Cucsat.G8212 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8212
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Protein disulfide isomerase (PDI)-like protein 4
Location	ctg1557: 2937927 .. 2939327 (+)
RNA-Seq Expression	Cucsat.G8212
Synteny	Cucsat.G8212

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTATTGACTTAAAAGAGTATCATTACATTTTTCACATTCTTAATAATAATCCATAAAAGTTAATTTCTTTCTCACTAAGTTTGTGTTTCTCTTATTAATAACTGAGTTCTTTCATTTTCTTTTTCCATAACCCAACAATATAAACCTAAAGAATCATTTCTTTAATTATTATGGCTTTTGATGCTGTTCATGATCTCACTTCCCTCCTTTCCTCTGACAGGAGGGATTTTCTCATCCGTAACAATGGCGATCAGGTATATATCGTGCTATCTTTACAAAAAATGTTGTTATACACGTGATTATGATCGATCGATGACTTGTGTTTATTATTTTGGGTTATTTGTGTGTGTTATGAACAGGTGAAAATCAGTTCTTTAATTGGAAAGAGAGTGGGATTATATTTCTCAGCAGGATGGTGCCCTCCATGTCGACTTTTCACACCAAAGTTATCAGAATTTTACAAGGAACTGTTGGCTAATAAATCTAAAAATAATGACTTTGAAATTATCTTCATTTCTTCTGATAGAGATGCACTCTCATTCAAAGCTTACTTCTCAAAAATGCCATGGTTGGCCATTCCATTTGATGATTTAGAGACCCAAAAAAAGTTGAAAATATTGTTTCAACTTAGTTCAATTCCTTATCTTGTTGTTATTGATGGCAATGGCAAAGTTTCAAGTGCTGATGGTGTGAATTTAGTGAAGGAATTTGGAGTTGATGCTTACCCTTTTACTATTGATCGAAAAAAGCAACTTCTGGCTCAAAAAGAAGAGGCTAAGAAAAATAATCAAACCATTACTTCCGTTTTGGCTTCTGCTTCTCGCAATTATTTGGTTTCTAATGATGGAAAACAGGTATCTTTATATCTATGATCTTCTTCTTCTTTCTTGCTTTCACGGTTTAAACGGTGATCTTGTTGGTTTCGAGTTTTAAAATCACTTTTGTCATGTTTAATATCAAAAGAGCAAAGCCAAACGATGATTAAGTTGATAGTTGTTTGGTTTCATAAAATTTTAAAAATGAAGCTTAATCAATTATGATCATTACGTTCTACTTATAAATTTTTTTATCTACTTAGTCAAATTTTGAAAACTAAAAAGGAAAAATAGTCGTTTTGAAAATGGTTGATTTTGTTTTTAAAATGCCACTGAGAATTCTTGTGTTCCCTTATATCGTAAAGAGTTATGTGTAAATTCTAAATTTCACATAAAACTATATAACCATCTAATCATATTATTATACCAAACCTATAACCTAAATGTTGATATTTTGGAGTAATTTTGAACACCATGAACAGATTTCATCCATTTCAAAATTATTTTCCTAAACGCACCTTTCAAAATTAATTGTTACAACTTCAAATGGATATGTTAACCAAATTATTACAAACCTTACAAAATTTAGGAGCAAAAAGTTTTATTTTCAATGAAAGTAGAACTAAATCAAAATCGTTCTTAAAAATTGATAAAGAATAATTAGTACTTTATCGTAATCTATCACTACCTATATACTAACTAATAGCGATAACAATGTCCGATATTTTTTTGTATTTATAAATATTTTCAACTTTTGAATCTCAATGTCATTATACTATTTCTGTTGTACGTAGATTCCTGTCTCTGAGCTGGAAGGAAAATTGATAGGATTGTATTTCTCACTGCCTGGCCATGAACATTGTGATGCTTTTACACCAAAGTTAAGTGAAGTTTACAACAACTTGAAGAAGAAAAAAGAGAATTTTGAGATTGTGTTCGTCTCTTTAGAAGAAGAAGATGAAGATTTCTTCAATGAAGCATTCAAATCAATGCCATGGTTGGCATTGCCTTTTAAGGATGAGAAATGTCAAAAACTAAAGCTTTATTTTGATGTTGATGATATTCCTGCTCTTGTTATAACTGGCCAGGATGGGAGGACTTTAAACCCGAACGCAGTCGACCTGATCAAACAGCACGGAATTGATGCCTACCCTTTCACTCCCAAGAAACACGACGTAGTTCATGGCAAGGTAGAAGCTTCTTGTTGTGGTTGTGATGGGTCGAAGACGAGGGAGGAAACCAAAGATGAGAAGGTAGAAGTTTCTTGTGGCTCGATGGAGGAAGCCAAAGATGGGAAGGCAGAAGTTTCTTGTGGCTCGATGGAGGAAACCAAAGATGGGAAGGCAGAAGTTTCTTGTGGCTCGATGGAGGAAACCAAAGATGGGAAGGCAGAAGTTTCTTGTGGCTGCGATGGGTCGAAAAACGACGATGATGAAAAGATGGAGGAAACCAAAGATAAGATGGTAGAAGTTTCTTGTGGCTGCGATGGGTCGTCGAAAAATGACGATGACGAAAAGATGGAGGAAACCTGCAAAGATGGGAAGGTAGAAGTTTCTTGTTGTGGCTGTGATGAATCGAAAAACGATGGTGACCAAAAGATGGAGGAAACCAAGGAGGAGATCAAAGAAGGGTGTGGGTGCAAAGGATAAATAGCATATTCATTAACACAGCAAAGAATATGGAAGTTTATGAGTACACACATATACACACCCATAAGACTTTTATATAATCTGCTTCATTTGCTGCCTTTTTTCTTAAGACTTTGTTGTTTGAAATTGAATAAATCAAAGGAGGCTTGTAGTTTTAAGCATATATTTCAAGACATTTTTTGGTTTAGTTGTTCTAATTTGATGGCTTGAGCTATAACTCTCTTAGCTTGTATGTGATTTCTATGGTTAAAATGTTATTCTCTATAATATTTGTGAGTGTTATTAGTTTGTTTCTTACCTTACATT

Coding sequence (CDS)

ATGGCTTTTGATGCTGTTCATGATCTCACTTCCCTCCTTTCCTCTGACAGGAGGGATTTTCTCATCCGTAACAATGGCGATCAGGTGAAAATCAGTTCTTTAATTGGAAAGAGAGTGGGATTATATTTCTCAGCAGGATGGTGCCCTCCATGTCGACTTTTCACACCAAAGTTATCAGAATTTTACAAGGAACTGTTGGCTAATAAATCTAAAAATAATGACTTTGAAATTATCTTCATTTCTTCTGATAGAGATGCACTCTCATTCAAAGCTTACTTCTCAAAAATGCCATGGTTGGCCATTCCATTTGATGATTTAGAGACCCAAAAAAAGTTGAAAATATTGTTTCAACTTAGTTCAATTCCTTATCTTGTTGTTATTGATGGCAATGGCAAAGTTTCAAGTGCTGATGGTGTGAATTTAGTGAAGGAATTTGGAGTTGATGCTTACCCTTTTACTATTGATCGAAAAAAGCAACTTCTGGCTCAAAAAGAAGAGGCTAAGAAAAATAATCAAACCATTACTTCCGTTTTGGCTTCTGCTTCTCGCAATTATTTGGTTTCTAATGATGGAAAACAGATTCCTGTCTCTGAGCTGGAAGGAAAATTGATAGGATTGTATTTCTCACTGCCTGGCCATGAACATTGTGATGCTTTTACACCAAAGTTAAGTGAAGTTTACAACAACTTGAAGAAGAAAAAAGAGAATTTTGAGATTGTGTTCGTCTCTTTAGAAGAAGAAGATGAAGATTTCTTCAATGAAGCATTCAAATCAATGCCATGGTTGGCATTGCCTTTTAAGGATGAGAAATGTCAAAAACTAAAGCTTTATTTTGATGTTGATGATATTCCTGCTCTTGTTATAACTGGCCAGGATGGGAGGACTTTAAACCCGAACGCAGTCGACCTGATCAAACAGCACGGAATTGATGCCTACCCTTTCACTCCCAAGAAACACGACGTAGTTCATGGCAAGGTAGAAGCTTCTTGTTGTGGTTGTGATGGGTCGAAGACGAGGGAGGAAACCAAAGATGAGAAGGTAGAAGTTTCTTGTGGCTCGATGGAGGAAGCCAAAGATGGGAAGGCAGAAGTTTCTTGTGGCTCGATGGAGGAAACCAAAGATGGGAAGGCAGAAGTTTCTTGTGGCTCGATGGAGGAAACCAAAGATGGGAAGGCAGAAGTTTCTTGTGGCTGCGATGGGTCGAAAAACGACGATGATGAAAAGATGGAGGAAACCAAAGATAAGATGGTAGAAGTTTCTTGTGGCTGCGATGGGTCGTCGAAAAATGACGATGACGAAAAGATGGAGGAAACCTGCAAAGATGGGAAGGTAGAAGTTTCTTGTTGTGGCTGTGATGAATCGAAAAACGATGGTGACCAAAAGATGGAGGAAACCAAGGAGGAGATCAAAGAAGGGTGTGGGTGCAAAGGATAA

Protein sequence

MAFDAVHDLTSLLSSDRRDFLIRNNGDQVKISSLIGKRVGLYFSAGWCPPCRLFTPKLSEFYKELLANKSKNNDFEIIFISSDRDALSFKAYFSKMPWLAIPFDDLETQKKLKILFQLSSIPYLVVIDGNGKVSSADGVNLVKEFGVDAYPFTIDRKKQLLAQKEEAKKNNQTITSVLASASRNYLVSNDGKQIPVSELEGKLIGLYFSLPGHEHCDAFTPKLSEVYNNLKKKKENFEIVFVSLEEEDEDFFNEAFKSMPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKKHDVVHGKVEASCCGCDGSKTREETKDEKVEVSCGSMEEAKDGKAEVSCGSMEETKDGKAEVSCGSMEETKDGKAEVSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSSKNDDDEKMEETCKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG

Homology

[Close]

BLAST of Cucsat.G8212 vs. ExPASy Swiss-Prot
Match: Q7Y0E8 (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.5e-13
Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDA---YPFT 60
           MPWLA+P +D+  +KL  YF++  +P LV+ G DG+TLN N  D+I +HG DA   +PFT
Sbjct: 253 MPWLAIPQEDKMGEKLARYFELRGLPTLVLIGPDGKTLNNNVADIIDEHGQDAWEGFPFT 312

Query: 61  PKKHDVVHGKVEA 71
            +K +++  K +A
Sbjct: 313 AEKMEILAEKAKA 325

[Close]

BLAST of Cucsat.G8212 vs. ExPASy Swiss-Prot
Match: Q7Y0F2 (Probable nucleoredoxin 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405900 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.5e-13
Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDA---YPFT 60
           MPWLA+P  D+ C+KL  YF++  +P LV+ G DG+TLN +  D+I +HG DA   +PF+
Sbjct: 260 MPWLAIPQGDKMCEKLARYFELSGLPMLVLIGPDGKTLNDDIADIIDEHGPDAWEGFPFS 319

Query: 61  PKKHDVVHGKVEA 71
            +K +++  K +A
Sbjct: 320 AEKLEILAEKAKA 332

[Close]

BLAST of Cucsat.G8212 vs. ExPASy Swiss-Prot
Match: O80763 (Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-11
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 2   PWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK- 61
           PWLALPF D+   KL  +F +  +P LVI G DG+T + N  + I  +G+ AYPFTP+K 
Sbjct: 261 PWLALPFNDKSGSKLARHFMLSTLPTLVILGPDGKTRHSNVAEAIDDYGVLAYPFTPEKF 320

Query: 62  ---HDVVHGKVEA 71
               ++   KVEA
Sbjct: 321 QELKELEKAKVEA 333

[Close]

BLAST of Cucsat.G8212 vs. ExPASy Swiss-Prot
Match: Q7XPE8 (Probable nucleoredoxin 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0608600 PE=3 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-09
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALV---ITGQDGRTLNPNAVDLIKQHGIDAYPFT 60
           MPWLALPF     QKL + FD++ IPAL+    T   G  +  +AV L++++G+DAYPF 
Sbjct: 98  MPWLALPFDTGLRQKLCVQFDIEHIPALIPLSTTLSHGFRVEEDAVKLVEEYGVDAYPFG 157

Query: 61  PKKHDVVHGKVEA 71
            K+   + G  +A
Sbjct: 158 AKRRSELEGMDDA 170

[Close]

BLAST of Cucsat.G8212 vs. ExPASy Swiss-Prot
Match: Q8VZQ0 (Probable nucleoredoxin 3 OS=Arabidopsis thaliana OX=3702 GN=At4g31240 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.1e-08
Identity = 33/90 (36.67%), Postives = 51/90 (56.67%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLA+P++D   Q L   F+V  IPALVI G + +T+  NA +++  +G  ++PFT  +
Sbjct: 261 MPWLAIPYEDRTRQDLCRIFNVKLIPALVIIGPEEKTVTTNAREMVSLYGSRSFPFTESR 320

Query: 61  HDVVHGKVEASCCGCDGSKTREETKDEKVE 91
             +V  K   +C   +G     + KD K E
Sbjct: 321 --IVELK---ACLKKEGDSLPRKVKDNKHE 345

[Close]

BLAST of Cucsat.G8212 vs. NCBI nr
Match: KAE8648980.1 (hypothetical protein Csa_009075 [Cucumis sativus])

HSP 1 Score: 375 bits (964), Expect = 5.90e-127
Identity = 189/219 (86.30%), Postives = 189/219 (86.30%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK
Sbjct: 259 MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 318

Query: 61  HDVVHGKVEASCCGCDGSKTREETKDEKVEVSCGSMEEAKDGKAEVSCG----------- 120
           HDVVHGKVEASCCGCDGSKTREETKDEKVEVSCGSMEEAKDGKAEVSCG           
Sbjct: 319 HDVVHGKVEASCCGCDGSKTREETKDEKVEVSCGSMEEAKDGKAEVSCGSMEETKDGKAE 378

Query: 121 -------------------CDGSKNDDDEKMEETKDKMVEVSCGCDGSSKNDDDEKMEET 180
                              CDGSKNDDDEKMEETKDKMVEVSCGCDGSSKNDDDEKMEET
Sbjct: 379 VSCGSMEETKDGKAEVSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSSKNDDDEKMEET 438

Query: 181 CKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 189
           CKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG
Sbjct: 439 CKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 477

[Close]

BLAST of Cucsat.G8212 vs. NCBI nr
Match: XP_004141531.3 (probable nucleoredoxin 1-2 [Cucumis sativus])

HSP 1 Score: 375 bits (964), Expect = 5.88e-123
Identity = 189/219 (86.30%), Postives = 189/219 (86.30%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK
Sbjct: 585 MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 644

Query: 61  HDVVHGKVEASCCGCDGSKTREETKDEKVEVSCGSMEEAKDGKAEVSCG----------- 120
           HDVVHGKVEASCCGCDGSKTREETKDEKVEVSCGSMEEAKDGKAEVSCG           
Sbjct: 645 HDVVHGKVEASCCGCDGSKTREETKDEKVEVSCGSMEEAKDGKAEVSCGSMEETKDGKAE 704

Query: 121 -------------------CDGSKNDDDEKMEETKDKMVEVSCGCDGSSKNDDDEKMEET 180
                              CDGSKNDDDEKMEETKDKMVEVSCGCDGSSKNDDDEKMEET
Sbjct: 705 VSCGSMEETKDGKAEVSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSSKNDDDEKMEET 764

Query: 181 CKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 189
           CKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG
Sbjct: 765 CKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 803

[Close]

BLAST of Cucsat.G8212 vs. NCBI nr
Match: AAU04768.1 (protein disulfide isomerase (PDI)-like protein 4 [Cucumis melo])

HSP 1 Score: 316 bits (809), Expect = 2.19e-103
Identity = 172/230 (74.78%), Postives = 176/230 (76.52%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLALPFKDEKCQKLKLYFDV +IPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK
Sbjct: 259 MPWLALPFKDEKCQKLKLYFDVGEIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 318

Query: 61  HDVVHGKVEASC------------------------CGCDGS------KTREETKDEKVE 120
           HDV+HGKVEASC                        CGCDGS      KT EETKD  VE
Sbjct: 319 HDVLHGKVEASCGCDGSKNDDDKTMEETKDEKVEDSCGCDGSSKKDDDKTMEETKDGNVE 378

Query: 121 VSCG-----------SMEEAKDGKAEVSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSS 180
           VSCG           +MEE KD K EVSCG DGSKND DEKMEETKDK VEVSCGCDGS 
Sbjct: 379 VSCGCDGSSKRDDDKTMEETKDRKVEVSCGYDGSKNDGDEKMEETKDKTVEVSCGCDGS- 438

Query: 181 KNDDDEKMEETCKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 189
           KND+DEKMEET KDGKVEVSCCGCDESKND DQKMEETKEEIKEGCGCKG
Sbjct: 439 KNDEDEKMEET-KDGKVEVSCCGCDESKNDDDQKMEETKEEIKEGCGCKG 486

[Close]

BLAST of Cucsat.G8212 vs. NCBI nr
Match: TYK00515.1 (protein disulfide isomerase (PDI)-like protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 316 bits (809), Expect = 2.19e-103
Identity = 172/230 (74.78%), Postives = 176/230 (76.52%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLALPFKDEKCQKLKLYFDV +IPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK
Sbjct: 259 MPWLALPFKDEKCQKLKLYFDVGEIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 318

Query: 61  HDVVHGKVEASC------------------------CGCDGS------KTREETKDEKVE 120
           HDV+HGKVEASC                        CGCDGS      KT EETKD  VE
Sbjct: 319 HDVLHGKVEASCGCDGSKNDNDKTMEETKDEKVEDSCGCDGSLKKDDDKTMEETKDGNVE 378

Query: 121 VSCG-----------SMEEAKDGKAEVSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSS 180
           VSCG           +MEE KD K EVSCG DGSKND DEKMEETKDK VEVSCGCDGS 
Sbjct: 379 VSCGCDGSSKRDDDKTMEETKDRKVEVSCGYDGSKNDGDEKMEETKDKTVEVSCGCDGS- 438

Query: 181 KNDDDEKMEETCKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 189
           KND+DEKMEET KDGKVEVSCCGCDESKND DQKMEETKEEIKEGCGCKG
Sbjct: 439 KNDEDEKMEET-KDGKVEVSCCGCDESKNDDDQKMEETKEEIKEGCGCKG 486

[Close]

BLAST of Cucsat.G8212 vs. NCBI nr
Match: AGH33853.1 (protein disulfide isomerase (PDI)-like protein 4 [Cucumis melo])

HSP 1 Score: 315 bits (806), Expect = 6.39e-103
Identity = 172/230 (74.78%), Postives = 175/230 (76.09%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLALPFKDEKCQKLKLYFDV +IPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK
Sbjct: 260 MPWLALPFKDEKCQKLKLYFDVGEIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 319

Query: 61  HDVVHGKVEASC------------------------CGCDGS------KTREETKDEKVE 120
           HDV+HGKVEASC                        CGCDGS      KT EETKD  VE
Sbjct: 320 HDVLHGKVEASCGCDGSKNDDDKTMEETKDEKVEDSCGCDGSSKKDDDKTMEETKDGNVE 379

Query: 121 VSCG-----------SMEEAKDGKAEVSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSS 180
           VSCG           +MEE KD K EVSCG DGSKND DEKMEETKDK VEVSCGCDGS 
Sbjct: 380 VSCGCDGSSKRDDDKTMEETKDRKVEVSCGYDGSKNDGDEKMEETKDKTVEVSCGCDGS- 439

Query: 181 KNDDDEKMEETCKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 189
           KNDDDEKMEET KDGKVEVSCCGCDESKND DQKM ETKEEIKEGCGCKG
Sbjct: 440 KNDDDEKMEET-KDGKVEVSCCGCDESKNDDDQKMVETKEEIKEGCGCKG 487

[Close]

BLAST of Cucsat.G8212 vs. ExPASy TrEMBL
Match: A0A0A0KW15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647490 PE=4 SV=1)

HSP 1 Score: 381 bits (979), Expect = 9.42e-130
Identity = 189/204 (92.65%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK
Sbjct: 259 MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 318

Query: 61  HDVVHGKVEASCCGCDGSKTREETKDEKVEVSCGSMEEAKDGKAEVSCG----------- 120
           HDVVHGKVEASCCGCDGSKTREETKDEKVEVSCGSMEEAKDGKAEVSCG           
Sbjct: 319 HDVVHGKVEASCCGCDGSKTREETKDEKVEVSCGSMEEAKDGKAEVSCGSMEETKDGKAE 378

Query: 121 ----CDGSKNDDDEKMEETKDKMVEVSCGCDGSSKNDDDEKMEETCKDGKVEVSCCGCDE 180
               CDGSKNDDDEKMEETKDKMVEVSCGCDGSSKNDDDEKMEETCKDGKVEVSCCGCDE
Sbjct: 379 VSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSSKNDDDEKMEETCKDGKVEVSCCGCDE 438

Query: 181 SKNDGDQKMEETKEEIKEGCGCKG 189
           SKNDGDQKMEETKEEIKEGCGCKG
Sbjct: 439 SKNDGDQKMEETKEEIKEGCGCKG 462

[Close]

BLAST of Cucsat.G8212 vs. ExPASy TrEMBL
Match: A0A5D3BN43 (Protein disulfide isomerase (PDI)-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001250 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 1.06e-103
Identity = 172/230 (74.78%), Postives = 176/230 (76.52%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLALPFKDEKCQKLKLYFDV +IPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK
Sbjct: 259 MPWLALPFKDEKCQKLKLYFDVGEIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 318

Query: 61  HDVVHGKVEASC------------------------CGCDGS------KTREETKDEKVE 120
           HDV+HGKVEASC                        CGCDGS      KT EETKD  VE
Sbjct: 319 HDVLHGKVEASCGCDGSKNDNDKTMEETKDEKVEDSCGCDGSLKKDDDKTMEETKDGNVE 378

Query: 121 VSCG-----------SMEEAKDGKAEVSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSS 180
           VSCG           +MEE KD K EVSCG DGSKND DEKMEETKDK VEVSCGCDGS 
Sbjct: 379 VSCGCDGSSKRDDDKTMEETKDRKVEVSCGYDGSKNDGDEKMEETKDKTVEVSCGCDGS- 438

Query: 181 KNDDDEKMEETCKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 189
           KND+DEKMEET KDGKVEVSCCGCDESKND DQKMEETKEEIKEGCGCKG
Sbjct: 439 KNDEDEKMEET-KDGKVEVSCCGCDESKNDDDQKMEETKEEIKEGCGCKG 486

[Close]

BLAST of Cucsat.G8212 vs. ExPASy TrEMBL
Match: Q5DMW8 (Protein disulfide isomerase (PDI)-like protein 4 OS=Cucumis melo OX=3656 GN=PDI4 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 1.06e-103
Identity = 172/230 (74.78%), Postives = 176/230 (76.52%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLALPFKDEKCQKLKLYFDV +IPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK
Sbjct: 259 MPWLALPFKDEKCQKLKLYFDVGEIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 318

Query: 61  HDVVHGKVEASC------------------------CGCDGS------KTREETKDEKVE 120
           HDV+HGKVEASC                        CGCDGS      KT EETKD  VE
Sbjct: 319 HDVLHGKVEASCGCDGSKNDDDKTMEETKDEKVEDSCGCDGSSKKDDDKTMEETKDGNVE 378

Query: 121 VSCG-----------SMEEAKDGKAEVSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSS 180
           VSCG           +MEE KD K EVSCG DGSKND DEKMEETKDK VEVSCGCDGS 
Sbjct: 379 VSCGCDGSSKRDDDKTMEETKDRKVEVSCGYDGSKNDGDEKMEETKDKTVEVSCGCDGS- 438

Query: 181 KNDDDEKMEETCKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 189
           KND+DEKMEET KDGKVEVSCCGCDESKND DQKMEETKEEIKEGCGCKG
Sbjct: 439 KNDEDEKMEET-KDGKVEVSCCGCDESKNDDDQKMEETKEEIKEGCGCKG 486

[Close]

BLAST of Cucsat.G8212 vs. ExPASy TrEMBL
Match: M4QUW9 (Protein disulfide isomerase (PDI)-like protein 4 OS=Cucumis melo OX=3656 GN=PDI4 PE=4 SV=1)

HSP 1 Score: 315 bits (806), Expect = 3.10e-103
Identity = 172/230 (74.78%), Postives = 175/230 (76.09%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLALPFKDEKCQKLKLYFDV +IPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK
Sbjct: 260 MPWLALPFKDEKCQKLKLYFDVGEIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 319

Query: 61  HDVVHGKVEASC------------------------CGCDGS------KTREETKDEKVE 120
           HDV+HGKVEASC                        CGCDGS      KT EETKD  VE
Sbjct: 320 HDVLHGKVEASCGCDGSKNDDDKTMEETKDEKVEDSCGCDGSSKKDDDKTMEETKDGNVE 379

Query: 121 VSCG-----------SMEEAKDGKAEVSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSS 180
           VSCG           +MEE KD K EVSCG DGSKND DEKMEETKDK VEVSCGCDGS 
Sbjct: 380 VSCGCDGSSKRDDDKTMEETKDRKVEVSCGYDGSKNDGDEKMEETKDKTVEVSCGCDGS- 439

Query: 181 KNDDDEKMEETCKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 189
           KNDDDEKMEET KDGKVEVSCCGCDESKND DQKM ETKEEIKEGCGCKG
Sbjct: 440 KNDDDEKMEET-KDGKVEVSCCGCDESKNDDDQKMVETKEEIKEGCGCKG 487

[Close]

BLAST of Cucsat.G8212 vs. ExPASy TrEMBL
Match: A0A5A7T778 (Putative nucleoredoxin 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001300 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 4.35e-100
Identity = 172/230 (74.78%), Postives = 176/230 (76.52%), Query Frame = 0


Query: 1   MPWLALPFKDEKCQKLKLYFDVDDIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 60
           MPWLALPFKDEKCQKLKLYFDV +IPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK
Sbjct: 590 MPWLALPFKDEKCQKLKLYFDVGEIPALVITGQDGRTLNPNAVDLIKQHGIDAYPFTPKK 649

Query: 61  HDVVHGKVEASC------------------------CGCDGS------KTREETKDEKVE 120
           HDV+HGKVEASC                        CGCDGS      KT EETKD  VE
Sbjct: 650 HDVLHGKVEASCGCDGSKNDNDKTMEETKDEKVEDSCGCDGSLKKDDDKTMEETKDGNVE 709

Query: 121 VSCG-----------SMEEAKDGKAEVSCGCDGSKNDDDEKMEETKDKMVEVSCGCDGSS 180
           VSCG           +MEE KD K EVSCG DGSKND DEKMEETKDK VEVSCGCDGS 
Sbjct: 710 VSCGCDGSSKRDDDKTMEETKDRKVEVSCGYDGSKNDGDEKMEETKDKTVEVSCGCDGS- 769

Query: 181 KNDDDEKMEETCKDGKVEVSCCGCDESKNDGDQKMEETKEEIKEGCGCKG 189
           KND+DEKMEET KDGKVEVSCCGCDESKND DQKMEETKEEIKEGCGCKG
Sbjct: 770 KNDEDEKMEET-KDGKVEVSCCGCDESKNDDDQKMEETKEEIKEGCGCKG 817

The following BLAST results are available for this feature:

BLAST of Cucsat.G8212 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7Y0E8	9.5e-13	45.21	Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405...	[more]
Q7Y0F2	9.5e-13	43.84	Probable nucleoredoxin 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405...	[more]
O80763	3.1e-11	45.21	Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1	[more]
Q7XPE8	2.2e-09	42.47	Probable nucleoredoxin 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g060860...	[more]
Q8VZQ0	4.1e-08	36.67	Probable nucleoredoxin 3 OS=Arabidopsis thaliana OX=3702 GN=At4g31240 PE=2 SV=1	[more]

BLAST of Cucsat.G8212 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648980.1	5.90e-127	86.30	hypothetical protein Csa_009075 [Cucumis sativus]	[more]
XP_004141531.3	5.88e-123	86.30	probable nucleoredoxin 1-2 [Cucumis sativus]	[more]
AAU04768.1	2.19e-103	74.78	protein disulfide isomerase (PDI)-like protein 4 [Cucumis melo]	[more]
TYK00515.1	2.19e-103	74.78	protein disulfide isomerase (PDI)-like protein 4 [Cucumis melo var. makuwa]	[more]
AGH33853.1	6.39e-103	74.78	protein disulfide isomerase (PDI)-like protein 4 [Cucumis melo]	[more]

BLAST of Cucsat.G8212 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW15	9.42e-130	92.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647490 PE=4 SV=1	[more]
A0A5D3BN43	1.06e-103	74.78	Protein disulfide isomerase (PDI)-like protein 4 OS=Cucumis melo var. makuwa OX=...	[more]
Q5DMW8	1.06e-103	74.78	Protein disulfide isomerase (PDI)-like protein 4 OS=Cucumis melo OX=3656 GN=PDI4...	[more]
M4QUW9	3.10e-103	74.78	Protein disulfide isomerase (PDI)-like protein 4 OS=Cucumis melo OX=3656 GN=PDI4...	[more]
A0A5A7T778	4.35e-100	74.78	Putative nucleoredoxin 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 227..247
None	No IPR available	COILS	Coil	Coil	coord: 157..177
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 13..154 e-value: 6.8E-39 score: 134.9 coord: 177..315 e-value: 3.4E-31 score: 109.9
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 5..323
None	No IPR available	PANTHER	PTHR13871:SF95	NUCLEOREDOXIN 1-2-RELATED	coord: 5..323
None	No IPR available	CDD	cd03009	TryX_like_TryX_NRX	coord: 19..152 e-value: 3.51319E-65 score: 204.056
IPR012336	Thioredoxin-like fold	PFAM	PF13905	Thioredoxin_8	coord: 36..133 e-value: 5.7E-29 score: 100.2 coord: 201..294 e-value: 2.6E-24 score: 85.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..162 score: 11.55538
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 175..306 score: 8.987402
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 22..134
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 185..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8212.T1	Cucsat.G8212.T1	mRNA
Cucsat.G8212.T2	Cucsat.G8212.T2	mRNA
Cucsat.G8212.T5	Cucsat.G8212.T5	mRNA
Cucsat.G8212.T3	Cucsat.G8212.T3	mRNA
Cucsat.G8212.T6	Cucsat.G8212.T6	mRNA
Cucsat.G8212.T4	Cucsat.G8212.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016853	isomerase activity