HG10001830 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCGAACCGCGGCCCAAACGAAACTAAACCACTTGAGAAATCCAAACAGTAACTCCACGCAAGAGGTCCACCAAAGCGGATCACGTGTCATAATCTCATAGGTTCAATCCTCAACGTTGACTTTTGGTTTGAAACTGACCCAATCCCCTGACGACACGTCGTTCAAAGGCGAACCCCCATCTTTACATCCTGAACCCGACCACCGCCACCACCGCCTCTCCCTCTCCTCTCTCCGTTTCGAATCCCTCTCTCTCCCTCTCTCTGCCACTACGATCAAATACCCTCCTGATTTCTTTTTCAGTAAGTCTCTGTTTTCTTATCTTTGAGTGATTAATTGATTAATTGGGAATTCCAGTTTCTGAACGGAGTTTTTGTATTTGCAATTGACATTTTCGTCGTCGTTTTGATTTTGAGTCTTTTTGGTTTGATAGTTTATGGGTTTTGAGAGTGAGTTTTTTTGGTGGGTAATCGTGAAATTTTGTTGCCTTTTTGTGTGCTTTCTTTGTTTGGGAGATTGGGGGCAAAAAAAAAATTTAGGGATGTTGTTTAAATGGAAGGAACATGCGTCTGTAGTTTGTTCCTTGAAATTAATGATTGTCTCTCTGCTGAAAAACGTGGATGAGATTTGAATGAAACGAACGTTTGTTTTATGGACGTTTGAGAATTTTTTTTCTTTTTTCTTTTTTTAATTATTTGAATCGCTTCTGGGTTATGTGACTTGGGTCCTGTTGCTTTCCCTTTTTCAGTTACTTTTGTTTATGGAGATAGCATTGAACTTTTGAAGGATTTATGAATTGTTGGCATTTATAGGAGGAATAAACTCATCAATCAACCAAGTAGAGATATTTTCTTGGTTTAACCATTTAGACAGGGCATACTGACTTAGTTACCGTGTTAACTTGTGTCATGTCTGGCTTCTCACCCCTGAGTGAACAGAATATGCCTGTATACAAGATCAGTCTTCATTTGTTTATTTATTTTCGTTTTGGTAATGGCATTTTCTGAAAATGGTTTGATTGTTGGCTGCAGTGGAGTTTGGGGTTGATGGTGATAGTGAGGTGGTGGGAAATTCGACTCTGGTGGAGGATAGTAAACCTCTTGATGAAACTGAAACAGGTGTAAGTTCTATTGAAAGGATTTTTGATCAGGACCAGGATGAGAAAATAATACAAGATTCATCTGGAAGGAATGCAATTTTGGATTCAGTTCCTGGATTACCCATAGTTCAAGCAGATGAGCCTTATGTTGGTCAGGAATTTGAAAATGAGGCAGCAGCTCATGCATTTTATAATTCTTATGCTACTCGTGTGGGATTTGTAATTCGTGTTAGCAAGCTCTCGCGATCAAGACGTGATGGGACGGCTATTGGTCGTGCACTAGTTTGCAACAAAGAAGGGTACAGAATGCCGGACAAGCGGGAAAAGATTGTGAGGCAGAGGGCAGAGACGAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGAAAAGTAAATTCTGGTAAATGGGTTGTCACTAAATTTGTAAAAGAGCATACTCATCCTTTATCACCTGGGAAAGGTCGAAGAGATTGCATATACGACCAATATCCGGTAAGTTCTTCTTCCATATACCAATGTTTGCATATTCAATTCCTGACACAGCAACACATGTTCTGATTGTAATCTGGCGGGCACTAGTTGTAAAATGGATTCTCTTTGAATGAATCATCTGGCTATTTACTGTTTAAGCTTTCTTCAGTAATTTTTAAGTGAAAAAAGAAGTAAAATGGTCAATGCAGATATTTGAAACCAGTATTTAGTTTATCGTTGTTGCTTTATTTGAGGCAGGTACAATTACCTAGACATCCTCTATCGTCCATCTTCAACTCCCCCATCCTCCATAGAGGTGTGGACACAGATAAAGAAAAGCTTAGTGTGTAGCATTTTATAAGATTTGAAGTATTTCATTAAATAAGTTTTGGAGATGTAGGACTTTTAGTTCCAGAAATTGGTCTACCATAATGAATGAAAATCACACAAGTTATATAAGAAGGTTCTATAGAGTGCCTCTTGTATGGATGATAGATCAATTGCACGGTTTTTTATTATTATTATTATTTAATTTTTTGTTGTGCTTTTTATTGATATTATCCTATCAAATATGTAGAACTTCTTATTAGAAATGTTGAATTTAGGGAAAAAATGAAGTGTAGTACATAGACTGTTAATGGAATTTTCAAATCAGAGATTAGTATCCTTTCGCCCTTAGCATATGTTTCTGATGGGATGGCCCAAAGCTGCAGTCTAGCATCCAGAAGAAATTGGGGGACGCAGTTGAGTGGACTTGTTACCTATTCTGGCCTGCTCAAGGCCCCTTGGACCTTCTCAAGATTTCACAATCTAAATTTGGAAGCTTCAGGGAATTATTTTCTGGTTTGGTGTTTAGTTATCTGCTGCAAGCCTGCAAGTAACTAGAGTCATGAATCATGATTTGACTATGTTAAGGTTTTAATGGTAAACAGAATCTCTCATGAAAAGATGATAGAAATGAGACAGAAACTCTCAAAGCTGATTAGGTCTACAAAAATCTCCCCAGTCAACAGGAATTGAAGAGACATCGTAATCACCATAAGAGAAATGATATATCAATTTGATACCAAGAAAAAGCTGCCTAAATAACATTTTTTAAGGCCCATCAAAGTTTCTATAAATCCCCCAAGAATTATTTTTTATAGGAAACAAAAATTTCATTTATGGGATGAAACTACACAAATGGTCCTATCCAATGGACTACAAAAAAAAAAATCCTCCAATTGGCCATAAGATTAGTTAAACTAAAGTTACAATAAGGGGAGCTCGATTTACACCAACTAAGAGAAAGAAAAGTAGTAGAAGTGAGAGTTGTATAGAAGTCTTGTTCCTTATCTGTAAAGGCTTGGGGATTCTATAAATCCACAAGAATGATGTTCTGCGCTTTTCTAACTATATTCCCAAACAGAAGCCTTCAGGGCATGAACCATTGGTGATTTGGAGGTTAATATCCTCAAAGATGATCCGGTTTTCATGTGGATAGCGGAGGAAATTTTACTCTAGAACACTTAAACTATTTCCCTCTTTAGTCATTGCTTCTTGAGCCTCCAATTTGTGCATTTGGTGGAAAAGCATGTGAATTTGTTAATAATATGTTTGTATATATTAATTCGAGGAAATACCTAAACATTTGATGATTTCTCATCAGTAGAAGATTTAGTAAGCTAGTGCACGTGGTCTATTTCTCAAGGAGACACCTAGTATCTCTATTATTGAATTTGATCTTTCCCACACTTTTGGAATTGAAAATTTAGGGATTTGAAAGCTTTTGAAGATTTTGGCGGGGATGGGATACAGGTGAGGTTTGGCATCATGCGTATTTTAGTATGCCTTTTTGGGTTTCATCACCAAAAGGAAAAGAATAAAAAGTTCCTAGGCATTTAGGTCGAAGCTGACTTCTCAGGTGCTTGAGTTGAAAAATGTAAAAGCTATAACTATTACTTCTCTGATTGAATGATATTTTCTAGTCAAAGAGTAAACTTGAAGTGGTTATGATTGTCCATTCAAATGTGGTTCCTCTGCAAACTTTTATGTTATTGTAACAACTTATATGATGAACTTAGCATTATCGGTTAGGTTGCACATTTCTCATTAATATACTAAAAGTATGGTTCATGTCGTCTCTTCCCTCTTGGAACTGATTTGTACATCTTTGTTTCAATCTGAACAGATGGTTTTTAATAAAGAAAATGATGGTGGCCATAATTAGTTCTTCCACCTTTTCTTTATAACGGTGCCTTAGACAACAAATTTTTTGTAACTATAGCCTTGGTTTAATCTTTCCAGATTGGAAGGTGGTGCTTCACTAGTTTTTCTTTGGGAGGGACCCTCTCATCCCCCTACCCCTAGACTGTTTTTGTCCTCCTTTCTGTGATTAACTCCATATTTTTATTGTTTCATATCAAAATAATAATAATAAAAAAGAGATTTGCTGTCTTATTTGTTGCATGACTTGCCATAAAGATTGCACTCTTGATCTTATCTTCTGCCTGAGCAGTTCTTTAGCTTGTGTTATGTCATATGTGTGGCCTGTCTCTTTGAACAGTATGTGCCTTTTAAGCTTGGGGATTTCTCCTGGTGTGTTTAACATGGCTAGAAACTGAGCTTTTGAATAGTGATACTCAAGAGGAGTATAGAGCTTGGTTGAATCATGTAACCAACGTCCTTGGTCGGAATCCACTTCCCATTTGAAATCCTTGGCTTTGGTTTCTTCTTTTTTAGCTTAAGCTTTTGACTCATATAGAATATCCTATAATAGGAAGTGGAGGGATTTGAAACTAGGACCCCATAAGAGGAAGTTGGAATACCTTAACCGTTGAGCTAAGCTTATGACAGTGCTTTTGATTTTTCTTATAACTCATGATTAACAAAGATTAGTTATTTTCTGACGATTCTTCATACATAAACAGAGCTTTTAAATCATAAAACAATGCGTATTTCCCTTGACTAACATGAAGCACTGTGTAGAGGGTGACTTTGATATTAGGAGCTCAATTATGTGACTTTGATATTCATAGCCTCATAAAGGTTTTTACTCTTTTTAGTCTTATATTGTAATTGTAAATGGCATACAACAGTGCATACATTGAATTACTCTTTAACTCAACTTTTGCCATCCTTGTGTTGCAGAATGAACACGATAAGATACGCGAACTGTCTCAACAGCTAGCAATTGAGAAAAAGCGATCTGCAACATATAAAAGGCATCTAGAAGTAATATTCGAATACATCGAGGAGCATAACAATAACTTGTCGAGAAAGATCCAACATATAGTAGAGAATGTGAAGGAGATGGAAAGCATAGAACAGCAGCAGAATCATAGATAG ATGGACCGAACCGCGGCCCAAACGAAACTAAACCACTTGAGAAATCCAAACATGGAGTTTGGGGTTGATGGTGATAGTGAGGTGGTGGGAAATTCGACTCTGGTGGAGGATAGTAAACCTCTTGATGAAACTGAAACAGGTGTAAGTTCTATTGAAAGGATTTTTGATCAGGACCAGGATGAGAAAATAATACAAGATTCATCTGGAAGGAATGCAATTTTGGATTCAGTTCCTGGATTACCCATAGTTCAAGCAGATGAGCCTTATGTTGGTCAGGAATTTGAAAATGAGGCAGCAGCTCATGCATTTTATAATTCTTATGCTACTCGTGTGGGATTTGTAATTCGTGTTAGCAAGCTCTCGCGATCAAGACGTGATGGGACGGCTATTGGTCGTGCACTAGTTTGCAACAAAGAAGGGTACAGAATGCCGGACAAGCGGGAAAAGATTGTGAGGCAGAGGGCAGAGACGAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGAAAAGTAAATTCTGGTAAATGGGTTGTCACTAAATTTGTAAAAGAGCATACTCATCCTTTATCACCTGGGAAAGGTCGAAGAGATTGCATATACGACCAATATCCGAATGAACACGATAAGATACGCGAACTGTCTCAACAGCTAGCAATTGAGAAAAAGCGATCTGCAACATATAAAAGGCATCTAGAAGTAATATTCGAATACATCGAGGAGCATAACAATAACTTGTCGAGAAAGATCCAACATATAGTAGAGAATGTGAAGGAGATGGAAAGCATAGAACAGCAGCAGAATCATAGATAG ATGGACCGAACCGCGGCCCAAACGAAACTAAACCACTTGAGAAATCCAAACATGGAGTTTGGGGTTGATGGTGATAGTGAGGTGGTGGGAAATTCGACTCTGGTGGAGGATAGTAAACCTCTTGATGAAACTGAAACAGGTGTAAGTTCTATTGAAAGGATTTTTGATCAGGACCAGGATGAGAAAATAATACAAGATTCATCTGGAAGGAATGCAATTTTGGATTCAGTTCCTGGATTACCCATAGTTCAAGCAGATGAGCCTTATGTTGGTCAGGAATTTGAAAATGAGGCAGCAGCTCATGCATTTTATAATTCTTATGCTACTCGTGTGGGATTTGTAATTCGTGTTAGCAAGCTCTCGCGATCAAGACGTGATGGGACGGCTATTGGTCGTGCACTAGTTTGCAACAAAGAAGGGTACAGAATGCCGGACAAGCGGGAAAAGATTGTGAGGCAGAGGGCAGAGACGAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGAAAAGTAAATTCTGGTAAATGGGTTGTCACTAAATTTGTAAAAGAGCATACTCATCCTTTATCACCTGGGAAAGGTCGAAGAGATTGCATATACGACCAATATCCGAATGAACACGATAAGATACGCGAACTGTCTCAACAGCTAGCAATTGAGAAAAAGCGATCTGCAACATATAAAAGGCATCTAGAAGTAATATTCGAATACATCGAGGAGCATAACAATAACTTGTCGAGAAAGATCCAACATATAGTAGAGAATGTGAAGGAGATGGAAAGCATAGAACAGCAGCAGAATCATAGATAG MDRTAAQTKLNHLRNPNMEFGVDGDSEVVGNSTLVEDSKPLDETETGVSSIERIFDQDQDEKIIQDSSGRNAILDSVPGLPIVQADEPYVGQEFENEAAAHAFYNSYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKGRRDCIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIEEHNNNLSRKIQHIVENVKEMESIEQQQNHR Homology
BLAST of HG10001830 vs. NCBI nr
Match: KAG6582075.1 (Protein FAR1-RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 483.4 bits (1243), Expect = 1.3e-132 Identity = 251/273 (91.94%), Postives = 262/273 (95.97%), Query Frame = 0
BLAST of HG10001830 vs. NCBI nr
Match: XP_038876355.1 (protein FAR1-RELATED SEQUENCE 6-like [Benincasa hispida]) HSP 1 Score: 477.6 bits (1228), Expect = 6.9e-131 Identity = 244/251 (97.21%), Postives = 248/251 (98.80%), Query Frame = 0
BLAST of HG10001830 vs. NCBI nr
Match: XP_022138245.1 (protein FAR1-RELATED SEQUENCE 6 [Momordica charantia]) HSP 1 Score: 475.7 bits (1223), Expect = 2.6e-130 Identity = 242/251 (96.41%), Postives = 248/251 (98.80%), Query Frame = 0
BLAST of HG10001830 vs. NCBI nr
Match: XP_004152087.1 (protein FAR1-RELATED SEQUENCE 6 [Cucumis sativus] >KAE8649125.1 hypothetical protein Csa_015283 [Cucumis sativus]) HSP 1 Score: 474.6 bits (1220), Expect = 5.8e-130 Identity = 242/251 (96.41%), Postives = 248/251 (98.80%), Query Frame = 0
BLAST of HG10001830 vs. NCBI nr
Match: XP_008453933.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 6 [Cucumis melo]) HSP 1 Score: 474.2 bits (1219), Expect = 7.6e-130 Identity = 241/251 (96.02%), Postives = 248/251 (98.80%), Query Frame = 0
BLAST of HG10001830 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.1e-25 Identity = 63/108 (58.33%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of HG10001830 vs. ExPASy Swiss-Prot
Match: Q9M8J3 (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.7e-18 Identity = 46/102 (45.10%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of HG10001830 vs. ExPASy Swiss-Prot
Match: Q3E7I5 (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.6e-16 Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of HG10001830 vs. ExPASy Swiss-Prot
Match: Q9SSQ4 (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.6e-13 Identity = 60/190 (31.58%), Postives = 91/190 (47.89%), Query Frame = 0
BLAST of HG10001830 vs. ExPASy Swiss-Prot
Match: Q9S793 (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana OX=3702 GN=FRS8 PE=2 SV=2) HSP 1 Score: 74.3 bits (181), Expect = 2.3e-12 Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of HG10001830 vs. ExPASy TrEMBL
Match: A0A0A0KZ37 (FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G017090 PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 1.3e-130 Identity = 245/259 (94.59%), Postives = 253/259 (97.68%), Query Frame = 0
BLAST of HG10001830 vs. ExPASy TrEMBL
Match: A0A6J1C8X6 (protein FAR1-RELATED SEQUENCE 6 OS=Momordica charantia OX=3673 GN=LOC111009466 PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 1.3e-130 Identity = 242/251 (96.41%), Postives = 248/251 (98.80%), Query Frame = 0
BLAST of HG10001830 vs. ExPASy TrEMBL
Match: A0A1S3BY81 (protein FAR1-RELATED SEQUENCE 6 OS=Cucumis melo OX=3656 GN=LOC103494508 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 3.7e-130 Identity = 241/251 (96.02%), Postives = 248/251 (98.80%), Query Frame = 0
BLAST of HG10001830 vs. ExPASy TrEMBL
Match: A0A6J1EXF3 (protein FAR1-RELATED SEQUENCE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111439106 PE=4 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 5.3e-129 Identity = 238/251 (94.82%), Postives = 244/251 (97.21%), Query Frame = 0
BLAST of HG10001830 vs. ExPASy TrEMBL
Match: A0A6J1GW29 (protein FAR1-RELATED SEQUENCE 6-like OS=Cucurbita moschata OX=3662 GN=LOC111457418 PE=4 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 2.6e-128 Identity = 240/251 (95.62%), Postives = 248/251 (98.80%), Query Frame = 0
BLAST of HG10001830 vs. TAIR 10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 302.4 bits (773), Expect = 3.7e-82 Identity = 153/235 (65.11%), Postives = 187/235 (79.57%), Query Frame = 0
BLAST of HG10001830 vs. TAIR 10
Match: AT3G59470.2 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 302.4 bits (773), Expect = 3.7e-82 Identity = 153/235 (65.11%), Postives = 187/235 (79.57%), Query Frame = 0
BLAST of HG10001830 vs. TAIR 10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 159.1 bits (401), Expect = 5.0e-39 Identity = 88/207 (42.51%), Postives = 139/207 (67.15%), Query Frame = 0
BLAST of HG10001830 vs. TAIR 10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 136.0 bits (341), Expect = 4.6e-32 Identity = 79/183 (43.17%), Postives = 113/183 (61.75%), Query Frame = 0
BLAST of HG10001830 vs. TAIR 10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 125.6 bits (314), Expect = 6.2e-29 Identity = 68/177 (38.42%), Postives = 107/177 (60.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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