Cucsat.G950 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCTGAAAAAAAAAAAAGGAAAGAAAGAAATAAAAAAAAAGAAAAAAGAAAAGAAAAATCTCAAGTTTCGTCTCTCCTATCTCCTCTTTACAAATGGACCCACTGACGCAGCTTAGCTTACCGCCGGGATTCAGATTTTTTCCGACCGATGAAGAACTTTTAGTTCAATATCTTTGCCGGAAAGTCGCCGGCCACCATTTCAGCTTGCAACTCATCGCTGAGATTGACTTGTACAAATTCGATCCATGGGTTTTACCTGGTAAGATTCAAAAACCAACCAAACCCAACTAAATCCCTCAATCAAATCTCATTTTATTAGCTTTTAAAATTGTAAAATTAACGATAATTATGACTTGCAGGAAAGGCTTTATTCGGGGAAAAGGAATGGTACTTTTTCAGCCCAAGAGACCGCAAATATCCAAACGGGTCTAGACCAAACCGGGTAGCCGGTTCGGGTTACTGGAAGGCAACTGGTACGGATAAAATCATCTCCTCGGAAGGGAAGAACGTCGGAATTAAAAAGGCTCTGGTTTTCTATGTCGGAAAAGCTCCGAAGGGAACAAAAACGAATTGGATTATGCACGAGTATCGCCTTATTACATCCTCCAGAAAGACAGGAAGCTCCAAGGTAAAACAAACAACAAATTTTATAATTCAATCCAACATTTTAATTTTCTTTTATTTTGGACTAATGGGATTTTTTTACAATTTAATTTTCAGCTGGACGATTGGGTTTTATGTCGGATTTATAAGAAGAATTCGAGCTGTCAAAAGCCGACGGGGAGTATTTCAAGTAAAGAATACAGTAACGCCTCACCCTCATCTTCAATAGACGAAGTCATCGAATCTCTACCAGAAACGGGCGATGATTTCTTTGCATACCCAAAAACGACATTACAACAAAACGACATTATGAATAGATTCAACTTTGAAATTCCTGCGGACTCTGTACATTCCGATTGGGCGAGTTTGGCCGGGCTTTACTCAGTGCCGGAACTCGGTCCCGTGGACCATTCGGGAACATTCGATTTCAACAACAACAATAACACCATCGCTGATCTGTATGTTCCTTCAGTTACATCGCCGTTTTGCCAGGTGGATTATCCGCCAGCGTCGGCGTTCCGTTATTCGACGCAACAAAGGGACGGCGGCGGAGTATTCGGATTCAGCCAATGAGATGGATACACTGGGCATCTGGATTTTACAAAGGGAGTGTAAATAGAATTGGATTCTGAAAATGGAAGCAAAAGGAAAAAATTTGCTTTCTTTTTTGAAGGGAAAAAGAGAATGAAGAAAGAAAAAGTGAAAAACAGAGCATACTCTGTTTTTTACCATAAATTTTGAGTTCTCTAACGAGTTTAATGTCCCATTCTATTAGACATTAGATTAAACAATGGAACACACTTGTACAAATTATTGTTTAGGATTGGAACTTCATTAATTAGTTTAGTGTATTAGTTTTTTGGAAATTATTTTTCTTTTCTCTGCTCATCCTTTAATAAATTATTATACGATTGTTATGAGTTTTTGGATTGCTTGTAAGAAAAAAAGAAAAAAAGGAGAAAAATTGTTAATGCCAATTGGGTGCAAAGAAATTGATGTTTATTAAATCAAATGTTGTTTTGAAAAAATATCACCTAAAACTTGACTTTTGGTTTATGAAAATAAAATGATGGCTTTGAAATAAAT ATGGACCCACTGACGCAGCTTAGCTTACCGCCGGGATTCAGATTTTTTCCGACCGATGAAGAACTTTTAGTTCAATATCTTTGCCGGAAAGTCGCCGGCCACCATTTCAGCTTGCAACTCATCGCTGAGATTGACTTGTACAAATTCGATCCATGGGTTTTACCTGGAAAGGCTTTATTCGGGGAAAAGGAATGGTACTTTTTCAGCCCAAGAGACCGCAAATATCCAAACGGGTCTAGACCAAACCGGGTAGCCGGTTCGGGTTACTGGAAGGCAACTGGTACGGATAAAATCATCTCCTCGGAAGGGAAGAACGTCGGAATTAAAAAGGCTCTGGTTTTCTATGTCGGAAAAGCTCCGAAGGGAACAAAAACGAATTGGATTATGCACGAGTATCGCCTTATTACATCCTCCAGAAAGACAGGAAGCTCCAAGCTGGACGATTGGGTTTTATGTCGGATTTATAAGAAGAATTCGAGCTGTCAAAAGCCGACGGGGAGTATTTCAAGTAAAGAATACAGTAACGCCTCACCCTCATCTTCAATAGACGAAGTCATCGAATCTCTACCAGAAACGGGCGATGATTTCTTTGCATACCCAAAAACGACATTACAACAAAACGACATTATGAATAGATTCAACTTTGAAATTCCTGCGGACTCTGTACATTCCGATTGGGCGAGTTTGGCCGGGCTTTACTCAGTGCCGGAACTCGGTCCCGTGGACCATTCGGGAACATTCGATTTCAACAACAACAATAACACCATCGCTGATCTGTATGTTCCTTCAGTTACATCGCCGTTTTGCCAGGTGGATTATCCGCCAGCGTCGGCGTTCCGTTATTCGACGCAACAAAGGGACGGCGGCGGAGTATTCGGATTCAGCCAATGA MDPLTQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLQLIAEIDLYKFDPWVLPGKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISSEGKNVGIKKALVFYVGKAPKGTKTNWIMHEYRLITSSRKTGSSKLDDWVLCRIYKKNSSCQKPTGSISSKEYSNASPSSSIDEVIESLPETGDDFFAYPKTTLQQNDIMNRFNFEIPADSVHSDWASLAGLYSVPELGPVDHSGTFDFNNNNNTIADLYVPSVTSPFCQVDYPPASAFRYSTQQRDGGGVFGFSQ Homology
BLAST of Cucsat.G950 vs. ExPASy Swiss-Prot
Match: Q9SQL0 (NAC domain-containing protein JA2 OS=Solanum lycopersicum OX=4081 GN=JA2 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.8e-22 Identity = 70/151 (46.36%), Postives = 89/151 (58.94%), Query Frame = 0
BLAST of Cucsat.G950 vs. ExPASy Swiss-Prot
Match: A0A3Q7HH64 (NAC domain-containing protein JA2L OS=Solanum lycopersicum OX=4081 GN=JA2L PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.6e-19 Identity = 59/118 (50.00%), Postives = 76/118 (64.41%), Query Frame = 0
BLAST of Cucsat.G950 vs. ExPASy Swiss-Prot
Match: Q93VY3 (NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.1e-17 Identity = 54/121 (44.63%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Cucsat.G950 vs. ExPASy Swiss-Prot
Match: Q9LDY8 (NAC domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=NAC055 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.8e-16 Identity = 73/197 (37.06%), Postives = 93/197 (47.21%), Query Frame = 0
BLAST of Cucsat.G950 vs. ExPASy Swiss-Prot
Match: Q9C932 (NAC domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NAC019 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.1e-15 Identity = 56/129 (43.41%), Postives = 76/129 (58.91%), Query Frame = 0
BLAST of Cucsat.G950 vs. NCBI nr
Match: XP_004133700.1 (NAC domain-containing protein JA2L [Cucumis sativus] >KGN56222.1 hypothetical protein Csa_011476 [Cucumis sativus]) HSP 1 Score: 345 bits (884), Expect = 8.96e-118 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Cucsat.G950 vs. NCBI nr
Match: KAA0060691.1 (NAC domain-containing protein 55 [Cucumis melo var. makuwa] >TYK03302.1 NAC domain-containing protein 55 [Cucumis melo var. makuwa]) HSP 1 Score: 339 bits (870), Expect = 1.21e-115 Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Cucsat.G950 vs. NCBI nr
Match: XP_008452273.1 (PREDICTED: NAC domain-containing protein 55 [Cucumis melo]) HSP 1 Score: 336 bits (862), Expect = 2.00e-114 Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0
BLAST of Cucsat.G950 vs. NCBI nr
Match: XP_038906268.1 (NAC domain-containing protein JA2-like [Benincasa hispida]) HSP 1 Score: 296 bits (757), Expect = 1.98e-98 Identity = 149/171 (87.13%), Postives = 160/171 (93.57%), Query Frame = 0
BLAST of Cucsat.G950 vs. NCBI nr
Match: XP_022929306.1 (NAC domain-containing protein 72-like [Cucurbita moschata]) HSP 1 Score: 251 bits (640), Expect = 1.15e-80 Identity = 132/173 (76.30%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Cucsat.G950 vs. ExPASy TrEMBL
Match: A0A0A0L6K6 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G101810 PE=4 SV=1) HSP 1 Score: 345 bits (884), Expect = 4.34e-118 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Cucsat.G950 vs. ExPASy TrEMBL
Match: A0A5A7V4M4 (NAC domain-containing protein 55 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001420 PE=4 SV=1) HSP 1 Score: 339 bits (870), Expect = 5.86e-116 Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Cucsat.G950 vs. ExPASy TrEMBL
Match: A0A1S3BSV4 (NAC domain-containing protein 55 OS=Cucumis melo OX=3656 GN=LOC103493346 PE=4 SV=1) HSP 1 Score: 336 bits (862), Expect = 9.66e-115 Identity = 164/168 (97.62%), Postives = 165/168 (98.21%), Query Frame = 0
BLAST of Cucsat.G950 vs. ExPASy TrEMBL
Match: A0A6J1EMS0 (NAC domain-containing protein 72-like OS=Cucurbita moschata OX=3662 GN=LOC111435928 PE=4 SV=1) HSP 1 Score: 251 bits (640), Expect = 5.58e-81 Identity = 132/173 (76.30%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Cucsat.G950 vs. ExPASy TrEMBL
Match: A0A6J1JCG8 (NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC111483146 PE=4 SV=1) HSP 1 Score: 247 bits (630), Expect = 1.95e-79 Identity = 131/175 (74.86%), Postives = 145/175 (82.86%), Query Frame = 0
BLAST of Cucsat.G950 vs. TAIR 10
Match: AT4G27410.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 8.1e-19 Identity = 54/121 (44.63%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Cucsat.G950 vs. TAIR 10
Match: AT4G27410.2 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 8.1e-19 Identity = 54/121 (44.63%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Cucsat.G950 vs. TAIR 10
Match: AT4G27410.3 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 8.1e-19 Identity = 54/121 (44.63%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Cucsat.G950 vs. TAIR 10
Match: AT3G15500.1 (NAC domain containing protein 3 ) HSP 1 Score: 86.7 bits (213), Expect = 2.0e-17 Identity = 73/197 (37.06%), Postives = 93/197 (47.21%), Query Frame = 0
BLAST of Cucsat.G950 vs. TAIR 10
Match: AT1G52890.1 (NAC domain containing protein 19 ) HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16 Identity = 56/129 (43.41%), Postives = 76/129 (58.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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