HG10005833 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10005833
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncysteine proteinase inhibitor A-like
LocationChr07: 6726468 .. 6726806 (+)
RNA-Seq ExpressionHG10005833
SyntenyHG10005833
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGTGTGCCTGAAGATGACCATTCTTTAAAGCCAATTGTGGATATCAATGAAGAATTTGTGCAAAATGTTGGAAAGTTGGCAGTAAATCATTATAACAATACGACGAAAAGTGAAAATAATGTCAAGTTCACGCGCGTGGTGAATGGTTTGAGTGGGGGTGTTCTTTTCTCCTTCACTGGTGTGTTATTTGAACTAGTGGTAGAGGTTAAAGAAGATGAATTTAATAGTTCATATATTGCAAAGGTGAAGGCCCGTCAGCTATCTTTACGTGAATTCGTCCCTATAAGCTATGAATTCATATCTTTCGAGCCTGTTCTCAAGTACAAGAAGTAA

mRNA sequence

ATGAGTTGTGTGCCTGAAGATGACCATTCTTTAAAGCCAATTGTGGATATCAATGAAGAATTTGTGCAAAATGTTGGAAAGTTGGCAGTAAATCATTATAACAATACGACGAAAAGTGAAAATAATGTCAAGTTCACGCGCGTGGTGAATGGTTTGAGTGGGGGTGTTCTTTTCTCCTTCACTGGTGTGTTATTTGAACTAGTGGTAGAGGTTAAAGAAGATGAATTTAATAGTTCATATATTGCAAAGGTGAAGGCCCGTCAGCTATCTTTACGTGAATTCGTCCCTATAAGCTATGAATTCATATCTTTCGAGCCTGTTCTCAAGTACAAGAAGTAA

Coding sequence (CDS)

ATGAGTTGTGTGCCTGAAGATGACCATTCTTTAAAGCCAATTGTGGATATCAATGAAGAATTTGTGCAAAATGTTGGAAAGTTGGCAGTAAATCATTATAACAATACGACGAAAAGTGAAAATAATGTCAAGTTCACGCGCGTGGTGAATGGTTTGAGTGGGGGTGTTCTTTTCTCCTTCACTGGTGTGTTATTTGAACTAGTGGTAGAGGTTAAAGAAGATGAATTTAATAGTTCATATATTGCAAAGGTGAAGGCCCGTCAGCTATCTTTACGTGAATTCGTCCCTATAAGCTATGAATTCATATCTTTCGAGCCTGTTCTCAAGTACAAGAAGTAA

Protein sequence

MSCVPEDDHSLKPIVDINEEFVQNVGKLAVNHYNNTTKSENNVKFTRVVNGLSGGVLFSFTGVLFELVVEVKEDEFNSSYIAKVKARQLSLREFVPISYEFISFEPVLKYKK
Homology
BLAST of HG10005833 vs. NCBI nr
Match: KGN54823.1 (hypothetical protein Csa_012607 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 7.6e-07
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 0

Query: 4   VPEDDHSLKPIVDINEEFVQNVGKLAVNHYNNTTKSENNVKFTRVVNGLSGGVLF--SFT 63
           + E  H LKPI+DIN+  VQ +G+LAV +  +    E  +KF RVVNGL         FT
Sbjct: 3   IEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGE-KLKFVRVVNGLKSDKYIGPGFT 62

Query: 64  GV-LFELVVEVK-EDEFNSSYIAKVKARQLSLREFVPISYEFISFEPVLKYKK 113
            V L+ LV+E K  +E N +Y  K++     L     I + F+SFEPVL Y K
Sbjct: 63  EVILYHLVLEAKTNEEINWTYATKLEEVSGGL-----IRHVFLSFEPVLPYYK 109

BLAST of HG10005833 vs. NCBI nr
Match: KAE8649716.1 (hypothetical protein Csa_012476 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 9.9e-07
Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = 0

Query: 12  KPIVDINEEFVQNVGKLAVNHYNNTTKSENNVKFTRVVNGLSGGVLFSFT---GVLFELV 71
           +PI DIN+  VQ +G L V+ +N   K+  N+KF RVVNGL  G +  F+   G ++ELV
Sbjct: 8   EPIKDINDPQVQEIGNLTVDDHNK--KTGENLKFVRVVNGLFAGFVDPFSPLGGTVYELV 67

Query: 72  VE-VKEDEFNSSYIAKVKARQLSLREFVPISYEFISFEPVLKYKK 113
           +E +   + N +Y  KV A   ++R  + + Y F SFEPVL+Y++
Sbjct: 68  LEAINAGKINWTYKVKVSA-STTIRP-LGVVYNFQSFEPVLQYEE 108

BLAST of HG10005833 vs. NCBI nr
Match: XP_008442277.1 (PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo] >KAA0041897.1 cysteine proteinase inhibitor A-like [Cucumis melo var. makuwa] >TYK05422.1 cysteine proteinase inhibitor A-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 4.2e-05
Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 10  SLKPIVDINEEF-VQNVGKLAVNHYNNTTKSENNVKFTRVVNGLSGGV---LFSFTGVLF 69
           + KPI DIN+   VQ++G L V+ +N   K+  N+KF RVVNGL+      +    GVL+
Sbjct: 6   AFKPIEDINDNLEVQDLGNLTVDDHNK--KTGENLKFVRVVNGLAASFSDPISPLGGVLY 65

Query: 70  ELVVE-VKEDEFNSSYIAKVKARQLSLREFVPISYEFISFEPVLKYK 112
           ELV+E +   + N +Y A+V   +     F  + Y F SF+PVL+Y+
Sbjct: 66  ELVLEAITTSKINWTYKARVSKSKAITPPF-HMLYSFQSFKPVLEYE 109

BLAST of HG10005833 vs. ExPASy TrEMBL
Match: A0A0A0L191 (Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G508520 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-07
Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 0

Query: 4   VPEDDHSLKPIVDINEEFVQNVGKLAVNHYNNTTKSENNVKFTRVVNGLSGGVLF--SFT 63
           + E  H LKPI+DIN+  VQ +GKLAV  +++    E  +KF RVVNGL         FT
Sbjct: 3   IEEIHHRLKPIIDINDPHVQIIGKLAVEDHDSHNPGE-KLKFVRVVNGLKSDKYIGPGFT 62

Query: 64  GV-LFELVVEVK-EDEFNSSYIAKVKARQLSLREFVPISYEFISFEPVLKYKK 113
            V L+ LV+E K  +E N +Y  K++     +     I + F+SFEPVL Y K
Sbjct: 63  EVILYHLVLEAKTNEEINWTYATKLE----KVYSGCLIRHVFLSFEPVLPYNK 110

BLAST of HG10005833 vs. ExPASy TrEMBL
Match: A0A0A0KZ98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508510 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.7e-07
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 0

Query: 4   VPEDDHSLKPIVDINEEFVQNVGKLAVNHYNNTTKSENNVKFTRVVNGLSGGVLF--SFT 63
           + E  H LKPI+DIN+  VQ +G+LAV +  +    E  +KF RVVNGL         FT
Sbjct: 3   IEESRHRLKPIIDINDPHVQALGELAVENLYSKNSGE-KLKFVRVVNGLKSDKYIGPGFT 62

Query: 64  GV-LFELVVEVK-EDEFNSSYIAKVKARQLSLREFVPISYEFISFEPVLKYKK 113
            V L+ LV+E K  +E N +Y  K++     L     I + F+SFEPVL Y K
Sbjct: 63  EVILYHLVLEAKTNEEINWTYATKLEEVSGGL-----IRHVFLSFEPVLPYYK 109

BLAST of HG10005833 vs. ExPASy TrEMBL
Match: A0A0A0L3W1 (Proteinase inhibitor I25, cystatin OS=Cucumis sativus OX=3659 GN=Csa_4G508490 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-06
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 0

Query: 4   VPEDDHSLKPIVDINEEF-VQN-VGKLAVNHYNNTTKSENNVKFTRVVNGLSGGVLF--- 63
           V E  H+ KPI DIN++  VQ+ +G+LAV  +N   K+ +N++   VVNGL  G+     
Sbjct: 12  VEEAYHTSKPIEDINDDLQVQSIIGQLAVEDHNK--KTGDNLELVDVVNGLRSGIFVQPG 71

Query: 64  -SFTGVLFELVVEVKEDE-FNSSYIAKVKARQLSLREFVPISYEFISFEPVLKY 111
            +  G+L+ L+VE K  E  N +Y+AK+    +  R    I YEF SFEP+L Y
Sbjct: 72  STHEGILYHLLVEAKTIEGINWTYVAKLLELYVGCR----IRYEFKSFEPLLPY 119

BLAST of HG10005833 vs. ExPASy TrEMBL
Match: A0A5A7TJK0 (Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001140 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-05
Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 10  SLKPIVDINEEF-VQNVGKLAVNHYNNTTKSENNVKFTRVVNGLSGGV---LFSFTGVLF 69
           + KPI DIN+   VQ++G L V+ +N   K+  N+KF RVVNGL+      +    GVL+
Sbjct: 6   AFKPIEDINDNLEVQDLGNLTVDDHNK--KTGENLKFVRVVNGLAASFSDPISPLGGVLY 65

Query: 70  ELVVE-VKEDEFNSSYIAKVKARQLSLREFVPISYEFISFEPVLKYK 112
           ELV+E +   + N +Y A+V   +     F  + Y F SF+PVL+Y+
Sbjct: 66  ELVLEAITTSKINWTYKARVSKSKAITPPF-HMLYSFQSFKPVLEYE 109

BLAST of HG10005833 vs. ExPASy TrEMBL
Match: A0A1S3B5B9 (cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-05
Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 10  SLKPIVDINEEF-VQNVGKLAVNHYNNTTKSENNVKFTRVVNGLSGGV---LFSFTGVLF 69
           + KPI DIN+   VQ++G L V+ +N   K+  N+KF RVVNGL+      +    GVL+
Sbjct: 6   AFKPIEDINDNLEVQDLGNLTVDDHNK--KTGENLKFVRVVNGLAASFSDPISPLGGVLY 65

Query: 70  ELVVE-VKEDEFNSSYIAKVKARQLSLREFVPISYEFISFEPVLKYK 112
           ELV+E +   + N +Y A+V   +     F  + Y F SF+PVL+Y+
Sbjct: 66  ELVLEAITTSKINWTYKARVSKSKAITPPF-HMLYSFQSFKPVLEYE 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN54823.17.6e-0741.59hypothetical protein Csa_012607 [Cucumis sativus][more]
KAE8649716.19.9e-0740.95hypothetical protein Csa_012476 [Cucumis sativus][more]
XP_008442277.14.2e-0539.25PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo] >KAA0041897.1 cys... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L1911.6e-0741.59Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G508520 PE... [more]
A0A0A0KZ983.7e-0741.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G508510 PE=4 SV=1[more]
A0A0A0L3W12.4e-0640.35Proteinase inhibitor I25, cystatin OS=Cucumis sativus OX=3659 GN=Csa_4G508490 PE... [more]
A0A5A7TJK02.0e-0539.25Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3B5B92.0e-0539.25cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 10..107
e-value: 6.3E-10
score: 40.9
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 18..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10005833.1HG10005833.1mRNA