HG10004196 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004196
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Phenylalanine ammonia-lyase
Location	Chr08: 14653816 .. 14654226 (-)
RNA-Seq Expression	HG10004196
Synteny	HG10004196

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTCCATCCGGAAAATGGCAACCATGGATGGCCGAAGGAGCCCTCTTTGTGCGGTGGCGTGGCGGCGTATTGGAGCGGTGCGGCGGAGGGGCTCGAGCGGAGTCATTTGGAGGAGTTTAAACATATGGTGGCAGAATTTTGTCGCCCTATTGTACGACTTGGGGGCGAGAGCCTCACGATAGCGCAAGTTGCTGCCATTGCTGCTCGTGCCTCTGATGTTGTGGTGGAGCTGTCTGAGGAAGCTCGCCCTGGTGTAGAGGCGAGTAGTAGGTGGGTTGTTAAAAGCATGACTAATGGAACCGATAGTTATGGTGTTACGACTGGTTTTGGTTCTACGTCGCATCGAAGGACTGACCAAGGAGAAGCCCTTCAGAAAGAGCTCATTAGGTGGATTACTCCTTCTTAA

mRNA sequence

ATGGAATTCCATCCGGAAAATGGCAACCATGGATGGCCGAAGGAGCCCTCTTTGTGCGGTGGCGTGGCGGCGTATTGGAGCGGTGCGGCGGAGGGGCTCGAGCGGAGTCATTTGGAGGAGTTTAAACATATGGTGGCAGAATTTTGTCGCCCTATTGTACGACTTGGGGGCGAGAGCCTCACGATAGCGCAAGTTGCTGCCATTGCTGCTCGTGCCTCTGATGTTGTGGTGGAGCTGTCTGAGGAAGCTCGCCCTGGTGTAGAGGCGAGTAGTAGGTGGGTTGTTAAAAGCATGACTAATGGAACCGATAGTTATGGTGTTACGACTGGTTTTGGTTCTACGTCGCATCGAAGGACTGACCAAGGAGAAGCCCTTCAGAAAGAGCTCATTAGGTGGATTACTCCTTCTTAA

Coding sequence (CDS)

ATGGAATTCCATCCGGAAAATGGCAACCATGGATGGCCGAAGGAGCCCTCTTTGTGCGGTGGCGTGGCGGCGTATTGGAGCGGTGCGGCGGAGGGGCTCGAGCGGAGTCATTTGGAGGAGTTTAAACATATGGTGGCAGAATTTTGTCGCCCTATTGTACGACTTGGGGGCGAGAGCCTCACGATAGCGCAAGTTGCTGCCATTGCTGCTCGTGCCTCTGATGTTGTGGTGGAGCTGTCTGAGGAAGCTCGCCCTGGTGTAGAGGCGAGTAGTAGGTGGGTTGTTAAAAGCATGACTAATGGAACCGATAGTTATGGTGTTACGACTGGTTTTGGTTCTACGTCGCATCGAAGGACTGACCAAGGAGAAGCCCTTCAGAAAGAGCTCATTAGGTGGATTACTCCTTCTTAA

Protein sequence

MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWITPS

Homology

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BLAST of HG10004196 vs. NCBI nr
Match: XP_008456500.1 (PREDICTED: phenylalanine ammonia-lyase G4 [Cucumis melo] >KAA0036480.1 phenylalanine ammonia-lyase G4 [Cucumis melo var. makuwa] >TYK00009.1 phenylalanine ammonia-lyase G4 [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 2.0e-57
Identity = 119/134 (88.81%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 1   MEFHPENGNHGWPK-EPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGES 60
           ME  PENGNHGWPK EPSLCGGVAAYWSGAA+GLE SHLEEFK MV EF RPIVRLGGES
Sbjct: 1   MEPRPENGNHGWPKAEPSLCGGVAAYWSGAAKGLEGSHLEEFKRMVMEFRRPIVRLGGES 60

Query: 61  LTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRT 120
           LTIAQVAAIAAR+SDVVVELSEE+R  VEASSRWVV+SMTNGTDSYGVTTGFGSTSHRRT
Sbjct: 61  LTIAQVAAIAARSSDVVVELSEESRSAVEASSRWVVESMTNGTDSYGVTTGFGSTSHRRT 120

Query: 121 DQGEALQKELIRWI 134
           DQGEALQKELIR++
Sbjct: 121 DQGEALQKELIRFL 134

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BLAST of HG10004196 vs. NCBI nr
Match: XP_004149916.1 (phenylalanine ammonia-lyase G4 [Cucumis sativus] >KGN47834.1 hypothetical protein Csa_002790 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 6.3e-56
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESL 60
           ME  PENG+HGW KEPSLC GVAAYWSGAA+GLE SHLEEFK MV EF R +VRLGGESL
Sbjct: 1   MEPRPENGHHGWEKEPSLCAGVAAYWSGAAKGLEGSHLEEFKRMVMEFRRSVVRLGGESL 60

Query: 61  TIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTD 120
           TIAQVAAIAAR+SDVVVELSEEAR  VEASSRWVV+SMTNGTDSYGVTTGFGSTSHRRTD
Sbjct: 61  TIAQVAAIAARSSDVVVELSEEARSAVEASSRWVVESMTNGTDSYGVTTGFGSTSHRRTD 120

Query: 121 QGEALQKELIRWI 134
           QGEALQKELIR++
Sbjct: 121 QGEALQKELIRFL 133

[Close]

BLAST of HG10004196 vs. NCBI nr
Match: XP_038883983.1 (phenylalanine ammonia-lyase G4-like [Benincasa hispida])

HSP 1 Score: 213.8 bits (543), Expect = 9.4e-52
Identity = 108/128 (84.38%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 6   ENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQV 65
           ENGN GW K PSLCGGVAAYW+ AA GLE SHLEEFK MV EF RPIV+LGGESLTIA V
Sbjct: 6   ENGNLGWAKNPSLCGGVAAYWNDAAGGLEGSHLEEFKRMVVEFRRPIVQLGGESLTIAHV 65

Query: 66  AAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEAL 125
           AAIAAR SDV+VELSEEARP VEASSRWV KS+TNGTDSYGVTTGFGSTSHRRTDQGE L
Sbjct: 66  AAIAARGSDVMVELSEEARPAVEASSRWVFKSITNGTDSYGVTTGFGSTSHRRTDQGETL 125

Query: 126 QKELIRWI 134
           QKELIR++
Sbjct: 126 QKELIRFL 133

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BLAST of HG10004196 vs. NCBI nr
Match: KAG5515527.1 (hypothetical protein RHGRI_036534 [Rhododendron griersonianum])

HSP 1 Score: 164.1 bits (414), Expect = 8.5e-37
Identity = 90/134 (67.16%), Postives = 102/134 (76.12%), Query Frame = 0


Query: 1   MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESL 60
           ME   +NGN   PK  SLC      W  AAE L+ SHL+E K MV EF RP+VRLGGESL
Sbjct: 1   MECSRQNGNGHAPKVESLCVKDLLNWGAAAEALKGSHLDEVKRMVGEFRRPVVRLGGESL 60

Query: 61  TIAQVAAIAAR-ASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRT 120
           TIAQVAA+AAR A+ V VELSE AR GV+ASS WV++SM  GTDSYGVTTGFG+TSHRRT
Sbjct: 61  TIAQVAAVAAREAAGVAVELSEAARGGVKASSDWVMESMNRGTDSYGVTTGFGATSHRRT 120

Query: 121 DQGEALQKELIRWI 134
            QG ALQKELIR++
Sbjct: 121 KQGAALQKELIRFL 134

[Close]

BLAST of HG10004196 vs. NCBI nr
Match: QUP61928.1 (phenylalanine ammonia lyase [Rhododendron fortunei])

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-36
Identity = 90/134 (67.16%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 1   MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESL 60
           ME   +NGN   PK  SLC      W  AAE L+ SHL+E K MV EF RP+VRLGGESL
Sbjct: 1   MECSRQNGNGHAPKVESLCVKDPLNWGAAAEALKGSHLDEVKRMVGEFRRPVVRLGGESL 60

Query: 61  TIAQVAAIAAR-ASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRT 120
           TIAQVAA+AAR A+ V VELSE AR GV+ASS WV+ SM  GTDSYGVTTGFG+TSHRRT
Sbjct: 61  TIAQVAAVAAREAAGVAVELSEAARGGVKASSDWVMDSMNRGTDSYGVTTGFGATSHRRT 120

Query: 121 DQGEALQKELIRWI 134
            QG ALQKELIR++
Sbjct: 121 KQGAALQKELIRFL 134

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BLAST of HG10004196 vs. ExPASy Swiss-Prot
Match: P45726 (Phenylalanine ammonia-lyase OS=Camellia sinensis OX=4442 GN=PAL PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 9.8e-36
Identity = 78/118 (66.10%), Postives = 92/118 (77.97%), Query Frame = 0


Query: 16  PSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDV 75
           P  C      W  AAE ++ SHLEE K MV EF +P+VRLGGE+LTI+QVAAIA R S+V
Sbjct: 17  PGFCLKDPLNWGVAAEAMKGSHLEEVKGMVEEFRKPVVRLGGETLTISQVAAIAVRGSEV 76

Query: 76  VVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI 134
            VELSE AR GV+ASS WV++SM  GTDSYGVTTGFG+TSHRRT +G ALQKELIR++
Sbjct: 77  AVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFL 134

[Close]

BLAST of HG10004196 vs. ExPASy Swiss-Prot
Match: P27991 (Phenylalanine ammonia-lyase 1 OS=Glycine max OX=3847 GN=PAL1 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.9e-35
Identity = 75/108 (69.44%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 26  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARP 85
           W  AAE ++ SHL+E K MVAE+ +P+VRLGGE+LTIAQVAA+A     V VELSE AR 
Sbjct: 26  WGAAAEAMKGSHLDEVKRMVAEYRKPVVRLGGETLTIAQVAAVAGHDHGVAVELSESARE 85

Query: 86  GVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI 134
           GV+ASS WV+ SM NGTDSYGVTTGFG+TSHRRT QG ALQKELIR++
Sbjct: 86  GVKASSEWVMNSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFL 133

[Close]

BLAST of HG10004196 vs. ExPASy Swiss-Prot
Match: P14166 (Phenylalanine ammonia-lyase OS=Ipomoea batatas OX=4120 GN=PAL PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.4e-34
Identity = 76/108 (70.37%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 26  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARP 85
           W  AAE L  SHL+E K MVAEF +P V+LGGE+LT+AQVA IA+R + V VELSEEAR 
Sbjct: 19  WEMAAESLRGSHLDEVKRMVAEFRKPAVKLGGETLTVAQVARIASRDNAVAVELSEEARA 78

Query: 86  GVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI 134
           GV+ASS WV+ SM  GTDSYGVTTGFG+TSHRRT QG ALQKELIR++
Sbjct: 79  GVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFL 126

[Close]

BLAST of HG10004196 vs. ExPASy Swiss-Prot
Match: O64963 (Phenylalanine ammonia-lyase 1 OS=Prunus avium OX=42229 GN=PAL1 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.2e-34
Identity = 76/108 (70.37%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 26  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARP 85
           W  AAE L+ SHL+E K MVAE+ +P+V+LGGESLTI+QVAAIA   S V VELSE AR 
Sbjct: 30  WGVAAETLKGSHLDEVKRMVAEYRKPVVKLGGESLTISQVAAIATHDSGVKVELSESARA 89

Query: 86  GVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI 134
           GV+ASS WV+ SM+ GTDSYGVTTGFG+TSHRRT QG ALQKELIR++
Sbjct: 90  GVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFL 137

[Close]

BLAST of HG10004196 vs. ExPASy Swiss-Prot
Match: O49835 (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon OX=34254 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.1e-34
Identity = 80/133 (60.15%), Postives = 96/133 (72.18%), Query Frame = 0


Query: 1   MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESL 60
           ME   ENGN    K    C      W  A+E ++ SHL+E K+MVAEF +P+V+L G++L
Sbjct: 1   METIVENGN---GKTMEFCMKDPLNWEMASESMKGSHLDEVKNMVAEFRKPVVQLAGKTL 60

Query: 61  TIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTD 120
           TI QVAAIAAR   V VEL+E AR GV+ASS WV+ SM  GTDSYGVTTGFG+TSHRRT 
Sbjct: 61  TIGQVAAIAARDDGVTVELAEAAREGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTK 120

Query: 121 QGEALQKELIRWI 134
           QG ALQKELIR++
Sbjct: 121 QGGALQKELIRFL 130

[Close]

BLAST of HG10004196 vs. ExPASy TrEMBL
Match: A0A5D3BPF6 (Phenylalanine ammonia-lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00540 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.5e-58
Identity = 119/134 (88.81%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 1   MEFHPENGNHGWPK-EPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGES 60
           ME  PENGNHGWPK EPSLCGGVAAYWSGAA+GLE SHLEEFK MV EF RPIVRLGGES
Sbjct: 1   MEPRPENGNHGWPKAEPSLCGGVAAYWSGAAKGLEGSHLEEFKRMVMEFRRPIVRLGGES 60

Query: 61  LTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRT 120
           LTIAQVAAIAAR+SDVVVELSEE+R  VEASSRWVV+SMTNGTDSYGVTTGFGSTSHRRT
Sbjct: 61  LTIAQVAAIAARSSDVVVELSEESRSAVEASSRWVVESMTNGTDSYGVTTGFGSTSHRRT 120

Query: 121 DQGEALQKELIRWI 134
           DQGEALQKELIR++
Sbjct: 121 DQGEALQKELIRFL 134

[Close]

BLAST of HG10004196 vs. ExPASy TrEMBL
Match: A0A1S3C3H3 (Phenylalanine ammonia-lyase OS=Cucumis melo OX=3656 GN=LOC103496433 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.5e-58
Identity = 119/134 (88.81%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 1   MEFHPENGNHGWPK-EPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGES 60
           ME  PENGNHGWPK EPSLCGGVAAYWSGAA+GLE SHLEEFK MV EF RPIVRLGGES
Sbjct: 1   MEPRPENGNHGWPKAEPSLCGGVAAYWSGAAKGLEGSHLEEFKRMVMEFRRPIVRLGGES 60

Query: 61  LTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRT 120
           LTIAQVAAIAAR+SDVVVELSEE+R  VEASSRWVV+SMTNGTDSYGVTTGFGSTSHRRT
Sbjct: 61  LTIAQVAAIAARSSDVVVELSEESRSAVEASSRWVVESMTNGTDSYGVTTGFGSTSHRRT 120

Query: 121 DQGEALQKELIRWI 134
           DQGEALQKELIR++
Sbjct: 121 DQGEALQKELIRFL 134

[Close]

BLAST of HG10004196 vs. ExPASy TrEMBL
Match: A0A0A0KG52 (Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_6G405960 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.0e-56
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESL 60
           ME  PENG+HGW KEPSLC GVAAYWSGAA+GLE SHLEEFK MV EF R +VRLGGESL
Sbjct: 1   MEPRPENGHHGWEKEPSLCAGVAAYWSGAAKGLEGSHLEEFKRMVMEFRRSVVRLGGESL 60

Query: 61  TIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTD 120
           TIAQVAAIAAR+SDVVVELSEEAR  VEASSRWVV+SMTNGTDSYGVTTGFGSTSHRRTD
Sbjct: 61  TIAQVAAIAARSSDVVVELSEEARSAVEASSRWVVESMTNGTDSYGVTTGFGSTSHRRTD 120

Query: 121 QGEALQKELIRWI 134
           QGEALQKELIR++
Sbjct: 121 QGEALQKELIRFL 133

[Close]

BLAST of HG10004196 vs. ExPASy TrEMBL
Match: A0A6A4LKH3 (Phenylalanine ammonia-lyase (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_06849 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 7.1e-37
Identity = 90/134 (67.16%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 1   MEFHPENGNHGWPKEPSLCGGVAAYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESL 60
           ME   +NGN   PK  SLC      W  AAE L+ SHL+E K MV EF RP+VRLGGESL
Sbjct: 1   MECSRQNGNGHAPKVDSLCVKDPLNWGAAAEALKGSHLDEVKRMVGEFRRPVVRLGGESL 60

Query: 61  TIAQVAAIAAR-ASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRT 120
           TIAQVAA+AAR A+ V VELSE AR GV+ASS WV+ SM  GTDSYGVTTGFG+TSHRRT
Sbjct: 61  TIAQVAAVAAREAAGVAVELSEAARGGVKASSDWVMDSMNRGTDSYGVTTGFGATSHRRT 120

Query: 121 DQGEALQKELIRWI 134
            QG ALQKELIR++
Sbjct: 121 KQGAALQKELIRFL 134

[Close]

BLAST of HG10004196 vs. ExPASy TrEMBL
Match: A5BPT8 (Phenylalanine ammonia-lyase OS=Vitis vinifera OX=29760 GN=VIT_06s0004g02620 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35
Identity = 89/137 (64.96%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 1   MEFHPENGN-HGWPKEPSLCGGVA--AYWSGAAEGLERSHLEEFKHMVAEFCRPIVRLGG 60
           MEF   NGN +G       C   A   YW+ AAE L+ SHLEE K MVA+F +P+VRLGG
Sbjct: 1   MEFSHHNGNGNGKVDANGFCMKAADPLYWAAAAETLKGSHLEEVKRMVADFRKPVVRLGG 60

Query: 61  ESLTIAQVAAIAARASD-VVVELSEEARPGVEASSRWVVKSMTNGTDSYGVTTGFGSTSH 120
           ESL IAQVAA+AA  SD V VELSE AR GV+ASS WV++SM  GTDSYGVTTGFG+TSH
Sbjct: 61  ESLNIAQVAAVAATGSDGVTVELSESARAGVQASSNWVMESMNQGTDSYGVTTGFGATSH 120

Query: 121 RRTDQGEALQKELIRWI 134
           RRT QG ALQKELIR++
Sbjct: 121 RRTKQGNALQKELIRFL 137

[Close]

BLAST of HG10004196 vs. TAIR 10
Match: AT2G37040.1 (PHE ammonia lyase 1 )

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-34
Identity = 79/145 (54.48%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 1   MEFHPENGNHGWPKEPSLCGG------------VAAYWSGAAEGLERSHLEEFKHMVAEF 60
           ME +  + ++G   +  LCGG                W  AAE ++ SHL+E K MVAEF
Sbjct: 1   MEINGAHKSNGGGVDAMLCGGDIKTKNMVINAEDPLNWGAAAEQMKGSHLDEVKRMVAEF 60

Query: 61  CRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARPGVEASSRWVVKSMTNGTDSYGVT 120
            +P+V LGGE+LTI QVAAI+   + V VELSE AR GV ASS WV++SM  GTDSYGVT
Sbjct: 61  RKPVVNLGGETLTIGQVAAISTIGNSVKVELSETARAGVNASSDWVMESMNKGTDSYGVT 120

Query: 121 TGFGSTSHRRTDQGEALQKELIRWI 134
           TGFG+TSHRRT  G ALQKELIR++
Sbjct: 121 TGFGATSHRRTKNGVALQKELIRFL 145

[Close]

BLAST of HG10004196 vs. TAIR 10
Match: AT3G10340.1 (phenylalanine ammonia-lyase 4 )

HSP 1 Score: 134.4 bits (337), Expect = 6.8e-32
Identity = 68/108 (62.96%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 26  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARP 85
           W+  AE L+ SHL+E K MV E+ +  V+LGGE+LTI QVAA+A       VEL+EEAR 
Sbjct: 20  WNATAEALKGSHLDEVKRMVKEYRKEAVKLGGETLTIGQVAAVARGGGGSTVELAEEARA 79

Query: 86  GVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI 134
           GV+ASS WV++SM  GTDSYGVTTGFG+TSHRRT QG ALQ ELIR++
Sbjct: 80  GVKASSEWVMESMNRGTDSYGVTTGFGATSHRRTKQGGALQNELIRFL 127

[Close]

BLAST of HG10004196 vs. TAIR 10
Match: AT3G53260.1 (phenylalanine ammonia-lyase 2 )

HSP 1 Score: 131.0 bits (328), Expect = 7.5e-31
Identity = 67/108 (62.04%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 26  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARP 85
           W  AA+ ++ SHL+E K MV E+ RP+V LGGE+LTI QVAAI+     V VEL+E +R 
Sbjct: 30  WGLAADQMKGSHLDEVKKMVEEYRRPVVNLGGETLTIGQVAAISTVGGSVKVELAETSRA 89

Query: 86  GVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI 134
           GV+ASS WV++SM  GTDSYGVTTGFG+TSHRRT  G ALQ ELIR++
Sbjct: 90  GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGTALQTELIRFL 137

[Close]

BLAST of HG10004196 vs. TAIR 10
Match: AT5G04230.1 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 128.3 bits (321), Expect = 4.8e-30
Identity = 68/108 (62.96%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 26  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARP 85
           W+ AAE L+ SHLEE K MV ++ +  V+LGGE+LTI QVAA+A  +    VELSEEAR 
Sbjct: 17  WNVAAEALKGSHLEEVKKMVKDYRKGTVQLGGETLTIGQVAAVA--SGGPTVELSEEARG 76

Query: 86  GVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI 134
           GV+ASS WV++SM   TD+YG+TTGFGS+S RRTDQG ALQKELIR++
Sbjct: 77  GVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYL 122

[Close]

BLAST of HG10004196 vs. TAIR 10
Match: AT5G04230.2 (phenyl alanine ammonia-lyase 3 )

HSP 1 Score: 128.3 bits (321), Expect = 4.8e-30
Identity = 68/108 (62.96%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 26  WSGAAEGLERSHLEEFKHMVAEFCRPIVRLGGESLTIAQVAAIAARASDVVVELSEEARP 85
           W+ AAE L+ SHLEE K MV ++ +  V+LGGE+LTI QVAA+A  +    VELSEEAR 
Sbjct: 17  WNVAAEALKGSHLEEVKKMVKDYRKGTVQLGGETLTIGQVAAVA--SGGPTVELSEEARG 76

Query: 86  GVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRWI 134
           GV+ASS WV++SM   TD+YG+TTGFGS+S RRTDQG ALQKELIR++
Sbjct: 77  GVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYL 122

The following BLAST results are available for this feature:

BLAST of HG10004196 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456500.1	2.0e-57	88.81	PREDICTED: phenylalanine ammonia-lyase G4 [Cucumis melo] >KAA0036480.1 phenylala...	[more]
XP_004149916.1	6.3e-56	86.47	phenylalanine ammonia-lyase G4 [Cucumis sativus] >KGN47834.1 hypothetical protei...	[more]
XP_038883983.1	9.4e-52	84.38	phenylalanine ammonia-lyase G4-like [Benincasa hispida]	[more]
KAG5515527.1	8.5e-37	67.16	hypothetical protein RHGRI_036534 [Rhododendron griersonianum]	[more]
QUP61928.1	1.5e-36	67.16	phenylalanine ammonia lyase [Rhododendron fortunei]	[more]

BLAST of HG10004196 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45726	9.8e-36	66.10	Phenylalanine ammonia-lyase OS=Camellia sinensis OX=4442 GN=PAL PE=2 SV=1	[more]
P27991	2.9e-35	69.44	Phenylalanine ammonia-lyase 1 OS=Glycine max OX=3847 GN=PAL1 PE=3 SV=1	[more]
P14166	2.4e-34	70.37	Phenylalanine ammonia-lyase OS=Ipomoea batatas OX=4120 GN=PAL PE=2 SV=1	[more]
O64963	3.2e-34	70.37	Phenylalanine ammonia-lyase 1 OS=Prunus avium OX=42229 GN=PAL1 PE=2 SV=1	[more]
O49835	4.1e-34	60.15	Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon OX=34254 PE=2 SV=1	[more]

BLAST of HG10004196 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPF6	9.5e-58	88.81	Phenylalanine ammonia-lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3C3H3	9.5e-58	88.81	Phenylalanine ammonia-lyase OS=Cucumis melo OX=3656 GN=LOC103496433 PE=3 SV=1	[more]
A0A0A0KG52	3.0e-56	86.47	Phenylalanine ammonia-lyase OS=Cucumis sativus OX=3659 GN=Csa_6G405960 PE=3 SV=1	[more]
A0A6A4LKH3	7.1e-37	67.16	Phenylalanine ammonia-lyase (Fragment) OS=Rhododendron williamsianum OX=262921 G...	[more]
A5BPT8	1.3e-35	64.96	Phenylalanine ammonia-lyase OS=Vitis vinifera OX=29760 GN=VIT_06s0004g02620 PE=3...	[more]

BLAST of HG10004196 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37040.1	2.5e-34	54.48	PHE ammonia lyase 1	[more]
AT3G10340.1	6.8e-32	62.96	phenylalanine ammonia-lyase 4	[more]
AT3G53260.1	7.5e-31	62.04	phenylalanine ammonia-lyase 2	[more]
AT5G04230.1	4.8e-30	62.96	phenyl alanine ammonia-lyase 3	[more]
AT5G04230.2	4.8e-30	62.96	phenyl alanine ammonia-lyase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024083	Fumarase/histidase, N-terminal	GENE3D	1.10.275.10		coord: 20..134 e-value: 2.3E-31 score: 111.1
IPR001106	Aromatic amino acid lyase	PFAM	PF00221	Lyase_aromatic	coord: 60..131 e-value: 6.6E-14 score: 51.4
IPR001106	Aromatic amino acid lyase	PANTHER	PTHR10362	HISTIDINE AMMONIA-LYASE	coord: 10..133
None	No IPR available	PANTHER	PTHR10362:SF55	AMMONIA-LYASE, PUTATIVE-RELATED	coord: 10..133
IPR008948	L-Aspartase-like	SUPERFAMILY	48557	L-aspartase-like	coord: 25..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004196.1	HG10004196.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009800	cinnamic acid biosynthetic process
biological_process	GO:0006559	L-phenylalanine catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0045548	phenylalanine ammonia-lyase activity
molecular_function	GO:0003824	catalytic activity