HG10000820 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCCATTAGTGGAAATAGCTTCAATTTCTTGCCTCCTGGTCTCAGATTCTGCCCAACAGATGAAGACCTTGTTCTTCATTTTCTCTATCATAAGGCTTCTCTCTCTTCTACACACAATTTTTCCAATTCCATCATTCCTCAGCTTCAACTTCATCTCTATAACCCTTGGCAATTCCATGGTATAATTTAATATCTCTCTCTCCTTTTTCTTCTTCCTCTCTCTATATATATACACCATGTACTAGAGCCCGCACAAGAGCTCGTGTAAAGCTTTTGAGTTGTTTAGTGAAAAATCAGAGCATGAGATCTTGCTCATAGTGTCTTTTCCTCTATCGTTAGATATTAAAGTTGAGTTCAAAAGTAAAAAAAAAAAACTTGGCAAAGTGAGTTTGGCTGAAAGGTATTGGTATGCGCTTCTTACCTAGAGGTCGGAGATTCAATCTCTTACCACACACTTATTATACAAAAAACAAGAGTTTAAAAGTAGGAGAATTTTTAAAAATAGAAAAATTAGGAAAACTATTTATACAAAATAGCAAAATGTTTAGATAGTTATGATAGACACTGATAGAAGTCTATTAGTATCTATTAGTGTTTTTTTGTTATTTTTTGTAATTAGGTTGACATTTTTTTTATATGTGAAAATTTCTCTTAAAAGTATTAAAATAATTGAATTCTTAGGGTAAATTATCTTTTTGGTCTTTAGGTTTTGAGTTTAGTTCTCATTTCATCCTTAGGTTTAAAAATGTTACGATTTTACTCTTGAAGTTTGAACTTTGTTTCAATTTGGTTCTTAAGTTTCAAGATAATTTACACTTTTTAACCCTAGTTTTTCACCAAATACTCACTTTCAATATTTAGTATGAAAGTCTATTAATTAATGTAAAAGAATAAAGAGAATTATAATTGATTAAGTTTCATTATTTTTTCCATATCAATATTAAAATTTCACTTCATAATTGTTTAAATTAATGAATAGACATTGACGCGAAAGTTGGGAGTGAGAGTATATATTGAGTGAAAAAATCAATGTTATACAATGTATAAATCTTGAAATCTATTGACCAAATTGAAACAAAGTTCAAAATTTAACGACATAAAAGTATAACCTTTTGAAACTTAGAGACTAAATAAATTGAAATCAAATTCAAAACTTAAAAGACTAGATGTGTAACATTTTAAAACTTAGTAACCAAAAATAGAAATTAAACCGAAAATCTAGAGACCAAAGGGCTATTTTTGGTTAAATTTACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACAGGGAAAGCACTTTCAAATGGGGGTATTCACTACTTTTTCAGCAAAGTGGGAGAAAGTAGAGCAACAAAGAGTGGATATTGGAAAGATGTTTTAATGGATGAACCAATCTTGTGTAGTGCCAATGGGAATGAAGTGGGCATAAAAAAGTATCATATTTTCTTTGTTGGTGAAGAAGATCACTCACCAATACCCATTCAAACAAGTTGGGTCATGCAAGAGTATCACATTTATAGCTACCTTTTGAACACCCATATTCCTCAATCTCAAAACAACAACAACAATCTATCACAAACTAAATCAGTAAGTCAAAAACTACTTAATTAAAATGTTTGTTAATTTCCTTTTTTATTATTTTTGTTTCTTGTTTCTCGTTTTCTCTAAGTTTATAACTTTACAATTCATAATATAATTTCGAACACCACGTGATTATAGACCAAATAGAATCATGTAGTTAAACCTAAAACTCAAGATAGAAGTATAATATTTTGAAACTTATAATAAACCACAAGAAAATCATTATCAAAACTCAAAGGAAAGAAAAAAAAAGTATTTTACTTTTTTTTTAAGGGTTCGTTTTCAAATATAGAAAAACGAGTCAAACTATTTACAAATATAGAAAAAAATTCACTATCTATTAACGATAGACCACGATAGACTTCTATCTACGATAGTGAAATTTTTCTATGTTCGTAAATTATTTGATATTTTTTCTATTTATAATAAATTTCCTTTTTAACATTTTTTTTCTATTTAATTTCTTTACTTTTAAAAAAATGAGGAATATGTCTAGTGACCAGAGAGTGGTGACCCTTTCTTACTTCTTGTTTTCCAAAGTAAAAGTACAAAGTTAAAAATGTACGTAATGTTTTAAAATAAATTAAATATCAAAATATAAAATTATATAAAGTTTTATTAGTGTTTGAAAGTTTTTGAAATTGTAAATTAATAATTAAAGCCTATTCTAATAAGGAAAATTATTATAAATAGAAAAAATATCAAACTATTCATAAATATAGAAAAATTGTATTGTCTATCAACGATAGAAATTTATCACTTATCGCTCAATCGTGGTCTAACTGATAAATAGTGAATTTTTTTTTTGTATTTATAAATAGTTTGACTCATTTTTTTTATATTTGAAAACAATCATTCTAATAATATGTAAGTTAAGCTACAAATTTAATTAGTCTCTAAACTTTCAAATTTAGTCTAGTCTCTATAAACATTAATTAGAATATGTGTAATAAAGGTTCCAACTTTATAATTTATAAAAAGGAAAAGGAAAAATTAAAAAAATGTCAAACTATTTACAGAAAATAGCAAAAAAAAAAAAAAAAAAAAAATACTGATAGACATTGATAGACTTCTATCAGCGTCTATCACAATTATCTAAAAATTTTGCTATTTTATATAAATAATTTTCTTTATTATTTTTTTTAAATTGCCCAAATAAAAATGAGAAAAAGAAAATTTTAGTAGGGCATGTATTTCCTAATCAGAGCATAACCAAATTATTAAATAGTGATTAACAATGTTAGCTTTATTTCCATTAAAAGTTAAGTTTTTTAAGAGTAAATTATTTTGTGATTATTGTTGTGATTTGAACAGGAGTTTGGATTATGGGTTCTGTGTCGAGTTTTTGAAGCAAAAGACAATAATGGAATTAGAAGTATGTTTAGTACTTATGAGGAAGATGATGATAATGAAAGTGAACTTTCATATTTGGATGAGATGTATTTGACATTAGATGATATTTGA ATGGAAGCCATTAGTGGAAATAGCTTCAATTTCTTGCCTCCTGGTCTCAGATTCTGCCCAACAGATGAAGACCTTGTTCTTCATTTTCTCTATCATAAGGCTTCTCTCTCTTCTACACACAATTTTTCCAATTCCATCATTCCTCAGCTTCAACTTCATCTCTATAACCCTTGGCAATTCCATGGGAAAGCACTTTCAAATGGGGGTATTCACTACTTTTTCAGCAAAGTGGGAGAAAGTAGAGCAACAAAGAGTGGATATTGGAAAGATGTTTTAATGGATGAACCAATCTTGTGTAGTGCCAATGGGAATGAAGTGGGCATAAAAAAGTATCATATTTTCTTTGTTGGTGAAGAAGATCACTCACCAATACCCATTCAAACAAGTTGGGTCATGCAAGAGTATCACATTTATAGCTACCTTTTGAACACCCATATTCCTCAATCTCAAAACAACAACAACAATCTATCACAAACTAAATCAGAGTTTGGATTATGGGTTCTGTGTCGAGTTTTTGAAGCAAAAGACAATAATGGAATTAGAAGTATGTTTAGTACTTATGAGGAAGATGATGATAATGAAAGTGAACTTTCATATTTGGATGAGATGTATTTGACATTAGATGATATTTGA ATGGAAGCCATTAGTGGAAATAGCTTCAATTTCTTGCCTCCTGGTCTCAGATTCTGCCCAACAGATGAAGACCTTGTTCTTCATTTTCTCTATCATAAGGCTTCTCTCTCTTCTACACACAATTTTTCCAATTCCATCATTCCTCAGCTTCAACTTCATCTCTATAACCCTTGGCAATTCCATGGGAAAGCACTTTCAAATGGGGGTATTCACTACTTTTTCAGCAAAGTGGGAGAAAGTAGAGCAACAAAGAGTGGATATTGGAAAGATGTTTTAATGGATGAACCAATCTTGTGTAGTGCCAATGGGAATGAAGTGGGCATAAAAAAGTATCATATTTTCTTTGTTGGTGAAGAAGATCACTCACCAATACCCATTCAAACAAGTTGGGTCATGCAAGAGTATCACATTTATAGCTACCTTTTGAACACCCATATTCCTCAATCTCAAAACAACAACAACAATCTATCACAAACTAAATCAGAGTTTGGATTATGGGTTCTGTGTCGAGTTTTTGAAGCAAAAGACAATAATGGAATTAGAAGTATGTTTAGTACTTATGAGGAAGATGATGATAATGAAAGTGAACTTTCATATTTGGATGAGATGTATTTGACATTAGATGATATTTGA MEAISGNSFNFLPPGLRFCPTDEDLVLHFLYHKASLSSTHNFSNSIIPQLQLHLYNPWQFHGKALSNGGIHYFFSKVGESRATKSGYWKDVLMDEPILCSANGNEVGIKKYHIFFVGEEDHSPIPIQTSWVMQEYHIYSYLLNTHIPQSQNNNNNLSQTKSEFGLWVLCRVFEAKDNNGIRSMFSTYEEDDDNESELSYLDEMYLTLDDI Homology
BLAST of HG10000820 vs. NCBI nr
Match: XP_038900898.1 (NAC domain-containing protein 104-like [Benincasa hispida]) HSP 1 Score: 365.2 bits (936), Expect = 3.9e-97 Identity = 186/211 (88.15%), Postives = 192/211 (91.00%), Query Frame = 0
BLAST of HG10000820 vs. NCBI nr
Match: XP_004147348.1 (NAC domain-containing protein 104 isoform X1 [Cucumis sativus] >KGN62204.1 hypothetical protein Csa_016924 [Cucumis sativus]) HSP 1 Score: 347.4 bits (890), Expect = 8.4e-92 Identity = 175/216 (81.02%), Postives = 187/216 (86.57%), Query Frame = 0
BLAST of HG10000820 vs. NCBI nr
Match: XP_023007250.1 (NAC domain-containing protein 104-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 342.8 bits (878), Expect = 2.1e-90 Identity = 166/210 (79.05%), Postives = 186/210 (88.57%), Query Frame = 0
BLAST of HG10000820 vs. NCBI nr
Match: KAG6605330.1 (NAC domain-containing protein 104, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035288.1 NAC domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 342.4 bits (877), Expect = 2.7e-90 Identity = 166/210 (79.05%), Postives = 186/210 (88.57%), Query Frame = 0
BLAST of HG10000820 vs. NCBI nr
Match: XP_008460884.1 (PREDICTED: NAC domain-containing protein 104-like isoform X1 [Cucumis melo]) HSP 1 Score: 339.3 bits (869), Expect = 2.3e-89 Identity = 177/219 (80.82%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of HG10000820 vs. ExPASy Swiss-Prot
Match: Q8GWK6 (NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 4.3e-38 Identity = 83/199 (41.71%), Postives = 120/199 (60.30%), Query Frame = 0
BLAST of HG10000820 vs. ExPASy Swiss-Prot
Match: Q9LD44 (NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 9.5e-22 Identity = 63/187 (33.69%), Postives = 94/187 (50.27%), Query Frame = 0
BLAST of HG10000820 vs. ExPASy Swiss-Prot
Match: Q8GY42 (NAC transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=NAC025 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 8.9e-20 Identity = 60/170 (35.29%), Postives = 89/170 (52.35%), Query Frame = 0
BLAST of HG10000820 vs. ExPASy Swiss-Prot
Match: A0A3Q7HH64 (NAC domain-containing protein JA2L OS=Solanum lycopersicum OX=4081 GN=JA2L PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.0e-19 Identity = 67/211 (31.75%), Postives = 107/211 (50.71%), Query Frame = 0
BLAST of HG10000820 vs. ExPASy Swiss-Prot
Match: Q9ZNU2 (NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.0e-19 Identity = 62/193 (32.12%), Postives = 95/193 (49.22%), Query Frame = 0
BLAST of HG10000820 vs. ExPASy TrEMBL
Match: A0A0A0LME0 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G334550 PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 4.1e-92 Identity = 175/216 (81.02%), Postives = 187/216 (86.57%), Query Frame = 0
BLAST of HG10000820 vs. ExPASy TrEMBL
Match: A0A6J1L2G4 (NAC domain-containing protein 104-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499792 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90 Identity = 166/210 (79.05%), Postives = 186/210 (88.57%), Query Frame = 0
BLAST of HG10000820 vs. ExPASy TrEMBL
Match: A0A1S3CDX4 (NAC domain-containing protein 104-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499626 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89 Identity = 177/219 (80.82%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of HG10000820 vs. ExPASy TrEMBL
Match: A0A6J1G7C6 (NAC domain-containing protein 104-like OS=Cucurbita moschata OX=3662 GN=LOC111451523 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 3.2e-89 Identity = 164/210 (78.10%), Postives = 185/210 (88.10%), Query Frame = 0
BLAST of HG10000820 vs. ExPASy TrEMBL
Match: A0A6J1DVM4 (NAC domain-containing protein 104-like OS=Momordica charantia OX=3673 GN=LOC111023517 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 6.7e-79 Identity = 156/214 (72.90%), Postives = 177/214 (82.71%), Query Frame = 0
BLAST of HG10000820 vs. TAIR 10
Match: AT5G64530.1 (xylem NAC domain 1 ) HSP 1 Score: 159.5 bits (402), Expect = 3.0e-39 Identity = 83/199 (41.71%), Postives = 120/199 (60.30%), Query Frame = 0
BLAST of HG10000820 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 ) HSP 1 Score: 105.1 bits (261), Expect = 6.8e-23 Identity = 63/187 (33.69%), Postives = 94/187 (50.27%), Query Frame = 0
BLAST of HG10000820 vs. TAIR 10
Match: AT3G15500.1 (NAC domain containing protein 3 ) HSP 1 Score: 99.0 bits (245), Expect = 4.9e-21 Identity = 67/210 (31.90%), Postives = 100/210 (47.62%), Query Frame = 0
BLAST of HG10000820 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 ) HSP 1 Score: 98.6 bits (244), Expect = 6.3e-21 Identity = 60/170 (35.29%), Postives = 89/170 (52.35%), Query Frame = 0
BLAST of HG10000820 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20 Identity = 62/193 (32.12%), Postives = 95/193 (49.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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