Cucsat.G7989 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTGAACTTCCAAGAATTCGCCCATCCAACCAATACCCACTTCCATTGATTTGGTATATTTTTTTGTTTTAATTGTTAACCTTTGATTTATCATACTTTTGCCTAGCTTTATGAAGTTGTATGGGTTTCTATGTCTACCTTTCTGAAGTTTCCTTCGTCATTTTTCGATGCTAGATCAAATATCTGAAGGAAGATTGTTTTTTTTTTTTTCATGTATGGTTTAGCTTTACATCCCATGTACTTTGAATGGAGAATTAACTATGTCATTTTGAGGTTGATGGTGGAAAACAGACAACATAGGGCACCCATTTCTCCGTTTAACGACTGAAAGAAAACCTCTTCATGTTGTGGATTGTGAAGACATTATTAGTCAGTTTAATGGGAGTACTAGAGGTGGCACTTTGTCTATATCTAAGTTTAATTTTCTAAGAAAAGGTGGAATTGATGAATTTTCCAACTGTTTAGTGCAATATTGGATATCAGTAGTTGAAAGTATTTGAGTCCTTATGATTTATAATCTTGATCATGATAATAAGTTGCAAGGACTGTTCAAATTGTGATAGTTAACATTTTGTTACTTCATTGATAGTGAAGCTTAAAAAACTAGAAATCAACAGTGTTGTAGTTAACATTTTATTAATTCTTATTATGTGTATAGATCCTTTCATCAGATCTTTCAAGCTTTATAGTTTGTGGGTGAGATCTCTCTTCTTGTGCGTGCCTTTTAGATGCTTCTTTTGTTATCGTTAGTTCATGCATCATCTTTTGCCATATTGGTAAGTGTTCTTGAGATACAGCATATATGCTCTCTTCTCTATCTGAAATAATGAAATTCTCTTTGTTGGGTAGTTTGAATTATAAAAAAATGTGGTACAAACAGGTATTGAGTCTTGGAATTCTGGAGGCTGCTTAAATCTGAAATTTGTTTTTTGGCCAGGTGCACAATTCAAAAACCATGTCTTTAAATTTAGAGGTACCTCCTTCAAATGGTTGTGAGAAAGTTATATTATCTGAAGAACAGCATATGAAGGTATTTTTGACAGTTACAGCATTTTTTAGCCTCTTCATACCAGTGCTAACTGTCGATTGCTGCTAATCTTCTTGTGCGTGACTAAGAAGGTTGAAATGCTGCATTTTTCTAGTTGCTTAACTCTTACAGTTTTCCTTTATTTCATCCTACACAGATTTGTGAGGTGCGAAGGCTTTTAGGACCCTTGTCGGGTACGTCATCAATTTACTGTTCGGATCTATCCATTTTGAGATATCTAAGAGCAAGAAACTGGAATGTGAAGAAGGCAACTAAAATGCTGAAAGCAACTTTGAAGTGGAGGTCAGAATACAAACCCGAAGAGATTCAATGGGTACATTACTGCTTACTTTTGCCAAATCTTTCTGAAGTCATGCCCATAAGCTCAAAACGACTCGGTCTTATTCTTTCTTGTTAGCTACCTGGCTTTTTTTGTTTCAATACGAAGAGGAAGCTATTACTTAATTCAATTTCTGTTGTTTTCTGCTTTTTTATCCTTCTTTTGCCACATTTTTTTTTCAATTCAAAGGGTTCTATATGTTGTAATAGTTCTTGTTTGACAAGGTTTTAATTCTCTACAAGCTATGGTGTTATATGCATTCAATAGTTAGATCTTTATTGCAGGATGAGGTTGCTCATGAAGCTGAAACTGGGAAAGTTTATTGTGCGGACTGTAAGGACCGACATGGAAGAACAGTGATAGTCATGAGACCTTGTCGCCAGGTTTCATTTGCATTATGCAGTCCTAACAGAAATCTACTGGACATTTCTGAATTTTGGAAGTTCTTGTTGCTTGTAGCTATTTTAGAAATAAGTGCTGGGGATGGGGTAGTGAGATTGTCTGGCACATTGACTCTTATTAATGAAGATGTTTTTCATTAAGTGAATGAAATGTTTTGACTTATATATTTTAAATGGGATCTCTAATGAATAAGCAAACTTGGAATCCTTTATATTTAGCTTCCAAACAGCTAGCTTAACAAGTTCGTGTTTTCCGTCTCAACCACAGAACTCGAAGACTGTAAAAGGACAGATTAGATACTTGGTGTATTGCATGGAGAATGCTATTTTGAATCTTCCATCAAACCAGGAGAGTATGATCTGGCTGGTTGATTTCAAGGATTTTGACATGTCAAATATCTCATTAAAAGCAACAAAGGAGACTGCACATATTTTACAAGAACATTATCCCGAACGCCTCGGATTGGCAATTCTGTATAACGCGCCCAAGTTTTTTGAACCCTTCTGGATGGTATAATTTATTTGAAGAACTAACTTTATGGTTTCTTGTCATTCAAATATCTGAATTTACTGTACATCTCACTATGATTTGTGGCCCATAGGTGGGAGTAGTAGTAGTACACTGCCATTTCTGTTTTACTTGCTGCAATTATTTGTTGTTTACACTACTGGACAAACGTACTGTTCCATTTACAGGTTGCAAAGCCTTTCCTGGAGACAAAAACTGCCAACAAAGTGAAATTTGTTTACTCTGACGACGTAAACTCAAAGAGGATAATAGAGGATCTGTTCGATATGGACCAGCTGGAGTCTGCGTTTGGTGGAAACAATAATGTTGGTTTCAATATAACCAAATATGCTGAGATGATGAAAGAAGACGATAAACAGATGCGTTGTTCCTGGTCCGCGGTAAATCCTAATAGCCTAGCCTCGGAAAAAGCTCAGAGTAGCGGTCTAGTCGGTTCTCAAATCACTAACCGTTCTGAATCCTCAGAGAATGAGAGGACAGATGGTGATATTCATATAACTAGAAAAGCAGATGGCAACTGAGGCAGAATTCAAGTTAACTCATATAAGTTTGAGTCTGATTTTTTTTTCTTGGTGTTTGGCATTCTTGCTATGAACAAAACAAAGCGTTTTGTATTTCTTTTATTTAACAATTCCTTGTCCAATTTCTTGTGGACATGATTAGAGCAGGGGTGGGTTCTTGAAATTTGTCCATTATTATCTGTGTGAGTTGACAATGACATGAAGACTACCACCATACAATAATCTAAACATATTTGGTTCTGTTAATATTTTGTTAAAGTCAATAGTTTATTTCAGAAAAAGAAAATGAGATGATTATGAATTGAAAATGAAAAGAAATGACAAAAGTGTAA ATGGAGAATGCTATTTTGAATCTTCCATCAAACCAGGAGAGTATGATCTGGCTGGTTGATTTCAAGGATTTTGACATGTCAAATATCTCATTAAAAGCAACAAAGGAGACTGCACATATTTTACAAGAACATTATCCCGAACGCCTCGGATTGGCAATTCTGTATAACGCGCCCAAGTTTTTTGAACCCTTCTGGATGGTTGCAAAGCCTTTCCTGGAGACAAAAACTGCCAACAAAGTGAAATTTGTTTACTCTGACGACGTAAACTCAAAGAGGATAATAGAGGATCTGTTCGATATGGACCAGCTGGAGTCTGCGTTTGGTGGAAACAATAATGTTGGTTTCAATATAACCAAATATGCTGAGATGATGAAAGAAGACGATAAACAGATGCGTTGTTCCTGGTCCGCGGTAAATCCTAATAGCCTAGCCTCGGAAAAAGCTCAGAGTAGCGGTCTAGTCGGTTCTCAAATCACTAACCGTTCTGAATCCTCAGAGAATGAGAGGACAGATGGTGATATTCATATAACTAGAAAAGCAGATGGCAACTGA MENAILNLPSNQESMIWLVDFKDFDMSNISLKATKETAHILQEHYPERLGLAILYNAPKFFEPFWMVAKPFLETKTANKVKFVYSDDVNSKRIIEDLFDMDQLESAFGGNNNVGFNITKYAEMMKEDDKQMRCSWSAVNPNSLASEKAQSSGLVGSQITNRSESSENERTDGDIHITRKADGN Homology
BLAST of Cucsat.G7989 vs. ExPASy Swiss-Prot
Match: Q55CU8 (Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum OX=44689 GN=pitC PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 6.8e-16 Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of Cucsat.G7989 vs. ExPASy Swiss-Prot
Match: P53860 (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR16 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.2e-09 Identity = 44/140 (31.43%), Postives = 70/140 (50.00%), Query Frame = 0
BLAST of Cucsat.G7989 vs. ExPASy Swiss-Prot
Match: Q9UU99 (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC23B6.04c PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.8e-08 Identity = 54/178 (30.34%), Postives = 80/178 (44.94%), Query Frame = 0
BLAST of Cucsat.G7989 vs. ExPASy Swiss-Prot
Match: P53844 (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR17 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.4e-05 Identity = 33/115 (28.70%), Postives = 52/115 (45.22%), Query Frame = 0
BLAST of Cucsat.G7989 vs. NCBI nr
Match: XP_031740700.1 (phosphatidylinositol transfer protein 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 365 bits (938), Expect = 6.14e-126 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cucsat.G7989 vs. NCBI nr
Match: XP_004150523.1 (phosphatidylinositol transfer protein 3 isoform X1 [Cucumis sativus] >KGN54617.1 hypothetical protein Csa_012269 [Cucumis sativus]) HSP 1 Score: 365 bits (938), Expect = 1.92e-125 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cucsat.G7989 vs. NCBI nr
Match: TYK18594.1 (random slug protein 5-like [Cucumis melo var. makuwa]) HSP 1 Score: 335 bits (858), Expect = 4.40e-113 Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of Cucsat.G7989 vs. NCBI nr
Match: XP_008444104.1 (PREDICTED: random slug protein 5-like [Cucumis melo] >KAA0064224.1 random slug protein 5-like [Cucumis melo var. makuwa]) HSP 1 Score: 335 bits (858), Expect = 7.02e-113 Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of Cucsat.G7989 vs. NCBI nr
Match: XP_038899982.1 (phosphatidylinositol transfer protein 3-like isoform X2 [Benincasa hispida] >XP_038899983.1 phosphatidylinositol transfer protein 3-like isoform X2 [Benincasa hispida]) HSP 1 Score: 314 bits (804), Expect = 5.08e-105 Identity = 161/185 (87.03%), Postives = 167/185 (90.27%), Query Frame = 0
BLAST of Cucsat.G7989 vs. ExPASy TrEMBL
Match: A0A0A0L1Z8 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G378770 PE=4 SV=1) HSP 1 Score: 365 bits (938), Expect = 9.32e-126 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Cucsat.G7989 vs. ExPASy TrEMBL
Match: A0A5D3D4Y6 (Random slug protein 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001230 PE=4 SV=1) HSP 1 Score: 335 bits (858), Expect = 2.13e-113 Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of Cucsat.G7989 vs. ExPASy TrEMBL
Match: A0A5A7VAG2 (Random slug protein 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001740 PE=4 SV=1) HSP 1 Score: 335 bits (858), Expect = 3.40e-113 Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of Cucsat.G7989 vs. ExPASy TrEMBL
Match: A0A1S3BAC1 (random slug protein 5-like OS=Cucumis melo OX=3656 GN=LOC103487543 PE=4 SV=1) HSP 1 Score: 335 bits (858), Expect = 3.40e-113 Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of Cucsat.G7989 vs. ExPASy TrEMBL
Match: A0A6J1FR04 (phosphatidylinositol transfer protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111446132 PE=4 SV=1) HSP 1 Score: 275 bits (703), Expect = 3.18e-90 Identity = 140/182 (76.92%), Postives = 151/182 (82.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|