sbjct: 1   MALFVFCNLLLLLLAPFAVSNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 60

Query: 66  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEAK 125
           VVQKSKKCLCVLIKDKDDPNLGLKINGSLAL LPNACHAP+NITECISLLHL+PNSTEAK
Sbjct: 61  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAK 120

Query: 126 IFKESNPTSGQSNSPDTKVHGSSSIANEKSDGGMGKRWNGGTVMIKEILLGFFILSHLN- 185
           IFKESN TS  S++PD+KVHGSSS ANEKSDGG  K+  GG  MI EILLGFFILSHLN 
Sbjct: 121 IFKESNSTSEPSSAPDSKVHGSSSTANEKSDGGTRKKPIGGVGMIMEILLGFFILSHLNS 180

Query: 186 LMFI 188
           L FI
Sbjct: 181 LKFI 184

[Close]

BLAST of HG10007402 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-36
Identity = 79/156 (50.64%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 17  LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           +L  F  S++ QDR EC++QLI L+ C+PYV GDAK PT DCC+G  QV++KS+KC+C+L
Sbjct: 60  MLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCIL 119

Query: 77  IKDKDDPNLGLKINGSLALALPNACHAPA-NITECISLLHLSPNSTEAKIFKESNPTSGQ 136
           ++DKDDP LG+KIN +LA  LP+ACH  A NIT+CIS+LHL  NST AK F+        
Sbjct: 120 VRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGRIEDN 179

Query: 137 SNSPD-TKVH-GSSSIANEKSDGGMGKRWNGGTVMI 170
            NS   T++H G       KS+G   K W G  ++I
Sbjct: 180 YNSTSPTQIHKGGGKAEPVKSNGWKEKSWLGVELLI 215

[Close]

BLAST of HG10007402 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 2.8e-36
Identity = 79/159 (49.69%), Postives = 105/159 (66.04%), Query Frame = 0


Query: 17  LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQKSKKCLCVL 76
           +L  F  S++ QDR EC++QLI L+ C+PYV GDAK PT DCC+G  QV++KS+KC+C+L
Sbjct: 60  MLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCIL 119

Query: 77  IKDKDDPNLGLKINGSLALALPNACHAPA-NITECISLLHLSPNSTEAKIFKESNPTSGQ 136
           ++DKDDP LG+KIN +LA  LP+ACH  A NIT+CIS+LHL  NST AK F+        
Sbjct: 120 VRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGRIEDN 179

Query: 137 SNSPD-TKVH----GSSSIANEKSDGGMGKRWNGGTVMI 170
            NS   T++H    G       KS+G   K W G  ++I
Sbjct: 180 YNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWLGVELLI 218

[Close]

BLAST of HG10007402 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 145.2 bits (365), Expect = 5.3e-35
Identity = 79/159 (49.69%), Postives = 114/159 (71.70%), Query Frame = 0


Query: 4   NLVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLK 63
           NL+A ++    + ++ + AA +  +D+ EC++QL+G+A CLPYV G AK+PT DCCSGLK
Sbjct: 7   NLMATAIALIVVAMVVA-AADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLK 66

Query: 64  QVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEA 123
           QV+  +KKCLCV+I+D++DP+LGL+IN SLALALP+ CHA A++T+C +LLHL PNS +A
Sbjct: 67  QVLNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDA 126

Query: 124 KIF----KESNPTSGQSNSPDTKVHGSSSIA-NEKSDGG 158
           ++F    K  N T G +++P     G  SI+    SD G
Sbjct: 127 QVFYQLAKGLNKT-GPASAPTGSSPGPISISPTSGSDDG 163

[Close]

BLAST of HG10007402 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-32
Identity = 76/203 (37.44%), Postives = 123/203 (60.59%), Query Frame = 0


Query: 5   LVAFSLFCNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQ 64
           ++A ++    + ++   A ++  +D+ EC+ QL+G+A CLPYV G AK+PT DCCSGLKQ
Sbjct: 8   VMATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQ 67

Query: 65  VVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEAK 124
           V+    KCLC++I++++DP+LGL++N SLALALP+ CHA A+IT+C +LLHL PNS +A+
Sbjct: 68  VINSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQ 127

Query: 125 IFKE------------------SNPTSGQSNSPDTKVHGSS----SIANEKSDGGMGKRW 184
           +F +                  S PTS  S++P +    +S    S+          K+W
Sbjct: 128 VFYQLAKGLNETVSASAPTGSASEPTS-MSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQW 187

Query: 185 NGGTVMIKEILLGFFILSHLNLM 186
            G      E++  FF++ ++ ++
Sbjct: 188 LG-----LEVVAHFFVIFYIFIL 204

[Close]

BLAST of HG10007402 vs. TAIR 10
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 54/115 (46.96%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 24  SNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQVVQK--SKKCLCVLIKDKD 83
           S + QD   C D +  L  CLP+V+  AK P   CCS LK  + K  ++KCLC L+KD+D
Sbjct: 29  SELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQTRKCLCTLVKDRD 88

Query: 84  DPNLGLKINGSLALALPNACHAPANITECISLLHLSPNSTEAKIFKESNPTSGQS 137
           DP LG K++ + A++LP+ACH PANI++C  LLHL P+S  ++IFK+   +S Q+
Sbjct: 89  DPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFKQFTESSSQT 143

The following BLAST results are available for this feature:

BLAST of HG10007402 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878589.1	8.3e-91	94.12	non-specific lipid transfer protein GPI-anchored 6-like [Benincasa hispida]	[more]
XP_008451096.1	5.4e-90	93.05	PREDICTED: protein YLS3-like [Cucumis melo] >KAA0055642.1 protein YLS3-like [Cuc...	[more]
XP_004144111.1	5.6e-87	90.37	protein YLS3 isoform X1 [Cucumis sativus] >KGN66415.1 hypothetical protein Csa_0...	[more]
XP_023515387.1	2.0e-76	85.33	protein YLS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960972.1	2.6e-76	84.78	protein YLS3-like [Cucurbita moschata] >KAG6590243.1 Protein YLS3, partial [Cucu...	[more]

BLAST of HG10007402 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I082	3.9e-35	49.69	Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=37...	[more]
O64865	7.4e-34	49.69	Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3...	[more]
O64864	2.6e-31	37.44	Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3...	[more]
Q9M2G1	1.7e-25	46.96	Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3...	[more]
Q9LJ86	5.2e-11	34.83	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of HG10007402 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UIG8	2.6e-90	93.05	Protein YLS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G000...	[more]
A0A1S3BRH1	2.6e-90	93.05	protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103492476 PE=3 SV=1	[more]
A0A0A0LX07	2.7e-87	90.37	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G602030 PE=4 SV...	[more]
A0A6J1H8W0	1.3e-76	84.78	protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111461612 PE=3 SV=1	[more]
A0A6J1JIZ5	2.8e-76	84.78	protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111485523 PE=3 SV=1	[more]

BLAST of HG10007402 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55260.2	1.3e-36	50.64	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.1	2.8e-36	49.69	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44300.1	5.3e-35	49.69	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44290.1	1.9e-32	37.44	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G58550.1	1.2e-26	46.96	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 32..48 score: 33.12 coord: 88..105 score: 27.01 coord: 53..67 score: 30.36
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 33..110 e-value: 9.4E-7 score: 38.4
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 17..110 e-value: 1.2E-13 score: 51.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 30..110 e-value: 5.6E-14 score: 53.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 31..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..157
None	No IPR available	PANTHER	PTHR33044:SF194	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 10..173
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 40..102 e-value: 4.46371E-19 score: 75.1558
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 10..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007402.1	HG10007402.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding