HG10007100 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007100
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Nuclear transcription factor Y
Location	Chr10: 1225220 .. 1226002 (-)
RNA-Seq Expression	HG10007100
Synteny	HG10007100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAGCAAGGGCATGGCCAGCCTCCATCCATGGGAGCAGTTGGCAGTGGAGGTCAGATAGCATATGGTAGCAACCTGTACCATCCAAGCCAAATGACTGTAGGTCCGACTTCCGGATCTGTCGTTACATCAGTCGGAGGTATTCAGTCTACAAGTCAACCTGGTGGTGCTCAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAACAACTTCAACAACAGCTCCAGACTTTTTGGGTAAATCAATACCAAGAGATTGAGAAGGTAACAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAAATCATGAAGGCTGACGAGGACGTACGAATGATATCGGCCGAGGCACCTGTTCTATTTGCTAGGGCTTGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCATACCGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATAGTGCCGAGGGAGGATCTGAAAGACGAAGTACTCACATCAATTCCAAGAGGATCAATGACAGTTGGGGGGCCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAGGTTGGGGCACCTGGAATGATCATGGGTAAGCCCGTGATGGACCCAGCTATGTATGCTCCGCAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGCACAAGATCAAGCCCCTCCTGATCAATAG

mRNA sequence

ATGGATCAGCAAGGGCATGGCCAGCCTCCATCCATGGGAGCAGTTGGCAGTGGAGGTCAGATAGCATATGGTAGCAACCTGTACCATCCAAGCCAAATGACTGTAGGTCCGACTTCCGGATCTGTCGTTACATCAGTCGGAGGTATTCAGTCTACAAGTCAACCTGGTGGTGCTCAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAACAACTTCAACAACAGCTCCAGACTTTTTGGGTAAATCAATACCAAGAGATTGAGAAGGTAACAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAAATCATGAAGGCTGACGAGGACGTACGAATGATATCGGCCGAGGCACCTGTTCTATTTGCTAGGGCTTGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCATACCGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATAGTGCCGAGGGAGGATCTGAAAGACGAAGTACTCACATCAATTCCAAGAGGATCAATGACAGTTGGGGGGCCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAGGTTGGGGCACCTGGAATGATCATGGGTAAGCCCGTGATGGACCCAGCTATGTATGCTCCGCAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGCACAAGATCAAGCCCCTCCTGATCAATAG

Coding sequence (CDS)

ATGGATCAGCAAGGGCATGGCCAGCCTCCATCCATGGGAGCAGTTGGCAGTGGAGGTCAGATAGCATATGGTAGCAACCTGTACCATCCAAGCCAAATGACTGTAGGTCCGACTTCCGGATCTGTCGTTACATCAGTCGGAGGTATTCAGTCTACAAGTCAACCTGGTGGTGCTCAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAACAACTTCAACAACAGCTCCAGACTTTTTGGGTAAATCAATACCAAGAGATTGAGAAGGTAACAGACTTCAAGAACCATAGTCTTCCCTTAGCAAGGATCAAGAAAATCATGAAGGCTGACGAGGACGTACGAATGATATCGGCCGAGGCACCTGTTCTATTTGCTAGGGCTTGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCATACCGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATAGTGCCGAGGGAGGATCTGAAAGACGAAGTACTCACATCAATTCCAAGAGGATCAATGACAGTTGGGGGGCCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAGGTTGGGGCACCTGGAATGATCATGGGTAAGCCCGTGATGGACCCAGCTATGTATGCTCCGCAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGCACAAGATCAAGCCCCTCCTGATCAATAG

Protein sequence

MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMPPQMWQHAQDQAPPDQ

Homology

[Close]

BLAST of HG10007100 vs. NCBI nr
Match: XP_038879069.1 (nuclear transcription factor Y subunit C-9 [Benincasa hispida] >XP_038879070.1 nuclear transcription factor Y subunit C-9 [Benincasa hispida] >XP_038879071.1 nuclear transcription factor Y subunit C-9 [Benincasa hispida] >XP_038879072.1 nuclear transcription factor Y subunit C-9 [Benincasa hispida] >XP_038879073.1 nuclear transcription factor Y subunit C-9 [Benincasa hispida])

HSP 1 Score: 509.2 bits (1310), Expect = 2.1e-140
Identity = 257/260 (98.85%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQPPSMGAVGSGGQ+AYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRGSMTVGGPG+ALPYCYMPSQHAPQVGAPGMIMGKPVMDP MYAPQS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGEALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAPQS 240

Query: 241 HPYMPPQMWQHAQDQAPPDQ 261
           HPYMPPQMWQHAQDQAPPDQ
Sbjct: 241 HPYMPPQMWQHAQDQAPPDQ 260

[Close]

BLAST of HG10007100 vs. NCBI nr
Match: XP_022157074.1 (nuclear transcription factor Y subunit C-9 [Momordica charantia] >XP_022157080.1 nuclear transcription factor Y subunit C-9 [Momordica charantia])

HSP 1 Score: 499.6 bits (1285), Expect = 1.6e-137
Identity = 252/260 (96.92%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQPPSMGAVGSGGQ+AYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQP GAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRG++TVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDP MYA QS
Sbjct: 181 REDLKDEVLTSIPRGTITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQS 240

Query: 241 HPYMPPQMWQHAQDQAPPDQ 261
           HPYMPPQMWQHAQDQAPP+Q
Sbjct: 241 HPYMPPQMWQHAQDQAPPEQ 260

[Close]

BLAST of HG10007100 vs. NCBI nr
Match: XP_031735973.1 (nuclear transcription factor Y subunit C-9 [Cucumis sativus] >XP_031735974.1 nuclear transcription factor Y subunit C-9 [Cucumis sativus] >XP_031735975.1 nuclear transcription factor Y subunit C-9 [Cucumis sativus] >KGN66090.1 hypothetical protein Csa_007021 [Cucumis sativus])

HSP 1 Score: 498.0 bits (1281), Expect = 4.8e-137
Identity = 255/260 (98.08%), Postives = 257/260 (98.85%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQPPSMGAVGSGGQIAYGSNLYHP+QM+VGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRGSMTVGGPGD LPY YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 241 HPYMPPQMWQHAQDQAPPDQ 261
           HPYM PQMWQHAQDQAPPDQ
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 259

[Close]

BLAST of HG10007100 vs. NCBI nr
Match: XP_022933523.1 (nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_022933524.1 nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_022969894.1 nuclear transcription factor Y subunit C-9-like [Cucurbita maxima] >XP_022969901.1 nuclear transcription factor Y subunit C-9-like [Cucurbita maxima] >XP_022969911.1 nuclear transcription factor Y subunit C-9-like [Cucurbita maxima] >XP_023530278.1 nuclear transcription factor Y subunit C-9 [Cucurbita pepo subsp. pepo] >XP_023530279.1 nuclear transcription factor Y subunit C-9 [Cucurbita pepo subsp. pepo] >XP_023530280.1 nuclear transcription factor Y subunit C-9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135
Identity = 250/260 (96.15%), Postives = 253/260 (97.31%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQP SMGAVGSGGQIAYGSNLYHP Q+TVG TSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
            QHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  GQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRGS+TVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPA+YA QS
Sbjct: 181 REDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQS 240

Query: 241 HPYMPPQMWQHAQDQAPPDQ 261
           HPYMPPQMWQH QDQAPPDQ
Sbjct: 241 HPYMPPQMWQHTQDQAPPDQ 260

[Close]

BLAST of HG10007100 vs. NCBI nr
Match: XP_008450660.1 (PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo] >XP_016900989.1 PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo] >KAA0050877.1 nuclear transcription factor Y subunit C-9 [Cucumis melo var. makuwa] >TYK10229.1 nuclear transcription factor Y subunit C-9 [Cucumis melo var. makuwa])

HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134
Identity = 254/260 (97.69%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQ PSMGAVGSGGQIAYGSNLYHP+QM VGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQ-PSMGAVGSGGQIAYGSNLYHPNQMPVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRGSMTVGGPGD LPY YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 241 HPYMPPQMWQHAQDQAPPDQ 261
           HPYM PQMWQHAQDQAPPDQ
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 258

[Close]

BLAST of HG10007100 vs. ExPASy Swiss-Prot
Match: Q8L4B2 (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NFYC9 PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.5e-69
Identity = 166/262 (63.36%), Postives = 183/262 (69.85%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQ HGQ          G + YG+N Y        P S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQ-----TNPMSTTAATVAGG---AAQPG---- 60

Query: 61  AQHQLAYQHIH-QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 120
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 121 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 180
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 181 PREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQ 240
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P      Y P 
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP- 229

Query: 241 SHPYMPPQMW-QHAQDQAPPDQ 261
            +PYM   MW Q A DQ  PDQ
Sbjct: 241 -NPYMGQPMWQQQAPDQ--PDQ 229

[Close]

BLAST of HG10007100 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.9e-65
Identity = 149/249 (59.84%), Postives = 165/249 (66.27%), Query Frame = 0


Query: 12  MGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIH 71
           M   G    + YGSN Y  + MT  PT                           AY  IH
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSD----------------------HPAYHQIH 60

Query: 72  QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFA 131
           QQQQQQL QQLQ+FW  Q++EIEK TDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA
Sbjct: 61  QQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA 120

Query: 132 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTS 191
           RACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL  
Sbjct: 121 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGG 180

Query: 192 IPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMPPQMWQH 251
           +   + T  G     PY Y+P   AP +G PGM+MG    +P  Y P  +PYM   MWQ 
Sbjct: 181 VGAEAATAAG----YPYGYLPPGTAP-IGNPGMVMG----NPGAYPP--NPYMGQPMWQQ 216

Query: 252 -AQDQAPPD 260
              +Q  PD
Sbjct: 241 PGPEQQDPD 216

[Close]

BLAST of HG10007100 vs. ExPASy Swiss-Prot
Match: Q655V5 (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.3e-54
Identity = 137/257 (53.31%), Postives = 164/257 (63.81%), Query Frame = 0


Query: 10  PSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQ--LAQHQLAY 69
           P++G V  G Q+      Y P+     PT+ +V+ + G   + S P       AQHQL Y
Sbjct: 9   PAIGVVAGGSQV---YPAYRPAATV--PTAPAVIPA-GSQPAPSFPANPDQLSAQHQLVY 68

Query: 70  ---QHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISA 129
              Q  HQQ QQQ Q+QLQ FW  +  +IE+ TDFKNHSLPLARIKKIMKADEDVRMISA
Sbjct: 69  QQAQQFHQQLQQQQQRQLQQFWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISA 128

Query: 130 EAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL 189
           EAPV+FA+ACE+FILELTLRSW HTEENKRRTLQKNDIAAAITRTD++DFLVDIVPR+DL
Sbjct: 129 EAPVIFAKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDL 188

Query: 190 KDEVLTSIPRGSMTVGGPGDALPY-CYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPY 249
           K+E +     G   +G P D+ PY  Y+P Q  P  G             A    Q HP 
Sbjct: 189 KEEGVGLPRAGLPPLGVPADSYPYGYYVPQQQVPGAGI------------AYGGQQGHPG 247

Query: 250 MPPQMWQHAQDQAPPDQ 261
              Q  Q  Q++ P +Q
Sbjct: 249 YLWQDPQEQQEEPPAEQ 247

[Close]

BLAST of HG10007100 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.8e-53
Identity = 123/214 (57.48%), Postives = 144/214 (67.29%), Query Frame = 0


Query: 37  PTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKV 96
           P++  +     G   ++  GGA       +Y H+ QQQ    QQQLQ FW  Q QEIE+V
Sbjct: 10  PSAAGIPPPPPGTTISAAGGGA-------SYHHLLQQQ----QQQLQLFWTYQRQEIEQV 69

Query: 97  TDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRT 156
            DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+RSW H EENKRRT
Sbjct: 70  NDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRT 129

Query: 157 LQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHA 216
           LQKNDIAAAITRTDIFDFLVDIVPR+++KDE   ++  G M V      +PY Y P    
Sbjct: 130 LQKNDIAAAITRTDIFDFLVDIVPRDEIKDE--AAVLGGGMVVAPTASGVPYYYPPM--G 189

Query: 217 PQVGAPGMIMGKPVMDPAMYAPQSHPYMPPQMWQ 251
              G  GM++G+P MDP     Q     P Q WQ
Sbjct: 190 QPAGPGGMMIGRPAMDPNGVYVQP----PSQAWQ 204

[Close]

BLAST of HG10007100 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-52
Identity = 129/231 (55.84%), Postives = 147/231 (63.64%), Query Frame = 0


Query: 25  SNLYHPSQMTVGPTSGSVVTSV----GGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQ 84
           +N   P   +V P   +V T +     G  S    GGA        Y H+ QQQQQQLQ 
Sbjct: 7   NNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGA-------TYHHLLQQQQQQLQM 66

Query: 85  QLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILE 144
               FW  Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILE
Sbjct: 67  ----FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILE 126

Query: 145 LTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV-LTSIPRGSMTV 204
           LT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE++K+E    S   G   V
Sbjct: 127 LTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMV 186

Query: 205 GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMPPQMWQ 251
                 +PY Y P       G  GM++G+P MDP+    Q     P Q WQ
Sbjct: 187 APAASGVPYYYPPMGQPAVPG--GMMIGRPAMDPSGVYAQP----PSQAWQ 220

[Close]

BLAST of HG10007100 vs. ExPASy TrEMBL
Match: A0A6J1DS47 (nuclear transcription factor Y subunit C-9 OS=Momordica charantia OX=3673 GN=LOC111023881 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 7.9e-138
Identity = 252/260 (96.92%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQPPSMGAVGSGGQ+AYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQP GAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRG++TVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDP MYA QS
Sbjct: 181 REDLKDEVLTSIPRGTITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQS 240

Query: 241 HPYMPPQMWQHAQDQAPPDQ 261
           HPYMPPQMWQHAQDQAPP+Q
Sbjct: 241 HPYMPPQMWQHAQDQAPPEQ 260

[Close]

BLAST of HG10007100 vs. ExPASy TrEMBL
Match: A0A0A0LW22 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G570150 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.3e-137
Identity = 255/260 (98.08%), Postives = 257/260 (98.85%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQPPSMGAVGSGGQIAYGSNLYHP+QM+VGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRGSMTVGGPGD LPY YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 241 HPYMPPQMWQHAQDQAPPDQ 261
           HPYM PQMWQHAQDQAPPDQ
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 259

[Close]

BLAST of HG10007100 vs. ExPASy TrEMBL
Match: A0A6J1HZ39 (nuclear transcription factor Y subunit C-9-like OS=Cucurbita maxima OX=3661 GN=LOC111468953 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.7e-136
Identity = 250/260 (96.15%), Postives = 253/260 (97.31%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQP SMGAVGSGGQIAYGSNLYHP Q+TVG TSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
            QHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  GQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRGS+TVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPA+YA QS
Sbjct: 181 REDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQS 240

Query: 241 HPYMPPQMWQHAQDQAPPDQ 261
           HPYMPPQMWQH QDQAPPDQ
Sbjct: 241 HPYMPPQMWQHTQDQAPPDQ 260

[Close]

BLAST of HG10007100 vs. ExPASy TrEMBL
Match: A0A6J1F001 (nuclear transcription factor Y subunit C-9-like OS=Cucurbita moschata OX=3662 GN=LOC111440924 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.7e-136
Identity = 250/260 (96.15%), Postives = 253/260 (97.31%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQP SMGAVGSGGQIAYGSNLYHP Q+TVG TSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
            QHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  GQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRGS+TVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPA+YA QS
Sbjct: 181 REDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQS 240

Query: 241 HPYMPPQMWQHAQDQAPPDQ 261
           HPYMPPQMWQH QDQAPPDQ
Sbjct: 241 HPYMPPQMWQHTQDQAPPDQ 260

[Close]

BLAST of HG10007100 vs. ExPASy TrEMBL
Match: A0A1S3BQR3 (nuclear transcription factor Y subunit C-9 OS=Cucumis melo OX=3656 GN=LOC103492182 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.3e-135
Identity = 254/260 (97.69%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQGHGQ PSMGAVGSGGQIAYGSNLYHP+QM VGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQ-PSMGAVGSGGQIAYGSNLYHPNQMPVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 181 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240
           REDLKDEVLTSIPRGSMTVGGPGD LPY YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 241 HPYMPPQMWQHAQDQAPPDQ 261
           HPYM PQMWQHAQDQAPPDQ
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 258

[Close]

BLAST of HG10007100 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-70
Identity = 166/262 (63.36%), Postives = 183/262 (69.85%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQ HGQ          G + YG+N Y        P S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQ-----TNPMSTTAATVAGG---AAQPG---- 60

Query: 61  AQHQLAYQHIH-QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 120
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 121 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 180
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 181 PREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQ 240
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P      Y P 
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP- 229

Query: 241 SHPYMPPQMW-QHAQDQAPPDQ 261
            +PYM   MW Q A DQ  PDQ
Sbjct: 241 -NPYMGQPMWQQQAPDQ--PDQ 229

[Close]

BLAST of HG10007100 vs. TAIR 10
Match: AT1G08970.1 (nuclear factor Y, subunit C9 )

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-70
Identity = 166/262 (63.36%), Postives = 183/262 (69.85%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQ HGQ          G + YG+N Y        P S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQ-----TNPMSTTAATVAGG---AAQPG---- 60

Query: 61  AQHQLAYQHIH-QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 120
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 121 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 180
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 181 PREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQ 240
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P      Y P 
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP- 229

Query: 241 SHPYMPPQMW-QHAQDQAPPDQ 261
            +PYM   MW Q A DQ  PDQ
Sbjct: 241 -NPYMGQPMWQQQAPDQ--PDQ 229

[Close]

BLAST of HG10007100 vs. TAIR 10
Match: AT1G08970.3 (nuclear factor Y, subunit C9 )

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-70
Identity = 166/262 (63.36%), Postives = 183/262 (69.85%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQ HGQ          G + YG+N Y        P S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQ-----TNPMSTTAATVAGG---AAQPG---- 60

Query: 61  AQHQLAYQHIH-QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 120
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 121 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 180
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 181 PREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQ 240
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P      Y P 
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP- 229

Query: 241 SHPYMPPQMW-QHAQDQAPPDQ 261
            +PYM   MW Q A DQ  PDQ
Sbjct: 241 -NPYMGQPMWQQQAPDQ--PDQ 229

[Close]

BLAST of HG10007100 vs. TAIR 10
Match: AT1G08970.2 (nuclear factor Y, subunit C9 )

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-70
Identity = 166/262 (63.36%), Postives = 183/262 (69.85%), Query Frame = 0


Query: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60
           MDQQ HGQ          G + YG+N Y        P S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQ-----TNPMSTTAATVAGG---AAQPG---- 60

Query: 61  AQHQLAYQHIH-QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 120
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 121 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 180
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 181 PREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQ 240
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P      Y P 
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP- 229

Query: 241 SHPYMPPQMW-QHAQDQAPPDQ 261
            +PYM   MW Q A DQ  PDQ
Sbjct: 241 -NPYMGQPMWQQQAPDQ--PDQ 229

[Close]

BLAST of HG10007100 vs. TAIR 10
Match: AT1G54830.2 (nuclear factor Y, subunit C3 )

HSP 1 Score: 249.6 bits (636), Expect = 2.8e-66
Identity = 149/249 (59.84%), Postives = 165/249 (66.27%), Query Frame = 0


Query: 12  MGAVGSGGQIAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIH 71
           M   G    + YGSN Y  + MT  PT                           AY  IH
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSD----------------------HPAYHQIH 60

Query: 72  QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFA 131
           QQQQQQL QQLQ+FW  Q++EIEK TDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA
Sbjct: 61  QQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA 120

Query: 132 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTS 191
           RACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL  
Sbjct: 121 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGG 180

Query: 192 IPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMPPQMWQH 251
           +   + T  G     PY Y+P   AP +G PGM+MG    +P  Y P  +PYM   MWQ 
Sbjct: 181 VGAEAATAAG----YPYGYLPPGTAP-IGNPGMVMG----NPGAYPP--NPYMGQPMWQQ 216

Query: 252 -AQDQAPPD 260
              +Q  PD
Sbjct: 241 PGPEQQDPD 216

The following BLAST results are available for this feature:

BLAST of HG10007100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879069.1	2.1e-140	98.85	nuclear transcription factor Y subunit C-9 [Benincasa hispida] >XP_038879070.1 n...	[more]
XP_022157074.1	1.6e-137	96.92	nuclear transcription factor Y subunit C-9 [Momordica charantia] >XP_022157080.1...	[more]
XP_031735973.1	4.8e-137	98.08	nuclear transcription factor Y subunit C-9 [Cucumis sativus] >XP_031735974.1 nuc...	[more]
XP_022933523.1	1.2e-135	96.15	nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_0229335...	[more]
XP_008450660.1	1.3e-134	97.69	PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo] >XP_0169009...	[more]

BLAST of HG10007100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4B2	1.5e-69	63.36	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9ZVL3	3.9e-65	59.84	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q655V5	5.3e-54	53.31	Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9SMP0	5.8e-53	57.48	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FMV5	2.2e-52	55.84	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of HG10007100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DS47	7.9e-138	96.92	nuclear transcription factor Y subunit C-9 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0LW22	2.3e-137	98.08	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5701...	[more]
A0A6J1HZ39	5.7e-136	96.15	nuclear transcription factor Y subunit C-9-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F001	5.7e-136	96.15	nuclear transcription factor Y subunit C-9-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3BQR3	6.3e-135	97.69	nuclear transcription factor Y subunit C-9 OS=Cucumis melo OX=3656 GN=LOC1034921...	[more]

BLAST of HG10007100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08970.4	1.1e-70	63.36	nuclear factor Y, subunit C9	[more]
AT1G08970.1	1.1e-70	63.36	nuclear factor Y, subunit C9	[more]
AT1G08970.3	1.1e-70	63.36	nuclear factor Y, subunit C9	[more]
AT1G08970.2	1.1e-70	63.36	nuclear factor Y, subunit C9	[more]
AT1G54830.2	2.8e-66	59.84	nuclear factor Y, subunit C3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 103..166 e-value: 2.8E-18 score: 65.9
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 65..181 e-value: 5.0E-48 score: 164.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 71..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..260
None	No IPR available	PANTHER	PTHR10252:SF117	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9	coord: 1..259
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 1..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007100.1	HG10007100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity