Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGAAGAAAATGAGAGAAAAAGGAGTTCATTGGGACAAGAAAAGAAGAAAAGGAGGAAGAGTTCGTTTGAATGGAGTAAAGGGGAAGAGGTAAATCTATTGAAGAAGCTGGTTGAGTTCCGTACAAAGAAGATGGCTGACGAAGAATTTTATCCGTTTTTGAGAGATGGGTCATTGGCTGAGGTGTCCAAGATTCAAATATTCAACAAGATTCAACAACTCAAAAGGGAATATTTGGAGAAGAAATTAGAGTTGAGAAAAATGAGAATGCAATATTTGAAATACGACGACGACGACGAGGGTTTTGAGTTATCAAATCGACTTTGGGGTGAAGTTGAAACCGGAAGTGCTTCTACCTCTAAAGCATTGGATGTGTGTAGTAGGAGTTATTTTGAAGGCTTTTTTGATGGTCATGGGCTTCATATACAACTATTTACGCCATCTTTTCTCGATGCAACCAACAAGGACATCCACCATTTGTTTTCTCTTCAAAATCATCATTTCTTAATCAAAGCTAACTTGAAGGCTCAACTTGCTCAACTAAAGTACGACATCATTCAAGCTCGTGATTTCAACAATCCTACCAATGATCAATAA
mRNA sequence
ATGGGGGAAGAAAATGAGAGAAAAAGGAGTTCATTGGGACAAGAAAAGAAGAAAAGGAGGAAGAGTTCGTTTGAATGGAGTAAAGGGGAAGAGGTAAATCTATTGAAGAAGCTGGTTGAGTTCCGTACAAAGAAGATGGCTGACGAAGAATTTTATCCGTTTTTGAGAGATGGGTCATTGGCTGAGGTGTCCAAGATTCAAATATTCAACAAGATTCAACAACTCAAAAGGGAATATTTGGAGAAGAAATTAGAGTTGAGAAAAATGAGAATGCAATATTTGAAATACGACGACGACGACGAGGGTTTTGAGTTATCAAATCGACTTTGGGGTGAAGTTGAAACCGGAAGTGCTTCTACCTCTAAAGCATTGGATGTGTGTAGTAGGAGTTATTTTGAAGGCTTTTTTGATGGTCATGGGCTTCATATACAACTATTTACGCCATCTTTTCTCGATGCAACCAACAAGGACATCCACCATTTGTTTTCTCTTCAAAATCATCATTTCTTAATCAAAGCTAACTTGAAGGCTCAACTTGCTCAACTAAAGTACGACATCATTCAAGCTCGTGATTTCAACAATCCTACCAATGATCAATAA
Coding sequence (CDS)
ATGGGGGAAGAAAATGAGAGAAAAAGGAGTTCATTGGGACAAGAAAAGAAGAAAAGGAGGAAGAGTTCGTTTGAATGGAGTAAAGGGGAAGAGGTAAATCTATTGAAGAAGCTGGTTGAGTTCCGTACAAAGAAGATGGCTGACGAAGAATTTTATCCGTTTTTGAGAGATGGGTCATTGGCTGAGGTGTCCAAGATTCAAATATTCAACAAGATTCAACAACTCAAAAGGGAATATTTGGAGAAGAAATTAGAGTTGAGAAAAATGAGAATGCAATATTTGAAATACGACGACGACGACGAGGGTTTTGAGTTATCAAATCGACTTTGGGGTGAAGTTGAAACCGGAAGTGCTTCTACCTCTAAAGCATTGGATGTGTGTAGTAGGAGTTATTTTGAAGGCTTTTTTGATGGTCATGGGCTTCATATACAACTATTTACGCCATCTTTTCTCGATGCAACCAACAAGGACATCCACCATTTGTTTTCTCTTCAAAATCATCATTTCTTAATCAAAGCTAACTTGAAGGCTCAACTTGCTCAACTAAAGTACGACATCATTCAAGCTCGTGATTTCAACAATCCTACCAATGATCAATAA
Protein sequence
MGEENERKRSSLGQEKKKRRKSSFEWSKGEEVNLLKKLVEFRTKKMADEEFYPFLRDGSLAEVSKIQIFNKIQQLKREYLEKKLELRKMRMQYLKYDDDDEGFELSNRLWGEVETGSASTSKALDVCSRSYFEGFFDGHGLHIQLFTPSFLDATNKDIHHLFSLQNHHFLIKANLKAQLAQLKYDIIQARDFNNPTNDQ
Homology
BLAST of HG10003372 vs. NCBI nr
Match:
KAA0054121.1 (hypothetical protein E6C27_scaffold131G00330 [Cucumis melo var. makuwa])
HSP 1 Score: 263.1 bits (671), Expect = 2.0e-66
Identity = 145/205 (70.73%), Postives = 167/205 (81.46%), Query Frame = 0
Query: 1 MGEENERKRSSLGQEKKKRRKSSFEWSKGEEVNLLKKLVEFRTKKMADEEFYPFLRDGSL 60
M EE ER++SSLG EKKKRRKS FEWSKGEE+NLLKKLVEF +K ++ EEFYPFLR+GSL
Sbjct: 53 MEEEKERRKSSLGSEKKKRRKSLFEWSKGEELNLLKKLVEFNSKNISREEFYPFLRNGSL 112
Query: 61 AEVSKIQIFNKIQQLKREYLEKKLELRKMRMQYLKYDDD-------DEGFELSNRLWGEV 120
AEVSKIQIF+KIQQLK EYLE KLELRKMR + +K +DD DEGFELSN+LWGEV
Sbjct: 113 AEVSKIQIFDKIQQLKSEYLENKLELRKMRKRNVKLEDDDDYNDKRDEGFELSNQLWGEV 172
Query: 121 -ETGSASTSKALDVCSRSYFEGFFDGHGLHIQLFTPSFLDATNKDIHHLFSLQNHHFLIK 180
ET AS SKAL+VCSR+Y+EGFF+ GL +QLF PSF DAT KDI HLF+L++H L K
Sbjct: 173 DETERASNSKALEVCSRNYYEGFFESCGLDVQLFDPSFHDATKKDIDHLFNLEHHVILSK 232
Query: 181 ANLKAQLAQLKYDIIQARDFNNPTN 198
A L AQ+ QLKYD+IQAR NNPTN
Sbjct: 233 AKLTAQILQLKYDLIQAR-VNNPTN 256
BLAST of HG10003372 vs. NCBI nr
Match:
KAG6585881.1 (hypothetical protein SDJN03_18614, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 193.7 bits (491), Expect = 1.5e-45
Identity = 113/202 (55.94%), Postives = 140/202 (69.31%), Query Frame = 0
Query: 7 RKRSSLGQE---KKKRRKSSFEWSKGEEVNLLKKLVEFRTKKMADEEFYPFLRDGSLAEV 66
RKR + ++ ++K+ K+ F+WS+GEE+NLL KLVEF + E+FYPFLR GSLA+V
Sbjct: 2 RKRKDIIKDTSTRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRSGSLADV 61
Query: 67 SKIQIFNKIQQLKREYLEKKLELRKMRMQYLKYDDD-----DEGFELSNRLWG----EVE 126
KIQIF+KIQQLKR++LEK + R+Q + + DD DE FELSNRLWG E E
Sbjct: 62 PKIQIFDKIQQLKRKHLEK----LESRVQMVSHADDERNERDESFELSNRLWGENEIETE 121
Query: 127 TGSASTSKALDVCSRSYFEGFFDGHGLHIQLFTPSFLDATNKDIHHLFSLQNHHFLIKAN 186
T + STSKA D S S FE F+GH LH+ FTPSFL AT K++ L LQNHH LIKAN
Sbjct: 122 TQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLKATKKEMDELLDLQNHHSLIKAN 181
Query: 187 LKAQLAQLKYDIIQARDFNNPT 197
LKAQLAQLK+ + Q R F N T
Sbjct: 182 LKAQLAQLKHHLTQTR-FENST 198
BLAST of HG10003372 vs. NCBI nr
Match:
KGN49711.1 (hypothetical protein Csa_018385 [Cucumis sativus])
HSP 1 Score: 173.3 bits (438), Expect = 2.1e-39
Identity = 109/205 (53.17%), Postives = 134/205 (65.37%), Query Frame = 0
Query: 1 MGEENERKRSSLGQEKKKRRKSSFEWSKGEEVNLLKKLVEFRTKKMADEEFYPFLRDGSL 60
M E E ++ S G KKKRRKS FEWSKGEE+NLLKKLVEF TK ++ EEFYPFLR+GSL
Sbjct: 1 MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSL 60
Query: 61 AEVSKIQIFNKIQQLKREYLEKKLELRKMRMQYLKYDDD-------DEGFELSNRLWGEV 120
AEVS+ QIF KIQ+LKREYL++KLELRKMR + +K +DD DEGFELSN +WG+V
Sbjct: 61 AEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDDDFNNKRDEGFELSNEVWGKV 120
Query: 121 -ETGSASTSKALDVCSRSYFEGFFDGHGLHIQLFTPSFLDATNKDIHHLFSLQNHHFLIK 180
ET AS SK L+ DA KDI LF+L++ FL K
Sbjct: 121 DETERASISKVLE--------------------------DAAKKDIDRLFNLEHQAFLFK 178
Query: 181 ANLKAQLAQLKYDIIQARDFNNPTN 198
+ L ++L +LK DIIQA +PT+
Sbjct: 181 SKLVSKLVKLKNDIIQA-PITDPTH 178
BLAST of HG10003372 vs. NCBI nr
Match:
KAG6575378.1 (hypothetical protein SDJN03_26017, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 89.7 bits (221), Expect = 3.0e-14
Identity = 49/91 (53.85%), Postives = 61/91 (67.03%), Query Frame = 0
Query: 100 DEGFELSNRLWG--EVETGSASTSKALDVCSRSYFEGFFDGHGLHIQLFTPSFLDATNKD 159
DE FELS R G E+ET S S S L+V ++ FE + H L + LF PS LDA K+
Sbjct: 6 DEVFELSKRFSGENEIETQSGSASTILEVSNKRNFEALLERHRLRLDLFIPSDLDAIKKE 65
Query: 160 IHHLFSLQNHHFLIKANLKAQLAQLKYDIIQ 189
+ LF LQN + LIKANLKAQLAQLK+DI++
Sbjct: 66 VDELFYLQNQYSLIKANLKAQLAQLKHDIVR 96
BLAST of HG10003372 vs. NCBI nr
Match:
XP_022158998.1 (probable transcription factor At4g01260 [Momordica charantia])
HSP 1 Score: 63.2 bits (152), Expect = 3.0e-06
Identity = 51/191 (26.70%), Postives = 98/191 (51.31%), Query Frame = 0
Query: 3 EENERKRSSLG--QEKKKRRKSSFEWSKGEEVNLLKKLVEFRTKKMA-DEEFYPFLRDGS 62
E++E K SS +E KK +K F WS +E +LK EF K + ++FY F+++
Sbjct: 39 EKDEEKCSSPNSKEESKKSKKMGFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKL 98
Query: 63 LAEVSKIQIFNKIQQLKREYLEKKLELRKMRMQYLKYDDDDEGFELSNRLWGEVET---- 122
+VS Q+ +K+ +L++ +L+ + + K+RM++ K + ++ +E+SN +WG
Sbjct: 99 SVDVSNSQLSDKVYRLRKRFLKDECK-GKIRMKFSKGNQLEKLYEMSNNIWGSNSNTQNT 158
Query: 123 ---GSASTSKALDVCSRSYFEGFFDGHGLHIQLFTPSFLDATNKDIHHLFSLQNHHFLIK 182
G+ ++A++ FE + + I P+ L KD + Q+ + L
Sbjct: 159 QSGGNQWKAEAVNRLCEEMFERVIENVKVDISCIPPNVLXDIRKDWEQMKMAQDEYELKN 218
Query: 183 ANLKAQLAQLK 184
ANL Q++ ++
Sbjct: 219 ANLLLQISHIR 228
BLAST of HG10003372 vs. ExPASy TrEMBL
Match:
A0A5A7UKP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00330 PE=3 SV=1)
HSP 1 Score: 263.1 bits (671), Expect = 9.6e-67
Identity = 145/205 (70.73%), Postives = 167/205 (81.46%), Query Frame = 0
Query: 1 MGEENERKRSSLGQEKKKRRKSSFEWSKGEEVNLLKKLVEFRTKKMADEEFYPFLRDGSL 60
M EE ER++SSLG EKKKRRKS FEWSKGEE+NLLKKLVEF +K ++ EEFYPFLR+GSL
Sbjct: 53 MEEEKERRKSSLGSEKKKRRKSLFEWSKGEELNLLKKLVEFNSKNISREEFYPFLRNGSL 112
Query: 61 AEVSKIQIFNKIQQLKREYLEKKLELRKMRMQYLKYDDD-------DEGFELSNRLWGEV 120
AEVSKIQIF+KIQQLK EYLE KLELRKMR + +K +DD DEGFELSN+LWGEV
Sbjct: 113 AEVSKIQIFDKIQQLKSEYLENKLELRKMRKRNVKLEDDDDYNDKRDEGFELSNQLWGEV 172
Query: 121 -ETGSASTSKALDVCSRSYFEGFFDGHGLHIQLFTPSFLDATNKDIHHLFSLQNHHFLIK 180
ET AS SKAL+VCSR+Y+EGFF+ GL +QLF PSF DAT KDI HLF+L++H L K
Sbjct: 173 DETERASNSKALEVCSRNYYEGFFESCGLDVQLFDPSFHDATKKDIDHLFNLEHHVILSK 232
Query: 181 ANLKAQLAQLKYDIIQARDFNNPTN 198
A L AQ+ QLKYD+IQAR NNPTN
Sbjct: 233 AKLTAQILQLKYDLIQAR-VNNPTN 256
BLAST of HG10003372 vs. ExPASy TrEMBL
Match:
A0A0A0KPQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G078280 PE=3 SV=1)
HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 109/205 (53.17%), Postives = 134/205 (65.37%), Query Frame = 0
Query: 1 MGEENERKRSSLGQEKKKRRKSSFEWSKGEEVNLLKKLVEFRTKKMADEEFYPFLRDGSL 60
M E E ++ S G KKKRRKS FEWSKGEE+NLLKKLVEF TK ++ EEFYPFLR+GSL
Sbjct: 1 MEEGKEGRKRSTGSGKKKRRKSLFEWSKGEELNLLKKLVEFNTKNISREEFYPFLRNGSL 60
Query: 61 AEVSKIQIFNKIQQLKREYLEKKLELRKMRMQYLKYDDD-------DEGFELSNRLWGEV 120
AEVS+ QIF KIQ+LKREYL++KLELRKMR + +K +DD DEGFELSN +WG+V
Sbjct: 61 AEVSRTQIFEKIQELKREYLKQKLELRKMRKRNVKMEDDDDFNNKRDEGFELSNEVWGKV 120
Query: 121 -ETGSASTSKALDVCSRSYFEGFFDGHGLHIQLFTPSFLDATNKDIHHLFSLQNHHFLIK 180
ET AS SK L+ DA KDI LF+L++ FL K
Sbjct: 121 DETERASISKVLE--------------------------DAAKKDIDRLFNLEHQAFLFK 178
Query: 181 ANLKAQLAQLKYDIIQARDFNNPTN 198
+ L ++L +LK DIIQA +PT+
Sbjct: 181 SKLVSKLVKLKNDIIQA-PITDPTH 178
BLAST of HG10003372 vs. ExPASy TrEMBL
Match:
A0A6P5XDB4 (STOREKEEPER protein-like OS=Durio zibethinus OX=66656 GN=LOC111282147 PE=3 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 8.8e-04
Identity = 31/102 (30.39%), Postives = 56/102 (54.90%), Query Frame = 0
Query: 26 WSKGEEVNLLKKLVEFRTKKMAD-----EEFYPFLRDGSLAEVSKIQIFNKIQQLKREYL 85
WS+ +E+ +LK ++E+++KK +D F+ F++ A+VSK Q+ KI++LK++Y
Sbjct: 152 WSEADEIAILKGMIEYKSKKGSDPYADSSGFHDFIKQSIQADVSKYQLSEKIRRLKKKYK 211
Query: 86 EKKLELRKMRMQYLKYDDDDEGFELSNRLWGEVETGSASTSK 123
+ + D + FELS ++WG ET S +
Sbjct: 212 TNSEKCQNGNDPVFSKPHDHKSFELSKKIWGN-ETNEKSNKR 252
BLAST of HG10003372 vs. TAIR 10
Match:
AT2G36340.1 (DNA-binding storekeeper protein-related transcriptional regulator )
HSP 1 Score: 42.7 bits (99), Expect = 3.9e-04
Identity = 27/99 (27.27%), Postives = 50/99 (50.51%), Query Frame = 0
Query: 22 SSFEWSKGEEVNLLKKLVEFRTKKMAD-----EEFYPFLRDGSLAEVSKIQIFNKIQQLK 81
S WSK +E+ +L +V++ + + Y +++D A+ SKIQ+ NK++ +K
Sbjct: 59 SKMNWSKNDELVILGGIVDYENETKLSYRSDWDALYRYIKDCVEAKFSKIQLINKVKNMK 118
Query: 82 REYLEKKLELRKMRMQYLKYDDDDEGFELSNRLWGEVET 116
R++ + DDDE F+LS +W + E+
Sbjct: 119 RKFTYNQGRSNHGEQLSFTNTDDDEIFKLSLIIWDKNES 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0054121.1 | 2.0e-66 | 70.73 | hypothetical protein E6C27_scaffold131G00330 [Cucumis melo var. makuwa] | [more] |
KAG6585881.1 | 1.5e-45 | 55.94 | hypothetical protein SDJN03_18614, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KGN49711.1 | 2.1e-39 | 53.17 | hypothetical protein Csa_018385 [Cucumis sativus] | [more] |
KAG6575378.1 | 3.0e-14 | 53.85 | hypothetical protein SDJN03_26017, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022158998.1 | 3.0e-06 | 26.70 | probable transcription factor At4g01260 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UKP8 | 9.6e-67 | 70.73 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A0A0KPQ5 | 1.0e-39 | 53.17 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G078280 PE=3 SV=1 | [more] |
A0A6P5XDB4 | 8.8e-04 | 30.39 | STOREKEEPER protein-like OS=Durio zibethinus OX=66656 GN=LOC111282147 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G36340.1 | 3.9e-04 | 27.27 | DNA-binding storekeeper protein-related transcriptional regulator | [more] |