HG10003945 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTTCAGAGTGTTGTCGGACGTCAATCCGGTCTCCGATCTTCCTCCAAACAAGCCGGTGCTGGTGCCGGCGGCGGCGGCGGCGGCGTTGAACAGGCCGGCGATTGGGTACAGAGTGGGCGGTGGAAAAATGAAATCTGTGATTCCGAAGAAGAGGAAGCTAGTGAAGACGATGATTTACCACTGTATTAAGGACTTCCTTATATCGCTCTTTCGTCCGTCGCCGGAGATCGAACGACCGCCGCCAACCCATTTCTGA ATGCATTTCAGAGTGTTGTCGGACGTCAATCCGGTCTCCGATCTTCCTCCAAACAAGCCGGTGCTGGTGCCGGCGGCGGCGGCGGCGGCGTTGAACAGGCCGGCGATTGGGTACAGAGTGGGCGGTGGAAAAATGAAATCTGTGATTCCGAAGAAGAGGAAGCTAGTGAAGACGATGATTTACCACTGTATTAAGGACTTCCTTATATCGCTCTTTCGTCCGTCGCCGGAGATCGAACGACCGCCGCCAACCCATTTCTGA ATGCATTTCAGAGTGTTGTCGGACGTCAATCCGGTCTCCGATCTTCCTCCAAACAAGCCGGTGCTGGTGCCGGCGGCGGCGGCGGCGGCGTTGAACAGGCCGGCGATTGGGTACAGAGTGGGCGGTGGAAAAATGAAATCTGTGATTCCGAAGAAGAGGAAGCTAGTGAAGACGATGATTTACCACTGTATTAAGGACTTCCTTATATCGCTCTTTCGTCCGTCGCCGGAGATCGAACGACCGCCGCCAACCCATTTCTGA MHFRVLSDVNPVSDLPPNKPVLVPAAAAAALNRPAIGYRVGGGKMKSVIPKKRKLVKTMIYHCIKDFLISLFRPSPEIERPPPTHF Homology
BLAST of HG10003945 vs. NCBI nr
Match: KAE8647260.1 (hypothetical protein Csa_018328, partial [Cucumis sativus]) HSP 1 Score: 93.2 bits (230), Expect = 1.2e-15 Identity = 53/84 (63.10%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of HG10003945 vs. NCBI nr
Match: XP_022141661.1 (uncharacterized protein LOC111011963 [Momordica charantia]) HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10 Identity = 47/84 (55.95%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of HG10003945 vs. NCBI nr
Match: KAG6602134.1 (hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.1 bits (183), Expect = 3.3e-10 Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 0
BLAST of HG10003945 vs. NCBI nr
Match: TYK18680.1 (hypothetical protein E5676_scaffold481G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09 Identity = 45/78 (57.69%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of HG10003945 vs. NCBI nr
Match: KAG6602131.1 (hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 72.4 bits (176), Expect = 2.1e-09 Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of HG10003945 vs. ExPASy TrEMBL
Match: A0A0A0KDQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374710 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.7e-16 Identity = 53/84 (63.10%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of HG10003945 vs. ExPASy TrEMBL
Match: A0A6J1CJW3 (uncharacterized protein LOC111011963 OS=Momordica charantia OX=3673 GN=LOC111011963 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.5e-11 Identity = 47/84 (55.95%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of HG10003945 vs. ExPASy TrEMBL
Match: A0A5D3D590 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00190 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 6.1e-10 Identity = 45/78 (57.69%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of HG10003945 vs. ExPASy TrEMBL
Match: A0A0A0KH01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374700 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-04 Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of HG10003945 vs. ExPASy TrEMBL
Match: A0A0A0KFQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374720 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.9e-04 Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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