HG10003947 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCCAGAATCTCGCCGGTAGATAATCGTGTTCCTCTGCTTCTTAAACCCCAACCAATCCCCGACAAAATTCCCCCAATTCTGATTCCGACCGCTGTGGACGTGCCGGAGGTGGGCCGTAAGAAGTTCCCGGTGAACTTATTGGCTGGATCAGAACTGGGTGTGAAGGTGAGACCCAAAGGAGAGTCGATGGATATGGTGGTGGTGGAGCCGGCGGTGGCGAAAGCGTCCAACCGGGCGGTTCAAATGGCGATGGGGTTCAAAGCCGGTGGTGGAAAAATGGGATCTGTGATTCCGAAGAAGAGGAAGTTAGTGAAGACAATGATGTATCACTCCATAAAGGATTTTGTTATATCACTGTTTCGTACGCCGCCGTCCGCCGGCGCCAGCGCCGGAGCTCCGCCGTAA ATGGGATCCAGAATCTCGCCGGTAGATAATCGTGTTCCTCTGCTTCTTAAACCCCAACCAATCCCCGACAAAATTCCCCCAATTCTGATTCCGACCGCTGTGGACGTGCCGGAGGTGGGCCGTAAGAAGTTCCCGGTGAACTTATTGGCTGGATCAGAACTGGGTGTGAAGGTGAGACCCAAAGGAGAGTCGATGGATATGGTGGTGGTGGAGCCGGCGGTGGCGAAAGCGTCCAACCGGGCGGTTCAAATGGCGATGGGGTTCAAAGCCGGTGGTGGAAAAATGGGATCTGTGATTCCGAAGAAGAGGAAGTTAGTGAAGACAATGATGTATCACTCCATAAAGGATTTTGTTATATCACTGTTTCGTACGCCGCCGTCCGCCGGCGCCAGCGCCGGAGCTCCGCCGTAA ATGGGATCCAGAATCTCGCCGGTAGATAATCGTGTTCCTCTGCTTCTTAAACCCCAACCAATCCCCGACAAAATTCCCCCAATTCTGATTCCGACCGCTGTGGACGTGCCGGAGGTGGGCCGTAAGAAGTTCCCGGTGAACTTATTGGCTGGATCAGAACTGGGTGTGAAGGTGAGACCCAAAGGAGAGTCGATGGATATGGTGGTGGTGGAGCCGGCGGTGGCGAAAGCGTCCAACCGGGCGGTTCAAATGGCGATGGGGTTCAAAGCCGGTGGTGGAAAAATGGGATCTGTGATTCCGAAGAAGAGGAAGTTAGTGAAGACAATGATGTATCACTCCATAAAGGATTTTGTTATATCACTGTTTCGTACGCCGCCGTCCGCCGGCGCCAGCGCCGGAGCTCCGCCGTAA MGSRISPVDNRVPLLLKPQPIPDKIPPILIPTAVDVPEVGRKKFPVNLLAGSELGVKVRPKGESMDMVVVEPAVAKASNRAVQMAMGFKAGGGKMGSVIPKKRKLVKTMMYHSIKDFVISLFRTPPSAGASAGAPP Homology
BLAST of HG10003947 vs. NCBI nr
Match: KGN47677.1 (hypothetical protein Csa_018325 [Cucumis sativus]) HSP 1 Score: 118.2 bits (295), Expect = 5.4e-23 Identity = 66/102 (64.71%), Postives = 79/102 (77.45%), Query Frame = 0
BLAST of HG10003947 vs. NCBI nr
Match: KAG6578935.1 (hypothetical protein SDJN03_23383, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 90.1 bits (222), Expect = 1.6e-14 Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of HG10003947 vs. NCBI nr
Match: KAG6578934.1 (hypothetical protein SDJN03_23382, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 84.3 bits (207), Expect = 8.6e-13 Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = 0
BLAST of HG10003947 vs. NCBI nr
Match: KAE8647204.1 (hypothetical protein Csa_019006, partial [Cucumis sativus]) HSP 1 Score: 82.4 bits (202), Expect = 3.3e-12 Identity = 45/68 (66.18%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of HG10003947 vs. NCBI nr
Match: KAG6602134.1 (hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 68.2 bits (165), Expect = 6.4e-08 Identity = 48/131 (36.64%), Postives = 66/131 (50.38%), Query Frame = 0
BLAST of HG10003947 vs. ExPASy TrEMBL
Match: A0A0A0KH01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374700 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.6e-23 Identity = 66/102 (64.71%), Postives = 79/102 (77.45%), Query Frame = 0
BLAST of HG10003947 vs. ExPASy TrEMBL
Match: A0A6J1CJW3 (uncharacterized protein LOC111011963 OS=Momordica charantia OX=3673 GN=LOC111011963 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 6.4e-06 Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0
BLAST of HG10003947 vs. ExPASy TrEMBL
Match: A0A0A0KDQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374710 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 9.3e-05 Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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