HG10004489 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTCACTCTCTGCAGCAGAGTTGTGACTCCATTGACATCGTCGTTTGCGTTACGACGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTCGGAATCACCAATCTCTTAGTCTCCAAAACGGGTTCGGCTCTGTCTCTGCCTTTCGCTCCTCTCTTGAGGTACTTCTTTTCGCTTCCTTGCTTTCTTTCTTGATCAATTTCTTCTACGACTGTTTCTTTCTGTGAATTTGCTTTAGTTACTGGTTAATTTGTTTAGGTTATTAGTTTGATCCGTATTCGTGTTGGTTTGCTAATGGAAAAACTATGTCAATCGAAGTTTGCTGGTCAAGGACCAGCGAGGAACGTACATTTGATAAAAATGGAAGGGAGTAGTGCTGCAGTGCCTAGCATTGTTGTTTATGTCACCGTTCCTAACAGGGAAGCAGGTTCTCTTTTATCTATCTGCTCTAGAAGTCTCGCGCTCTTTGTGGTTTTGAATTCATTGATCATTTCCTGGTATTTTGAGCATGTGAACAAACTATAATCGGATTAGAATTGATATTTTTAGTAGCTATATTTTATTTCATTTTTTGAGGTTTCCAGTATCTTGTGTACGGAAAAACTTGGTTTCTCTTTTATTAATCTAGTGACCAATGAATCGGGCTCTTCTAGCAGCGGTATATACACTTTGTTTGATAGTAACCTAGACCATATTGATCAAGTAGTATGGGAAATTGGGAATTTACGATATGGTTTCAGCATTTTACTTGTTATGCTAGTCACGTCTTTACTGTAAGGAGAGTTTTTGGAGGAAACTTATGTTGATGGTGTTGAGTGTTGATAGGATCATCTTGATTATTAGTTAGATACATATACTTGGCGCATTGACTAATAATTACCAGACTCGATAAGCAAATGATGGATTATATTATAACTCAAGAAATGCTCTAATGTTATTATATTGGATATACTATTGTTGAATATGTAGCATGTGTTCCTACTCCTAGCATACTCACTTGGATGATTAATGTTCTGAGATAGTAAGGGCCTATTTGGTATGTTATATGTTTTCAAATTCACCAAGCTAAATGGATTCAACGAAGATTTGTTTGATATATAATAAGTTATGTCTTACTGTAAAATAATATTTATACAAAATTTTGGACATAAAACATGTTTCATAAATTAATTAGTAATAATTGAGGTACGACCTAATATTTAGTTGGTAACTAAGTAGAACTATGTTTTATAAATATATTATAACACATTTTCTCCAAATTTTAAAATTGGGATCCAATTGCAAAACCTGTTACCAAATACATAATAAAAAAGATTGAAAACATGAAATACCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAATTGAATTTTTGTTTTATATCACCCAACATGTCCTAAGCTTTTGGAAAGGTTACCCGAGAGTACAGAATTGCTACGTTTTTTGCTACCCCTACAAAAAATTTAACAAATTTGTATACATTTTTGGGGGGCATGAGGCCATTTGTTTTCGTTGTTGTTATTGTTATTATTGTTTTTTTTTGTTATTTCAGTTTCAACTTCTTTGTTTCCCTTTTAGATCTGTGCTAACAGAACTAGTCCGATCCAATGTTTTGTATTTCAATTGCATTAGGTTACCTTGTTGTTTCTGTTGTGTCCACGTACATTTATTTATTTTTCAAAATGTAAATGATATATCTAACCTTGTACTTAAGTATATAGCAAGCATTGGATTGATGTTGCCCAAGCTTAAGTATAGTGTGTTTCATAAGACTCAGCGTTGGATTCCGTACTATGGGATTTACTTCTCTTTAGTAGATGTTATGTTTCTAATCTCACTCATTCACGTTATTTCTGCAGGTAAGAAACTGGCTGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCTGGTATGTGCATCTTCTCAACCTCTGCTCGTCATCTTAATGTGACAGAATGCATTGCTCACGGTTTGGAAAAGATATTATGTCAACAATATTTATAATCCATGCTTGCAGAACATCTGATATTCTCGTTTAAGTTTTCAATGCATATCAACAAAGTTGCTTCTAACTATTTAAAACCTTAAATTGAAGCTTACTGGATCTTCCCTGTAACATTTCATTGCTGTTTTTTAGTGAAGGAAAGTCGTTAGAAATAGTTACTTGTCAGTTGGGAACAAAAGAAAATTTCTTTTGACCCGTTGACTCTTTAGATCTTGTGATGTCACAAACAGAAGTGATGCTTCAAGATGCTCCACATCCCTGTTTATTGTTCAATTTCAAACCACTGAATTCTTTTTCTTTTAGAGATTACTTTTCATTTTCTTATGTGAATATGAATTCTCAGACTTTTAAGTTCTAATGAATACTTTACAAATGCAGGCATAGAATCTGTTTACCAGTGGAAGGGAGAGGTATGGTTCTCATTTTCATAAATTGATATATAGTTATCACGAACAAAAAGAACTATAGGCTTTCTGTTTCTGGTTGACACAGATCCAGACAGACCCTGAGGAACTTCTGATTATTAAGACCAGGCAATCACTTCTGGGAGCACTGACAGATCATGTAAAGGCAAATCACCCATACGAGTAAGCCTAATATTCATTATTTGTTTTTGTCTGTTTTTTGTCTTCCGTTTTGTTTTGTTTCGGGTTTGTTAGTTTTTTGGGTGCATGTGTTTTTATTTTTCAATATTGGGGGAAGAATGGAGCGGAAGGGAAACTCAATAGAGTTGTGAATTGTGAACGGTTTCGCTTATGAGCTAGACATTTAGGGGGCATGTGGGGCAAGGAGTGGAGGTGTGAAGTCCCGAGTCCATAGTGTAAGGAGTTAATAAGGTATAAATTAATTGATGTTTTTTAGTAGTGGGATCCACGAACTCCTTGGGTCAAACAAGGAGTGGAGTTCACAACTCCTTACTTCCCAACTCTTTGGACCAAACGCCCCCTTAAGGTTTTTTTGGACGATATTTTTATTTTGTTAACCATATCCATTTGCTTTTTTTCCTGATTTACTCGTGTACTTTCAGGAATGTATTTCCAATCTTAGCTAAAATTTGAAACCTAGTTAAAAAATAGTTTTTAAAACTTTATTTTTATCATTGAAATTAGACTAAATTTGTAGTATCTTTGGAGTGAAAAACCAAACGAAGAGCTGCATAAGTAGCAGAATCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAGAAACCATTAAAAGCCAAATTTTGGCCTCTCCAAGGATTTACCTCCATTTTTTATGCAGGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCCTCGAGTACCTAGAGTGGATCAAGAGCAGCACAAAGGACTGA ATGGCTTTCACTCTCTGCAGCAGAGTTGTGACTCCATTGACATCGTCGTTTGCGTTACGACGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTCGGAATCACCAATCTCTTAGTCTCCAAAACGGGTTCGGCTCTGTCTCTGCCTTTCGCTCCTCTCTTGAGTTTGATCCGTATTCGTGTTGGTTTGCTAATGGAAAAACTATGTCAATCGAAGTTTGCTGGTCAAGGACCAGCGAGGAACGTACATTTGATAAAAATGGAAGGGAGTAGTGCTGCAGTGCCTAGCATTGTTGTTTATGTCACCGTTCCTAACAGGGAAGCAGGTAAGAAACTGGCTGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCTGGCATAGAATCTGTTTACCAGTGGAAGGGAGAGATCCAGACAGACCCTGAGGAACTTCTGATTATTAAGACCAGGCAATCACTTCTGGGAGCACTGACAGATCATGTAAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCCTCGAGTACCTAGAGTGGATCAAGAGCAGCACAAAGGACTGA ATGGCTTTCACTCTCTGCAGCAGAGTTGTGACTCCATTGACATCGTCGTTTGCGTTACGACGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTCGGAATCACCAATCTCTTAGTCTCCAAAACGGGTTCGGCTCTGTCTCTGCCTTTCGCTCCTCTCTTGAGTTTGATCCGTATTCGTGTTGGTTTGCTAATGGAAAAACTATGTCAATCGAAGTTTGCTGGTCAAGGACCAGCGAGGAACGTACATTTGATAAAAATGGAAGGGAGTAGTGCTGCAGTGCCTAGCATTGTTGTTTATGTCACCGTTCCTAACAGGGAAGCAGGTAAGAAACTGGCTGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCTGGCATAGAATCTGTTTACCAGTGGAAGGGAGAGATCCAGACAGACCCTGAGGAACTTCTGATTATTAAGACCAGGCAATCACTTCTGGGAGCACTGACAGATCATGTAAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCCTCGAGTACCTAGAGTGGATCAAGAGCAGCACAAAGGACTGA MAFTLCSRVVTPLTSSFALRRRLPLVGAFCVLSFGITNLLVSKTGSALSLPFAPLLSLIRIRVGLLMEKLCQSKFAGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESVYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTKD Homology
BLAST of HG10004489 vs. NCBI nr
Match: XP_004152609.1 (protein CutA, chloroplastic [Cucumis sativus] >KGN62736.1 hypothetical protein Csa_022362 [Cucumis sativus]) HSP 1 Score: 332.0 bits (850), Expect = 3.5e-87 Identity = 174/200 (87.00%), Postives = 178/200 (89.00%), Query Frame = 0
BLAST of HG10004489 vs. NCBI nr
Match: XP_038886215.1 (protein CutA, chloroplastic [Benincasa hispida] >XP_038886216.1 protein CutA, chloroplastic [Benincasa hispida]) HSP 1 Score: 331.6 bits (849), Expect = 4.6e-87 Identity = 173/200 (86.50%), Postives = 176/200 (88.00%), Query Frame = 0
BLAST of HG10004489 vs. NCBI nr
Match: XP_008444893.1 (PREDICTED: protein CutA, chloroplastic [Cucumis melo]) HSP 1 Score: 331.3 bits (848), Expect = 5.9e-87 Identity = 173/200 (86.50%), Postives = 177/200 (88.50%), Query Frame = 0
BLAST of HG10004489 vs. NCBI nr
Match: KAA0065110.1 (protein CutA [Cucumis melo var. makuwa]) HSP 1 Score: 328.9 bits (842), Expect = 3.0e-86 Identity = 173/200 (86.50%), Postives = 176/200 (88.00%), Query Frame = 0
BLAST of HG10004489 vs. NCBI nr
Match: XP_023545579.1 (protein CutA, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 324.7 bits (831), Expect = 5.6e-85 Identity = 170/200 (85.00%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of HG10004489 vs. ExPASy Swiss-Prot
Match: P93009 (Protein CutA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CUTA PE=1 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.4e-51 Identity = 116/200 (58.00%), Postives = 143/200 (71.50%), Query Frame = 0
BLAST of HG10004489 vs. ExPASy Swiss-Prot
Match: Q109R6 (Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CUTA1 PE=1 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 4.1e-46 Identity = 95/155 (61.29%), Postives = 118/155 (76.13%), Query Frame = 0
BLAST of HG10004489 vs. ExPASy Swiss-Prot
Match: O60888 (Protein CutA OS=Homo sapiens OX=9606 GN=CUTA PE=1 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 2.5e-27 Identity = 68/171 (39.77%), Postives = 105/171 (61.40%), Query Frame = 0
BLAST of HG10004489 vs. ExPASy Swiss-Prot
Match: P69678 (Protein CutA OS=Bos taurus OX=9913 GN=CUTA PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.0e-25 Identity = 70/165 (42.42%), Postives = 102/165 (61.82%), Query Frame = 0
BLAST of HG10004489 vs. ExPASy Swiss-Prot
Match: Q6MGD0 (Protein CutA OS=Rattus norvegicus OX=10116 GN=Cuta PE=1 SV=2) HSP 1 Score: 118.2 bits (295), Expect = 1.0e-25 Identity = 70/175 (40.00%), Postives = 102/175 (58.29%), Query Frame = 0
BLAST of HG10004489 vs. ExPASy TrEMBL
Match: A0A0A0LRU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370360 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.7e-87 Identity = 174/200 (87.00%), Postives = 178/200 (89.00%), Query Frame = 0
BLAST of HG10004489 vs. ExPASy TrEMBL
Match: A0A1S3BBF3 (protein CutA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488107 PE=3 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 2.9e-87 Identity = 173/200 (86.50%), Postives = 177/200 (88.50%), Query Frame = 0
BLAST of HG10004489 vs. ExPASy TrEMBL
Match: A0A5A7VD29 (Protein CutA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004450 PE=3 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86 Identity = 173/200 (86.50%), Postives = 176/200 (88.00%), Query Frame = 0
BLAST of HG10004489 vs. ExPASy TrEMBL
Match: A0A6J1K4I7 (protein CutA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492224 PE=3 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 7.8e-85 Identity = 169/200 (84.50%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of HG10004489 vs. ExPASy TrEMBL
Match: A0A6J1BS17 (protein CutA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005035 PE=3 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 3.3e-83 Identity = 164/200 (82.00%), Postives = 175/200 (87.50%), Query Frame = 0
BLAST of HG10004489 vs. TAIR 10
Match: AT2G33740.2 (Nitrogen regulatory PII-like, alpha/beta ) HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52 Identity = 116/200 (58.00%), Postives = 143/200 (71.50%), Query Frame = 0
BLAST of HG10004489 vs. TAIR 10
Match: AT2G33740.1 (Nitrogen regulatory PII-like, alpha/beta ) HSP 1 Score: 164.1 bits (414), Expect = 1.2e-40 Identity = 98/174 (56.32%), Postives = 119/174 (68.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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