HG10001527 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10001527
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	zinc finger CCCH domain-containing protein 25
Location	Chr09: 17843464 .. 17846171 (-)
RNA-Seq Expression	HG10001527
Synteny	HG10001527

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCTCTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAAGAGGCCTCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCCTACGTTTTTGTTGGAGGCATTCCTTATGATCTCACTGAAGGCGATCTCCTCGCCGTCTTCGCCCAGTAAGTTCATAATTCTATCTATGTTCTCCCCCATCGTCGTTTTGATTGTGTTCTCCTGCGGCTCTCTGTTCTTATTTACTTGATAGATTATGTAGATGGGTTAGTTAAGATTGAGATGTTGTGCTGGATTTGTGTGTTCAACATTGAAATGTTGTGCTCTATATTCTTATGTCATCAAAATTGATTTTGAATGATTAAAAACATGCTCAGAAGTGATTATATAAACGTCAAAAGTAATTTTAACCATTTCAGAATCACTCCCAAACATGCTCGTACCCTTAGCTATTTTGTATTGGTAACTTAAGAGATGGAGTTGATGTTTCAAGTTGTGCAGCTCATGCTTAACTAAAGAGACTAATTGAACTCGTGTTTGCTAGTCCAGTAGATTTTGTTGTTCCTTGTATCGTCAGCTTGGAAAAAAGCTTCTCACTCCTTCTTCTCCTTTTTCTCTAGAGAATCATACACGTTTATTTTTTTTCATTTAGATCCTTTTTAGAATTCATCTTCCTTGGATCTTGAAGGGGGCAACCATATGACAAGGGGTTGGGATGTTTGGAGATACCGCTCGAGGTCTTAGGTTTGAAGTCTCATGTGAAAAACTGAGGCCCTGTTTGGTTTTTTGTTTTTAGTTTGTGAAAATTAAGCCTATAAACATCCATTTCACCTCTAAATTTCTTCATTTGTTATCTATTTTTTACCAATGTTTTAAAAAACTAAACCAAGTTTTTAAAATTTATTTTTGTTTTTGAAATTTGACTAAGAATTCAACTCTTTTACTTAAAAAATATGCAAACCGTAAGAAATTGAGAGGAAATAGGCTTGATTTTCAAAAATAAAAAACCAAAAACCAAATGGTTACTAAAAAGTTCCTACCTACTCAAGACGTTGGTTTTCTTCTCTGGAGCTAGCCTTGGAGTGGGGAAAGCCTCTCAAAGATTAGTGGGGGTAGGTTCTGTGCATAATGCAAGAAGAGCTCTTTGATATCTTGATATGTGTGTGTGTGTATATATATATATGTATAATCACATTCGTTCCAATTAATACAAGAGTATTCTTCTTCCTTGTCACTGTTTAGCTGTCTGCAAATTCATTTTAAGGTTAGATATTAGCTTGTGGATCATTTTCTTTCTGAATATTAAAATGTACTTCAACGTACAGGTATGGAGAGATTGTTGATGTTAATCTTATCAGAGACAAGGGTACAGGAAAATCAAAAGGCTTTGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGGTTGTCTTCGTCTCCTCGCTCTAAACTGTTAATCGTTTTATGGGACTAAATGCAGATCTCTAAGTAATAGTATTTGTCTCTTTCAGATAATTTGAATGGAGCACAGATTCTAGGTCGAATCATTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAAGAAGATGAAGAAGAAGAACAGAAAAAGAGGGAAGCTCGGGGTGTTTGTCGTGCATTTCAAAGGGGTGAATGTACCCGTGGAGCTGGATGCAAATTCTCCCACGATGAGCAGGTATGTCCGAGACCTCCTATTTTGTGAGTGTGACAGTTTGTTACCGGGGAGGGGGGAAGGTGTGATGTACAGAAAAGGAAGTCTGATGATTTTTGCAGGGGAGATCTGTTTGTTTCATGGGATTCTTGTTTAACTTTTACCTTTAATGTTATTAGCTACCTATACTTGACTAGAAGAAGTTTGAAGACAAATACTTTCTTCGGCATGCTTGGATTAGAGTTTTAGCTTCACTTTAGAAATTTGATGTATGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGAGAGCTGCAAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTCGACGATCGAAAAGATCATGACAGAGAATTGCGTGCAAAAGGAAGGAAAAATAGTGATGACTTAGAAAGACATCCAAGGGAAGCTAGTGGGAGGCTGAGGCAGGAGAATAAACTGAAAGGTTGGGATGGTAGTAAAGATTCAGAACTCAAGTCAAGAGAGGACCTTGGGAGAAAAGATGAGAAGAGGTTGAGAAGACATGATCTTGATGGAAATCGTCAACCGAAGTCAGGAGATGATCATTATAATAGGGAAGAGAAGAGATCTAGAAGGAACTTCGATGATAATGGGAAAGAAGAGAAGAGATTGAGAAAACATGATGACGATGATGAGACGAAATTAGAAGACGATGGCTATAAGAAGGAAGAAAATAGATATAGAAGGAACCAAGACAATGAACTCCCTCATCATTCAAGAAGAGACTACAATACGAGGGAAGAAGACAGATTGAAAAGGCATGGCGATGGAGAGTATCAAACAAAGCTGGGGGAAGATGATAAAAGAAGGGAAAAAGATATATCGGTAAGGCATCGCTCAGAATCACATAGGAGGGACAATCCAGATGAGAAGAGAGATTATCGATCCTCTCATGGTAGAGATTCTTCATCACACTCTCATAGAGATAGAAACGAAGACCGTCGTAGATAA

mRNA sequence

ATGAATCCTCTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAAGAGGCCTCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCCTACGTTTTTGTTGGAGGCATTCCTTATGATCTCACTGAAGGCGATCTCCTCGCCGTCTTCGCCCAGTATGGAGAGATTGTTGATGTTAATCTTATCAGAGACAAGGGTACAGGAAAATCAAAAGGCTTTGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGATAATTTGAATGGAGCACAGATTCTAGGTCGAATCATTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAAGAAGATGAAGAAGAAGAACAGAAAAAGAGGGAAGCTCGGGGTGTTTGTCGTGCATTTCAAAGGGGTGAATGTACCCGTGGAGCTGGATGCAAATTCTCCCACGATGAGCAGAGAGCTGCAAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTCGACGATCGAAAAGATCATGACAGAGAATTGCGTGCAAAAGGAAGGAAAAATAGTGATGACTTAGAAAGACATCCAAGGGAAGCTAGTGGGAGGCTGAGGCAGGAGAATAAACTGAAAGGTTGGGATGGTAGTAAAGATTCAGAACTCAAGTCAAGAGAGGACCTTGGGAGAAAAGATGAGAAGAGGTTGAGAAGACATGATCTTGATGGAAATCGTCAACCGAAGTCAGGAGATGATCATTATAATAGGGAAGAGAAGAGATCTAGAAGGAACTTCGATGATAATGGGAAAGAAGAGAAGAGATTGAGAAAACATGATGACGATGATGAGACGAAATTAGAAGACGATGGCTATAAGAAGGAAGAAAATAGATATAGAAGGAACCAAGACAATGAACTCCCTCATCATTCAAGAAGAGACTACAATACGAGGGAAGAAGACAGATTGAAAAGGCATGGCGATGGAGAGTATCAAACAAAGCTGGGGGAAGATGATAAAAGAAGGGAAAAAGATATATCGGTAAGGCATCGCTCAGAATCACATAGGAGGGACAATCCAGATGAGAAGAGAGATTATCGATCCTCTCATGGTAGAGATTCTTCATCACACTCTCATAGAGATAGAAACGAAGACCGTCGTAGATAA

Coding sequence (CDS)

ATGAATCCTCTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAAGAGGCCTCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCCTACGTTTTTGTTGGAGGCATTCCTTATGATCTCACTGAAGGCGATCTCCTCGCCGTCTTCGCCCAGTATGGAGAGATTGTTGATGTTAATCTTATCAGAGACAAGGGTACAGGAAAATCAAAAGGCTTTGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGATAATTTGAATGGAGCACAGATTCTAGGTCGAATCATTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAAGAAGATGAAGAAGAAGAACAGAAAAAGAGGGAAGCTCGGGGTGTTTGTCGTGCATTTCAAAGGGGTGAATGTACCCGTGGAGCTGGATGCAAATTCTCCCACGATGAGCAGAGAGCTGCAAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTCGACGATCGAAAAGATCATGACAGAGAATTGCGTGCAAAAGGAAGGAAAAATAGTGATGACTTAGAAAGACATCCAAGGGAAGCTAGTGGGAGGCTGAGGCAGGAGAATAAACTGAAAGGTTGGGATGGTAGTAAAGATTCAGAACTCAAGTCAAGAGAGGACCTTGGGAGAAAAGATGAGAAGAGGTTGAGAAGACATGATCTTGATGGAAATCGTCAACCGAAGTCAGGAGATGATCATTATAATAGGGAAGAGAAGAGATCTAGAAGGAACTTCGATGATAATGGGAAAGAAGAGAAGAGATTGAGAAAACATGATGACGATGATGAGACGAAATTAGAAGACGATGGCTATAAGAAGGAAGAAAATAGATATAGAAGGAACCAAGACAATGAACTCCCTCATCATTCAAGAAGAGACTACAATACGAGGGAAGAAGACAGATTGAAAAGGCATGGCGATGGAGAGTATCAAACAAAGCTGGGGGAAGATGATAAAAGAAGGGAAAAAGATATATCGGTAAGGCATCGCTCAGAATCACATAGGAGGGACAATCCAGATGAGAAGAGAGATTATCGATCCTCTCATGGTAGAGATTCTTCATCACACTCTCATAGAGATAGAAACGAAGACCGTCGTAGATAA

Protein sequence

MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEEEDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFDDRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEKRLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKKEENRYRRNQDNELPHHSRRDYNTREEDRLKRHGDGEYQTKLGEDDKRREKDISVRHRSESHRRDNPDEKRDYRSSHGRDSSSHSHRDRNEDRRR

Homology

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BLAST of HG10001527 vs. NCBI nr
Match: XP_038902704.1 (zinc finger CCCH domain-containing protein 25-like [Benincasa hispida])

HSP 1 Score: 655.2 bits (1689), Expect = 3.5e-184
Identity = 355/393 (90.33%), Postives = 367/393 (93.38%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKIN+QEASLGISEEASWHAKYKDSAYVF GGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINAQEASLGISEEASWHAKYKDSAYVFAGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHV  YKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVHNYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
           DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWD SK+ ELKSRED   KDEK
Sbjct: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDDSKELELKSREDHDWKDEK 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKKE 300
           R RRHDLDG+R+ KSGDD+YNREEKR +RN DDNGKEEKRLRK  DDDETKLED+ Y KE
Sbjct: 241 RSRRHDLDGSRELKSGDDYYNREEKRFKRNHDDNGKEEKRLRKR-DDDETKLEDNRYMKE 300

Query: 301 ENRYRRNQDNELPHHSRRDYNTREEDRLKRHGDGEYQTKLGEDDKRREKDISVRHRSESH 360
           ENRYRRNQD ELP HS+RDYN REEDR KRHGD EY  K  +DD RREKDISVRHRSESH
Sbjct: 301 ENRYRRNQDYELPQHSKRDYN-REEDRSKRHGDDEYWPKRRDDDSRREKDISVRHRSESH 360

Query: 361 RRDNPDEKRDYRSSHGRDSSSHSHRDRNEDRRR 394
           RR+NPDEKRDYRSSHGRDSSSHSHR+RNEDRRR
Sbjct: 361 RRENPDEKRDYRSSHGRDSSSHSHRERNEDRRR 391

[Close]

BLAST of HG10001527 vs. NCBI nr
Match: TYK15418.1 (zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 639.4 bits (1648), Expect = 2.0e-179
Identity = 348/397 (87.66%), Postives = 366/397 (92.19%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEA+LGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
            R +HD+ELRAKGRKNSDDL RHPRE SG LRQEN+ KGWD SK SELK RED  R+DEK
Sbjct: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRN--FDDNGKEEKRLRKHDDDDETKLEDDGYK 300
           R RR+DLDGN  PK GDD Y REEKRS RN  +DDN K+EKR RKHD+D+E KLEDD Y+
Sbjct: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300

Query: 301 KEENRYRRNQDNELPHHSRRDYNTREEDR-LKRHGDGEYQTKLGEDDKRREKDISVRHRS 360
           KEENRYRRNQDNELP HSRR+YNTREEDR  KRHGD EYQ KLGEDDKRRE+DISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360

Query: 361 ESHRRDNPDEKRDYRSSH-GRDSSSHSHRDRNEDRRR 394
           ESHRR+NP+EKRD+RSSH GRDSSSHSH +RNEDRRR
Sbjct: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 397

[Close]

BLAST of HG10001527 vs. NCBI nr
Match: XP_004147921.1 (zinc finger CCCH domain-containing protein 25 [Cucumis sativus] >KGN54364.1 hypothetical protein Csa_018037 [Cucumis sativus])

HSP 1 Score: 639.0 bits (1647), Expect = 2.6e-179
Identity = 345/395 (87.34%), Postives = 364/395 (92.15%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEA+LGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AFVAYEDQRSTNLAVDNLNGAQILGRI+RVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
            RK+HD+EL AKGRK SD+L RHPRE SG LRQEN+ +GWD SK+SELKSRED G KDEK
Sbjct: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHGGKDEK 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKKE 300
           R RR+DLDGN  PKSGDD Y  EEKRS RN DDN K+EKR RKHD+DDE KLEDD Y+KE
Sbjct: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSSRNHDDNRKDEKRSRKHDNDDEMKLEDDRYRKE 300

Query: 301 ENRYRRNQDNELPHHSRRDYNTREEDR-LKRHGDGEYQTKLGEDDKRREKDISVRHRSES 360
           ENRYRRNQDNELP HSRRDY TREEDR  KRHGD EY  KL EDDKRRE+D+SVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDKEYPPKLREDDKRRERDVSVRHRSES 360

Query: 361 HRRDNPDEKRDYRSSH-GRDSSSHSHRDRNEDRRR 394
           +RR+NPDEKRDYRSSH GRDSSSHSHR+RNEDRRR
Sbjct: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 395

[Close]

BLAST of HG10001527 vs. NCBI nr
Match: XP_008449221.1 (PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo] >KAA0045039.1 zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 637.1 bits (1642), Expect = 1.0e-178
Identity = 346/395 (87.59%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEA+LGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
            RK+ ++ELRAKGRKNSD+L RHPRE SG LRQEN+LKG D SK+SELKSRED G KDEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKKE 300
           R RR+DLDGN  PKSGDDHY REEKRSRRN DDN K+EKR RKHDDDDE K EDD Y+KE
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKE 300

Query: 301 ENRYRRNQDNELPHHSRRDYNTREEDR-LKRHGDGEYQTKLGEDDKRREKDISVRHRSES 360
           ENRYRRNQDNELP HSRRDYNTREEDR  KRHGDGEY  KL EDDKRRE+DISVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSES 360

Query: 361 HRRDNPDEKRDYRSSH-GRDSSSHSHRDRNEDRRR 394
           HRR+NPDEKRDY SS  GRDSSSHSHR+RNED  R
Sbjct: 361 HRRENPDEKRDYWSSQGGRDSSSHSHRERNEDCHR 395

[Close]

BLAST of HG10001527 vs. NCBI nr
Match: XP_008449231.1 (PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X2 [Cucumis melo])

HSP 1 Score: 634.8 bits (1636), Expect = 4.9e-178
Identity = 343/390 (87.95%), Postives = 360/390 (92.31%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEA+LGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
            RK+ ++ELRAKGRKNSD+L RHPRE SG LRQEN+LKG D SK+SELKSRED G KDEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKKE 300
           R RR+DLDGN  PKSGDDHY REEKRSRRN DDN K+EKR RKHDDDDE K EDD Y+KE
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKE 300

Query: 301 ENRYRRNQDNELPHHSRRDYNTREEDR-LKRHGDGEYQTKLGEDDKRREKDISVRHRSES 360
           ENRYRRNQDNELP HSRRDYNTREEDR  KRHGDGEY  KL EDDKRRE+DISVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSES 360

Query: 361 HRRDNPDEKRDYRSSH-GRDSSSHSHRDRN 389
           HRR+NPDEKRDY SS  GRDSSSHSHR+RN
Sbjct: 361 HRRENPDEKRDYWSSQGGRDSSSHSHRERN 390

[Close]

BLAST of HG10001527 vs. ExPASy Swiss-Prot
Match: Q10B98 (Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0826400 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.4e-79
Identity = 178/319 (55.80%), Postives = 220/319 (68.97%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VKR Q IN +EA LGI E+ SWHAK+KDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           E+VDVNL+RDKGTGKSKGFAF+AYEDQRST LAVDNLNGA++LGRI+RVDHVSKYKKKEE
Sbjct: 61  EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDK-F 180
           EDEEE QKKREARGVC AFQ+GEC RGA C++SHDEQR ANTGWG+ E++ ++W HD+  
Sbjct: 121 EDEEELQKKREARGVCYAFQKGECNRGASCRYSHDEQRNANTGWGSKEESKARWEHDRHH 180

Query: 181 DDRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDE 240
           +    H +   + G +   D  +   +++GR  Q ++ + +   +DS L+   D G KD 
Sbjct: 181 EPPMSHKKFPSSAGEQRFPDRAKEENKSTGREGQSSRSEAYK-DRDSRLR-HSDRGSKDH 240

Query: 241 KRLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKK 300
            R  RHD    R P+       R   R  +  D+  +  +   KHD+ D+ +   D    
Sbjct: 241 DRY-RHD----RSPERSRGDRQRNNDRYAQGRDEKSERYRSEVKHDEGDQKRSRRDTDSS 300

Query: 301 EENRYRRNQDNELPHHSRR 319
                R N+D+E    SRR
Sbjct: 301 GHYERRGNEDSERYRKSRR 312

[Close]

BLAST of HG10001527 vs. ExPASy Swiss-Prot
Match: Q9SD61 (Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=At3g47120 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 5.3e-74
Identity = 183/342 (53.51%), Postives = 223/342 (65.20%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK +QKIN++E+ LGIS+EASWHAKYK+SAYV+VGGIP+DLTEGDLLAVF+QYG
Sbjct: 1   MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGFAF+AYEDQRST LAVDNLNGA +LGR I+VDH   YKK EE
Sbjct: 61  EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEE  ++ REARGVCRAFQRGECTRG  CKFSHDE+RAANTGWG  ED SSKW HDK  
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNR 180

Query: 181 DRKDHDREL------RAKGRKNSDDLERHPREASGRLRQENKLKGWDGSK-DSELKSRED 240
           + +   R        R    K S D +R     +G   +E++   WD  K +   K    
Sbjct: 181 EGRGVCRAFQRGECTRGDSCKFSHDEKR--AATTGWGHEEDRSSKWDQDKLNGAKKGGTS 240

Query: 241 LGRKDEKRLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNG---------KEEKRLRKH 300
            G + + +    +    R    GD  Y R ++R R + +D G         KE+KR  ++
Sbjct: 241 FGNRGDFKPDVEE-KSYRGRGDGDASYGRPKERERVDREDMGPRSRDAYDMKEQKRSGRY 300

Query: 301 DDDDETKLEDD-GYKKEENRYRRNQDNELPHHSRRDYNTREE 326
           D+    +  D+  Y +E+   R     +    SRRD N REE
Sbjct: 301 DNAYSRRHNDEIDYVREDKGSRAQDWEKRKAESRRDRNDREE 339

[Close]

BLAST of HG10001527 vs. ExPASy Swiss-Prot
Match: Q9Y388 (RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 9.8e-36
Identity = 122/337 (36.20%), Postives = 182/337 (54.01%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++++ SWH++YKDSA++F+GG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKGF F+ YEDQRST LAVDN NG +I GR IRVDHVS Y+  ++
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
            +E ++        V R  Q     +G G +              ++ED      H K  
Sbjct: 121 SEEIDD--------VTRQLQE----KGCGARTPSPSLSE------SSEDEKPTKKHKK-- 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
           D+K+  ++ + K + + +     P  +S R R+  K K   G K    K+ E   +K E 
Sbjct: 181 DKKEKKKKKKEKEKADREVQAEQPSSSSPR-RKTVKEKDDTGPKKHSSKNSE-RAQKSEP 240

Query: 241 RLRRHDLDGNRQPKS------GDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLED 300
           R      +G + PKS      G +   RE K+ +   +      +  R    +++T++ D
Sbjct: 241 R------EGQKLPKSRTAYSGGAEDLERELKKEKPKHEHKSSSRREAR----EEKTRIRD 300

Query: 301 DGYKKEENRYRRNQDNELPHHSRRDYNTREEDRLKRH 332
            G   + +    N  +E      R Y +R   R K H
Sbjct: 301 RGRSSDAHSSWYNGRSE-----GRSYRSRSRSRDKSH 300

[Close]

BLAST of HG10001527 vs. ExPASy Swiss-Prot
Match: B0BN49 (RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-33
Identity = 118/345 (34.20%), Postives = 183/345 (53.04%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++E+ SWH++YKDSA++F+GG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKGF F+ YEDQRST LAVDN NG +I GR IRVDHV+ Y+  +E
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVANYRAPQE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
            ++ ++        V R  Q     +G G K         ++    +ED  +K       
Sbjct: 121 SEDVDD--------VTRELQE----KGCGAK------TPPSSPPEVSEDEDAKVTKKPKK 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
           D+K+         +K   + E+  R     L   ++ K     K+++ +S +    K  +
Sbjct: 181 DKKE---------KKKKKEKEKTERPVQAELPSCSRSK---TVKETDEQSAKKHSSKPSE 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKKE 300
           R ++ +    ++  SG     R   R R   +   + +K   KH+    ++ E +   ++
Sbjct: 241 RAQKSECRERKKSHSGSPD-GRTSCRGRAE-EPEWEAKKEKHKHEHKPSSRREGEEKSRD 300

Query: 301 ENRYRRNQDNELPHH---------SRRDYNTREEDRLKRHGDGEY 337
           ++R R +  +   HH         SR    +R  DR  RH    Y
Sbjct: 301 KDRGRSSGTHSSRHHGHSEGRSHRSRSRSRSRSPDRSHRHKKHRY 313

[Close]

BLAST of HG10001527 vs. ExPASy Swiss-Prot
Match: Q8R0F5 (RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-33
Identity = 131/383 (34.20%), Postives = 197/383 (51.44%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++E+ SWH++YK SA++FVGG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKGF F+ YEDQRST LAVDN NG +I GR IRVDHVS Y+  +E
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
            ++ ++        V R  Q     +G G K          T   +  + S         
Sbjct: 121 SEDVDD--------VTRELQE----KGCGVK----------TPPSSPPEVS--------- 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPRE-ASGRLRQENKLKGWDGSKDSELKSREDLGRKDE 240
             +D D +L  K +K+  + ++  +E   G+ + E        S+ + +K      +KDE
Sbjct: 181 --EDEDAKLTKKHKKDKKEKKKRKKEKTEGQAQAEQP----SCSRSATVKE-----KKDE 240

Query: 241 KRLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKK 300
           +  R+H    + + +  +   +RE K+S     D G+     R  D + + + E   + +
Sbjct: 241 RASRKHSSKTSERAQKSE---HRESKKSHSGSPD-GRSSYHARAEDPECKARKEKPKH-E 300

Query: 301 EENRYRRNQDNELPHHSRRDYNTREEDRLKRHGDGEYQTKLGEDDKRREKDISVRHRSES 360
            ++  RR  + +     R   +     R + H DG          + R  D S RH+   
Sbjct: 301 HKSASRREAEEKSRERERGRSSGTHSGRHRGHSDGRSHR---SRSRSRSPDKSHRHKKYR 326

Query: 361 HRRDNPDEKRDYRSSHGRDSSSH 383
           H R+     RD  S HG D   H
Sbjct: 361 HSRE-----RD--SYHGSDRRHH 326

[Close]

BLAST of HG10001527 vs. ExPASy TrEMBL
Match: A0A5D3CVY9 (Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00620 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 9.7e-180
Identity = 348/397 (87.66%), Postives = 366/397 (92.19%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEA+LGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
            R +HD+ELRAKGRKNSDDL RHPRE SG LRQEN+ KGWD SK SELK RED  R+DEK
Sbjct: 181 SRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKPREDHWRRDEK 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRN--FDDNGKEEKRLRKHDDDDETKLEDDGYK 300
           R RR+DLDGN  PK GDD Y REEKRS RN  +DDN K+EKR RKHD+D+E KLEDD Y+
Sbjct: 241 RSRRYDLDGNPDPKLGDDRYKREEKRSTRNHEYDDNRKDEKRSRKHDNDEEMKLEDDRYR 300

Query: 301 KEENRYRRNQDNELPHHSRRDYNTREEDR-LKRHGDGEYQTKLGEDDKRREKDISVRHRS 360
           KEENRYRRNQDNELP HSRR+YNTREEDR  KRHGD EYQ KLGEDDKRRE+DISVRHRS
Sbjct: 301 KEENRYRRNQDNELPQHSRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRS 360

Query: 361 ESHRRDNPDEKRDYRSSH-GRDSSSHSHRDRNEDRRR 394
           ESHRR+NP+EKRD+RSSH GRDSSSHSH +RNEDRRR
Sbjct: 361 ESHRRENPNEKRDFRSSHGGRDSSSHSHTERNEDRRR 397

[Close]

BLAST of HG10001527 vs. ExPASy TrEMBL
Match: A0A0A0KZW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.3e-179
Identity = 345/395 (87.34%), Postives = 364/395 (92.15%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEA+LGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AFVAYEDQRSTNLAVDNLNGAQILGRI+RVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWGAAEDASSKWGHDKFD
Sbjct: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
            RK+HD+EL AKGRK SD+L RHPRE SG LRQEN+ +GWD SK+SELKSRED G KDEK
Sbjct: 181 SRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKSREDHGGKDEK 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKKE 300
           R RR+DLDGN  PKSGDD Y  EEKRS RN DDN K+EKR RKHD+DDE KLEDD Y+KE
Sbjct: 241 RSRRYDLDGNSDPKSGDDQYKGEEKRSSRNHDDNRKDEKRSRKHDNDDEMKLEDDRYRKE 300

Query: 301 ENRYRRNQDNELPHHSRRDYNTREEDR-LKRHGDGEYQTKLGEDDKRREKDISVRHRSES 360
           ENRYRRNQDNELP HSRRDY TREEDR  KRHGD EY  KL EDDKRRE+D+SVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDKEYPPKLREDDKRRERDVSVRHRSES 360

Query: 361 HRRDNPDEKRDYRSSH-GRDSSSHSHRDRNEDRRR 394
           +RR+NPDEKRDYRSSH GRDSSSHSHR+RNEDRRR
Sbjct: 361 YRRENPDEKRDYRSSHGGRDSSSHSHRERNEDRRR 395

[Close]

BLAST of HG10001527 vs. ExPASy TrEMBL
Match: A0A5A7TUW9 (Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00260 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 4.8e-179
Identity = 346/395 (87.59%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEA+LGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
            RK+ ++ELRAKGRKNSD+L RHPRE SG LRQEN+LKG D SK+SELKSRED G KDEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKKE 300
           R RR+DLDGN  PKSGDDHY REEKRSRRN DDN K+EKR RKHDDDDE K EDD Y+KE
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKE 300

Query: 301 ENRYRRNQDNELPHHSRRDYNTREEDR-LKRHGDGEYQTKLGEDDKRREKDISVRHRSES 360
           ENRYRRNQDNELP HSRRDYNTREEDR  KRHGDGEY  KL EDDKRRE+DISVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSES 360

Query: 361 HRRDNPDEKRDYRSSH-GRDSSSHSHRDRNEDRRR 394
           HRR+NPDEKRDY SS  GRDSSSHSHR+RNED  R
Sbjct: 361 HRRENPDEKRDYWSSQGGRDSSSHSHRERNEDCHR 395

[Close]

BLAST of HG10001527 vs. ExPASy TrEMBL
Match: A0A1S3BLJ3 (zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491164 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 4.8e-179
Identity = 346/395 (87.59%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEA+LGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
            RK+ ++ELRAKGRKNSD+L RHPRE SG LRQEN+LKG D SK+SELKSRED G KDEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKKE 300
           R RR+DLDGN  PKSGDDHY REEKRSRRN DDN K+EKR RKHDDDDE K EDD Y+KE
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKE 300

Query: 301 ENRYRRNQDNELPHHSRRDYNTREEDR-LKRHGDGEYQTKLGEDDKRREKDISVRHRSES 360
           ENRYRRNQDNELP HSRRDYNTREEDR  KRHGDGEY  KL EDDKRRE+DISVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSES 360

Query: 361 HRRDNPDEKRDYRSSH-GRDSSSHSHRDRNEDRRR 394
           HRR+NPDEKRDY SS  GRDSSSHSHR+RNED  R
Sbjct: 361 HRRENPDEKRDYWSSQGGRDSSSHSHRERNEDCHR 395

[Close]

BLAST of HG10001527 vs. ExPASy TrEMBL
Match: A0A1S3BLK5 (zinc finger CCCH domain-containing protein 25-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491164 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.4e-178
Identity = 343/390 (87.95%), Postives = 360/390 (92.31%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEA+LGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEEE+QKKREARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG AEDASSKWGHDKFD
Sbjct: 121 EDEEEQQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGVAEDASSKWGHDKFD 180

Query: 181 DRKDHDRELRAKGRKNSDDLERHPREASGRLRQENKLKGWDGSKDSELKSREDLGRKDEK 240
            RK+ ++ELRAKGRKNSD+L RHPRE SG LRQEN+LKG D SK+SELKSRED G KDEK
Sbjct: 181 GRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKSREDHGEKDEK 240

Query: 241 RLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNGKEEKRLRKHDDDDETKLEDDGYKKE 300
           R RR+DLDGN  PKSGDDHY REEKRSRRN DDN K+EKR RKHDDDDE K EDD Y+KE
Sbjct: 241 RSRRYDLDGNPDPKSGDDHYKREEKRSRRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKE 300

Query: 301 ENRYRRNQDNELPHHSRRDYNTREEDR-LKRHGDGEYQTKLGEDDKRREKDISVRHRSES 360
           ENRYRRNQDNELP HSRRDYNTREEDR  KRHGDGEY  KL EDDKRRE+DISVRHRSES
Sbjct: 301 ENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGDGEYPPKLREDDKRRERDISVRHRSES 360

Query: 361 HRRDNPDEKRDYRSSH-GRDSSSHSHRDRN 389
           HRR+NPDEKRDY SS  GRDSSSHSHR+RN
Sbjct: 361 HRRENPDEKRDYWSSQGGRDSSSHSHRERN 390

[Close]

BLAST of HG10001527 vs. TAIR 10
Match: AT3G47120.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 279.6 bits (714), Expect = 3.8e-75
Identity = 183/342 (53.51%), Postives = 223/342 (65.20%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEASLGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK +QKIN++E+ LGIS+EASWHAKYK+SAYV+VGGIP+DLTEGDLLAVF+QYG
Sbjct: 1   MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGFAF+AYEDQRST LAVDNLNGA +LGR I+VDH   YKK EE
Sbjct: 61  EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120

Query: 121 EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGAAEDASSKWGHDKFD 180
           EDEE  ++ REARGVCRAFQRGECTRG  CKFSHDE+RAANTGWG  ED SSKW HDK  
Sbjct: 121 EDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNR 180

Query: 181 DRKDHDREL------RAKGRKNSDDLERHPREASGRLRQENKLKGWDGSK-DSELKSRED 240
           + +   R        R    K S D +R     +G   +E++   WD  K +   K    
Sbjct: 181 EGRGVCRAFQRGECTRGDSCKFSHDEKR--AATTGWGHEEDRSSKWDQDKLNGAKKGGTS 240

Query: 241 LGRKDEKRLRRHDLDGNRQPKSGDDHYNREEKRSRRNFDDNG---------KEEKRLRKH 300
            G + + +    +    R    GD  Y R ++R R + +D G         KE+KR  ++
Sbjct: 241 FGNRGDFKPDVEE-KSYRGRGDGDASYGRPKERERVDREDMGPRSRDAYDMKEQKRSGRY 300

Query: 301 DDDDETKLEDD-GYKKEENRYRRNQDNELPHHSRRDYNTREE 326
           D+    +  D+  Y +E+   R     +    SRRD N REE
Sbjct: 301 DNAYSRRHNDEIDYVREDKGSRAQDWEKRKAESRRDRNDREE 339

[Close]

BLAST of HG10001527 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 72.8 bits (177), Expect = 7.0e-13
Identity = 34/105 (32.38%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 11  QKINSQ-EASLGISEEASWHA-KYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLI 70
           Q  N Q  A + +S  + + A +   S+ +F+GG+ Y + E  L   F +YGE+VD  +I
Sbjct: 13  QTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVI 72

Query: 71  RDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVS 114
            D+ TG+S+GF FV +    + + A+  L+G  + GR+++V++ +
Sbjct: 73  LDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 117

[Close]

BLAST of HG10001527 vs. TAIR 10
Match: AT4G39260.1 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-12
Identity = 26/72 (36.11%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 39  FVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLN 98
           FVGG+ +   + DL   F+Q+G+++D  +I D+ +G+S+GF FV ++D+++   A++ +N
Sbjct: 9   FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68

Query: 99  GAQILGRIIRVD 111
           G ++ GR+I V+
Sbjct: 69  GKELDGRVITVN 80

[Close]

BLAST of HG10001527 vs. TAIR 10
Match: AT4G39260.2 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-12
Identity = 26/72 (36.11%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 39  FVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLN 98
           FVGG+ +   + DL   F+Q+G+++D  +I D+ +G+S+GF FV ++D+++   A++ +N
Sbjct: 9   FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68

Query: 99  GAQILGRIIRVD 111
           G ++ GR+I V+
Sbjct: 69  GKELDGRVITVN 80

[Close]

BLAST of HG10001527 vs. TAIR 10
Match: AT4G39260.3 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-12
Identity = 26/72 (36.11%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 39  FVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGFAFVAYEDQRSTNLAVDNLN 98
           FVGG+ +   + DL   F+Q+G+++D  +I D+ +G+S+GF FV ++D+++   A++ +N
Sbjct: 9   FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68

Query: 99  GAQILGRIIRVD 111
           G ++ GR+I V+
Sbjct: 69  GKELDGRVITVN 80

The following BLAST results are available for this feature:

BLAST of HG10001527 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902704.1	3.5e-184	90.33	zinc finger CCCH domain-containing protein 25-like [Benincasa hispida]	[more]
TYK15418.1	2.0e-179	87.66	zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var....	[more]
XP_004147921.1	2.6e-179	87.34	zinc finger CCCH domain-containing protein 25 [Cucumis sativus] >KGN54364.1 hypo...	[more]
XP_008449221.1	1.0e-178	87.59	PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumi...	[more]
XP_008449231.1	4.9e-178	87.95	PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X2 [Cucumi...	[more]

BLAST of HG10001527 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10B98	1.4e-79	55.80	Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SD61	5.3e-74	53.51	Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9Y388	9.8e-36	36.20	RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2	[more]
B0BN49	1.2e-33	34.20	RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=...	[more]
Q8R0F5	2.7e-33	34.20	RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=...	[more]

BLAST of HG10001527 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CVY9	9.7e-180	87.66	Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo va...	[more]
A0A0A0KZW7	1.3e-179	87.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1	[more]
A0A5A7TUW9	4.8e-179	87.59	Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo va...	[more]
A0A1S3BLJ3	4.8e-179	87.59	zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo OX...	[more]
A0A1S3BLK5	2.4e-178	87.95	zinc finger CCCH domain-containing protein 25-like isoform X2 OS=Cucumis melo OX...	[more]

BLAST of HG10001527 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47120.1	3.8e-75	53.51	RNA recognition motif (RRM)-containing protein	[more]
AT5G61030.1	7.0e-13	32.38	glycine-rich RNA-binding protein 3	[more]
AT4G39260.1	4.5e-12	36.11	cold, circadian rhythm, and RNA binding 1	[more]
AT4G39260.2	4.5e-12	36.11	cold, circadian rhythm, and RNA binding 1	[more]
AT4G39260.3	4.5e-12	36.11	cold, circadian rhythm, and RNA binding 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..135
None	No IPR available	GENE3D	4.10.1000.10		coord: 118..198 e-value: 1.4E-7 score: 33.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..393
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..393
None	No IPR available	PANTHER	PTHR45880	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..307
None	No IPR available	PANTHER	PTHR45880:SF1	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..307
None	No IPR available	CDD	cd12411	RRM_ist3_like	coord: 27..113 e-value: 8.78787E-58 score: 181.683
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 132..156 e-value: 0.001 score: 28.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 135..155 e-value: 7.8E-5 score: 22.5
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 130..157 score: 14.802481
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 37..110 e-value: 1.4E-26 score: 104.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 38..107 e-value: 1.7E-21 score: 75.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 36..114 score: 20.098822
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..111 e-value: 4.4E-28 score: 100.0
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 27..115
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 133..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10001527.1	HG10001527.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005686	U2 snRNP
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding