Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAATCGGAATCGGCAAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCTGGAATTTGCCCTTCCTGTCTTCGTGAAAAGCTTCAACAATTCCATCAATCTTCTATTCATTCCGATTCTCATTCAACTACCTTCTCTTCTTCTTCTTCTTCCGCTGATTTTTTCTTCCCCGCCGATTCCTCACGCCGCCGCCGCCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGCCTGCAGATTTTTTTGGGGACAACCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCCGATGCCGGCGCCGGCGCCAAAGGAGGACAAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTGGTCCGCCCGAAGGCTTTCTCTTTTCCTTGA
mRNA sequence
ATGGGGAAATCGGAATCGGCAAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCTGGAATTTGCCCTTCCTGTCTTCGTGAAAAGCTTCAACAATTCCATCAATCTTCTATTCATTCCGATTCTCATTCAACTACCTTCTCTTCTTCTTCTTCTTCCGCTGATTTTTTCTTCCCCGCCGATTCCTCACGCCGCCGCCGCCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGCCTGCAGATTTTTTTGGGGACAACCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCCGATGCCGGCGCCGGCGCCAAAGGAGGACAAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTGGTCCGCCCGAAGGCTTTCTCTTTTCCTTGA
Coding sequence (CDS)
ATGGGGAAATCGGAATCGGCAAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCTGGAATTTGCCCTTCCTGTCTTCGTGAAAAGCTTCAACAATTCCATCAATCTTCTATTCATTCCGATTCTCATTCAACTACCTTCTCTTCTTCTTCTTCTTCCGCTGATTTTTTCTTCCCCGCCGATTCCTCACGCCGCCGCCGCCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGCCTGCAGATTTTTTTGGGGACAACCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCCGATGCCGGCGCCGGCGCCAAAGGAGGACAAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTGGTCCGCCCGAAGGCTTTCTCTTTTCCTTGA
Protein sequence
MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFPADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGFWSRLLVRPKAFSFP
Homology
BLAST of HG10001919 vs. NCBI nr
Match:
XP_038900289.1 (uncharacterized protein LOC120087549 [Benincasa hispida])
HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47
Identity = 108/127 (85.04%), Postives = 111/127 (87.40%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSS-SADFFF 60
MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQS + SDSHST FSSSSS S+DFFF
Sbjct: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPVCSDSHSTFFSSSSSPSSDFFF 60
Query: 61 PADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAK-GGQKKKL 120
ADSS RRR HHRRNASE VTGSM AD FGD +KKSGSIRISAD GAGAK GG KKKL
Sbjct: 61 SADSSHRRR-RQHHRRNASEFVTGSMTADLFGDKMKKSGSIRISADGGAGAKGGGGKKKL 120
Query: 121 GFWSRLL 126
GFWSRLL
Sbjct: 121 GFWSRLL 126
BLAST of HG10001919 vs. NCBI nr
Match:
KAA0044717.1 (DUF740 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 196.1 bits (497), Expect = 2.0e-46
Identity = 104/133 (78.20%), Postives = 108/133 (81.20%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQS +SDS ST S SSSS+DFFF
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60
Query: 61 ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
ADSSRR R HHHRRNASE VTGSM D D LKKSGSIRISAD G GA KKKLGF
Sbjct: 61 ADSSRRHR-RHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGGTGAGVKGKKKLGF 120
Query: 121 WSRLLVRPKAFSF 134
WSRLL+RPKA F
Sbjct: 121 WSRLLLRPKALYF 132
BLAST of HG10001919 vs. NCBI nr
Match:
XP_008453802.1 (PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo] >TYK16870.1 DUF740 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 193.7 bits (491), Expect = 9.9e-46
Identity = 103/133 (77.44%), Postives = 107/133 (80.45%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQS +SDS ST S SSSS+DFFF
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60
Query: 61 ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
ADSSRR R HHHRRNASE VTGSM D D LKKSGSIRISAD GA KKKLGF
Sbjct: 61 ADSSRRHR-RHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGF 120
Query: 121 WSRLLVRPKAFSF 134
WSRLL+RPKA F
Sbjct: 121 WSRLLLRPKALYF 132
BLAST of HG10001919 vs. NCBI nr
Match:
XP_031745668.1 (uncharacterized protein LOC116406103 [Cucumis sativus] >XP_031745670.1 uncharacterized protein LOC116406105 [Cucumis sativus] >KAE8637171.1 hypothetical protein CSA_018802 [Cucumis sativus])
HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45
Identity = 102/133 (76.69%), Postives = 106/133 (79.70%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQS +SDS ST S SSSS+DFFF
Sbjct: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60
Query: 61 ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
ADSS RRH HHRRNASE VTGSM D D LKK+GSIRIS D G GA KKKLGF
Sbjct: 61 ADSS--RRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGF 120
Query: 121 WSRLLVRPKAFSF 134
WSRLL+RPKA F
Sbjct: 121 WSRLLLRPKALYF 131
BLAST of HG10001919 vs. NCBI nr
Match:
XP_011653117.2 (uncharacterized protein LOC105435176 [Cucumis sativus])
HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38
Identity = 91/120 (75.83%), Postives = 94/120 (78.33%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQS +SDS ST S SSSS+DFFF
Sbjct: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60
Query: 61 ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
ADSS RRH HHRRNASE VTGSM D D LKK+GSIRIS D G GA KK LGF
Sbjct: 61 ADSS--RRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKNLGF 118
BLAST of HG10001919 vs. ExPASy TrEMBL
Match:
A0A5A7TS78 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004740 PE=4 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 9.7e-47
Identity = 104/133 (78.20%), Postives = 108/133 (81.20%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQS +SDS ST S SSSS+DFFF
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60
Query: 61 ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
ADSSRR R HHHRRNASE VTGSM D D LKKSGSIRISAD G GA KKKLGF
Sbjct: 61 ADSSRRHR-RHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGGTGAGVKGKKKLGF 120
Query: 121 WSRLLVRPKAFSF 134
WSRLL+RPKA F
Sbjct: 121 WSRLLLRPKALYF 132
BLAST of HG10001919 vs. ExPASy TrEMBL
Match:
A0A5D3CZT1 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00010 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 4.8e-46
Identity = 103/133 (77.44%), Postives = 107/133 (80.45%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQS +SDS ST S SSSS+DFFF
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60
Query: 61 ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
ADSSRR R HHHRRNASE VTGSM D D LKKSGSIRISAD GA KKKLGF
Sbjct: 61 ADSSRRHR-RHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGF 120
Query: 121 WSRLLVRPKAFSF 134
WSRLL+RPKA F
Sbjct: 121 WSRLLLRPKALYF 132
BLAST of HG10001919 vs. ExPASy TrEMBL
Match:
A0A1S3BWL8 (uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 4.8e-46
Identity = 103/133 (77.44%), Postives = 107/133 (80.45%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQS +SDS ST S SSSS+DFFF
Sbjct: 1 MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60
Query: 61 ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
ADSSRR R HHHRRNASE VTGSM D D LKKSGSIRISAD GA KKKLGF
Sbjct: 61 ADSSRRHR-RHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGF 120
Query: 121 WSRLLVRPKAFSF 134
WSRLL+RPKA F
Sbjct: 121 WSRLLLRPKALYF 132
BLAST of HG10001919 vs. ExPASy TrEMBL
Match:
A0A0A0KZB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 6.3e-46
Identity = 102/133 (76.69%), Postives = 106/133 (79.70%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQS +SDS ST S SSSS+DFFF
Sbjct: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60
Query: 61 ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
ADSS RRH HHRRNASE VTGSM D D LKK+GSIRIS D G GA KKKLGF
Sbjct: 61 ADSS--RRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGF 120
Query: 121 WSRLLVRPKAFSF 134
WSRLL+RPKA F
Sbjct: 121 WSRLLLRPKALYF 131
BLAST of HG10001919 vs. ExPASy TrEMBL
Match:
A0A6J1JAI6 (uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218 PE=4 SV=1)
HSP 1 Score: 169.5 bits (428), Expect = 9.7e-39
Identity = 93/135 (68.89%), Postives = 102/135 (75.56%), Query Frame = 0
Query: 1 MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSI--HSDSHSTTFSSSSSSADFF 60
MGKSESAKECKRH NHN LPGICPSCLRE+LQQ QSS +SDS ST+ SS S++ F
Sbjct: 56 MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRSTSSSSFLKSSESF 115
Query: 61 FPADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKL 120
F ++S RRR H RNASELVTGSM AD FGD +KKS SIRISAD G G GG KKK+
Sbjct: 116 FSGNTSWRRR----HTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 175
Query: 121 GFWSRLLVRPKAFSF 134
GFWSR LVRPKA F
Sbjct: 176 GFWSRFLVRPKALYF 186
BLAST of HG10001919 vs. TAIR 10
Match:
AT5G65300.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 41.6 bits (96), Expect = 5.9e-04
Identity = 42/140 (30.00%), Postives = 61/140 (43.57%), Query Frame = 0
Query: 9 ECKRHPNHNLLPGICPSCLREKLQQFHQSS----IH--SDSHSTTFSSSSSSADFFFPAD 68
EC++H NH G+CP CLR+KL + ++ +H S S STT SSS SS PA
Sbjct: 2 ECRKH-NHQGNRGVCPCCLRDKLSRLPNTTSYYIVHRSSSSSSTTVSSSPSS-----PAV 61
Query: 69 SSRRRRHHHHHRRNASELVTGSM-----------------PADFFGDNLKKSGSIRISAD 126
RR E + G++ P D+ +L K + ++ +
Sbjct: 62 KDHRRAGSMSMSFAVREALNGNLIEALGGGLMKSRSMAHVPKDYIVRDLTKKKTEKLKST 121
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038900289.1 | 1.1e-47 | 85.04 | uncharacterized protein LOC120087549 [Benincasa hispida] | [more] |
KAA0044717.1 | 2.0e-46 | 78.20 | DUF740 domain-containing protein [Cucumis melo var. makuwa] | [more] |
XP_008453802.1 | 9.9e-46 | 77.44 | PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo] >TYK16870.1 DUF74... | [more] |
XP_031745668.1 | 1.3e-45 | 76.69 | uncharacterized protein LOC116406103 [Cucumis sativus] >XP_031745670.1 uncharact... | [more] |
XP_011653117.2 | 1.5e-38 | 75.83 | uncharacterized protein LOC105435176 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TS78 | 9.7e-47 | 78.20 | DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
A0A5D3CZT1 | 4.8e-46 | 77.44 | DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
A0A1S3BWL8 | 4.8e-46 | 77.44 | uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=... | [more] |
A0A0A0KZB2 | 6.3e-46 | 76.69 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1 | [more] |
A0A6J1JAI6 | 9.7e-39 | 68.89 | uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218... | [more] |
Match Name | E-value | Identity | Description | |
AT5G65300.1 | 5.9e-04 | 30.00 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... | [more] |