Cucsat.G9905 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G9905
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	ctg1673: 1470906 .. 1474427 (+)
RNA-Seq Expression	Cucsat.G9905
Synteny	Cucsat.G9905

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATGGGGAAGAAAGGAAGCAAAGCAAGAGGTAGGGTTGAAAGCGGGGCCGGTCATTATGGCGCCAACAAATAAATTAGGAAGCGACTAAATTATATCCACCTGGGTCCTTATTCACAATTCATAACGAACATTTTACAATTCCCGTTATTAGATTCTTTATGGGAATAACTCCCGTTTTTGACGCTCAATCCGACGAACCCATCCCCGATTTCATAGCATTACCACACGCATCTTCTAATAACGGGAATTGTAAAATGTTCGATTTCATCCAAACCCACTTTCATTCGATTAAATCCCCTCCTTTTTCTTCCTCTTCTCTTCAACTCTCCTCTGGAATCCCTCCGGTCCGCTGCCTTCTCAGCGCGATCACTGGGGATTCTGGTTCTTCTCCCATTTCTACTACTACTACGCCTCTTGAGCTTTGTTTTTTTGCCCACTTTGGTGTTTCATTTTTGTTTGCGGAGCTATGAGCGATCATCTCGTTCTGTATGTGGACCGATTAGCTCGGCCGCCACCCCTTGATTCCATCCCCAACCCACCTGAGGCTGTTCCTCTCTTGCCGGTTGATGGGGATTTGGACAGCGACTCACCTTTGTCTTCTCCAACCTCTGCTTCCAGTGTTGAGGAGAGGGGAGAAGAAAATGAGGGTTCGGATGGAGAAGATGATTCTTTGATTCAGACAGCGGAGTGCCGCATTTGTCAGGATGAGGATGTAATTAGGAAGCTGGAAACTCCTTGTGCCTGTAGTGGCAGCCTTAAGGTATAAGTGATTTTTCAATTTAAGTATTGTAAAACTTTCTACTTTCTTTGTAAATGTTTCGGCTTTACGGGATTACATTAGTGATCATTAAGTAATTTGAAGCATAAATATATAGGGATTATTTAGCATCTTATTTGTTTTTGTAGCTCAAGTTGCAGTCATTGGCCGGCCATTGTGGTTGGCTAATTAAGTCGGTGTTTATGTCAAATTTACAAAAACTAGTTGTATATGCTTAAGTGAATGCCATAAATCTAAGAATGTTCGGTAGGAAAGTTTTATCGTAGGGTCAAATGTCTGTTTATGTTTATCTTGTTTTGTTTGTCTCAAATATATCCAATGAGACATTCGTTGGTTGTGTTGCATTACGATTTAGATGAGATGTTAACAACGATTGCTTTCTCAGTATGCTCATCGGAAGTGTATACAGCTTTGGTGCAATGAGAAAGGGGATATTATTTGTGAGATTTGTCATCAGGTATGTTCACTTTTTTTTATTGTACTTTGTTATTTTAAGTTCGTGGAATCATGTGTGCATTTGACATCAAAGATTCAAAGTTGTTCTAGAAGAGATGTTGTTGGACTTGCACCCCCTTTTGGGATATAGCAACGGTTTTTCTGCTGGTGTAGAGTGTTTGGGTTGAAAGAAATATTAGAATTTTTAGAAATGTCAATTGACCTTGGTTTGATATGCCCTATAATGTTAGATCTAAAACTTCGTTGTGGCTACTACTTCTCAGGCTTTGTGAAATTATTAGCTTGTTTGATTCTTTTGGACCAGAGTCCCTCTCTTTGGATGAACACCCTTTGTTGGGAGGTCGTTTTTGTATTGCCCTTTGTTTTTCCATAAGCTGGGTTCTTGTCAATATATCTATATATGAGTTCGTGAGAGCTCGTCTGACTTCTTAAGTGGACACGTATTATTCCATTCAATATTTTGTGTATGGGCCATGACACTATCTGGGGAAAGCATCTTGAAAGAAAAACATGTTTAACGTAATGGTATTTCCATTGGAAAATGAAGTCAAGAAATGGTATATGACCTTACTTGAACGGGATATGTTCTATAGGTTGTACATCTGGGTCCTTGAGTTCTAGGGAGACAAGAAATGGTACAGGCTGACTATTGAAAGATAAAACAATTTAAATAATGATGAGTGTAGACGCGTGTATATATATATATATATATATATGGAAACAATTCAGCTACATTGAATGCCATATTTTTTAGAGGTTTCAACTTACCTGAATTTATATGCTTGCATATGACGCACAGCCTTACCAACCTGATTATACAGCTCCGCCACCTCCCCCTCGCATTGAAGAAACATCTATTGACATCGGGTACCTTACATGCTTCAAATTTCCTTACTTTAGAAAGTTTTGAGATATTTTATGAAATCTTTTTGTTTATTTGAAAAATTGTGCTGTACTTCTTTTCTCGATATTTTGCATTTGAGATGTTAAGCTAAACATGTCCTATTCTTTGCTTTCTGCAGGGGAGGGTGGACCATCACTGGCACCCCTTTGAATTTACACGATCCTCGCTTTTTGGCTATTGCTGAGGCTGAGCATAATATATTGGAAGCCGAGTATGATGAATATGCTGCTTCAGATGCCAGTGGAGCTGCATTTTGTCGAGCAGCTGCTCTTATTGTAAGTTTGTTGTTCGATAATTGATACCACACGTAAAAAATCTCAGTAGTATAATCAAGAAACTTAGTATTGTCATACACATTTTATAAACTGATGTCACGATTAATTAGTGGGCTAATACCTCACATTTGAAGGCGTTTTCACACTTCTCTTTGAATTACTCTCATACAAAGTTGACATTGCAGTTTCATATTCTCATGGAAAATGTATGAACTAATGACCTGTTTGCTGATGTTCTTTTTATTCAATTGGGATAAAATGACATCATTTGTTTAATTTCAATATGGCAGCTCATGATCCTACTTTTCTTACGTCACGCACTTGAAGTCACAGATCCTGATGGTGACGATTACTTGTCTGCTTTCTTCTCTGTAAGTTAGAGTTCATTGTTTCAATCTGGAATGGACAACAATCTCCAGCAGTTTTCCTTTCTCACAGATCTTTGACATTCCTCATCTTCTGGACATTTTTTTAACCATACCATCCAGATTTTCTTGCTTCGAGCAGCTGGTTTTCTCTTGCCCTGTTACATTATGGCTTGTGCAGTCAACATCTTGCAACGTCGACAACGACGACAGGTGGGCATTACCTCCCACATTATCCTTAACTAATAATTCAAGGATAAATTTTTTTACCTAACGTTTCGTTTTCCTTTTATGTTTTGCCTAATTTGAGGAACGGGAGGCTGCAGCCTTGGGTGCAGCACAAGTTGCTTTTGTGCTACAATCAGGACGGCACAGGGGGCTGCAATTTGCAATAGCACCAGGACCTCAAATGACTCCCCACCAGGAGACTGTTTAACTTACATAGGCACAAAATGTATGACCTCTTCATTTTTTCCCCAATGGTTTTAGCACAAAAACGGAAAATCTAGATCTGCCTTGAAATCTGTCCATATTTGTAATCTGTCTTACATTCATTTTGGAAAGCCCGAGTGTAATTCTTCTCAAGAATGCTATAGCTTTTCATGATCTTCAATCTCCTGCCCCTTGAGTAATGTAGCAACGGAAAACTTAAAACCAAAATTTCAGTAGTTGAATGGTGTACACGAAACAGAGTTTGTATAAATTGTTTAAAGATCTTTGTTTCGAATCTTACATATAAAAGGAAGAACTATGTCTGGTTTGTCTTGTAAATTACCTTGTCAATTTTT

Coding sequence (CDS)

ATGAGCGATCATCTCGTTCTGTATGTGGACCGATTAGCTCGGCCGCCACCCCTTGATTCCATCCCCAACCCACCTGAGGCTGTTCCTCTCTTGCCGGTTGATGGGGATTTGGACAGCGACTCACCTTTGTCTTCTCCAACCTCTGCTTCCAGTGTTGAGGAGAGGGGAGAAGAAAATGAGGGTTCGGATGGAGAAGATGATTCTTTGATTCAGACAGCGGAGTGCCGCATTTGTCAGGATGAGGATGTAATTAGGAAGCTGGAAACTCCTTGTGCCTGTAGTGGCAGCCTTAAGTATGCTCATCGGAAGTGTATACAGCTTTGGTGCAATGAGAAAGGGGATATTATTTGTGAGATTTGTCATCAGCCTTACCAACCTGATTATACAGCTCCGCCACCTCCCCCTCGCATTGAAGAAACATCTATTGACATCGGGGGAGGGTGGACCATCACTGGCACCCCTTTGAATTTACACGATCCTCGCTTTTTGGCTATTGCTGAGGCTGAGCATAATATATTGGAAGCCGAGTATGATGAATATGCTGCTTCAGATGCCAGTGGAGCTGCATTTTGTCGAGCAGCTGCTCTTATTCTCATGATCCTACTTTTCTTACGTCACGCACTTGAAGTCACAGATCCTGATGGTGACGATTACTTGTCTGCTTTCTTCTCTGTAAGTTAG

Protein sequence

MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSPLSSPTSASSVEERGEENEGSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDEYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSVS

Homology

[Close]

BLAST of Cucsat.G9905 vs. ExPASy Swiss-Prot
Match: Q80TE3 (E3 ubiquitin-protein ligase MARCHF4 OS=Mus musculus OX=10090 GN=Marchf4 PE=2 SV=3)

HSP 1 Score: 60.5 bits (145), Expect = 3.8e-08
Identity = 42/111 (37.84%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 22  PNPPEAVPLLPVDGDLDSDSPLSSP-----TSASSVE---ERGEENEGSDGEDDSLIQTA 81
           P PP   P LP  GD D D P + P     +SASS E   E+ E+        DS ++T 
Sbjct: 103 PLPPP--PPLPPSGDDDWDGPATGPPASLLSSASSDEFCKEKTEDCYSLGSSLDSGMRTP 162

Query: 82  ECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEICHQPY 125
            CRIC       +L +PC C GS+K  H+ C+  W +E+G   CE+C+  Y
Sbjct: 163 LCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKY 211

[Close]

BLAST of Cucsat.G9905 vs. ExPASy Swiss-Prot
Match: Q9P2E8 (E3 ubiquitin-protein ligase MARCHF4 OS=Homo sapiens OX=9606 GN=MARCHF4 PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 5.5e-07
Identity = 40/115 (34.78%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 15  PPPLDSIPNPPEAVPLLPVD--GDLDSDSPLSSPTSASS---VEERGEENEGSDGEDDSL 74
           PPP   +P PP   P    D  G   ++ P S  +SASS    +E+ E+        DS 
Sbjct: 101 PPP---VPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLGSSLDSG 160

Query: 75  IQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEICHQPY 125
           ++T  CRIC       +L +PC C GS+K  H+ C+  W +E+G   CE+C+  Y
Sbjct: 161 MRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKY 212

[Close]

BLAST of Cucsat.G9905 vs. ExPASy Swiss-Prot
Match: Q86YJ5 (E3 ubiquitin-protein ligase MARCHF9 OS=Homo sapiens OX=9606 GN=MARCHF9 PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 7.1e-07
Identity = 36/104 (34.62%), Postives = 50/104 (48.08%), Query Frame = 0


Query: 22  PNPPEAVPLLPVDGDLDSDSPLSSPTSASSVEERGEENEGSDGEDDSLIQTAECRICQDE 81
           P PP A P LP  G LD+ S  SS                     DS ++T +CRIC   
Sbjct: 78  PLPPPAPP-LPPPGALDALSLSSSL--------------------DSGLRTPQCRICFQG 137

Query: 82  DVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEICHQPYQ 126
               +L +PC C GS++  H+ C+  W +E+G   CE+C+  YQ
Sbjct: 138 PEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQ 160

[Close]

BLAST of Cucsat.G9905 vs. ExPASy Swiss-Prot
Match: Q3TZ87 (E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.1e-07
Identity = 33/115 (28.70%), Postives = 48/115 (41.74%), Query Frame = 0


Query: 11  RLARPPPLDSIPNPPEAVPLLPVDGDLDSDSPLSSPTSASSVEERGEENEGSDGEDDSLI 70
           R   PPP    P PP A+  L +   LDS                              +
Sbjct: 75  RAGPPPPPAPPPPPPGALDALSLSSSLDSG-----------------------------L 134

Query: 71  QTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEICHQPYQ 126
           +T +CRIC       +L +PC C GS++  H+ C+  W +E+G   CE+C+  YQ
Sbjct: 135 RTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQ 160

[Close]

BLAST of Cucsat.G9905 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.3e-07
Identity = 37/114 (32.46%), Postives = 53/114 (46.49%), Query Frame = 0


Query: 17  PLDSIPNPPEAVPLLPVDGDLDSDSPLSSPTSA-----SSVEERGEENEGSDGEDDSLIQ 76
           P DS+     A   +  +  + S S  SSP  A     S+++       GS   DD   +
Sbjct: 5   PADSLSISGAAASEVVSEPSVSSSSSSSSPNQASPNPFSNMDPAVSTATGSRYVDDDEDE 64

Query: 77  TAECRICQDE-DVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEICHQPY 125
              CRIC++  D    L  PCACSGS+K+ H+ C+  W N      CE+C  P+
Sbjct: 65  EDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPF 118

[Close]

BLAST of Cucsat.G9905 vs. NCBI nr
Match: XP_004135456.1 (uncharacterized protein LOC101205076 [Cucumis sativus] >KGN51915.1 hypothetical protein Csa_008417 [Cucumis sativus])

HSP 1 Score: 595 bits (1533), Expect = 2.00e-214
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSPLSSPTSASSVEERGEENE 60
           MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSPLSSPTSASSVEERGEENE
Sbjct: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSPLSSPTSASSVEERGEENE 60

Query: 61  GSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEIC 120
           GSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEIC
Sbjct: 61  GSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEIC 120

Query: 121 HQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDEY 180
           HQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDEY
Sbjct: 121 HQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDEY 180

Query: 181 AASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYIM 240
           AASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYIM
Sbjct: 181 AASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYIM 240

Query: 241 ACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295
           ACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV
Sbjct: 241 ACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295

[Close]

BLAST of Cucsat.G9905 vs. NCBI nr
Match: XP_008446351.1 (PREDICTED: uncharacterized protein LOC103489118 [Cucumis melo] >KAA0034417.1 zinc finger family protein [Cucumis melo var. makuwa] >TYK17716.1 zinc finger family protein [Cucumis melo var. makuwa])

HSP 1 Score: 563 bits (1450), Expect = 9.33e-202
Identity = 281/296 (94.93%), Postives = 287/296 (96.96%), Query Frame = 0


Query: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSP-LSSPTSASSVEERGEEN 60
           MSDHLVLYVDRL RPPP+DS+PNP EAVPLLPV GDL+SDS  LSS TSAS+VEERGEEN
Sbjct: 1   MSDHLVLYVDRLVRPPPVDSVPNPAEAVPLLPVGGDLESDSVGLSSSTSASNVEERGEEN 60

Query: 61  EGSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI 120
           EG DGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI
Sbjct: 61  EGLDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI 120

Query: 121 CHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDE 180
           CHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPR LAIAEAEHN+LEAEYD+
Sbjct: 121 CHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYDD 180

Query: 181 YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI 240
           YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI
Sbjct: 181 YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI 240

Query: 241 MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295
           MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV
Sbjct: 241 MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 296

[Close]

BLAST of Cucsat.G9905 vs. NCBI nr
Match: XP_038891937.1 (uncharacterized protein LOC120081275 [Benincasa hispida])

HSP 1 Score: 535 bits (1377), Expect = 1.25e-190
Identity = 269/296 (90.88%), Postives = 276/296 (93.24%), Query Frame = 0


Query: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSP-LSSPTSASSVEERGEEN 60
           MSDHLVLYVDR+ RPPP+DS+PNP E VPLL V GDL SDS  LSS TS S+ +ER  EN
Sbjct: 1   MSDHLVLYVDRIIRPPPVDSVPNPTEVVPLLRVGGDLASDSVGLSSSTSTSNFDERAHEN 60

Query: 61  EGSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI 120
           EG DGE DSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI
Sbjct: 61  EGLDGEADSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI 120

Query: 121 CHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDE 180
           CHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPR LAIAEAEHN+LEAEYDE
Sbjct: 121 CHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYDE 180

Query: 181 YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI 240
           YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI
Sbjct: 181 YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI 240

Query: 241 MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295
           MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIA GP MT HQ+TV
Sbjct: 241 MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIASGPPMTSHQDTV 296

[Close]

BLAST of Cucsat.G9905 vs. NCBI nr
Match: XP_023552876.1 (uncharacterized protein LOC111810398 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516 bits (1329), Expect = 2.48e-183
Identity = 261/298 (87.58%), Postives = 273/298 (91.61%), Query Frame = 0


Query: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDS---PLSSPTSASSVEERGE 60
           MSDHLVLYVDRL RP P+DS+PNP E VP LPV GDL+ DS   P S  TS S+V+E+ +
Sbjct: 1   MSDHLVLYVDRLIRPVPVDSVPNPTEIVPFLPVGGDLEGDSLGFPCS--TSTSNVDEKRK 60

Query: 61  ENEGSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC 120
           E+E  DGEDDSLIQTAECRICQD+D+IRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC
Sbjct: 61  ESEDLDGEDDSLIQTAECRICQDDDIIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC 120

Query: 121 EICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEY 180
           EICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPR LAIAEAEHN+LEAEY
Sbjct: 121 EICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEY 180

Query: 181 DEYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPC 240
           DEYAASDASGAAFCRAAA ILMILLFLRHALEVTDPDGDDYLSAFFSIFLLR AGFLLPC
Sbjct: 181 DEYAASDASGAAFCRAAAFILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRVAGFLLPC 240

Query: 241 YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295
           YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQ GRHRGLQFAIA GPQMT  Q+TV
Sbjct: 241 YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQ-GRHRGLQFAIASGPQMTSRQDTV 295

[Close]

BLAST of Cucsat.G9905 vs. NCBI nr
Match: XP_022992994.1 (uncharacterized protein LOC111489151 [Cucurbita maxima])

HSP 1 Score: 513 bits (1322), Expect = 2.89e-182
Identity = 259/298 (86.91%), Postives = 273/298 (91.61%), Query Frame = 0


Query: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDS---PLSSPTSASSVEERGE 60
           MSDHLVLYVDRL RP P++S+PNP E VP LP+ GDL+ DS   P S  TS S+V+E+ +
Sbjct: 1   MSDHLVLYVDRLIRPVPVESVPNPTEVVPFLPIGGDLEGDSLGFPCS--TSTSNVDEKRK 60

Query: 61  ENEGSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC 120
           E+E  DGEDDSLIQTAECRICQD+D+IRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC
Sbjct: 61  ESEDLDGEDDSLIQTAECRICQDDDIIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC 120

Query: 121 EICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEY 180
           EICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPR LAIAEAEHN+LEAEY
Sbjct: 121 EICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEY 180

Query: 181 DEYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPC 240
           DEYAASDASGAAFCRAAA ILMILLFLRHALEVTDPDGDDYLSAFFSIFLLR AGFLLPC
Sbjct: 181 DEYAASDASGAAFCRAAAFILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRVAGFLLPC 240

Query: 241 YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295
           YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQ GRHRGLQFAIA GPQMT  Q+TV
Sbjct: 241 YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQ-GRHRGLQFAIASGPQMTSLQDTV 295

[Close]

BLAST of Cucsat.G9905 vs. ExPASy TrEMBL
Match: A0A0A0KQL3 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605090 PE=4 SV=1)

HSP 1 Score: 595 bits (1533), Expect = 9.68e-215
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSPLSSPTSASSVEERGEENE 60
           MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSPLSSPTSASSVEERGEENE
Sbjct: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSPLSSPTSASSVEERGEENE 60

Query: 61  GSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEIC 120
           GSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEIC
Sbjct: 61  GSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEIC 120

Query: 121 HQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDEY 180
           HQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDEY
Sbjct: 121 HQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDEY 180

Query: 181 AASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYIM 240
           AASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYIM
Sbjct: 181 AASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYIM 240

Query: 241 ACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295
           ACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV
Sbjct: 241 ACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295

[Close]

BLAST of Cucsat.G9905 vs. ExPASy TrEMBL
Match: A0A5A7SYR0 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00440 PE=4 SV=1)

HSP 1 Score: 563 bits (1450), Expect = 4.52e-202
Identity = 281/296 (94.93%), Postives = 287/296 (96.96%), Query Frame = 0


Query: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSP-LSSPTSASSVEERGEEN 60
           MSDHLVLYVDRL RPPP+DS+PNP EAVPLLPV GDL+SDS  LSS TSAS+VEERGEEN
Sbjct: 1   MSDHLVLYVDRLVRPPPVDSVPNPAEAVPLLPVGGDLESDSVGLSSSTSASNVEERGEEN 60

Query: 61  EGSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI 120
           EG DGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI
Sbjct: 61  EGLDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI 120

Query: 121 CHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDE 180
           CHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPR LAIAEAEHN+LEAEYD+
Sbjct: 121 CHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYDD 180

Query: 181 YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI 240
           YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI
Sbjct: 181 YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI 240

Query: 241 MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295
           MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV
Sbjct: 241 MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 296

[Close]

BLAST of Cucsat.G9905 vs. ExPASy TrEMBL
Match: A0A1S3BFI9 (uncharacterized protein LOC103489118 OS=Cucumis melo OX=3656 GN=LOC103489118 PE=4 SV=1)

HSP 1 Score: 563 bits (1450), Expect = 4.52e-202
Identity = 281/296 (94.93%), Postives = 287/296 (96.96%), Query Frame = 0


Query: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDSP-LSSPTSASSVEERGEEN 60
           MSDHLVLYVDRL RPPP+DS+PNP EAVPLLPV GDL+SDS  LSS TSAS+VEERGEEN
Sbjct: 1   MSDHLVLYVDRLVRPPPVDSVPNPAEAVPLLPVGGDLESDSVGLSSSTSASNVEERGEEN 60

Query: 61  EGSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI 120
           EG DGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI
Sbjct: 61  EGLDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICEI 120

Query: 121 CHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEYDE 180
           CHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPR LAIAEAEHN+LEAEYD+
Sbjct: 121 CHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYDD 180

Query: 181 YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI 240
           YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI
Sbjct: 181 YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCYI 240

Query: 241 MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295
           MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV
Sbjct: 241 MACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 296

[Close]

BLAST of Cucsat.G9905 vs. ExPASy TrEMBL
Match: A0A6J1JZ00 (uncharacterized protein LOC111489151 OS=Cucurbita maxima OX=3661 GN=LOC111489151 PE=4 SV=1)

HSP 1 Score: 513 bits (1322), Expect = 1.40e-182
Identity = 259/298 (86.91%), Postives = 273/298 (91.61%), Query Frame = 0


Query: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDS---PLSSPTSASSVEERGE 60
           MSDHLVLYVDRL RP P++S+PNP E VP LP+ GDL+ DS   P S  TS S+V+E+ +
Sbjct: 1   MSDHLVLYVDRLIRPVPVESVPNPTEVVPFLPIGGDLEGDSLGFPCS--TSTSNVDEKRK 60

Query: 61  ENEGSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC 120
           E+E  DGEDDSLIQTAECRICQD+D+IRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC
Sbjct: 61  ESEDLDGEDDSLIQTAECRICQDDDIIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC 120

Query: 121 EICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEY 180
           EICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPR LAIAEAEHN+LEAEY
Sbjct: 121 EICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEY 180

Query: 181 DEYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPC 240
           DEYAASDASGAAFCRAAA ILMILLFLRHALEVTDPDGDDYLSAFFSIFLLR AGFLLPC
Sbjct: 181 DEYAASDASGAAFCRAAAFILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRVAGFLLPC 240

Query: 241 YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 295
           YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQ GRHRGLQFAIA GPQMT  Q+TV
Sbjct: 241 YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQ-GRHRGLQFAIASGPQMTSLQDTV 295

[Close]

BLAST of Cucsat.G9905 vs. ExPASy TrEMBL
Match: A0A6J1GZ22 (uncharacterized protein LOC111458795 OS=Cucurbita moschata OX=3662 GN=LOC111458795 PE=4 SV=1)

HSP 1 Score: 513 bits (1321), Expect = 1.99e-182
Identity = 260/297 (87.54%), Postives = 271/297 (91.25%), Query Frame = 0


Query: 1   MSDHLVLYVDRLARPPPLDSIPNPPEAVPLLPVDGDLDSDS---PLSSPTSASSVEERGE 60
           MSDHLVLYVDRL RP P+DS+PNP E VP LPV GDL+ DS   P S  TS S+V+E+  
Sbjct: 1   MSDHLVLYVDRLIRPVPVDSVPNPTEIVPFLPVGGDLEGDSLGFPCS--TSTSNVDEKRI 60

Query: 61  ENEGSDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC 120
           E+E  DGEDDSLIQTAECRICQD+D+IRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC
Sbjct: 61  ESEDLDGEDDSLIQTAECRICQDDDIIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIIC 120

Query: 121 EICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRFLAIAEAEHNILEAEY 180
           EICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPR LAIAEAEHN+LEAEY
Sbjct: 121 EICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEY 180

Query: 181 DEYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPC 240
           DEYAASDASGAAFCRAAA ILMILLFLRHALEVTDPDGDDYLSAFFSIFLLR AGFLLPC
Sbjct: 181 DEYAASDASGAAFCRAAAFILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRVAGFLLPC 240

Query: 241 YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQET 294
           YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQ GRHRGLQFAIA GPQMT  Q+T
Sbjct: 241 YIMACAVNILQRRQRRQEREAAALGAAQVAFVLQ-GRHRGLQFAIASGPQMTSRQDT 294

The following BLAST results are available for this feature:

BLAST of Cucsat.G9905 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q80TE3	3.8e-08	37.84	E3 ubiquitin-protein ligase MARCHF4 OS=Mus musculus OX=10090 GN=Marchf4 PE=2 SV=...	[more]
Q9P2E8	5.5e-07	34.78	E3 ubiquitin-protein ligase MARCHF4 OS=Homo sapiens OX=9606 GN=MARCHF4 PE=2 SV=2	[more]
Q86YJ5	7.1e-07	34.62	E3 ubiquitin-protein ligase MARCHF9 OS=Homo sapiens OX=9606 GN=MARCHF9 PE=1 SV=2	[more]
Q3TZ87	7.1e-07	28.70	E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=...	[more]
F4JKK0	9.3e-07	32.46	Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 S...	[more]

BLAST of Cucsat.G9905 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135456.1	2.00e-214	100.00	uncharacterized protein LOC101205076 [Cucumis sativus] >KGN51915.1 hypothetical ...	[more]
XP_008446351.1	9.33e-202	94.93	PREDICTED: uncharacterized protein LOC103489118 [Cucumis melo] >KAA0034417.1 zin...	[more]
XP_038891937.1	1.25e-190	90.88	uncharacterized protein LOC120081275 [Benincasa hispida]	[more]
XP_023552876.1	2.48e-183	87.58	uncharacterized protein LOC111810398 [Cucurbita pepo subsp. pepo]	[more]
XP_022992994.1	2.89e-182	86.91	uncharacterized protein LOC111489151 [Cucurbita maxima]	[more]

BLAST of Cucsat.G9905 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQL3	9.68e-215	100.00	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G60509...	[more]
A0A5A7SYR0	4.52e-202	94.93	Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BFI9	4.52e-202	94.93	uncharacterized protein LOC103489118 OS=Cucumis melo OX=3656 GN=LOC103489118 PE=...	[more]
A0A6J1JZ00	1.40e-182	86.91	uncharacterized protein LOC111489151 OS=Cucurbita maxima OX=3661 GN=LOC111489151...	[more]
A0A6J1GZ22	1.99e-182	87.54	uncharacterized protein LOC111458795 OS=Cucurbita moschata OX=3662 GN=LOC1114587...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 163..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..68
None	No IPR available	PANTHER	PTHR23012:SF181	E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED	coord: 1..215
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 75..121 e-value: 5.53527E-18 score: 72.7452
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 72..125
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 74..121 e-value: 1.5E-18 score: 77.6
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 75..120 e-value: 4.7E-12 score: 45.8
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 67..127 score: 22.463652
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 126..212 e-value: 6.4E-28 score: 97.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 59..131 e-value: 6.4E-19 score: 69.3
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 1..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G9905.T2	Cucsat.G9905.T2	mRNA
Cucsat.G9905.T1	Cucsat.G9905.T1	mRNA
Cucsat.G9905.T3	Cucsat.G9905.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding