HG10000144 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000144
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	basic leucine zipper 34-like
Location	Chr09: 1461799 .. 1461975 (+)
RNA-Seq Expression	HG10000144
Synteny	HG10000144

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTCAATTGATGCAGCTCATGAAGAAGCATTGAAGAGGGAAATAGAGAGATTAGGCCAATTGTATCATCGGCAGAAGAGTCAGAGAATGGAATGTAACGAGTCATCCCAAGTAGCAACCAAAGAACAACCCACATCTTCTGGAGATCAAAAACATAAGCTTCTTTATGTTTGA

mRNA sequence

ATGTATTCAATTGATGCAGCTCATGAAGAAGCATTGAAGAGGGAAATAGAGAGATTAGGCCAATTGTATCATCGGCAGAAGAGTCAGAGAATGGAATGTAACGAGTCATCCCAAGTAGCAACCAAAGAACAACCCACATCTTCTGGAGATCAAAAACATAAGCTTCTTTATGTTTGA

Coding sequence (CDS)

ATGTATTCAATTGATGCAGCTCATGAAGAAGCATTGAAGAGGGAAATAGAGAGATTAGGCCAATTGTATCATCGGCAGAAGAGTCAGAGAATGGAATGTAACGAGTCATCCCAAGTAGCAACCAAAGAACAACCCACATCTTCTGGAGATCAAAAACATAAGCTTCTTTATGTTTGA

Protein sequence

MYSIDAAHEEALKREIERLGQLYHRQKSQRMECNESSQVATKEQPTSSGDQKHKLLYV

Homology

[Close]

BLAST of HG10000144 vs. NCBI nr
Match: XP_038902209.1 (basic leucine zipper 61-like [Benincasa hispida])

HSP 1 Score: 95.9 bits (237), Expect = 1.2e-16
Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0


Query: 7   AHEEALKREIERLGQLYHRQKSQRMECNESSQVATKEQPTSSGDQKHKLLYV 59
           AHE+ALKREIERLGQLYHRQKSQRMECNESS + TKEQPTSSGDQKHKLLY+
Sbjct: 227 AHEDALKREIERLGQLYHRQKSQRMECNESSPIVTKEQPTSSGDQKHKLLYL 278

[Close]

BLAST of HG10000144 vs. NCBI nr
Match: XP_008455935.1 (PREDICTED: basic leucine zipper 34-like [Cucumis melo])

HSP 1 Score: 83.6 bits (205), Expect = 6.3e-13
Identity = 47/53 (88.68%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 7   AHEEALKREIERLGQLYHR-QKSQRMECNESSQVATKEQPTSSGDQKHKLLYV 59
           AHEEALKREIERLGQLYHR QKSQRMECNESS     EQPTSSGDQKHKLLYV
Sbjct: 226 AHEEALKREIERLGQLYHRQQKSQRMECNESSPT---EQPTSSGDQKHKLLYV 275

[Close]

BLAST of HG10000144 vs. NCBI nr
Match: XP_011649984.1 (basic leucine zipper 34 [Cucumis sativus] >KGN63216.1 hypothetical protein Csa_022190 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 9.0e-12
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 7   AHEEALKREIERLGQLYHR-QKSQRMECNESSQVATKEQPTSSGDQKHKLLYV 59
           AHEEALKREIERLGQLYHR QKS+RMECNESS     E PTSSGDQKHKLLYV
Sbjct: 226 AHEEALKREIERLGQLYHRQQKSKRMECNESSPT---EPPTSSGDQKHKLLYV 275

[Close]

BLAST of HG10000144 vs. NCBI nr
Match: XP_022986372.1 (basic leucine zipper 61-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 64.7 bits (156), Expect = 3.0e-07
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 0


Query: 6   AAHEEALKREIERLGQLYHR-QKSQRMECNESSQVATKEQPTSSGDQKHKLLYV 59
           AAHEEALKREIERLGQLYHR QK++RM+ N  S  AT E P S GD+  KLLYV
Sbjct: 167 AAHEEALKREIERLGQLYHRQQKNRRMDSNGPSPAATNE-PISPGDKNQKLLYV 219

[Close]

BLAST of HG10000144 vs. NCBI nr
Match: XP_023513062.1 (basic leucine zipper 6-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 63.2 bits (152), Expect = 8.8e-07
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = 0


Query: 6   AAHEEALKREIERLGQLYHR-QKSQRMECNESSQVATKEQPTSSGDQKHKLLYV 59
           AAHEEALKREIERLGQLYHR QK++RM+ N  S VA  E P S GD+  +LLYV
Sbjct: 167 AAHEEALKREIERLGQLYHRQQKNRRMDSNGPSPVAANE-PISPGDKNQRLLYV 219

[Close]

BLAST of HG10000144 vs. ExPASy TrEMBL
Match: A0A1S3C3B3 (basic leucine zipper 34-like OS=Cucumis melo OX=3656 GN=LOC103495998 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.0e-13
Identity = 47/53 (88.68%), Postives = 47/53 (88.68%), Query Frame = 0


Query: 7   AHEEALKREIERLGQLYHR-QKSQRMECNESSQVATKEQPTSSGDQKHKLLYV 59
           AHEEALKREIERLGQLYHR QKSQRMECNESS     EQPTSSGDQKHKLLYV
Sbjct: 226 AHEEALKREIERLGQLYHRQQKSQRMECNESSPT---EQPTSSGDQKHKLLYV 275

[Close]

BLAST of HG10000144 vs. ExPASy TrEMBL
Match: A0A0A0LT56 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G416070 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.4e-12
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 7   AHEEALKREIERLGQLYHR-QKSQRMECNESSQVATKEQPTSSGDQKHKLLYV 59
           AHEEALKREIERLGQLYHR QKS+RMECNESS     E PTSSGDQKHKLLYV
Sbjct: 226 AHEEALKREIERLGQLYHRQQKSKRMECNESSPT---EPPTSSGDQKHKLLYV 275

[Close]

BLAST of HG10000144 vs. ExPASy TrEMBL
Match: A0A6J1J7D1 (basic leucine zipper 61-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484131 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-07
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 0


Query: 6   AAHEEALKREIERLGQLYHR-QKSQRMECNESSQVATKEQPTSSGDQKHKLLYV 59
           AAHEEALKREIERLGQLYHR QK++RM+ N  S  AT E P S GD+  KLLYV
Sbjct: 167 AAHEEALKREIERLGQLYHRQQKNRRMDSNGPSPAATNE-PISPGDKNQKLLYV 219

[Close]

BLAST of HG10000144 vs. ExPASy TrEMBL
Match: A0A6J1JGB8 (basic leucine zipper 61-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484131 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.5e-07
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 7   AHEEALKREIERLGQLYHR-QKSQRMECNESSQVATKEQPTSSGDQKHKLLYV 59
           AHEEALKREIERLGQLYHR QK++RM+ N  S  AT E P S GD+  KLLYV
Sbjct: 165 AHEEALKREIERLGQLYHRQQKNRRMDSNGPSPAATNE-PISPGDKNQKLLYV 216

[Close]

BLAST of HG10000144 vs. ExPASy TrEMBL
Match: A0A6J1FXV1 (basic leucine zipper 6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448747 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-06
Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 6   AAHEEALKREIERLGQLYHR-QKSQRMECNESSQVATKEQPTSSGDQKHKLLYV 59
           AAHEEALKREIERLGQLYHR QK++RM  N  S VA  ++P S GD+   LLYV
Sbjct: 167 AAHEEALKREIERLGQLYHRQQKNRRMNSNGPSPVAA-DEPISPGDKNQTLLYV 219

[Close]

BLAST of HG10000144 vs. TAIR 10
Match: AT3G58120.1 (Basic-leucine zipper (bZIP) transcription factor family protein )

HSP 1 Score: 42.4 bits (98), Expect = 1.5e-04
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0


Query: 7   AHEEALKREIERLGQLYHRQKSQRMECNESSQVATKEQPTSSGDQ 52
           AH+EALKREIERL Q+YH+Q  ++ME N S Q     +P+   +Q
Sbjct: 281 AHQEALKREIERLRQVYHQQSLKKMENNVSDQSPADIKPSVEKEQ 325

The following BLAST results are available for this feature:

BLAST of HG10000144 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902209.1	1.2e-16	90.38	basic leucine zipper 61-like [Benincasa hispida]	[more]
XP_008455935.1	6.3e-13	88.68	PREDICTED: basic leucine zipper 34-like [Cucumis melo]	[more]
XP_011649984.1	9.0e-12	84.91	basic leucine zipper 34 [Cucumis sativus] >KGN63216.1 hypothetical protein Csa_0...	[more]
XP_022986372.1	3.0e-07	70.37	basic leucine zipper 61-like isoform X1 [Cucurbita maxima]	[more]
XP_023513062.1	8.8e-07	68.52	basic leucine zipper 6-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10000144 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10000144 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3B3	3.0e-13	88.68	basic leucine zipper 34-like OS=Cucumis melo OX=3656 GN=LOC103495998 PE=4 SV=1	[more]
A0A0A0LT56	4.4e-12	84.91	BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G416070 PE=4 S...	[more]
A0A6J1J7D1	1.5e-07	70.37	basic leucine zipper 61-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484...	[more]
A0A6J1JGB8	5.5e-07	69.81	basic leucine zipper 61-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484...	[more]
A0A6J1FXV1	2.7e-06	66.67	basic leucine zipper 6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of HG10000144 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58120.1	1.5e-04	51.11	Basic-leucine zipper (bZIP) transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000144.1	HG10000144.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity