HG10006850 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006850
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pleiotropic drug resistance protein 3-like
Location	Chr07: 22572582 .. 22572971 (+)
RNA-Seq Expression	HG10006850
Synteny	HG10006850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTAACGAAAATTAAAGAGAGAATCCACGAGTAA

mRNA sequence

ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTAACGAAAATTAAAGAGAGAATCCACGAGTAA

Coding sequence (CDS)

ATGGCTCCAACCACGGAGGAGAGGGAGCCGGTCGGAATTGAACTGCCGGAGATCGGAAGAATAAGAAGCTTTAGTTTGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAACTCAGCTGCAGCGGTAGTGGACGAGGACGAGAGGGATACTGTAGATGCTTCTCTTTGGGCAGCGGTCGAGAGATTACCGACGCTTGAACGGTTGAGATCATCGTTGTTCGACGATATTGGAGGAGTAGAAGTTGAGGAGAAAGGTGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTTATTCAAAAACTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTAACGAAAATTAAAGAGAGAATCCACGAGTAA

Protein sequence

MAPTTEEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIKERIHE

Homology

[Close]

BLAST of HG10006850 vs. NCBI nr
Match: XP_038892176.1 (pleiotropic drug resistance protein 3-like [Benincasa hispida])

HSP 1 Score: 197.6 bits (501), Expect = 6.6e-47
Identity = 104/130 (80.00%), Postives = 115/130 (88.46%), Query Frame = 0


Query: 1   MAPTTEEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDE-DERDTVDASLWAA 60
           MAPTTEE EPV IE+ EIGRIR  S S RQQ SSFRS+S A+  +E DERDT+DASLWA 
Sbjct: 1   MAPTTEEIEPVRIEVAEIGRIRRSSSSLRQQTSSFRSSSGASAEEEDDERDTLDASLWAT 60

Query: 61  VERLPTLERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKL 120
           VERLPT ERLRSSLFD++ GV+VEEKGGRRVVDVTKLGDVERHLFIQKLIKHI+NDNLKL
Sbjct: 61  VERLPTFERLRSSLFDNVKGVKVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIQNDNLKL 120

Query: 121 LTKIKERIHE 130
           LTKI+ERIH+
Sbjct: 121 LTKIRERIHK 130

[Close]

BLAST of HG10006850 vs. NCBI nr
Match: XP_031741892.1 (pleiotropic drug resistance protein 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 4.7e-45
Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+PEI RIRS S SFR+Q SSFRSNS A++ +E ERDT+DASLWA VERLPT
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIKE 125
            ERLRSSLF+D   VEV+E GGRRVVDVTKLGDVERHLFIQ+LIKHIENDNLKLLTKIKE
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 RIHE 130
           RIH+
Sbjct: 122 RIHK 125

[Close]

BLAST of HG10006850 vs. NCBI nr
Match: XP_031745924.1 (ABC transporter G family member 37-like [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 4.7e-45
Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+PEI RIRS S SFR+Q SSFRSNS A++ +E ERDT+DASLWA VERLPT
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIKE 125
            ERLRSSLF+D   VEV+E GGRRVVDVTKLGDVERHLFIQ+LIKHIENDNLKLLTKIKE
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 RIHE 130
           RIH+
Sbjct: 122 RIHK 125

[Close]

BLAST of HG10006850 vs. NCBI nr
Match: KAE8637316.1 (hypothetical protein CSA_019102, partial [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 4.7e-45
Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+PEI RIRS S SFR+Q SSFRSNS A++ +E ERDT+DASLWA VERLPT
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIKE 125
            ERLRSSLF+D   VEV+E GGRRVVDVTKLGDVERHLFIQ+LIKHIENDNLKLLTKIKE
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 RIHE 130
           RIH+
Sbjct: 122 RIHK 125

[Close]

BLAST of HG10006850 vs. NCBI nr
Match: XP_004140460.1 (pleiotropic drug resistance protein 3 isoform X1 [Cucumis sativus] >KGN50690.2 hypothetical protein Csa_004732 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 4.7e-45
Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+PEI RIRS S SFR+Q SSFRSNS A++ +E ERDT+DASLWA VERLPT
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIKE 125
            ERLRSSLF+D   VEV+E GGRRVVDVTKLGDVERHLFIQ+LIKHIENDNLKLLTKIKE
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 RIHE 130
           RIH+
Sbjct: 122 RIHK 125

[Close]

BLAST of HG10006850 vs. ExPASy Swiss-Prot
Match: Q9LFH0 (ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.1e-26
Identity = 71/126 (56.35%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDED----ERDTVDASLWAAVE 65
           ++ E + +EL EIG  RS   SFR+  SSFRS+S+   V+ D    + D   A  WA +E
Sbjct: 8   DDIESLRVELAEIG--RSIRSSFRRHTSSFRSSSSIYEVENDGDVNDHDAEYALQWAEIE 67

Query: 66  RLPTLERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLT 125
           RLPT++R+RS+L DD  G E   + GRRVVDVTKLG VERHL I+KLIKHIENDNLKLL 
Sbjct: 68  RLPTVKRMRSTLLDD--GDESMTEKGRRVVDVTKLGAVERHLMIEKLIKHIENDNLKLLK 127

Query: 126 KIKERI 128
           KI+ RI
Sbjct: 128 KIRRRI 129

[Close]

BLAST of HG10006850 vs. ExPASy Swiss-Prot
Match: Q5W274 (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.1e-26
Identity = 68/124 (54.84%), Postives = 91/124 (73.39%), Query Frame = 0


Query: 5   TEEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDER-DTVDASLWAAVERL 64
           ++E E   ++L EIG  RS   SFR Q+SSFRSNSA +   +D+  D  +   WAA+ERL
Sbjct: 7   SDEIESFRMDLAEIG--RSLRSSFRGQSSSFRSNSALSASQKDDAVDEENMLAWAAIERL 66

Query: 65  PTLERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKI 124
           PT +RLRSSLF++I G +   K  +RV DVTKLG +ERH+FI+K+IKHIE+DNL+LL KI
Sbjct: 67  PTFDRLRSSLFEEINGNDANVK-RKRVTDVTKLGALERHVFIEKMIKHIEHDNLQLLHKI 126

Query: 125 KERI 128
           ++RI
Sbjct: 127 RKRI 127

[Close]

BLAST of HG10006850 vs. ExPASy Swiss-Prot
Match: Q9ZUT8 (ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 6.1e-19
Identity = 55/95 (57.89%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 33  SSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKGGRRVVD 92
           SSFRS+S+    ++   +   A  WA ++RLPT +RLRSSL D  G  E  EK G++VVD
Sbjct: 3   SSFRSSSSRNEHEDGGDEAEHALQWAEIQRLPTFKRLRSSLVDKYG--EGTEK-GKKVVD 62

Query: 93  VTKLGDVERHLFIQKLIKHIENDNLKLLTKIKERI 128
           VTKLG +ERHL I+KLIKHIENDNLKLL KI+ R+
Sbjct: 63  VTKLGAMERHLMIEKLIKHIENDNLKLLKKIRRRM 94

[Close]

BLAST of HG10006850 vs. ExPASy Swiss-Prot
Match: Q7PC82 (ABC transporter G family member 42 OS=Arabidopsis thaliana OX=3702 GN=ABCG42 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-12
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 55  SLWAAVERLPTLERLRSSLF---DDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKH 114
           S W A+ER PT ER+ ++LF   D+ G     +K  RRV+DV+KL D++R LFI  LI+H
Sbjct: 29  SQWVAIERSPTFERITTALFCKRDEKG-----KKSQRRVMDVSKLDDLDRRLFIDDLIRH 88

Query: 115 IENDNLKLLTKIKERIHE 130
           +ENDN  LL KI++RI E
Sbjct: 89  VENDNHVLLQKIRKRIDE 101

[Close]

BLAST of HG10006850 vs. ExPASy Swiss-Prot
Match: Q7PC83 (ABC transporter G family member 41 OS=Arabidopsis thaliana OX=3702 GN=ABCG41 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-10
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 0


Query: 17  EIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLF-- 76
           ++ + +SF + F   N           VD++E+     S WA VERLPT +R+ ++L   
Sbjct: 7   DVDKAKSFQVEFACGNG----------VDDEEK---LRSQWATVERLPTFKRVTTALLHT 66

Query: 77  -DDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIKERIHE 130
            DD             ++DVTKL D ER L I+KL+K IE DNL+LL KI++RI E
Sbjct: 67  GDD----------SSDIIDVTKLEDAERRLLIEKLVKQIEADNLRLLRKIRKRIDE 99

[Close]

BLAST of HG10006850 vs. ExPASy TrEMBL
Match: A0A0A0KMI3 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G292220 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-45
Identity = 99/124 (79.84%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+PEI RIRS S SFR+Q SSFRSNS A++ +E ERDT+DASLWA VERLPT
Sbjct: 2   DEREPVRIEVPEIRRIRSLSSSFRRQASSFRSNSTASLEEEHERDTIDASLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIKE 125
            ERLRSSLF+D   VEV+E GGRRVVDVTKLGDVERHLFIQ+LIKHIENDNLKLLTKIKE
Sbjct: 62  FERLRSSLFEDKREVEVDENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIKE 121

Query: 126 RIHE 130
           RIH+
Sbjct: 122 RIHK 125

[Close]

BLAST of HG10006850 vs. ExPASy TrEMBL
Match: A0A5D3CR38 (Pleiotropic drug resistance protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00570 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43
Identity = 97/125 (77.60%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+ EI RIRS S SFR+Q  SFRS+SAA+V +E ERDT+D SLWA VERLPT
Sbjct: 2   DEREPVRIEVSEIRRIRSLSSSFRRQTLSFRSSSAASVEEEHERDTIDPSLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEV-EEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIK 125
            ERLRSSLF+D+ GVEV +E GGRRVVDVTKLGDVERHLFIQ+LIKHIENDNLKLLTKI+
Sbjct: 62  FERLRSSLFEDVRGVEVDQENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIR 121

Query: 126 ERIHE 130
           ERIH+
Sbjct: 122 ERIHK 126

[Close]

BLAST of HG10006850 vs. ExPASy TrEMBL
Match: A0A1S3C5F9 (LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like OS=Cucumis melo OX=3656 GN=LOC103496678 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43
Identity = 97/125 (77.60%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPT 65
           +EREPV IE+ EI RIRS S SFR+Q  SFRS+SAA+V +E ERDT+D SLWA VERLPT
Sbjct: 2   DEREPVRIEVSEIRRIRSLSSSFRRQTLSFRSSSAASVEEEHERDTIDPSLWATVERLPT 61

Query: 66  LERLRSSLFDDIGGVEV-EEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIK 125
            ERLRSSLF+D+ GVEV +E GGRRVVDVTKLGDVERHLFIQ+LIKHIENDNLKLLTKI+
Sbjct: 62  FERLRSSLFEDVRGVEVDQENGGRRVVDVTKLGDVERHLFIQRLIKHIENDNLKLLTKIR 121

Query: 126 ERIHE 130
           ERIH+
Sbjct: 122 ERIHK 126

[Close]

BLAST of HG10006850 vs. ExPASy TrEMBL
Match: A0A6J1DJT5 (pleiotropic drug resistance protein 3-like OS=Momordica charantia OX=3673 GN=LOC111021552 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.6e-35
Identity = 93/131 (70.99%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1   MAPTTEEREPV-GIELPEIGRIRSFSLSFRQQNS-SFRSNSAAAVVDEDERDTVDASLWA 60
           MAPTTEEREP   IE+ E+GR RSFS SFRQQ S SFRS+S+ A   E++ D  +AS+WA
Sbjct: 6   MAPTTEEREPARTIEVVEMGRRRSFSSSFRQQTSLSFRSSSSVAA--EEDGDAEEASVWA 65

Query: 61  AVERLPTLERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLK 120
           A+ERLPT ERLRSSLFD   GVE +EK GRRVVDV KL DVER LFIQKLIKHIENDNL+
Sbjct: 66  AIERLPTFERLRSSLFD--SGVEEKEK-GRRVVDVAKLRDVERRLFIQKLIKHIENDNLR 125

Query: 121 LLTKIKERIHE 130
           LLTK++ERIH+
Sbjct: 126 LLTKVRERIHK 131

[Close]

BLAST of HG10006850 vs. ExPASy TrEMBL
Match: A0A6J1J0E0 (pleiotropic drug resistance protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481557 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.1e-26
Identity = 79/130 (60.77%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 1   MAPTTEEREPVG-IELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAA 60
           M P T+E+E    IE+ EIGR RSFS       SSF   S A   D+D+ D  D SLW +
Sbjct: 1   MNPKTKEKEGGRMIEVGEIGRRRSFS-------SSFGRRSVAVEDDDDDGDIKDVSLWTS 60

Query: 61  VERLPTLERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKL 120
           +ERLPT ERLRSSLFDD  G    E   R VVDVTKLGD ERHLFIQ LIKHIENDN KL
Sbjct: 61  IERLPTFERLRSSLFDDARG----EAERRVVVDVTKLGDEERHLFIQNLIKHIENDNHKL 119

Query: 121 LTKIKERIHE 130
           L K+KERIH+
Sbjct: 121 LRKVKERIHK 119

[Close]

BLAST of HG10006850 vs. TAIR 10
Match: AT3G53480.1 (pleiotropic drug resistance 9 )

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-27
Identity = 71/126 (56.35%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 6   EEREPVGIELPEIGRIRSFSLSFRQQNSSFRSNSAAAVVDED----ERDTVDASLWAAVE 65
           ++ E + +EL EIG  RS   SFR+  SSFRS+S+   V+ D    + D   A  WA +E
Sbjct: 8   DDIESLRVELAEIG--RSIRSSFRRHTSSFRSSSSIYEVENDGDVNDHDAEYALQWAEIE 67

Query: 66  RLPTLERLRSSLFDDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLT 125
           RLPT++R+RS+L DD  G E   + GRRVVDVTKLG VERHL I+KLIKHIENDNLKLL 
Sbjct: 68  RLPTVKRMRSTLLDD--GDESMTEKGRRVVDVTKLGAVERHLMIEKLIKHIENDNLKLLK 127

Query: 126 KIKERI 128
           KI+ RI
Sbjct: 128 KIRRRI 129

[Close]

BLAST of HG10006850 vs. TAIR 10
Match: AT2G37280.1 (pleiotropic drug resistance 5 )

HSP 1 Score: 95.1 bits (235), Expect = 4.3e-20
Identity = 55/95 (57.89%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 33  SSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLFDDIGGVEVEEKGGRRVVD 92
           SSFRS+S+    ++   +   A  WA ++RLPT +RLRSSL D  G  E  EK G++VVD
Sbjct: 3   SSFRSSSSRNEHEDGGDEAEHALQWAEIQRLPTFKRLRSSLVDKYG--EGTEK-GKKVVD 62

Query: 93  VTKLGDVERHLFIQKLIKHIENDNLKLLTKIKERI 128
           VTKLG +ERHL I+KLIKHIENDNLKLL KI+ R+
Sbjct: 63  VTKLGAMERHLMIEKLIKHIENDNLKLLKKIRRRM 94

[Close]

BLAST of HG10006850 vs. TAIR 10
Match: AT4G15233.1 (ABC-2 and Plant PDR ABC-type transporter family protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 55  SLWAAVERLPTLERLRSSLF---DDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKH 114
           S W A+ER PT ER+ ++LF   D+ G     +K  RRV+DV+KL D++R LFI  LI+H
Sbjct: 29  SQWVAIERSPTFERITTALFCKRDEKG-----KKSQRRVMDVSKLDDLDRRLFIDDLIRH 88

Query: 115 IENDNLKLLTKIKERIHE 130
           +ENDN  LL KI++RI E
Sbjct: 89  VENDNHVLLQKIRKRIDE 101

[Close]

BLAST of HG10006850 vs. TAIR 10
Match: AT4G15233.2 (ABC-2 and Plant PDR ABC-type transporter family protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0


Query: 55  SLWAAVERLPTLERLRSSLF---DDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKH 114
           S W A+ER PT ER+ ++LF   D+ G     +K  RRV+DV+KL D++R LFI  LI+H
Sbjct: 29  SQWVAIERSPTFERITTALFCKRDEKG-----KKSQRRVMDVSKLDDLDRRLFIDDLIRH 88

Query: 115 IENDNLKLLTKIKERIHE 130
           +ENDN  LL KI++RI E
Sbjct: 89  VENDNHVLLQKIRKRIDE 101

[Close]

BLAST of HG10006850 vs. TAIR 10
Match: AT4G15215.1 (pleiotropic drug resistance 13 )

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 0


Query: 17  EIGRIRSFSLSFRQQNSSFRSNSAAAVVDEDERDTVDASLWAAVERLPTLERLRSSLF-- 76
           ++ + +SF + F   N           VD++E+     S WA VERLPT +R+ ++L   
Sbjct: 7   DVDKAKSFQVEFACGNG----------VDDEEK---LRSQWATVERLPTFKRVTTALLHT 66

Query: 77  -DDIGGVEVEEKGGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLLTKIKERIHE 130
            DD             ++DVTKL D ER L I+KL+K IE DNL+LL KI++RI E
Sbjct: 67  GDD----------SSDIIDVTKLEDAERRLLIEKLVKQIEADNLRLLRKIRKRIDE 99

The following BLAST results are available for this feature:

BLAST of HG10006850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892176.1	6.6e-47	80.00	pleiotropic drug resistance protein 3-like [Benincasa hispida]	[more]
XP_031741892.1	4.7e-45	79.84	pleiotropic drug resistance protein 3 isoform X2 [Cucumis sativus]	[more]
XP_031745924.1	4.7e-45	79.84	ABC transporter G family member 37-like [Cucumis sativus]	[more]
KAE8637316.1	4.7e-45	79.84	hypothetical protein CSA_019102, partial [Cucumis sativus]	[more]
XP_004140460.1	4.7e-45	79.84	pleiotropic drug resistance protein 3 isoform X1 [Cucumis sativus] >KGN50690.2 h...	[more]

BLAST of HG10006850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFH0	5.1e-26	56.35	ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=...	[more]
Q5W274	5.1e-26	54.84	Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 ...	[more]
Q9ZUT8	6.1e-19	57.89	ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=...	[more]
Q7PC82	2.5e-12	51.28	ABC transporter G family member 42 OS=Arabidopsis thaliana OX=3702 GN=ABCG42 PE=...	[more]
Q7PC83	2.3e-10	38.79	ABC transporter G family member 41 OS=Arabidopsis thaliana OX=3702 GN=ABCG41 PE=...	[more]

BLAST of HG10006850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMI3	2.3e-45	79.84	ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G29...	[more]
A0A5D3CR38	1.6e-43	77.60	Pleiotropic drug resistance protein 3-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3C5F9	1.6e-43	77.60	LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like OS=Cucumis melo ...	[more]
A0A6J1DJT5	1.6e-35	70.99	pleiotropic drug resistance protein 3-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1J0E0	1.1e-26	60.77	pleiotropic drug resistance protein 3-like isoform X1 OS=Cucurbita maxima OX=366...	[more]

BLAST of HG10006850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53480.1	3.6e-27	56.35	pleiotropic drug resistance 9	[more]
AT2G37280.1	4.3e-20	57.89	pleiotropic drug resistance 5	[more]
AT4G15233.1	1.8e-13	51.28	ABC-2 and Plant PDR ABC-type transporter family protein	[more]
AT4G15233.2	1.8e-13	51.28	ABC-2 and Plant PDR ABC-type transporter family protein	[more]
AT4G15215.1	1.6e-11	38.79	pleiotropic drug resistance 13	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19241	ATP-BINDING CASSETTE TRANSPORTER	coord: 28..128
None	No IPR available	PANTHER	PTHR19241:SF628	ABC TRANSPORTER G FAMILY MEMBER 33	coord: 28..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006850.1	HG10006850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding