HG10001235 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGTAGGTTTGGAGACGGTCCGCTGCCACAGAATTTTGATGGTCTCGAGCAGAAATTTATTGATGATATCATTAAATTGGCCAAGGAACAAAATGATGCAGAGGATGAGGAAAATGCTAGACATAGAGAGGTATATTTTCATACTTCTATTTCACTAGTTGCATTCTCGTTTTTCATGTCATCTTTACTGATCATACTCATTTTGATGCATATCTTCAGAGAATCATGGCCATCAATGCTCAGTATGAGGAACAATTAGCAGCACTTCGAGCTCGGCATGCTAATCGTCGTGATGAGTTACTACGAAGAGAATCAAGTGCACGACAACATCAGTACCAGAAGGGAATAATGGACCATTACCCGAATGGGGGCATTGGCCCAGGTGATCCTCGTGGCAATAGTGGAGTAACAACCTTAGCTGCTTCTGGACAAGCACATCAAAATTATGAATCTGAACACTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGAAATTCTGCCCGGGATCCTAATTTGGATCCTAGAGGTTCCTATCCTGGGGGCCGAGTTTATGACACTGGCTCACGGTACTACTAA ATGGAAAGTAGGTTTGGAGACGGTCCGCTGCCACAGAATTTTGATGGTCTCGAGCAGAAATTTATTGATGATATCATTAAATTGGCCAAGGAACAAAATGATGCAGAGGATGAGGAAAATGCTAGACATAGAGAGAGAATCATGGCCATCAATGCTCAGTATGAGGAACAATTAGCAGCACTTCGAGCTCGGCATGCTAATCGTCGTGATGAGTTACTACGAAGAGAATCAAGTGCACGACAACATCAGTACCAGAAGGGAATAATGGACCATTACCCGAATGGGGGCATTGGCCCAGGTGATCCTCGTGGCAATAGTGGAGTAACAACCTTAGCTGCTTCTGGACAAGCACATCAAAATTATGAATCTGAACACTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGAAATTCTGCCCGGGATCCTAATTTGGATCCTAGAGGTTCCTATCCTGGGGGCCGAGTTTATGACACTGGCTCACGGTACTACTAA ATGGAAAGTAGGTTTGGAGACGGTCCGCTGCCACAGAATTTTGATGGTCTCGAGCAGAAATTTATTGATGATATCATTAAATTGGCCAAGGAACAAAATGATGCAGAGGATGAGGAAAATGCTAGACATAGAGAGAGAATCATGGCCATCAATGCTCAGTATGAGGAACAATTAGCAGCACTTCGAGCTCGGCATGCTAATCGTCGTGATGAGTTACTACGAAGAGAATCAAGTGCACGACAACATCAGTACCAGAAGGGAATAATGGACCATTACCCGAATGGGGGCATTGGCCCAGGTGATCCTCGTGGCAATAGTGGAGTAACAACCTTAGCTGCTTCTGGACAAGCACATCAAAATTATGAATCTGAACACTTCGATTCCTTCAGAGAACGAGCTCGGTTTCTTGGAAATTCTGCCCGGGATCCTAATTTGGATCCTAGAGGTTCCTATCCTGGGGGCCGAGTTTATGACACTGGCTCACGGTACTACTAA MESRFGDGPLPQNFDGLEQKFIDDIIKLAKEQNDAEDEENARHRERIMAINAQYEEQLAALRARHANRRDELLRRESSARQHQYQKGIMDHYPNGGIGPGDPRGNSGVTTLAASGQAHQNYESEHFDSFRERARFLGNSARDPNLDPRGSYPGGRVYDTGSRYY Homology
BLAST of HG10001235 vs. NCBI nr
Match: XP_038901321.1 (uncharacterized protein LOC120088240 [Benincasa hispida]) HSP 1 Score: 322.4 bits (825), Expect = 2.3e-84 Identity = 160/164 (97.56%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of HG10001235 vs. NCBI nr
Match: KAA0061739.1 (hypothetical protein E6C27_scaffold212G001140 [Cucumis melo var. makuwa]) HSP 1 Score: 316.2 bits (809), Expect = 1.6e-82 Identity = 157/164 (95.73%), Postives = 159/164 (96.95%), Query Frame = 0
BLAST of HG10001235 vs. NCBI nr
Match: TYJ96079.1 (hypothetical protein E5676_scaffold182G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 316.2 bits (809), Expect = 1.6e-82 Identity = 157/164 (95.73%), Postives = 159/164 (96.95%), Query Frame = 0
BLAST of HG10001235 vs. NCBI nr
Match: XP_031744069.1 (uncharacterized protein LOC101221687 isoform X2 [Cucumis sativus]) HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81 Identity = 155/163 (95.09%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of HG10001235 vs. NCBI nr
Match: XP_004140174.2 (uncharacterized protein LOC101221687 isoform X1 [Cucumis sativus] >XP_031744068.1 uncharacterized protein LOC101221687 isoform X1 [Cucumis sativus] >KAE8647365.1 hypothetical protein Csa_004279 [Cucumis sativus]) HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81 Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0
BLAST of HG10001235 vs. ExPASy TrEMBL
Match: A0A0A0KI70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426920 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 3.5e-83 Identity = 157/164 (95.73%), Postives = 159/164 (96.95%), Query Frame = 0
BLAST of HG10001235 vs. ExPASy TrEMBL
Match: A0A5A7V7U3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001140 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 7.9e-83 Identity = 157/164 (95.73%), Postives = 159/164 (96.95%), Query Frame = 0
BLAST of HG10001235 vs. ExPASy TrEMBL
Match: A0A5D3BAP0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00380 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 7.9e-83 Identity = 157/164 (95.73%), Postives = 159/164 (96.95%), Query Frame = 0
BLAST of HG10001235 vs. ExPASy TrEMBL
Match: A0A1S3BME9 (uncharacterized protein LOC103491440 OS=Cucumis melo OX=3656 GN=LOC103491440 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 3.3e-81 Identity = 155/162 (95.68%), Postives = 157/162 (96.91%), Query Frame = 0
BLAST of HG10001235 vs. ExPASy TrEMBL
Match: A0A6J1DFR7 (uncharacterized protein LOC111020662 OS=Momordica charantia OX=3673 GN=LOC111020662 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 1.6e-80 Identity = 152/164 (92.68%), Postives = 159/164 (96.95%), Query Frame = 0
BLAST of HG10001235 vs. TAIR 10
Match: AT5G22040.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-34 Identity = 83/164 (50.61%), Postives = 111/164 (67.68%), Query Frame = 0
BLAST of HG10001235 vs. TAIR 10
Match: AT5G22040.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-34 Identity = 83/164 (50.61%), Postives = 111/164 (67.68%), Query Frame = 0
BLAST of HG10001235 vs. TAIR 10
Match: AT5G22040.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. ) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-34 Identity = 83/164 (50.61%), Postives = 111/164 (67.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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