Cucsat.G9776 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G9776
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	ABC transporter B family member 15-like
Location	ctg1673: 2675699 .. 2676096 (-)
RNA-Seq Expression	Cucsat.G9776
Synteny	Cucsat.G9776

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGCCATTTTGATATCTGGAATATGTATCATTTTTGGTGGAATGTGAGTAAATTGACTTCTTTTTTCTTTCCTTAGTAACTACCAAAATTTAATGAAAGTTTGAACACAACGATGTGTCCCTTTGCTTATTGTTCAGATGTGTTATGAATGCACTCCCAAATCTCTCGTTTATCTCTGAGTCAACAATTGCTGCATCTCGAATTTTCGAGATGGTTGATCGCATTCCTGTCATTGATGCTGAAGATGGTAAAGGAAAAACTTTGGACTGTTTAAGAGGAAAGATTGAATTTAGAGATGTTGAGTTTTCGTATCCGTCAAGACCTGCAACCTCAATTCTTCAAGGACTTAATCTCAAAGTGAATGCTGGGGAGACAGTAGGCCTTGTTGGAGGTAGTG

Coding sequence (CDS)

GGAGCCATTTTGATATCTGGAATATGTATCATTTTTGGTGGAATATGTGTTATGAATGCACTCCCAAATCTCTCGTTTATCTCTGAGTCAACAATTGCTGCATCTCGAATTTTCGAGATGGTTGATCGCATTCCTGTCATTGATGCTGAAGATGGTAAAGGAAAAACTTTGGACTGTTTAAGAGGAAAGATTGAATTTAGAGATGTTGAGTTTTCGTATCCGTCAAGACCTGCAACCTCAATTCTTCAAGGACTTAATCTCAAAGTGAATGCTGGGGAGACAGTAGGCCTTGTTGGAGGTAGT

Protein sequence

GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCLRGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS

Homology

[Close]

BLAST of Cucsat.G9776 vs. ExPASy Swiss-Prot
Match: Q6YUU5 (Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0190300 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.1e-18
Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           G +      I+ GG+ + + L N+ + SE++ AA RI E++ R+P ID+E   G+ L  +
Sbjct: 296 GTVFAVSAAIVVGGLALGSGLSNVKYFSEASSAAERILEVIRRVPKIDSESDTGEELANV 355

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 102
            G++EFR+VEF YPSRP + I    NL+V AG TV LVGGS
Sbjct: 356 TGEVEFRNVEFCYPSRPESPIFVSFNLRVPAGRTVALVGGS 396

[Close]

BLAST of Cucsat.G9776 vs. ExPASy Swiss-Prot
Match: Q9LSJ8 (ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.0e-18
Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           G +    +C+ FGG  +  AL NL + SE+ +A  RI +M+ R+P ID+++  G  L+ +
Sbjct: 283 GTVSTVTVCVTFGGTALGQALSNLKYFSEAFVAGERIQKMIKRVPDIDSDNLNGHILETI 342

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 102
           RG++EF +V+  YPSRP T I   L LK+ +G+TV LVGGS
Sbjct: 343 RGEVEFNNVKCKYPSRPETLIFDDLCLKIPSGKTVALVGGS 383

[Close]

BLAST of Cucsat.G9776 vs. ExPASy Swiss-Prot
Match: Q9LSJ5 (ABC transporter B family member 18 OS=Arabidopsis thaliana OX=3702 GN=ABCB18 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.9e-18
Identity = 41/94 (43.62%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 8   ICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCLRGKIEFR 67
           +C+ FGG  +  +L NL + SE+ +   RI ++++R+P ID+++ +G+ L+  RG++EF 
Sbjct: 291 VCVTFGGTSLGQSLSNLKYFSEAFVVGERIMKVINRVPGIDSDNLEGQILEKTRGEVEFN 350

Query: 68  DVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 102
            V+F+YPSRP T I   L L+V +G+TV LVGGS
Sbjct: 351 HVKFTYPSRPETPIFDDLCLRVPSGKTVALVGGS 384

[Close]

BLAST of Cucsat.G9776 vs. ExPASy Swiss-Prot
Match: Q9LSJ6 (ABC transporter B family member 17 OS=Arabidopsis thaliana OX=3702 GN=ABCB17 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-17
Identity = 43/101 (42.57%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           G + +   CI +GG+ +  +L NL + SE+ +A  RI E++ R+P ID+   +G+ L+ +
Sbjct: 296 GTVFVVISCITYGGVSLGQSLSNLKYFSEAFVAWERILEVIKRVPDIDSNKKEGQILERM 355

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 102
           +G++EF  V+F+Y SRP T+I   L LK+ AG+TV LVGGS
Sbjct: 356 KGEVEFNHVKFTYLSRPETTIFDDLCLKIPAGKTVALVGGS 396

[Close]

BLAST of Cucsat.G9776 vs. ExPASy Swiss-Prot
Match: Q9LSJ2 (ABC transporter B family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCB22 PE=3 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 3.4e-17
Identity = 41/101 (40.59%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           G I    ICI +GG  +   L NL + SE+ +A  RI E++ R+P ID+++ +G+ L+ +
Sbjct: 283 GTIFAVIICITYGGTSLGRGLSNLKYFSEAVVAGERIIEVIKRVPDIDSDNPRGQVLENI 342

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 102
           +G+++F+ V+F Y SRP T I   L L++ +G++V LVGGS
Sbjct: 343 KGEVQFKHVKFMYSSRPETPIFDDLCLRIPSGKSVALVGGS 383

[Close]

BLAST of Cucsat.G9776 vs. NCBI nr
Match: XP_004135503.1 (ABC transporter B family member 15 [Cucumis sativus] >KAE8648690.1 hypothetical protein Csa_008119 [Cucumis sativus])

HSP 1 Score: 196 bits (497), Expect = 1.64e-55
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL
Sbjct: 282 GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 341

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 101
           RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS
Sbjct: 342 RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 382

[Close]

BLAST of Cucsat.G9776 vs. NCBI nr
Match: TYK15677.1 (putative multidrug resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 184 bits (467), Expect = 1.82e-51
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           GAILISGICIIFGGIC MNALPNLSFISESTIAASRIFEM+DRIPVIDAEDGKGK+LD L
Sbjct: 282 GAILISGICIIFGGICAMNALPNLSFISESTIAASRIFEMIDRIPVIDAEDGKGKSLDRL 341

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 101
           RGKIEFRDVEFSYPSRP TSILQG NLKVNAGETVGLVGGS
Sbjct: 342 RGKIEFRDVEFSYPSRPETSILQGFNLKVNAGETVGLVGGS 382

[Close]

BLAST of Cucsat.G9776 vs. NCBI nr
Match: KAA0034243.1 (putative multidrug resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 184 bits (467), Expect = 1.82e-51
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           GAILISGICIIFGGIC MNALPNLSFISESTIAASRIFEM+DRIPVIDAEDGKGK+LD L
Sbjct: 282 GAILISGICIIFGGICAMNALPNLSFISESTIAASRIFEMIDRIPVIDAEDGKGKSLDRL 341

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 101
           RGKIEFRDVEFSYPSRP TSILQG NLKVNAGETVGLVGGS
Sbjct: 342 RGKIEFRDVEFSYPSRPETSILQGFNLKVNAGETVGLVGGS 382

[Close]

BLAST of Cucsat.G9776 vs. NCBI nr
Match: XP_008446126.1 (PREDICTED: putative multidrug resistance protein [Cucumis melo])

HSP 1 Score: 184 bits (467), Expect = 1.82e-51
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           GAILISGICIIFGGIC MNALPNLSFISESTIAASRIFEM+DRIPVIDAEDGKGK+LD L
Sbjct: 282 GAILISGICIIFGGICAMNALPNLSFISESTIAASRIFEMIDRIPVIDAEDGKGKSLDRL 341

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 101
           RGKIEFRDVEFSYPSRP TSILQG NLKVNAGETVGLVGGS
Sbjct: 342 RGKIEFRDVEFSYPSRPETSILQGFNLKVNAGETVGLVGGS 382

[Close]

BLAST of Cucsat.G9776 vs. NCBI nr
Match: XP_022151783.1 (ABC transporter B family member 15-like [Momordica charantia])

HSP 1 Score: 163 bits (412), Expect = 4.71e-44
Identity = 83/101 (82.18%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           G ILISGICIIFGG+C MNALPNLSFISEST+AA+RIF+M D IP IDA DG+GKTLD L
Sbjct: 282 GPILISGICIIFGGLCAMNALPNLSFISESTLAAARIFKMTDCIPAIDAGDGRGKTLDHL 341

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 101
           +G+IEFRDVEFSYPSRP   ILQGLNLKV AGETVGLVGGS
Sbjct: 342 KGRIEFRDVEFSYPSRPENPILQGLNLKVKAGETVGLVGGS 382

[Close]

BLAST of Cucsat.G9776 vs. ExPASy TrEMBL
Match: A0A0A0KQ07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G593380 PE=4 SV=1)

HSP 1 Score: 196 bits (497), Expect = 7.68e-56
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL
Sbjct: 184 GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 243

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 101
           RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS
Sbjct: 244 RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 284

[Close]

BLAST of Cucsat.G9776 vs. ExPASy TrEMBL
Match: A0A5A7SUU5 (Putative multidrug resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G002420 PE=4 SV=1)

HSP 1 Score: 184 bits (467), Expect = 8.80e-52
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           GAILISGICIIFGGIC MNALPNLSFISESTIAASRIFEM+DRIPVIDAEDGKGK+LD L
Sbjct: 282 GAILISGICIIFGGICAMNALPNLSFISESTIAASRIFEMIDRIPVIDAEDGKGKSLDRL 341

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 101
           RGKIEFRDVEFSYPSRP TSILQG NLKVNAGETVGLVGGS
Sbjct: 342 RGKIEFRDVEFSYPSRPETSILQGFNLKVNAGETVGLVGGS 382

[Close]

BLAST of Cucsat.G9776 vs. ExPASy TrEMBL
Match: A0A5D3CUV1 (Putative multidrug resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001740 PE=4 SV=1)

HSP 1 Score: 184 bits (467), Expect = 8.80e-52
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           GAILISGICIIFGGIC MNALPNLSFISESTIAASRIFEM+DRIPVIDAEDGKGK+LD L
Sbjct: 282 GAILISGICIIFGGICAMNALPNLSFISESTIAASRIFEMIDRIPVIDAEDGKGKSLDRL 341

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 101
           RGKIEFRDVEFSYPSRP TSILQG NLKVNAGETVGLVGGS
Sbjct: 342 RGKIEFRDVEFSYPSRPETSILQGFNLKVNAGETVGLVGGS 382

[Close]

BLAST of Cucsat.G9776 vs. ExPASy TrEMBL
Match: A0A1S3BEB7 (putative multidrug resistance protein OS=Cucumis melo OX=3656 GN=LOC103488944 PE=4 SV=1)

HSP 1 Score: 184 bits (467), Expect = 8.80e-52
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           GAILISGICIIFGGIC MNALPNLSFISESTIAASRIFEM+DRIPVIDAEDGKGK+LD L
Sbjct: 282 GAILISGICIIFGGICAMNALPNLSFISESTIAASRIFEMIDRIPVIDAEDGKGKSLDRL 341

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 101
           RGKIEFRDVEFSYPSRP TSILQG NLKVNAGETVGLVGGS
Sbjct: 342 RGKIEFRDVEFSYPSRPETSILQGFNLKVNAGETVGLVGGS 382

[Close]

BLAST of Cucsat.G9776 vs. ExPASy TrEMBL
Match: A0A6J1DD49 (ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111019682 PE=4 SV=1)

HSP 1 Score: 163 bits (412), Expect = 2.28e-44
Identity = 83/101 (82.18%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 1   GAILISGICIIFGGICVMNALPNLSFISESTIAASRIFEMVDRIPVIDAEDGKGKTLDCL 60
           G ILISGICIIFGG+C MNALPNLSFISEST+AA+RIF+M D IP IDA DG+GKTLD L
Sbjct: 282 GPILISGICIIFGGLCAMNALPNLSFISESTLAAARIFKMTDCIPAIDAGDGRGKTLDHL 341

Query: 61  RGKIEFRDVEFSYPSRPATSILQGLNLKVNAGETVGLVGGS 101
           +G+IEFRDVEFSYPSRP   ILQGLNLKV AGETVGLVGGS
Sbjct: 342 KGRIEFRDVEFSYPSRPENPILQGLNLKVKAGETVGLVGGS 382

The following BLAST results are available for this feature:

BLAST of Cucsat.G9776 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YUU5	3.1e-18	44.55	Putative multidrug resistance protein OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9LSJ8	4.0e-18	43.56	ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=...	[more]
Q9LSJ5	6.9e-18	43.62	ABC transporter B family member 18 OS=Arabidopsis thaliana OX=3702 GN=ABCB18 PE=...	[more]
Q9LSJ6	1.2e-17	42.57	ABC transporter B family member 17 OS=Arabidopsis thaliana OX=3702 GN=ABCB17 PE=...	[more]
Q9LSJ2	3.4e-17	40.59	ABC transporter B family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCB22 PE=...	[more]

BLAST of Cucsat.G9776 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135503.1	1.64e-55	100.00	ABC transporter B family member 15 [Cucumis sativus] >KAE8648690.1 hypothetical ...	[more]
TYK15677.1	1.82e-51	94.06	putative multidrug resistance protein [Cucumis melo var. makuwa]	[more]
KAA0034243.1	1.82e-51	94.06	putative multidrug resistance protein [Cucumis melo var. makuwa]	[more]
XP_008446126.1	1.82e-51	94.06	PREDICTED: putative multidrug resistance protein [Cucumis melo]	[more]
XP_022151783.1	4.71e-44	82.18	ABC transporter B family member 15-like [Momordica charantia]	[more]

BLAST of Cucsat.G9776 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ07	7.68e-56	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G593380 PE=4 SV=1	[more]
A0A5A7SUU5	8.80e-52	94.06	Putative multidrug resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3CUV1	8.80e-52	94.06	Putative multidrug resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BEB7	8.80e-52	94.06	putative multidrug resistance protein OS=Cucumis melo OX=3656 GN=LOC103488944 PE...	[more]
A0A6J1DD49	2.28e-44	82.18	ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 54..101 e-value: 2.1E-33 score: 117.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 55..101
IPR036640	ABC transporter type 1, transmembrane domain superfamily	GENE3D	1.20.1560.10	ABC transporter type 1, transmembrane domain	coord: 2..53 e-value: 2.1E-33 score: 117.1
None	No IPR available	PANTHER	PTHR24222:SF48	ABC TRANSPORTER B FAMILY MEMBER 15	coord: 1..101
None	No IPR available	PANTHER	PTHR24222	ABC TRANSPORTER B FAMILY	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G9776.T1	Cucsat.G9776.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity