HG10001919 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10001919
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDUF740 domain-containing protein
LocationChr11: 1680798 .. 1681202 (-)
RNA-Seq ExpressionHG10001919
SyntenyHG10001919
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAATCGGAATCGGCAAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCTGGAATTTGCCCTTCCTGTCTTCGTGAAAAGCTTCAACAATTCCATCAATCTTCTATTCATTCCGATTCTCATTCAACTACCTTCTCTTCTTCTTCTTCTTCCGCTGATTTTTTCTTCCCCGCCGATTCCTCACGCCGCCGCCGCCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGCCTGCAGATTTTTTTGGGGACAACCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCCGATGCCGGCGCCGGCGCCAAAGGAGGACAAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTGGTCCGCCCGAAGGCTTTCTCTTTTCCTTGA

mRNA sequence

ATGGGGAAATCGGAATCGGCAAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCTGGAATTTGCCCTTCCTGTCTTCGTGAAAAGCTTCAACAATTCCATCAATCTTCTATTCATTCCGATTCTCATTCAACTACCTTCTCTTCTTCTTCTTCTTCCGCTGATTTTTTCTTCCCCGCCGATTCCTCACGCCGCCGCCGCCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGCCTGCAGATTTTTTTGGGGACAACCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCCGATGCCGGCGCCGGCGCCAAAGGAGGACAAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTGGTCCGCCCGAAGGCTTTCTCTTTTCCTTGA

Coding sequence (CDS)

ATGGGGAAATCGGAATCGGCAAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCTGGAATTTGCCCTTCCTGTCTTCGTGAAAAGCTTCAACAATTCCATCAATCTTCTATTCATTCCGATTCTCATTCAACTACCTTCTCTTCTTCTTCTTCTTCCGCTGATTTTTTCTTCCCCGCCGATTCCTCACGCCGCCGCCGCCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGCCTGCAGATTTTTTTGGGGACAACCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCCGATGCCGGCGCCGGCGCCAAAGGAGGACAAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTGGTCCGCCCGAAGGCTTTCTCTTTTCCTTGA

Protein sequence

MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFPADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGFWSRLLVRPKAFSFP
Homology
BLAST of HG10001919 vs. NCBI nr
Match: XP_038900289.1 (uncharacterized protein LOC120087549 [Benincasa hispida])

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47
Identity = 108/127 (85.04%), Postives = 111/127 (87.40%), Query Frame = 0

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSS-SADFFF 60
           MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQS + SDSHST FSSSSS S+DFFF
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPVCSDSHSTFFSSSSSPSSDFFF 60

Query: 61  PADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAK-GGQKKKL 120
            ADSS RRR   HHRRNASE VTGSM AD FGD +KKSGSIRISAD GAGAK GG KKKL
Sbjct: 61  SADSSHRRR-RQHHRRNASEFVTGSMTADLFGDKMKKSGSIRISADGGAGAKGGGGKKKL 120

Query: 121 GFWSRLL 126
           GFWSRLL
Sbjct: 121 GFWSRLL 126

BLAST of HG10001919 vs. NCBI nr
Match: KAA0044717.1 (DUF740 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 2.0e-46
Identity = 104/133 (78.20%), Postives = 108/133 (81.20%), Query Frame = 0

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
           MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQS  +SDS ST  S SSSS+DFFF 
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60

Query: 61  ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
           ADSSRR R  HHHRRNASE VTGSM  D   D LKKSGSIRISAD G GA    KKKLGF
Sbjct: 61  ADSSRRHR-RHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGGTGAGVKGKKKLGF 120

Query: 121 WSRLLVRPKAFSF 134
           WSRLL+RPKA  F
Sbjct: 121 WSRLLLRPKALYF 132

BLAST of HG10001919 vs. NCBI nr
Match: XP_008453802.1 (PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo] >TYK16870.1 DUF740 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 193.7 bits (491), Expect = 9.9e-46
Identity = 103/133 (77.44%), Postives = 107/133 (80.45%), Query Frame = 0

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
           MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQS  +SDS ST  S SSSS+DFFF 
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60

Query: 61  ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
           ADSSRR R  HHHRRNASE VTGSM  D   D LKKSGSIRISAD   GA    KKKLGF
Sbjct: 61  ADSSRRHR-RHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGF 120

Query: 121 WSRLLVRPKAFSF 134
           WSRLL+RPKA  F
Sbjct: 121 WSRLLLRPKALYF 132

BLAST of HG10001919 vs. NCBI nr
Match: XP_031745668.1 (uncharacterized protein LOC116406103 [Cucumis sativus] >XP_031745670.1 uncharacterized protein LOC116406105 [Cucumis sativus] >KAE8637171.1 hypothetical protein CSA_018802 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45
Identity = 102/133 (76.69%), Postives = 106/133 (79.70%), Query Frame = 0

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
           MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQS  +SDS ST  S SSSS+DFFF 
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60

Query: 61  ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
           ADSS  RRH  HHRRNASE VTGSM  D   D LKK+GSIRIS D G GA    KKKLGF
Sbjct: 61  ADSS--RRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGF 120

Query: 121 WSRLLVRPKAFSF 134
           WSRLL+RPKA  F
Sbjct: 121 WSRLLLRPKALYF 131

BLAST of HG10001919 vs. NCBI nr
Match: XP_011653117.2 (uncharacterized protein LOC105435176 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38
Identity = 91/120 (75.83%), Postives = 94/120 (78.33%), Query Frame = 0

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
           MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQS  +SDS ST  S SSSS+DFFF 
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60

Query: 61  ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
           ADSS  RRH  HHRRNASE VTGSM  D   D LKK+GSIRIS D G GA    KK LGF
Sbjct: 61  ADSS--RRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKNLGF 118

BLAST of HG10001919 vs. ExPASy TrEMBL
Match: A0A5A7TS78 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004740 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 9.7e-47
Identity = 104/133 (78.20%), Postives = 108/133 (81.20%), Query Frame = 0

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
           MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQS  +SDS ST  S SSSS+DFFF 
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60

Query: 61  ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
           ADSSRR R  HHHRRNASE VTGSM  D   D LKKSGSIRISAD G GA    KKKLGF
Sbjct: 61  ADSSRRHR-RHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGGTGAGVKGKKKLGF 120

Query: 121 WSRLLVRPKAFSF 134
           WSRLL+RPKA  F
Sbjct: 121 WSRLLLRPKALYF 132

BLAST of HG10001919 vs. ExPASy TrEMBL
Match: A0A5D3CZT1 (DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00010 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.8e-46
Identity = 103/133 (77.44%), Postives = 107/133 (80.45%), Query Frame = 0

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
           MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQS  +SDS ST  S SSSS+DFFF 
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60

Query: 61  ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
           ADSSRR R  HHHRRNASE VTGSM  D   D LKKSGSIRISAD   GA    KKKLGF
Sbjct: 61  ADSSRRHR-RHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGF 120

Query: 121 WSRLLVRPKAFSF 134
           WSRLL+RPKA  F
Sbjct: 121 WSRLLLRPKALYF 132

BLAST of HG10001919 vs. ExPASy TrEMBL
Match: A0A1S3BWL8 (uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.8e-46
Identity = 103/133 (77.44%), Postives = 107/133 (80.45%), Query Frame = 0

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
           MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQS  +SDS ST  S SSSS+DFFF 
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60

Query: 61  ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
           ADSSRR R  HHHRRNASE VTGSM  D   D LKKSGSIRISAD   GA    KKKLGF
Sbjct: 61  ADSSRRHR-RHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGF 120

Query: 121 WSRLLVRPKAFSF 134
           WSRLL+RPKA  F
Sbjct: 121 WSRLLLRPKALYF 132

BLAST of HG10001919 vs. ExPASy TrEMBL
Match: A0A0A0KZB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.3e-46
Identity = 102/133 (76.69%), Postives = 106/133 (79.70%), Query Frame = 0

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSIHSDSHSTTFSSSSSSADFFFP 60
           MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQS  +SDS ST  S SSSS+DFFF 
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFS 60

Query: 61  ADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKLGF 120
           ADSS  RRH  HHRRNASE VTGSM  D   D LKK+GSIRIS D G GA    KKKLGF
Sbjct: 61  ADSS--RRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGF 120

Query: 121 WSRLLVRPKAFSF 134
           WSRLL+RPKA  F
Sbjct: 121 WSRLLLRPKALYF 131

BLAST of HG10001919 vs. ExPASy TrEMBL
Match: A0A6J1JAI6 (uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 9.7e-39
Identity = 93/135 (68.89%), Postives = 102/135 (75.56%), Query Frame = 0

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSSI--HSDSHSTTFSSSSSSADFF 60
           MGKSESAKECKRH NHN LPGICPSCLRE+LQQ  QSS   +SDS ST+ SS   S++ F
Sbjct: 56  MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRSTSSSSFLKSSESF 115

Query: 61  FPADSSRRRRHHHHHRRNASELVTGSMPADFFGDNLKKSGSIRISADAGAGAKGGQKKKL 120
           F  ++S RRR    H RNASELVTGSM AD FGD +KKS SIRISAD G G  GG KKK+
Sbjct: 116 FSGNTSWRRR----HTRNASELVTGSMAADLFGDKVKKSSSIRISADGGGGGGGGGKKKV 175

Query: 121 GFWSRLLVRPKAFSF 134
           GFWSR LVRPKA  F
Sbjct: 176 GFWSRFLVRPKALYF 186

BLAST of HG10001919 vs. TAIR 10
Match: AT5G65300.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 5.9e-04
Identity = 42/140 (30.00%), Postives = 61/140 (43.57%), Query Frame = 0

Query: 9   ECKRHPNHNLLPGICPSCLREKLQQFHQSS----IH--SDSHSTTFSSSSSSADFFFPAD 68
           EC++H NH    G+CP CLR+KL +   ++    +H  S S STT SSS SS     PA 
Sbjct: 2   ECRKH-NHQGNRGVCPCCLRDKLSRLPNTTSYYIVHRSSSSSSTTVSSSPSS-----PAV 61

Query: 69  SSRRRRHHHHHRRNASELVTGSM-----------------PADFFGDNLKKSGSIRISAD 126
              RR           E + G++                 P D+   +L K  + ++ + 
Sbjct: 62  KDHRRAGSMSMSFAVREALNGNLIEALGGGLMKSRSMAHVPKDYIVRDLTKKKTEKLKST 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038900289.11.1e-4785.04uncharacterized protein LOC120087549 [Benincasa hispida][more]
KAA0044717.12.0e-4678.20DUF740 domain-containing protein [Cucumis melo var. makuwa][more]
XP_008453802.19.9e-4677.44PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo] >TYK16870.1 DUF74... [more]
XP_031745668.11.3e-4576.69uncharacterized protein LOC116406103 [Cucumis sativus] >XP_031745670.1 uncharact... [more]
XP_011653117.21.5e-3875.83uncharacterized protein LOC105435176 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TS789.7e-4778.20DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A5D3CZT14.8e-4677.44DUF740 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3BWL84.8e-4677.44uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=... [more]
A0A0A0KZB26.3e-4676.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1[more]
A0A6J1JAI69.7e-3968.89uncharacterized protein LOC111483218 OS=Cucurbita maxima OX=3661 GN=LOC111483218... [more]
Match NameE-valueIdentityDescription
AT5G65300.15.9e-0430.00unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008004Protein OCTOPUS-likePFAMPF05340DUF740coord: 6..63
e-value: 2.4E-8
score: 33.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..55
NoneNo IPR availablePANTHERPTHR34046OS06G0218800 PROTEINcoord: 1..125
NoneNo IPR availablePANTHERPTHR34046:SF18RAPIDLY ELICITED PROTEIN, PUTATIVE-RELATEDcoord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10001919.1HG10001919.1mRNA