HG10006850 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTAACGAAAATTAAAGAGAGAATCCACGAGTAA ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTAACGAAAATTAAAGAGAGAATCCACGAGTAA ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTAACGAAAATTAAAGAGAGAATCCACGAGTAA MAPTTEEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIKERIHE Homology
BLAST of HG10006850 vs. NCBI nr
Match: XP_038892176.1 (pleiotropic drug resistance protein 3-like [Benincasa hispida]) HSP 1 Score: 197.6 bits (501), Expect = 6.6e-47 Identity = 104/130 (80.00%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of HG10006850 vs. NCBI nr
Match: XP_031741892.1 (pleiotropic drug resistance protein 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 191.4 bits (485), Expect = 4.7e-45 Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of HG10006850 vs. NCBI nr
Match: XP_031745924.1 (ABC transporter G family member 37-like [Cucumis sativus]) HSP 1 Score: 191.4 bits (485), Expect = 4.7e-45 Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of HG10006850 vs. NCBI nr
Match: KAE8637316.1 (hypothetical protein CSA_019102, partial [Cucumis sativus]) HSP 1 Score: 191.4 bits (485), Expect = 4.7e-45 Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of HG10006850 vs. NCBI nr
Match: XP_004140460.1 (pleiotropic drug resistance protein 3 isoform X1 [Cucumis sativus] >KGN50690.2 hypothetical protein Csa_004732 [Cucumis sativus]) HSP 1 Score: 191.4 bits (485), Expect = 4.7e-45 Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of HG10006850 vs. ExPASy Swiss-Prot
Match: Q9LFH0 (ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=1 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.1e-26 Identity = 71/126 (56.35%), Postives = 88/126 (69.84%), Query Frame = 0
BLAST of HG10006850 vs. ExPASy Swiss-Prot
Match: Q5W274 (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.1e-26 Identity = 68/124 (54.84%), Postives = 91/124 (73.39%), Query Frame = 0
BLAST of HG10006850 vs. ExPASy Swiss-Prot
Match: Q9ZUT8 (ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 6.1e-19 Identity = 55/95 (57.89%), Postives = 69/95 (72.63%), Query Frame = 0
BLAST of HG10006850 vs. ExPASy Swiss-Prot
Match: Q7PC82 (ABC transporter G family member 42 OS=Arabidopsis thaliana OX=3702 GN=ABCG42 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.5e-12 Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of HG10006850 vs. ExPASy Swiss-Prot
Match: Q7PC83 (ABC transporter G family member 41 OS=Arabidopsis thaliana OX=3702 GN=ABCG41 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.3e-10 Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 0
BLAST of HG10006850 vs. ExPASy TrEMBL
Match: A0A0A0KMI3 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G292220 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.3e-45 Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of HG10006850 vs. ExPASy TrEMBL
Match: A0A5D3CR38 (Pleiotropic drug resistance protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00570 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43 Identity = 97/125 (77.60%), Postives = 110/125 (88.00%), Query Frame = 0
BLAST of HG10006850 vs. ExPASy TrEMBL
Match: A0A1S3C5F9 (LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like OS=Cucumis melo OX=3656 GN=LOC103496678 PE=3 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43 Identity = 97/125 (77.60%), Postives = 110/125 (88.00%), Query Frame = 0
BLAST of HG10006850 vs. ExPASy TrEMBL
Match: A0A6J1DJT5 (pleiotropic drug resistance protein 3-like OS=Momordica charantia OX=3673 GN=LOC111021552 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.6e-35 Identity = 93/131 (70.99%), Postives = 107/131 (81.68%), Query Frame = 0
BLAST of HG10006850 vs. ExPASy TrEMBL
Match: A0A6J1J0E0 (pleiotropic drug resistance protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481557 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.1e-26 Identity = 79/130 (60.77%), Postives = 88/130 (67.69%), Query Frame = 0
BLAST of HG10006850 vs. TAIR 10
Match: AT3G53480.1 (pleiotropic drug resistance 9 ) HSP 1 Score: 118.6 bits (296), Expect = 3.6e-27 Identity = 71/126 (56.35%), Postives = 88/126 (69.84%), Query Frame = 0
BLAST of HG10006850 vs. TAIR 10
Match: AT2G37280.1 (pleiotropic drug resistance 5 ) HSP 1 Score: 95.1 bits (235), Expect = 4.3e-20 Identity = 55/95 (57.89%), Postives = 69/95 (72.63%), Query Frame = 0
BLAST of HG10006850 vs. TAIR 10
Match: AT4G15233.1 (ABC-2 and Plant PDR ABC-type transporter family protein ) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13 Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of HG10006850 vs. TAIR 10
Match: AT4G15233.2 (ABC-2 and Plant PDR ABC-type transporter family protein ) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13 Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of HG10006850 vs. TAIR 10
Match: AT4G15215.1 (pleiotropic drug resistance 13 ) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11 Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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