Cucsat.G8872 (gene) Cucumber (B10) v3

Overview
NameCucsat.G8872
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationctg1635: 856608 .. 859208 (-)
RNA-Seq ExpressionCucsat.G8872
SyntenyCucsat.G8872
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTTATTCCTTTCCTCCCTTACTCATTTCCTTCCCCAAAATGGATCTTTCCAGAAAAACCCGCGTATGGTCAATGTAAGTGCGTGTTGTAACGCAATAAGAAGGGAGCGTGAGATTCGAAGAGGGTTGGATAACGAGAAGTGGAGGGTCTGGTCGAGAGAGGAGCCAAGTCATTTGAACAAAAGCTTCACAAGGAAAAAGGGGTTATCTATTACAAAACCCAACCACCCAAGTACTGAGATTTCAATTTTCAGCTCTTCAAGATTCATTGCTTTTCGAAGTCGAAGGGAGGTATTCGCTTTGCGATTGATTTCTCATTCACTGCATGTTATGGTTTTTTCAATCTATTTATCTTCTGCTTATAATTTCATTTGATTATACCGGGTTTTAGACGATTGAAGAAGTTCCTATAACATGGCGTTGATTTGAGAGTTCTGGTTCTGATATTAAATGCCAAAAAGAGAGCGATTCTTGTGAAGAAGTGGGATTTTACTGAGTTTCTTTCACTCAATGGCGACTCTGCTCAATACAGTTTCTCCAATTACAAACCCGTCACCAGAAACCACAAGAAGAGGATGTGGGTTCTTTTCCCATATCCCAAATATCCAGAAGCTCTCACTTAACAAGGGATTTTCTAAAGTTTTAGCATCAACCCAGATTACCATTTCTCCAAAGGACACCATTTTCACACTTCCAAATTGGAAGATTGGGAAACTTGATCAAAAGAGTAAAGAACTTAGACTTAATGATGCTTTTTTTCATTTAGAGTTCATGGTTGAGAAGGGGCAAAAGCCTGATGTATTTCAAGCAACTCAGTTATTGTATGATCTCTGTAAGACATGTAAGATGAGAAAAGCTATTAAGGTAATGGAGATGATGATTGGGTCTGGAATCATTCCAGATGCAGCATCTTATACCTTTTTGGTTAGTTCTTTGTGTAGAAAAGGGAATGTTGGTTATGCAATGCAACTAGTGGACAAAATGGAGGAATATGGTTATCCTACTAACACTGCTACTTATAATTCACTTGTGAGAGGGCTTTGTATGCATGGAAACTTGACTCAGAGCTTGCAACTTTTAGACAGATTAATTCAGAAGGGGTTGGTTCCTAATGCTTATACATACTCTTTTTTGCTTGAAGCTGCATACAAGGAAAGAGGAGCTGATGAAGCAAGTAAGCTTTTGGATGAGATAATTGCAAAGGGTGGGAAACCTAACTTGGTTAGCTACAATGTTTTGTTGACTGGGTTGTGCAAAGAAGGTAGGACAGAGGATGCCATGCAGTTATTTAGGGAATTGCCTTCTAAGGGATTCAGTCCAAATGTTGTCAGTTATAATATCTTGCTAAGGAGTTTGTGCAATGAAGGGAGGTGGGAAGAGGCAAATGTGCTTCTAGCTGAAATGGATGGCGATGAACGATCCCCTTCAACTGTCACTTACAATATATTGATTGGTTCACTTACTCTTCATGGCAGAACAGAACATGCTCTTGAGGTTTTGGAAGAGATGATTAGGGCACGATTCAAGCCAACAGCTTCTAGCTACAATCCGATAATTGCTCGTCTTTGCAAAGATAGGAAAGTAGATCTTGTTGTAAAGTGTCTGGACCAAATGATGTATAGGCATTGCAATCCGAATGAAGGAACATACAATGCCATTGCTACACTTTGTGAAGAGGGTATGGTTCAAGAAGCATTCTCCATTATACAGAGTTTGGGCAACAAGCAACATTTCTCTACTCAAGAATTCTATAAAATTGTTATTACCAGCCTGTGTCGTAAAGGAAACACATATCCAGCATTCCAGCTTCTCTATGAAATGACAAAGTATGGGTTTACACCCGATTCTTTTACCTATTCGTCTTTGATCCGAGGGTTATGCATGGAGGGTATGTTGAATGAGGCAATTGAAATATTCAGTGTAATGGAGGAAAATATCAAGCTTGATACTGAGAATTACAATTCACTCATTCTTGGTTGCTGCAAATCTCGAAGAACTGATTTGGCCTTGGACGTATTCGAAATAATGGTTGGTAAAGGTTATCTGGCCAATGAAACGACATACACCATTCTTGTGGAAGGTATCATCCATGAAAAAGAGATGGATCTAGCAACCGAAGTACTGAGAGAGTTGCAACTGAGGGATGTTATAAATCAAAGCACAGTGGAAAGACTTATAATGCAGTATGACTTAAATGAATTGCCATTGTGATAATTTCAGTTGACTTGCTACCAGCAATTGGAAACCTAGCAGACAGTTCATCATGAAGATCAAGTAATTGTTAGTATGACAAAGAGAAAAAAAAAAGTAAAGAAAAAGGTACTTCCACATCCGTCTCATCCCATATTTTGTTTGATCTTATTACTTTGTCTGACAACTGAAAGCTTGTGAATCTGACAAGAGGGTGCTGTTTTTTTTAGTTGCATTATTTACAACTGAGTACATGTTTTTTAGTTCACTAGGCTTCTTATATGTACATAAAATTACTCCATCCAGTTCTTTACTTTCTCTTTCTATTGAGTTTTTTTGCCCATCTGTGGCCAATTTCATTCTTACAAAAGTTTTGGTAGTTGAAAGGAAACCTTATGCCAATGTGTTCTGGTTCCCAATTCCTGTCTCTTTATTGCTTCACATTCATAGAGACGTTTTTATTTACTTCTCTAGACCTTGCCTTTAATGCCTGACGTTTTGAATTATGGTAAACAGTCAGATGAAAGTGAGGAAAGGGAAGAACCTAAGCTTGAGATCAATGCATTTTAATCTTGTAG

Coding sequence (CDS)

ATGGCGACTCTGCTCAATACAGTTTCTCCAATTACAAACCCGTCACCAGAAACCACAAGAAGAGGATGTGGGTTCTTTTCCCATATCCCAAATATCCAGAAGCTCTCACTTAACAAGGGATTTTCTAAAGTTTTAGCATCAACCCAGATTACCATTTCTCCAAAGGACACCATTTTCACACTTCCAAATTGGAAGATTGGGAAACTTGATCAAAAGAGTAAAGAACTTAGACTTAATGATGCTTTTTTTCATTTAGAGTTCATGGTTGAGAAGGGGCAAAAGCCTGATGTATTTCAAGCAACTCAGTTATTGTATGATCTCTGTAAGACATGTAAGATGAGAAAAGCTATTAAGGTAATGGAGATGATGATTGGGTCTGGAATCATTCCAGATGCAGCATCTTATACCTTTTTGGTTAGTTCTTTGTGTAGAAAAGGGAATGTTGGTTATGCAATGCAACTAGTGGACAAAATGGAGGAATATGGTTATCCTACTAACACTGCTACTTATAATTCACTTGTGAGAGGGCTTTGTATGCATGGAAACTTGACTCAGAGCTTGCAACTTTTAGACAGATTAATTCAGAAGGGGTTGGTTCCTAATGCTTATACATACTCTTTTTTGCTTGAAGCTGCATACAAGGAAAGAGGAGCTGATGAAGCAAGTAAGCTTTTGGATGAGATAATTGCAAAGGGTGGGAAACCTAACTTGGTTAGCTACAATGTTTTGTTGACTGGGTTGTGCAAAGAAGGTAGGACAGAGGATGCCATGCAGTTATTTAGGGAATTGCCTTCTAAGGGATTCAGTCCAAATGTTGTCAGTTATAATATCTTGCTAAGGAGTTTGTGCAATGAAGGGAGGTGGGAAGAGGCAAATGTGCTTCTAGCTGAAATGGATGGCGATGAACGATCCCCTTCAACTGTCACTTACAATATATTGATTGGTTCACTTACTCTTCATGGCAGAACAGAACATGCTCTTGAGGTTTTGGAAGAGATGATTAGGGCACGATTCAAGCCAACAGCTTCTAGCTACAATCCGATAATTGCTCGTCTTTGCAAAGATAGGAAAGTAGATCTTGTTGTAAAGTGTCTGGACCAAATGATGTATAGGCATTGCAATCCGAATGAAGGAACATACAATGCCATTGCTACACTTTGTGAAGAGGGTATGGTTCAAGAAGCATTCTCCATTATACAGAGTTTGGGCAACAAGCAACATTTCTCTACTCAAGAATTCTATAAAATTGTTATTACCAGCCTGTGTCGTAAAGGAAACACATATCCAGCATTCCAGCTTCTCTATGAAATGACAAAGTATGGGTTTACACCCGATTCTTTTACCTATTCGTCTTTGATCCGAGGGTTATGCATGGAGGGTATGTTGAATGAGGCAATTGAAATATTCAGTGTAATGGAGGAAAATATCAAGCTTGATACTGAGAATTACAATTCACTCATTCTTGGTTGCTGCAAATCTCGAAGAACTGATTTGGCCTTGGACGTATTCGAAATAATGGTTGGTAAAGGTTATCTGGCCAATGAAACGACATACACCATTCTTGTGGAAGGTATCATCCATGAAAAAGAGATGGATCTAGCAACCGAAGTACTGAGAGAGTTGCAACTGAGGGATGTTATAAATCAAAGCACAGTGGAAAGACTTATAATGCAGTATGACTTAAATGAATTGCCATTGTGA

Protein sequence

MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFTLPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLIMQYDLNELPL
Homology
BLAST of Cucsat.G8872 vs. ExPASy Swiss-Prot
Match: A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)

HSP 1 Score: 738.8 bits (1906), Expect = 4.6e-212
Identity = 374/577 (64.82%), Postives = 463/577 (80.24%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPN--IQKLSLNKGFSKVLASTQITISPKDTI 60
           M+TLLN+V  + +P   + R+  GF SHIP+  +   S++KG ++VLASTQIT+SPKD+ 
Sbjct: 1   MSTLLNSVLSMASPE-SSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 60

Query: 61  FTL------PNWKIGKL--DQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKT 120
           FT+      P+   G    D +S E  L+D+F HLE +V  G KP+V  +TQLLYDLCK 
Sbjct: 61  FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 120

Query: 121 CKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATY 180
            +++KAI+V+E+M+ SGIIPDA++YT+LV+ LC++GNVGYAMQLV+KME++GYP+NT TY
Sbjct: 121 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 180

Query: 181 NSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIA 240
           N+LVRGLCM G+L QSLQ ++RL+QKGL PNA+TYSFLLEAAYKERG DEA KLLDEII 
Sbjct: 181 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 240

Query: 241 KGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEE 300
           KGG+PNLVSYNVLLTG CKEGRT+DAM LFRELP+KGF  NVVSYNILLR LC +GRWEE
Sbjct: 241 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 300

Query: 301 ANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRA--RFKPTASSYNPI 360
           AN LLAEMDG +R+PS VTYNILI SL  HGRTE AL+VL+EM +   +F+ TA+SYNP+
Sbjct: 301 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 360

Query: 361 IARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCE-EGMVQEAFSIIQSLGNKQH 420
           IARLCK+ KVDLVVKCLD+M+YR C PNEGTYNAI +LCE    VQEAF IIQSL NKQ 
Sbjct: 361 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 420

Query: 421 FSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIE 480
             T +FYK VITSLCRKGNT+ AFQLLYEMT+ GF PD+ TYS+LIRGLC+EGM   A+E
Sbjct: 421 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 480

Query: 481 IFSVME--ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGI 540
           + S+ME  EN K   +N+N++ILG CK RRTDLA++VFE+MV K  + NETTY ILVEGI
Sbjct: 481 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 540

Query: 541 IHEKEMDLATEVLRELQLRDVINQSTVERLIMQYDLN 563
            HE E++LA EVL EL+LR VI Q+ V+R++MQ++L+
Sbjct: 541 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNLD 576

BLAST of Cucsat.G8872 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.7e-102
Identity = 192/489 (39.26%), Postives = 302/489 (61.76%), Query Frame = 0

Query: 69  LDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGI 128
           L Q  +   L + F  LE MV  G  PD+   T L+   C+  K RKA K++E++ GSG 
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 129 IPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQ 188
           +PD  +Y  ++S  C+ G +  A+ ++D+M       +  TYN+++R LC  G L Q+++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 228

Query: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLC 248
           +LDR++Q+   P+  TY+ L+EA  ++ G   A KLLDE+  +G  P++V+YNVL+ G+C
Sbjct: 229 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 288

Query: 249 KEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTV 308
           KEGR ++A++   ++PS G  PNV+++NI+LRS+C+ GRW +A  LLA+M     SPS V
Sbjct: 289 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 348

Query: 309 TYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQM 368
           T+NILI  L   G    A+++LE+M +   +P + SYNP++   CK++K+D  ++ L++M
Sbjct: 349 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 408

Query: 369 MYRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNT 428
           + R C P+  TYN + T LC++G V++A  I+  L +K        Y  VI  L + G T
Sbjct: 409 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 468

Query: 429 YPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSL 488
             A +LL EM      PD+ TYSSL+ GL  EG ++EAI+ F   E   I+ +   +NS+
Sbjct: 469 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 528

Query: 489 ILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV 548
           +LG CKSR+TD A+D    M+ +G   NET+YTIL+EG+ +E     A E+L EL  + +
Sbjct: 529 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 588

Query: 549 INQSTVERL 556
           + +S+ E++
Sbjct: 589 MKKSSAEQV 594

BLAST of Cucsat.G8872 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.4e-88
Identity = 174/479 (36.33%), Postives = 273/479 (56.99%), Query Frame = 0

Query: 85  LEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCR 144
           LE MV KG  PDV   T+L+        + KA++VME++   G  PD  +Y  L++  C+
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCK 171

Query: 145 KGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYT 204
              +  A +++D+M    +  +T TYN ++  LC  G L  +L++L++L+     P   T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231

Query: 205 YSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELP 264
           Y+ L+EA   E G DEA KL+DE++++G KP++ +YN ++ G+CKEG  + A ++ R L 
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291

Query: 265 SKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTE 324
            KG  P+V+SYNILLR+L N+G+WEE   L+ +M  ++  P+ VTY+ILI +L   G+ E
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 351

Query: 325 HALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAI- 384
            A+ +L+ M      P A SY+P+IA  C++ ++D+ ++ L+ M+   C P+   YN + 
Sbjct: 352 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 411

Query: 385 ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFT 444
           ATLC+ G   +A  I   LG          Y  + ++L   G+   A  ++ EM   G  
Sbjct: 412 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 471

Query: 445 PDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTDLALDV 504
           PD  TY+S+I  LC EGM++EA E+   M           YN ++LG CK+ R + A++V
Sbjct: 472 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 531

Query: 505 FEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLIMQYDL 562
            E MVG G   NETTYT+L+EGI        A E+  +L   D I++ + +RL   + L
Sbjct: 532 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589

BLAST of Cucsat.G8872 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.9e-65
Identity = 135/454 (29.74%), Postives = 240/454 (52.86%), Query Frame = 0

Query: 91  KGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGY 150
           KG   +++  + ++   C+  K+  A   M  +I  G  P+  +++ L++ LC +G V  
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176

Query: 151 AMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLE 210
           A++LVD+M E G+  +  T N+LV GLC+ G   +++ L+D++++ G  PNA TY  +L 
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236

Query: 211 AAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSP 270
              K      A +LL ++  +  K + V Y++++ GLCK G  ++A  LF E+  KG + 
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296

Query: 271 NVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVL 330
           N+++YNIL+   CN GRW++   LL +M   + +P+ VT+++LI S    G+   A E+ 
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356

Query: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-LCEE 390
           +EMI     P   +Y  +I   CK+  +D   + +D M+ + C+PN  T+N +    C+ 
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416

Query: 391 GMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 450
             + +   + + +  +   +    Y  +I   C  G    A +L  EM      P+  TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476

Query: 451 SSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSRRTDLALDVFEIMVG 510
             L+ GLC  G   +A+EIF  +E++ ++LD   YN +I G C + + D A D+F  +  
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536

Query: 511 KGYLANETTYTILVEGIIHEKEMDLATEVLRELQ 543
           KG      TY I++ G+  +  +  A  + R+++
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570

BLAST of Cucsat.G8872 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.5e-65
Identity = 130/456 (28.51%), Postives = 241/456 (52.85%), Query Frame = 0

Query: 88  MVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGN 147
           M  KG    ++  + ++   C+  K+  A   M  ++  G  PD   +  L++ LC +  
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173

Query: 148 VGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSF 207
           V  A++LVD+M E G+     T N+LV GLC++G ++ ++ L+DR+++ G  PN  TY  
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 208 LLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKG 267
           +L    K      A +LL ++  +  K + V Y++++ GLCK+G  ++A  LF E+  KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 268 FSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHAL 327
           F  ++++YN L+   CN GRW++   LL +M   + SP+ VT+++LI S    G+   A 
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 328 EVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIAT-L 387
           ++L+EM++    P   +YN +I   CK+ +++  ++ +D M+ + C+P+  T+N +    
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 388 CEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDS 447
           C+   + +   + + +  +   +    Y  ++   C+ G    A +L  EM      PD 
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473

Query: 448 FTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLDTENYNSLILGCCKSRRTDLALDVFEI 507
            +Y  L+ GLC  G L +A+EIF  +E++ ++LD   Y  +I G C + + D A D+F  
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533

Query: 508 MVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 542
           +  KG   +   Y I++  +  +  +  A  + R++
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569

BLAST of Cucsat.G8872 vs. NCBI nr
Match: XP_011653982.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis sativus] >KGN54942.1 hypothetical protein Csa_012601 [Cucumis sativus])

HSP 1 Score: 1129 bits (2921), Expect = 0.0
Identity = 565/566 (99.82%), Postives = 566/566 (100.00%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
           MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
           LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM
Sbjct: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120

Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
           EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180

Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
           GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240

Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
           NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300

Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
           DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360

Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
           VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420

Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
           LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480

Query: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
           ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540

Query: 541 LQLRDVINQSTVERLIMQYDLNELPL 566
           LQLRDVINQSTVERL+MQYDLNELPL
Sbjct: 541 LQLRDVINQSTVERLVMQYDLNELPL 566

BLAST of Cucsat.G8872 vs. NCBI nr
Match: XP_008444287.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis melo] >ADN33755.1 pentatricopeptide repeat-containing protein [Cucumis melo subsp. melo] >KAA0052323.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK01883.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1085 bits (2805), Expect = 0.0
Identity = 541/566 (95.58%), Postives = 554/566 (97.88%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
           MATLLNTVSPITN SPETTRRGCGFFSHIPN+QKLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1   MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
           LPNWK GK++QKSKELRL DAFFHLEFMVEKGQKPDVFQATQLLYDLCK CKMRKAIKVM
Sbjct: 61  LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120

Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
           EMMIGSGIIPDA+SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180

Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
           GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240

Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
           NVLLTGLCKEGRTEDA++LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300

Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
           DERSPSTVTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360

Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
           VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420

Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
           LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN K DT
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDT 480

Query: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
           ENYNSLILGCCKSRRTDLALDVFEIMVGKGYL NETTYTILVEGIIHEKEMDLAT+VLRE
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRE 540

Query: 541 LQLRDVINQSTVERLIMQYDLNELPL 566
           LQLRDVI+QST+ERL+MQYDLNELPL
Sbjct: 541 LQLRDVISQSTLERLVMQYDLNELPL 566

BLAST of Cucsat.G8872 vs. NCBI nr
Match: XP_038899825.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Benincasa hispida])

HSP 1 Score: 1067 bits (2760), Expect = 0.0
Identity = 535/567 (94.36%), Postives = 550/567 (97.00%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
           MATLLNTVSPITNP PETTRRGCGFFSHIPN+ KLSL+KGFSKVLASTQITISPKDTIFT
Sbjct: 1   MATLLNTVSPITNPLPETTRRGCGFFSHIPNLHKLSLSKGFSKVLASTQITISPKDTIFT 60

Query: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
           LPNW+  K DQKS+ELRLNDAFFHLEF+VEKGQKPDVFQATQLLYDLCK CKMRKAIKVM
Sbjct: 61  LPNWRTAKGDQKSRELRLNDAFFHLEFLVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120

Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
           EMMIGSGIIPDA+SYTFLVSSLC+KGNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180

Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
           GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240

Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
           NVLLTGLCKEGRTEDA+QLFRELPSKGFSPNVVSYNILLRSLC EGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300

Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
           DERSPS VTYNILIGSLTL GRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DERSPSIVTYNILIGSLTLSGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360

Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
           VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420

Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLD 480
           LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEEN  K D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480

Query: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
           TENYNSLILGCCKSRRTDLAL+VFEIMV KGYL NETTYTILVEGI+HEKE+DLAT+VLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALEVFEIMVDKGYLPNETTYTILVEGIVHEKEIDLATKVLR 540

Query: 541 ELQLRDVINQSTVERLIMQYDLNELPL 566
           ELQLRDVI+QSTVERL+MQYDLNELPL
Sbjct: 541 ELQLRDVISQSTVERLVMQYDLNELPL 567

BLAST of Cucsat.G8872 vs. NCBI nr
Match: XP_022141778.1 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Momordica charantia])

HSP 1 Score: 1037 bits (2682), Expect = 0.0
Identity = 515/567 (90.83%), Postives = 543/567 (95.77%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
           MATLLNTVSPI NPSPET+RRGCGFFSHIPN+ KLSLNKGFSKVLAST ITISPKDTIFT
Sbjct: 1   MATLLNTVSPIANPSPETSRRGCGFFSHIPNLHKLSLNKGFSKVLASTHITISPKDTIFT 60

Query: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
           LPNW+ GK+DQKS++LRLNDAF HLEFMV KGQKPDVFQATQLLYDLCK  KMRKAIKVM
Sbjct: 61  LPNWRTGKVDQKSRDLRLNDAFLHLEFMVRKGQKPDVFQATQLLYDLCKASKMRKAIKVM 120

Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
           EMMIGSGIIPDA+SYTFLVS LC++GNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSCLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180

Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
           GNL+QSLQLLDRLI KGLVPNAYTYSFLLEAAYKERGADEA KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLSQSLQLLDRLIHKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240

Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
           NVLLTGLCKEGRTEDA+QLFRELPSKGFSPNVVS NILLRSLC EGRWEEAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSCNILLRSLCYEGRWEEANELLAEMDG 300

Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
           D+R+PS VTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DDRAPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360

Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
           VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGN+Q  STQEFYK+V+TS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNRQQSSTQEFYKMVVTS 420

Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENI-KLD 480
           LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEEN  K D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENCYKPD 480

Query: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
           TENYN+LILGCCKS+RTDLAL+VFE+MV KGYL NETTYTILVEGIIHEKE+DLA +VL+
Sbjct: 481 TENYNALILGCCKSQRTDLALEVFEVMVDKGYLPNETTYTILVEGIIHEKEIDLAAKVLK 540

Query: 541 ELQLRDVINQSTVERLIMQYDLNELPL 566
           ELQLRDVI+QSTV+RL+MQYDLN+LPL
Sbjct: 541 ELQLRDVISQSTVDRLVMQYDLNDLPL 567

BLAST of Cucsat.G8872 vs. NCBI nr
Match: KAG6607968.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037481.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1021 bits (2640), Expect = 0.0
Identity = 506/567 (89.24%), Postives = 539/567 (95.06%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
           MATLLNTVSPITNPSPETTRRG GFFSHIPN+ KLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1   MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60

Query: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
           LPNW+IGK DQK++E RLNDAF +LE++V KGQKPDVFQATQLLYDLCK  K+R+AIKVM
Sbjct: 61  LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120

Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
           EMMIGSGIIPDA+SYTFLVSSLC++GNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180

Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
           GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240

Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
           NVLLTGLCKEGRT+DA+QLFRELPSKGF+PNVVSYNILLRSLC EGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300

Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
           D+R+PS VTYN LIGSL  HGRTEHALEVLEEMIRARFKPTASSYNPIIARLC+D+KVDL
Sbjct: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360

Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
           VVKCLDQM+YRHCNPNEGTYNAIATLCE GMVQEAFSI+QSLGNKQH+STQEFYK VITS
Sbjct: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420

Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-IKLD 480
           LCRKGNTY AFQLLYEMTKYGFTPDSF YSSLIRGLCMEGML+EAIEIFSVMEEN  K D
Sbjct: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480

Query: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
           TENYNSLI GCCKSRRTDLAL+VFE MV KGYL NETTYT LVEGI+HEK++DLAT+VLR
Sbjct: 481 TENYNSLIFGCCKSRRTDLALEVFETMVNKGYLPNETTYTTLVEGIVHEKQIDLATKVLR 540

Query: 541 ELQLRDVINQSTVERLIMQYDLNELPL 566
           ELQL+DVI+QSTVERL+MQYDLNELPL
Sbjct: 541 ELQLKDVISQSTVERLVMQYDLNELPL 567

BLAST of Cucsat.G8872 vs. ExPASy TrEMBL
Match: A0A0A0L2W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G613170 PE=4 SV=1)

HSP 1 Score: 1129 bits (2921), Expect = 0.0
Identity = 565/566 (99.82%), Postives = 566/566 (100.00%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
           MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
           LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM
Sbjct: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120

Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
           EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180

Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
           GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240

Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
           NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300

Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
           DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360

Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
           VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420

Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
           LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480

Query: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
           ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540

Query: 541 LQLRDVINQSTVERLIMQYDLNELPL 566
           LQLRDVINQSTVERL+MQYDLNELPL
Sbjct: 541 LQLRDVINQSTVERLVMQYDLNELPL 566

BLAST of Cucsat.G8872 vs. ExPASy TrEMBL
Match: A0A5A7U8T1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001460 PE=4 SV=1)

HSP 1 Score: 1085 bits (2805), Expect = 0.0
Identity = 541/566 (95.58%), Postives = 554/566 (97.88%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
           MATLLNTVSPITN SPETTRRGCGFFSHIPN+QKLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1   MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
           LPNWK GK++QKSKELRL DAFFHLEFMVEKGQKPDVFQATQLLYDLCK CKMRKAIKVM
Sbjct: 61  LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120

Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
           EMMIGSGIIPDA+SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180

Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
           GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240

Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
           NVLLTGLCKEGRTEDA++LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300

Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
           DERSPSTVTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360

Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
           VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420

Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
           LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN K DT
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDT 480

Query: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
           ENYNSLILGCCKSRRTDLALDVFEIMVGKGYL NETTYTILVEGIIHEKEMDLAT+VLRE
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRE 540

Query: 541 LQLRDVINQSTVERLIMQYDLNELPL 566
           LQLRDVI+QST+ERL+MQYDLNELPL
Sbjct: 541 LQLRDVISQSTLERLVMQYDLNELPL 566

BLAST of Cucsat.G8872 vs. ExPASy TrEMBL
Match: E5GBB3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 1085 bits (2805), Expect = 0.0
Identity = 541/566 (95.58%), Postives = 554/566 (97.88%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
           MATLLNTVSPITN SPETTRRGCGFFSHIPN+QKLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1   MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
           LPNWK GK++QKSKELRL DAFFHLEFMVEKGQKPDVFQATQLLYDLCK CKMRKAIKVM
Sbjct: 61  LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120

Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
           EMMIGSGIIPDA+SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180

Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
           GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240

Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
           NVLLTGLCKEGRTEDA++LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300

Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
           DERSPSTVTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360

Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
           VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420

Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
           LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN K DT
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDT 480

Query: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
           ENYNSLILGCCKSRRTDLALDVFEIMVGKGYL NETTYTILVEGIIHEKEMDLAT+VLRE
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRE 540

Query: 541 LQLRDVINQSTVERLIMQYDLNELPL 566
           LQLRDVI+QST+ERL+MQYDLNELPL
Sbjct: 541 LQLRDVISQSTLERLVMQYDLNELPL 566

BLAST of Cucsat.G8872 vs. ExPASy TrEMBL
Match: A0A1S3BA04 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487653 PE=4 SV=1)

HSP 1 Score: 1085 bits (2805), Expect = 0.0
Identity = 541/566 (95.58%), Postives = 554/566 (97.88%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
           MATLLNTVSPITN SPETTRRGCGFFSHIPN+QKLSLNKGFSKVLASTQITISPKDTIFT
Sbjct: 1   MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
           LPNWK GK++QKSKELRL DAFFHLEFMVEKGQKPDVFQATQLLYDLCK CKMRKAIKVM
Sbjct: 61  LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120

Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
           EMMIGSGIIPDA+SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180

Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
           GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240

Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
           NVLLTGLCKEGRTEDA++LFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300

Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
           DERSPSTVTYNILIGSL LHGRTEHALEVLEEMIRARFKPTASSYNPIIA LCKD K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360

Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
           VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQH STQEFYKIVITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420

Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDT 480
           LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN K DT
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDT 480

Query: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRE 540
           ENYNSLILGCCKSRRTDLALDVFEIMVGKGYL NETTYTILVEGIIHEKEMDLAT+VLRE
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRE 540

Query: 541 LQLRDVINQSTVERLIMQYDLNELPL 566
           LQLRDVI+QST+ERL+MQYDLNELPL
Sbjct: 541 LQLRDVISQSTLERLVMQYDLNELPL 566

BLAST of Cucsat.G8872 vs. ExPASy TrEMBL
Match: A0A6J1CLJ3 (pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012056 PE=4 SV=1)

HSP 1 Score: 1037 bits (2682), Expect = 0.0
Identity = 515/567 (90.83%), Postives = 543/567 (95.77%), Query Frame = 0

Query: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
           MATLLNTVSPI NPSPET+RRGCGFFSHIPN+ KLSLNKGFSKVLAST ITISPKDTIFT
Sbjct: 1   MATLLNTVSPIANPSPETSRRGCGFFSHIPNLHKLSLNKGFSKVLASTHITISPKDTIFT 60

Query: 61  LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
           LPNW+ GK+DQKS++LRLNDAF HLEFMV KGQKPDVFQATQLLYDLCK  KMRKAIKVM
Sbjct: 61  LPNWRTGKVDQKSRDLRLNDAFLHLEFMVRKGQKPDVFQATQLLYDLCKASKMRKAIKVM 120

Query: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
           EMMIGSGIIPDA+SYTFLVS LC++GNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSCLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180

Query: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
           GNL+QSLQLLDRLI KGLVPNAYTYSFLLEAAYKERGADEA KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLSQSLQLLDRLIHKGLVPNAYTYSFLLEAAYKERGADEAIKLLDEIIAKGGKPNLVSY 240

Query: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
           NVLLTGLCKEGRTEDA+QLFRELPSKGFSPNVVS NILLRSLC EGRWEEAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAIQLFRELPSKGFSPNVVSCNILLRSLCYEGRWEEANELLAEMDG 300

Query: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
           D+R+PS VTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL
Sbjct: 301 DDRAPSIVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360

Query: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
           VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGN+Q  STQEFYK+V+TS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNRQQSSTQEFYKMVVTS 420

Query: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENI-KLD 480
           LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGML+EAIEIFSVMEEN  K D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLDEAIEIFSVMEENCYKPD 480

Query: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
           TENYN+LILGCCKS+RTDLAL+VFE+MV KGYL NETTYTILVEGIIHEKE+DLA +VL+
Sbjct: 481 TENYNALILGCCKSQRTDLALEVFEVMVDKGYLPNETTYTILVEGIIHEKEIDLAAKVLK 540

Query: 541 ELQLRDVINQSTVERLIMQYDLNELPL 566
           ELQLRDVI+QSTV+RL+MQYDLN+LPL
Sbjct: 541 ELQLRDVISQSTVDRLVMQYDLNDLPL 567

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A3KPF84.6e-21264.82Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... [more]
Q3EDF81.7e-10239.26Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9SR005.4e-8836.33Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
Q0WKV32.9e-6529.74Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
Q9LPX26.5e-6528.51Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
XP_011653982.10.099.82pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis sa... [more]
XP_008444287.10.095.58PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic ... [more]
XP_038899825.10.094.36pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Benincasa ... [more]
XP_022141778.10.090.83pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Momordica ... [more]
KAG6607968.10.089.24Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
A0A0A0L2W80.099.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G613170 PE=4 SV=1[more]
A0A5A7U8T10.095.58Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
E5GBB30.095.58Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=41267... [more]
A0A1S3BA040.095.58pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Cucumis ... [more]
A0A6J1CLJ30.090.83pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Momordic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 441..473
e-value: 3.0E-11
score: 42.9
coord: 304..333
e-value: 4.1E-7
score: 29.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 107..128
e-value: 0.66
score: 10.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 340..382
e-value: 6.1E-8
score: 32.8
coord: 130..178
e-value: 6.4E-10
score: 39.1
coord: 479..524
e-value: 1.5E-9
score: 37.9
coord: 235..284
e-value: 8.3E-17
score: 61.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 134..164
e-value: 9.3E-5
score: 20.4
coord: 107..132
e-value: 0.0016
score: 16.5
coord: 238..272
e-value: 2.5E-10
score: 37.9
coord: 483..514
e-value: 7.0E-6
score: 23.9
coord: 447..475
e-value: 2.4E-6
score: 25.4
coord: 344..377
e-value: 1.3E-4
score: 19.9
coord: 308..341
e-value: 1.8E-8
score: 32.1
coord: 273..305
e-value: 1.9E-6
score: 25.7
coord: 414..446
e-value: 0.0013
score: 16.8
coord: 169..202
e-value: 6.1E-7
score: 27.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 271..305
score: 11.41077
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 341..375
score: 9.13082
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 201..235
score: 9.262356
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 306..340
score: 11.728648
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 410..444
score: 9.492543
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 166..200
score: 12.265752
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 131..165
score: 10.676364
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 479..513
score: 11.202506
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 96..130
score: 8.516988
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 445..475
score: 11.092894
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 236..270
score: 14.008599
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 228..297
e-value: 1.1E-22
score: 82.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 298..386
e-value: 1.1E-19
score: 73.0
coord: 387..562
e-value: 7.5E-37
score: 129.3
coord: 64..216
e-value: 2.1E-32
score: 114.7
NoneNo IPR availablePANTHERPTHR45613:SF297PPR CONTAINING PLANT-LIKE PROTEINcoord: 1..564
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 1..564
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 72..269

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G8872.T5Cucsat.G8872.T5mRNA
Cucsat.G8872.T2Cucsat.G8872.T2mRNA
Cucsat.G8872.T1Cucsat.G8872.T1mRNA
Cucsat.G8872.T4Cucsat.G8872.T4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding