Cucsat.G8878 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8878
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	40S ribosomal protein S15a
Location	ctg1635: 1010562 .. 1012123 (-)
RNA-Seq Expression	Cucsat.G8878
Synteny	Cucsat.G8878

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGTTTACAACCCAGCCCTATTTTAAACGGCACTATAAATAAATTAGGTTTCATCTTCTCTCTTCTCTCTTTTCACTCAGCCGTTGAAGAAGCAGAAGCCCTAATTCCCATTCGAACTCTGCAATTTTCGTCTTCTGGCCTCCCTTCTCTCTCGGGTTTGTTTTGAATTTCTTTCGTTTCATTCTTTATTTACTTCTTCTAGTCGATGATTTAAGCGTAGAAGTCAAATTTATACACTGCTTATAGATAAATTGGATTTTTTTTCTAGAAAGGATTGACTGTATGATTTGTTAATTAATTTCATAGGTCGTTTTTTTTATTTAATGATTCATATTAGAAGTAGGGTTTTATCATTTGAGAAGATATACACATTTTTAGTTGTTCGTTTAATTTTGCGGCGTTCTTAACTTGAACTTTGGGGATTTATGTATTTGCAGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGTATACGTTGTTTAGCAATTTCATTTCCATCTCATTCGTTGCAACACCTTAAACCTGTTTAATTTTGGTTCTGTTAAAAATTTCATTGTTTTAGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAGCTGAATGGGAGACTTAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGGTATGTTTCTTTCTTAATTGTATTATGTTAAGACTTGTTTGTATTTTACTCGAATCCGAACTTTTTATAACAAACGACATCCGCATGATTGCAGTTTGGATTCATCGTCTTGACTACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAAGTAATGTTGTGAGATTGGTTTTTCTTCTTTTTGGTATTTTCTGCACTTTTGAACTTAGATGGGGAAGCAGTAGAGAGTCCTGTTTTGTTTTTAGTTGCTGTTTTGGTTGGTGGGGAGGATACAGGAGATTTGGCCTGCATTCTTTTTGGAGACTTTCATGAGCCATTTTTCTTAATCTATGAGTTTTATTTGTTTGCTATACTAAAACTGGAATTGCCATAGTTTTCAAGCTTTGGAATTCATTGCAATTTTCTCAGACAGCAATTATGTTCCCTCACCCACCCATCAATTTGTGTGTTCTATATCATATTTATGTATGATTCCTTCTCCATCTTTTGATGATTCTTTTCAATTCTTCTATCTTACAATTATATGATCCTTTTGGGCAACTTTAATAGATAATTCTAGAACTGAAAATTGGAGACTTAGTTTTGGTAGAATGAACCACCATGGTTTTTTATCACTGTTCCAAATGATTTGTTCAGTCTAGACAACTATATGTGCTATGGTTGAGATATGAATCGCGAGCTTTGCGTGT

Coding sequence (CDS)

AGTTTACAACCCAGCCCTATTTTAAACGGCACTATAAATAAATTAGGTTTCATCTTCTCTCTTCTCTCTTTTCACTCAGCCGTTGAAGAAGCAGAAGCCCTAATTCCCATTCGAACTCTGCAATTTTCGTCTTCTGGCCTCCCTTCTCTCTCGGTAATAATGGTGCGTGTGAGTGTTCTGAATGATGCGCTTAAAAGCATGTATAATGCTGAGAAACGAGGGAAGCGTCAGGTCATGATAAGACCGTCTTCTAAAGTTATCATCAAGTTTCTTCTCGTTATGCAGAAGCACGGATACATTGGGGAGTTTGAGTTCGTTGATGACCATAGATCAGGGAAAATTGTTGTTGAGCTGAATGGGAGACTTAACAAATGTGGTGTCATAAGTCCCCGTTTTGATGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGCTACCCTCTAGACAGTTTGGATTCATCGTCTTGACTACATCTGCGGGAATCATGGATCACGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAAAGTGCTTGGTTTCTTTTACTAA

Protein sequence

SLQPSPILNGTINKLGFIFSLLSFHSAVEEAEALIPIRTLQFSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY

Homology

[Close]

BLAST of Cucsat.G8878 vs. ExPASy Swiss-Prot
Match: P42798 (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 261.9 bits (668), Expect = 5.3e-69
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 174 VGGKVLGFFY 184
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Cucsat.G8878 vs. ExPASy Swiss-Prot
Match: Q9LX88 (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 261.5 bits (667), Expect = 6.9e-69
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 174 VGGKVLGFFY 184
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Cucsat.G8878 vs. ExPASy Swiss-Prot
Match: Q00332 (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 260.4 bits (664), Expect = 1.5e-68
Identity = 125/130 (96.15%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 174 VGGKVLGFFY 184
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Cucsat.G8878 vs. ExPASy Swiss-Prot
Match: Q9AT34 (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 257.3 bits (656), Expect = 1.3e-67
Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 174 VGGKVLGFFY 184
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Cucsat.G8878 vs. ExPASy Swiss-Prot
Match: O80646 (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-63
Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 1   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEAR+KN
Sbjct: 61  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 120

Query: 174 VGGKVLGFFY 184
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Cucsat.G8878 vs. NCBI nr
Match: XP_004144630.1 (40S ribosomal protein S15a-1 [Cucumis sativus] >XP_008457542.1 PREDICTED: 40S ribosomal protein S15a-1 [Cucumis melo] >XP_008465450.1 PREDICTED: 40S ribosomal protein S15a-1 [Cucumis melo] >XP_011657911.1 40S ribosomal protein S15a-1 [Cucumis sativus] >XP_038893650.1 40S ribosomal protein S15a-1 [Benincasa hispida] >XP_038897125.1 40S ribosomal protein S15a-1 [Benincasa hispida] >KAA0033910.1 40S ribosomal protein S15a-1 [Cucumis melo var. makuwa] >BAA89231.1 wrp15a [Citrullus lanatus] >KAA0052378.1 40S ribosomal protein S15a-1 [Cucumis melo var. makuwa] >KAE8649788.1 hypothetical protein Csa_011988 [Cucumis sativus] >KAE8653230.1 hypothetical protein Csa_019672 [Cucumis sativus])

HSP 1 Score: 264 bits (674), Expect = 5.31e-88
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 174 VGGKVLGFFY 183
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Cucsat.G8878 vs. NCBI nr
Match: KAG5557696.1 (hypothetical protein RHGRI_007820 [Rhododendron griersonianum])

HSP 1 Score: 264 bits (674), Expect = 9.43e-88
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 18  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 77

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 78  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 137

Query: 174 VGGKVLGFFY 183
           VGGKVLGFFY
Sbjct: 138 VGGKVLGFFY 147

[Close]

BLAST of Cucsat.G8878 vs. NCBI nr
Match: KAF7133456.1 (hypothetical protein RHSIM_Rhsim09G0164200 [Rhododendron simsii])

HSP 1 Score: 264 bits (674), Expect = 1.01e-87
Identity = 133/144 (92.36%), Postives = 136/144 (94.44%), Query Frame = 0


Query: 40  LQFSSSGLPSLSVIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGY 99
           LQF+     +L   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGY
Sbjct: 6   LQFTGLVGGALRAKMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGY 65

Query: 100 IGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTT 159
           IGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTT
Sbjct: 66  IGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTT 125

Query: 160 SAGIMDHEEARRKNVGGKVLGFFY 183
           SAGIMDHEEARRKNVGGKVLGFFY
Sbjct: 126 SAGIMDHEEARRKNVGGKVLGFFY 149

[Close]

BLAST of Cucsat.G8878 vs. NCBI nr
Match: KAE9451430.1 (hypothetical protein C3L33_16699, partial [Rhododendron williamsianum] >KAG5533434.1 hypothetical protein RHGRI_027562 [Rhododendron griersonianum])

HSP 1 Score: 263 bits (672), Expect = 1.07e-87
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEFVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 174 VGGKVLGFFY 183
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Cucsat.G8878 vs. NCBI nr
Match: KAF7148267.1 (hypothetical protein RHSIM_Rhsim03G0129000 [Rhododendron simsii])

HSP 1 Score: 264 bits (674), Expect = 1.08e-87
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 22  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 81

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 82  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 141

Query: 174 VGGKVLGFFY 183
           VGGKVLGFFY
Sbjct: 142 VGGKVLGFFY 151

[Close]

BLAST of Cucsat.G8878 vs. ExPASy TrEMBL
Match: A0A0A0KZP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608140 PE=3 SV=1)

HSP 1 Score: 359 bits (922), Expect = 7.46e-125
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   SLQPSPILNGTINKLGFIFSLLSFHSAVEEAEALIPIRTLQFSSSGLPSLSVIMVRVSVL 60
           SLQPSPILNGTINKLGFIFSLLSFHSAVEEAEALIPIRTLQFSSSGLPSLSVIMVRVSVL
Sbjct: 32  SLQPSPILNGTINKLGFIFSLLSFHSAVEEAEALIPIRTLQFSSSGLPSLSVIMVRVSVL 91

Query: 61  NDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNG 120
           NDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNG
Sbjct: 92  NDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNG 151

Query: 121 RLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLG 180
           RLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLG
Sbjct: 152 RLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLG 211

Query: 181 FFY 183
           FFY
Sbjct: 212 FFY 214

[Close]

BLAST of Cucsat.G8878 vs. ExPASy TrEMBL
Match: A0A1S3CPB7 (40S ribosomal protein S15a-1 OS=Cucumis melo OX=3656 GN=LOC103503055 PE=3 SV=1)

HSP 1 Score: 264 bits (674), Expect = 2.57e-88
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 174 VGGKVLGFFY 183
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Cucsat.G8878 vs. ExPASy TrEMBL
Match: A0A5A7SSH5 (40S ribosomal protein S15a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00840 PE=3 SV=1)

HSP 1 Score: 264 bits (674), Expect = 2.57e-88
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 174 VGGKVLGFFY 183
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Cucsat.G8878 vs. ExPASy TrEMBL
Match: Q9SBL9 (Wrp15a OS=Citrullus lanatus OX=3654 GN=wrp15a PE=2 SV=1)

HSP 1 Score: 264 bits (674), Expect = 2.57e-88
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 174 VGGKVLGFFY 183
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]

BLAST of Cucsat.G8878 vs. ExPASy TrEMBL
Match: A0A6A4L076 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_16699 PE=3 SV=1)

HSP 1 Score: 263 bits (672), Expect = 5.19e-88
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 54  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 113
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEFVDDHRSGK 60

Query: 114 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 173
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 174 VGGKVLGFFY 183
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

The following BLAST results are available for this feature:

BLAST of Cucsat.G8878 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42798	5.3e-69	96.92	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=...	[more]
Q9LX88	6.9e-69	96.92	40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=...	[more]
Q00332	1.5e-68	96.15	40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3	[more]
Q9AT34	1.3e-67	95.38	40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3	[more]
O80646	1.1e-63	90.00	40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=...	[more]

BLAST of Cucsat.G8878 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144630.1	5.31e-88	100.00	40S ribosomal protein S15a-1 [Cucumis sativus] >XP_008457542.1 PREDICTED: 40S ri...	[more]
KAG5557696.1	9.43e-88	100.00	hypothetical protein RHGRI_007820 [Rhododendron griersonianum]	[more]
KAF7133456.1	1.01e-87	92.36	hypothetical protein RHSIM_Rhsim09G0164200 [Rhododendron simsii]	[more]
KAE9451430.1	1.07e-87	99.23	hypothetical protein C3L33_16699, partial [Rhododendron williamsianum] >KAG55334...	[more]
KAF7148267.1	1.08e-87	100.00	hypothetical protein RHSIM_Rhsim03G0129000 [Rhododendron simsii]	[more]

BLAST of Cucsat.G8878 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZP3	7.46e-125	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608140 PE=3 SV=1	[more]
A0A1S3CPB7	2.57e-88	100.00	40S ribosomal protein S15a-1 OS=Cucumis melo OX=3656 GN=LOC103503055 PE=3 SV=1	[more]
A0A5A7SSH5	2.57e-88	100.00	40S ribosomal protein S15a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
Q9SBL9	2.57e-88	100.00	Wrp15a OS=Citrullus lanatus OX=3654 GN=wrp15a PE=2 SV=1	[more]
A0A6A4L076	5.19e-88	99.23	Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1490.10		coord: 123..183 e-value: 2.6E-36 score: 125.0
None	No IPR available	GENE3D	3.30.1370.30		coord: 54..122 e-value: 1.9E-35 score: 122.5
None	No IPR available	PANTHER	PTHR11758:SF39	OS02G0478600 PROTEIN	coord: 54..183
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 60..183 e-value: 3.5E-21 score: 75.4
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 54..183
IPR000630	Ribosomal protein S8	PROSITE	PS00053	RIBOSOMAL_S8	coord: 153..170
IPR000630	Ribosomal protein S8	HAMAP	MF_01302_A	Ribosomal_S8_A	coord: 55..183 score: 32.288784
IPR035987	Ribosomal protein S8 superfamily	SUPERFAMILY	56047	Ribosomal protein S8	coord: 57..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8878.T1	Cucsat.G8878.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome