Cucsat.G7531 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATCAAATAAAATTTAATTTGACAAACAAAAAAAAAAGGATCATAATTATGGTAGAGGTCAATTCATTTCCATGGCTACTCTACTTTTGACAAACACAAACATTTTCATTTCCTTCTTTCACCAAAAATTGAAAATGAAAAATTTCTCATTCCTCACTTCTCTCCTCTTCTTCATCCTCACAAATTCCCCTGCAACTAGAAGCTTCGAAGTAGCCGTCAATGGGGGAATCGGAGTCGGCGTTACCATCGGCGGCAGCGGAGGAACCGGGGTTTGGATTGGTGGAAACAATGGCTCACCAACACCAAGGCTAAACAGAGCTTACACCGCACTACAATCATGGAAATCTGCCATTACAAGCGATCCGTTGGGGATTTTAACCACTTGGGTTGGTCCTAATGTTTGTTCTTACAGAGGGGTTTTTTGTGCACAAGTTCAAGACGAAACGACGTCCTCACCCGTCGACATTGTTGCCGGAATCGACCTAAATCACGCCAATCTCGGAGGTACACTAGTTAAAGAACTCTCGTTTCTCACTGAAATCACTCTGTTTCACTTAAATACCAACCGATTTGCCGGCACCGTACCGGAATCCTTCAGAGAATTGTCATCTCTCCAAGAATTAGATCTTAGTAACAACTTGTTTTCTGGTCCGTTTCCTATTCAAACATTATACATTCCGAATCTGATGTATTTAGACCTCAGATTTAACGATTTTCACGGACCCATTCCTGAAGATCTCTTCAACAAGAAACTCGATGCGATTTTTCTCAACAACAATCATTTCGAAGGAGAAATCCCTCAAAATCTTGGGAATTCCCCTGCTTCTGTGATTAATTTAGCTAATAACAAGCTATATGGGAATCTCCCAAATGGGTTTGGTTTGTTAGGTTCAACAATTAGAGAAATCTTGTTACTAAACAACCAATTAACTGGTTGTGTTCCAGAAGGAATTGGGTTTTTCTCTGAAATGCAAGTGTTTGATGTGAGTTTCAATTCATTAATGGGTCATTTACCTGATACTCTCTCTTGTTTAAACGAAATCCAGATTATGAATTTTGGGCATAATCGGCTATCTGGGGTTGTTCCTGATTTCATCTGTTCGTTGAAAAGCTTGGTGAATTTGACTGTTTCTTTCAATTTCTTTTCTGGGTTAAAGGAAGACTGTTCTTCTTCAAGGAACAATGTTCTTGGGAATTTAGGTTTCGATTTCTCCGGAAATTGTATTCCGGGAAAGGATTCACAAAGACCTCGTCCTGAATGTAATGCGATTCCTGGTGGGAGTTTGAATTGCTTTAGAATACCTTCCCTCGTGAAGCCTTTGGTTTGTGGGACATTGGGTGGAAGAACAGAGAGTGATCTTAGTTCATCGCCGCCATGAGAGGGAGAATTGAGAGAGATTGAAGAAGAGAAAAAAAAAATTACAAGAATTTTAGATGGGTTTGTTATTAATTTGATAGTGATTAATGAAATGTTTTTTTGGCTTCATTGTTCTTTTGTTCGTCCGTTCGTTCGTCGATTTTATTATTCTCCGATGAGTGTGTGCTTTTGAATGGATATGGGAATTTCAGTGTCATTAATTAATTAATGATTTACGAATTATAT ATGGCTACTCTACTTTTGACAAACACAAACATTTTCATTTCCTTCTTTCACCAAAAATTGAAAATGAAAAATTTCTCATTCCTCACTTCTCTCCTCTTCTTCATCCTCACAAATTCCCCTGCAACTAGAAGCTTCGAAGTAGCCGTCAATGGGGGAATCGGAGTCGGCGTTACCATCGGCGGCAGCGGAGGAACCGGGGTTTGGATTGGTGGAAACAATGGCTCACCAACACCAAGGCTAAACAGAGCTTACACCGCACTACAATCATGGAAATCTGCCATTACAAGCGATCCGTTGGGGATTTTAACCACTTGGGTTGGTCCTAATGTTTGTTCTTACAGAGGGGTTTTTTGTGCACAAGTTCAAGACGAAACGACGTCCTCACCCGTCGACATTGTTGCCGGAATCGACCTAAATCACGCCAATCTCGGAGATTATGAATTTTGGGCATAA MATLLLTNTNIFISFFHQKLKMKNFSFLTSLLFFILTNSPATRSFEVAVNGGIGVGVTIGGSGGTGVWIGGNNGSPTPRLNRAYTALQSWKSAITSDPLGILTTWVGPNVCSYRGVFCAQVQDETTSSPVDIVAGIDLNHANLGDYEFWA Homology
BLAST of Cucsat.G7531 vs. ExPASy Swiss-Prot
Match: Q9LUI1 (Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=LRX6 PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16 Identity = 41/69 (59.42%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Cucsat.G7531 vs. ExPASy Swiss-Prot
Match: Q9LJ64 (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PEX1 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 4.3e-16 Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of Cucsat.G7531 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.4e-14 Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of Cucsat.G7531 vs. ExPASy Swiss-Prot
Match: Q9XIB6 (Pollen-specific leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.0e-14 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of Cucsat.G7531 vs. ExPASy Swiss-Prot
Match: Q9LHF1 (Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=LRX4 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.2e-14 Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 0
BLAST of Cucsat.G7531 vs. NCBI nr
Match: XP_004135680.3 (leucine-rich repeat extensin-like protein 4 [Cucumis sativus] >KGN66193.1 hypothetical protein Csa_007056 [Cucumis sativus]) HSP 1 Score: 285 bits (730), Expect = 8.60e-93 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Cucsat.G7531 vs. NCBI nr
Match: TYK10136.1 (leucine-rich repeat extensin-like protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 233 bits (595), Expect = 1.18e-72 Identity = 118/124 (95.16%), Postives = 119/124 (95.97%), Query Frame = 0
BLAST of Cucsat.G7531 vs. NCBI nr
Match: XP_008450798.2 (PREDICTED: leucine-rich repeat extensin-like protein 4 [Cucumis melo]) HSP 1 Score: 232 bits (592), Expect = 3.33e-72 Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 0
BLAST of Cucsat.G7531 vs. NCBI nr
Match: XP_038878651.1 (leucine-rich repeat extensin-like protein 6 [Benincasa hispida]) HSP 1 Score: 221 bits (564), Expect = 5.10e-68 Identity = 110/126 (87.30%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of Cucsat.G7531 vs. NCBI nr
Match: XP_022960570.1 (leucine-rich repeat extensin-like protein 6 [Cucurbita moschata]) HSP 1 Score: 196 bits (498), Expect = 3.44e-58 Identity = 96/123 (78.05%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of Cucsat.G7531 vs. ExPASy TrEMBL
Match: A0A0A0LWP9 (LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G575090 PE=4 SV=1) HSP 1 Score: 285 bits (730), Expect = 4.16e-93 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Cucsat.G7531 vs. ExPASy TrEMBL
Match: A0A5D3CI93 (Leucine-rich repeat extensin-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002790 PE=4 SV=1) HSP 1 Score: 233 bits (595), Expect = 5.70e-73 Identity = 118/124 (95.16%), Postives = 119/124 (95.97%), Query Frame = 0
BLAST of Cucsat.G7531 vs. ExPASy TrEMBL
Match: A0A1S3BQ04 (leucine-rich repeat extensin-like protein 4 OS=Cucumis melo OX=3656 GN=LOC103492275 PE=4 SV=1) HSP 1 Score: 232 bits (592), Expect = 1.61e-72 Identity = 117/124 (94.35%), Postives = 119/124 (95.97%), Query Frame = 0
BLAST of Cucsat.G7531 vs. ExPASy TrEMBL
Match: A0A6J1H9G2 (leucine-rich repeat extensin-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111461309 PE=4 SV=1) HSP 1 Score: 196 bits (498), Expect = 1.66e-58 Identity = 96/123 (78.05%), Postives = 108/123 (87.80%), Query Frame = 0
BLAST of Cucsat.G7531 vs. ExPASy TrEMBL
Match: A0A6J1KT44 (leucine-rich repeat extensin-like protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111498417 PE=4 SV=1) HSP 1 Score: 194 bits (494), Expect = 9.24e-58 Identity = 99/133 (74.44%), Postives = 109/133 (81.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|