HG10003635 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGCAATAACAGGCAAAATAAAACTCACTCATCTTTTTCAATCTTCAGCATTTTCAAATCCAGAAGGAGTCGAAAAGGAGACCACTGCGACCATGATAGCTCTTGGCCAGACGAGATGCCGAGATTGAACAAGGTGTGGCCGAGTGATGAGGACAAACCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATTGACAGGATCTATCGAAACCGTGTTTTTGAATCCGAGCGCCAAACTGTCACTATAACTCCAAATGGAACAAAACTCAATGTGTAA ATGGGAGGCAATAACAGGCAAAATAAAACTCACTCATCTTTTTCAATCTTCAGCATTTTCAAATCCAGAAGGAGTCGAAAAGGAGACCACTGCGACCATGATAGCTCTTGGCCAGACGAGATGCCGAGATTGAACAAGGTGTGGCCGAGTGATGAGGACAAACCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATTGACAGGATCTATCGAAACCGTGTTTTTGAATCCGAGCGCCAAACTGTCACTATAACTCCAAATGGAACAAAACTCAATGTGTAA ATGGGAGGCAATAACAGGCAAAATAAAACTCACTCATCTTTTTCAATCTTCAGCATTTTCAAATCCAGAAGGAGTCGAAAAGGAGACCACTGCGACCATGATAGCTCTTGGCCAGACGAGATGCCGAGATTGAACAAGGTGTGGCCGAGTGATGAGGACAAACCTCATCATTGGGTTGCTGAACCTGGTATTGATAGAAAGGCCAAAGATTACATTGACAGGATCTATCGAAACCGTGTTTTTGAATCCGAGCGCCAAACTGTCACTATAACTCCAAATGGAACAAAACTCAATGTGTAA MGGNNRQNKTHSSFSIFSIFKSRRSRKGDHCDHDSSWPDEMPRLNKVWPSDEDKPHHWVAEPGIDRKAKDYIDRIYRNRVFESERQTVTITPNGTKLNV Homology
BLAST of HG10003635 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus]) HSP 1 Score: 177.9 bits (450), Expect = 4.2e-41 Identity = 82/97 (84.54%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of HG10003635 vs. NCBI nr
Match: KAA0035003.1 (hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343.1 hypothetical protein E5676_scaffold155G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 175.6 bits (444), Expect = 2.1e-40 Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 0
BLAST of HG10003635 vs. NCBI nr
Match: KGN45869.1 (hypothetical protein Csa_005516 [Cucumis sativus]) HSP 1 Score: 174.9 bits (442), Expect = 3.5e-40 Identity = 83/99 (83.84%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of HG10003635 vs. NCBI nr
Match: KAG6592306.1 (hypothetical protein SDJN03_14652, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37 Identity = 79/98 (80.61%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of HG10003635 vs. NCBI nr
Match: KAG6592308.1 (hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.9 bits (411), Expect = 1.4e-36 Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 0
BLAST of HG10003635 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.0e-41 Identity = 82/97 (84.54%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of HG10003635 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40 Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 0
BLAST of HG10003635 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40 Identity = 83/97 (85.57%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of HG10003635 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.7e-40 Identity = 83/99 (83.84%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of HG10003635 vs. ExPASy TrEMBL
Match: A0A0A0K8W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32 Identity = 72/99 (72.73%), Postives = 83/99 (83.84%), Query Frame = 0
BLAST of HG10003635 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 74.7 bits (182), Expect = 4.6e-14 Identity = 47/91 (51.65%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of HG10003635 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 5.3e-10 Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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