Cucsat.G5332 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G5332
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	short integuments 2, mitochondrial
Location	ctg1252: 407766 .. 416304 (+)
RNA-Seq Expression	Cucsat.G5332
Synteny	Cucsat.G5332

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTTAAGCCGTCCAATTTCACTTGCAATAACGGGCAAAGCCCAATGTAGTAATGTGGTTGAAGCCCATAACCGAAGAAGGCAAAACATGTCTAAAACCCCAAACCTCCGTCGTCGTCGGAGAAAACACAGAAATGAGAGGGATCACCGGAGTCGTGAAGAAGGCTCTTGGAGACATGGAGTTCACTGCCGGCGGTGGAGCCATCAATTGGTTCCCCGGCCACATGGCTGCAGCCACTCGTGCCATTCGTCATAGACTGAAGCTCGCGGACATGGTCATCGAGGTCAGGGATTCCCGAATTCCCTTGTCCTCGGCCAATCAAGACCTCCAGCCTCATCTCGCTTCCAAACGCCGCGTCATTGCCCTCAACAAGAAAGATTTGGCTAACCCTAATATCATGAATGTAAGACACCACTGAACCATTCTGTTTCATTGAGTTTTTGAAGTTTTGGCTATAGGATATGAAAATCATTTCCGAATTCGGAATCCTCTCTAACTATGAATTCTCAATATATATATTCTTCCGAATCTCCGTTTCAAAAGTCTGTAAATTGATATGTGAATGGATGTGTACGCTTGTGTATGTTCATTAATCAGTTTTTGTTTATAGTTTTTCTTTGTTCGCTTTGTTATCCTTACGACTTTAATTTTGCAGAAATGGGTTAACTTTTTTGACTCATGCAATCAAGATTGCGTACCAATTAACGCTCACAGTAAGAGTTCTGTTCGGAAGGTATTTTTCCTTTCTACAGTGCTGCAGTGGTATTCATTTATAGGTTGCAATTAATCTCGAGATTCTAGCACCTCATTTCCTATGATATATTGAATTGCTAGAACTATCGAAGATCGCATACTTTGTTGATACTTTTTTTTTTCTTTGGATGATGGCACTAGTTATGTTATTTATTATTTATTACTCACTTTAAAGATGAAAACTGATGAGTTAGACAAGTTTCTAGTTGTTTAGATTTTTCTTCATCCTTTCTGTTTTAAATTTAAAATTGAATGCTTATTAGTTTTGTGCATGTATGGTAAGTAAACTTAAAATGATCCTTTGACAACTCTTTAGGCTTCTTTTTGTATTTACTTACACATTACATCTCAATGTTGAATTGTCAACTTGTCATAAGTGTATTGCAAATTGCAGTAGCTTATTATTGGGTTTAGTGTTTAACTAGCTAGTTTGTTTGATTTAGTGTATTTCAATATTTATTTATTTTATTTTTCTGCTAAAAAGGCCTAACTGATTTTTTATTGATAAAAAAGCTTCTCGAGCTTGTGGAATTTAAACTGAAGGAAGCAATTTCAAGGGAACCTACTCTTCTTGTTATGGTCGTTGGTGTTCCGAATGTTGGGAAGTCGGCTTTAATTAATTCAATCCATCAAATTGCTTCTGAACGCTTTCCAGGTAAGACTAGTTCTTGGAGCAAGATGCCAATTTCTCTTTTCTATTGAAGTGTACATATTCTGTTTCGCTTGGTCTGGAGGCTTTGTTTATTAGACTTTTGTGGTTCAATAATTTTTCATAGTGCAGGAGAAAAGGAAGCGAGCTACTGTTGGTCCCTTGCCTGGGGTTACTCAAGATATAGCTGGCTACAAGGTAGTTTTGATCAACCACACATCTTCATTTTTAGTAATCAATTTCTACTTTTGCGTCTCCCCTCCTTTCTTCTTTGTGAGATGAAATCTTATAATCATGAAGTATCAACCATTTGCAATTCTTCTGATGTGCAGATTGCTCATCAACCTAGCATATATGTTCTAGACACTCCTGGTGTATTAGTTCCAAGTATCCAAGATATCGAGACAGGGTTAAAACTAGCACTTGCAGGTTGTTTCTAGTTTATAAGAATTTCTACTTTTTGTTTTTCAAACAACATTTTGGTAAGCTATATACTATAGCGTTATGGACACTGAGATATGCTATACAAGAATGATGTAATAATGTGAAATACTACTTGTGTGGTTGATTTCATTTAACTATTACTGCTGCTGGTCACACATATGGATTATATAATAAATAATTAATCATGCAATCTGACAACAATAAACAAAATTTGGAAGTACCGAAACTTCTTAAATTATTCTAACTTTTAGTCTAGAGCTAGACAATTTGAGAGAGCATGGAGTCCTCATCCCCTCTACCAACTGAGCCCATTTTCCAAGCTTAGCAGGATCACAACTTGCGATACTTTACTAGTATTCTTGTGATGGATAATGTATGGGTTTGGAGTGATGGTTTTATTTCCTCATCGTATTTTTCTGTTTTTGTGGAAGGCAGATTCCTTTTTCATGTGTTTGATGGATTCCAGTTTCCACACCCATAACGTAGCTTTTTGGTCTGAGTCCGAATGAGATATTTTTGTTTTCCAACCTCCTGAATCATATAATTGGATCTCATTCATTGTCAGTTTGGTTTAGTTTTCTCTTATTATTGTGATAGGAATAGCATCAAAGGGATATTAAGGGTATGTTACTAATTAGTGGAGTAGTTTGTTAGGGAAGTTGGTTATAAATAGAGGGAATGGGGAGTGGAGAAGATAGACAATATTTGGGGAGTGAATTAGGACTTGAGAGTTATCTCATGATTGAGCAGGTTCAAGTAGTTTATCTTGTATTTTCATTATTGTTGATCTTTCAATGTATTCGGTTCTATGGCACCATCATGTTGATATCAACTATATTGTGTACTGCATCTTCTTGTAGACTGATCCATAATTTTTCACATGGAAGCAGGATCTGTCAAGGATGCAGTGGTGGGTGAGGAGCGGATTGCTCAATATCTTCTGGCTGTTCTGAATTCTCGAAGGACTCCTTTCCATTGGAGGAGACATTTGAATAACAGAAGAGTGGAAGGTATTCGATATGAACCAGAGGAAAGGCACAAATTTAATCTTAATGACCTCCAGCCAAAGAGGAGGGCTCCTCCAAATAAGTCTGATGTGGTCTATGTTGAGGTAAGGAAAGAATTTCTTATTAGACTGATCAACTCCTAGAGTGTCTTTGGCTTCCAATGCTCCATGGGATCTTAATGAATAGTAGTTCACAATGGGAAGGAGAGAATTCCAGGTCTAGATAGTTCACAAGAACCAGACAGACGTTAGTTGTTGCTTTCTAAACAGTATCATTACTGTGCTTCTAATAGGGAACCAGATGGAAATCTTTATTGAAAAGAAATGCCATAAGGCAAATTACATTCACCATTGAAATAAGAACAACAACAGTTTCCCACTCACTCTCGAGAAGCCCTCACTTCCTAACCAACTAACTGATTTCCCTCCCTATCAATTTCTCTAAAATATCACTCTCCTTCTACTTATGTGGCCCCCACTCGACAGCTAATACCAGCTCACTTCCAACTATTCTTCAGAAGCCGAACTCCTGCAAACAATGACTTTCCCTTTTTCTACCCTTTCTATAATGCTGCAATACAATTGGAGGTCTATCATTACCATCCCCTTCAAGAACCACCTTGTCCTCAAGGTGATATTCTGGAATTTTCCTTTTGAAATCATCAAATAACTCCCATGTTGCTTGATTCAGCAAATCTTTCAGACCGACCAGAACTTCCCAAGCTGGAAGATAGATTCTTTCGATAACCAAAAACTTTAGCTGGCTAAGTCAACCATTCATGTGTCTCAGTTAAATAAGGAAGCATAGTTTGGACTTAATGATGTTGTCCCAATGCTCGTTTCAACCGAGAAACATGAAAGACATGATGGACAGTAGCAACAAATGGTTATTCCAATCGATAAGCAATGGATCCCACTCGCTCATACTCGATACGACCCAAATTATTTGCAAGAGAGCTTCTCATTTCGTCTTCGATGTAAAGTAGATTGCCTATATGGCCGAATTTTCAAAAACACTAAATCATTCATCTGGAATTGAACATCCCTTCGCTTTTGGTCAGCTTCTTTCTTCATTTTCTCTTGAGCAATTCGTAAGTGCTCCTTCAAAACACGAAAAGCCACATCTCTCTCCCTCAGCTATTGATCCAATGATGATTTAGCTTTAGTAAACTCGCCATAATAAAGCAAGGGTGGTGGTAATTGGCCATAGACTACCTGAAATGGAGTCACTCCAAAGGATATTTGATATGTTGTATTGTACCAATATTCTGCCAACACAGCCAGAAAATCCACTCTTTCATTCTCTCCCCACGAAAACAGTGCTAATAAGCTTCTACACTTCGATTCACCATTTCAGTTTGACCATCCAATTATGGATGTTATGCTGAACTTCTATTGAGTTGTGTTCCTGCCAAACAACAAAGTTTCTCGCAAAAAATGGCTTAGAAACACTTTACCCCTATATGACACAATAGATTGAGGATAACCATACAACTTAATGACCTCCCTTACAAATACATTAGCCACAAACTTTGTTGTGAATGGATTCTTTAAAGCTAAGAAATGAGCATATTTGCACAGCTGATCCACTACAACAAATATTTTTTTTTGGAAAAGGAGACATGCTTCTTTATTAATAATATTCAAAGTACAAGAGAGTTAAACATTGAGAATAATAGAGAAGCCTAGAAATGGGGGAGAGAGATAGAGATGATTAGTAAGTGCGCTTGGACATCTCAACTAGGTTGACACCCCATAACACCCTCATCAAATCCAAAATAATACGAAAGATATTCAGGTCATGCTAAGATCGAAAACAATGTTAAATACTCTCTAACAGAAGACAGATACAAAGCTGAAAAAAGATAAAACAAATGTGGGAATACAGAATAAATCCCAGCAACACTACAAAAACACAAAATTTATTCTAGCAATCTGGAACATAACAGTCCTGAATTTCTTCAGATGAAGGCAGTCCAGTTGAGGCATAAGTCCTGAATTGAATAACCTTTAAATTAAGCATTCAAAGAACACCAAGCAGCTGCATTTCTTTTAGAAGATTCTACTATATTAACCCAATCTCTTTTCTTATCATGGAAAATGCGTTGGTTGTGCTCAAACCAAATCTCTGCTAGCAACGCTTTTATCAAATTAACCAATATTAGAAAAGTTTTTTTTATAAATAAGGCCCTCTCAATAATTGAAATACATTGGTATGTAGAGAACCATAAAAGACCCAAACTGTTTTGAGCATAGAAAAGATGCTAAACTAGCATTTAGATGAGAAGGGGCATATAAAGAATAGATGCATTAGTTGCTCACTGTCCTTCAAGCATGGGGCACACTGATGGCAGCAAACAATTATTAGGAATTTTCCTTTGCAAAGTTCTGGAGCCATCAAGAAGACCGAATGCCATAACGCAAACCAGAACATTATTCTCCTTGGGTTGTTAGATTTCCAAAGTGCTTTAAAGCAATCTTTTTCAAAGGGAAAGAAGGAGAGAGGTGATTCGAAAGGGCTTAACTGATAAATGACCCGAGGTCTCTAGTGACCAAACTCTCCTATCTTCCAAATCTATTAAACCTTTCAAAGAAATGAGGGTTAATAGGCGCTGAAAATCTTGTATTTCCTCATCTTTCAGGGGTCTTCAAAAAATCAAAGACCAAGACTTTGTGACATAATCCCAGCAGGCAGCCACTGAGTCATTGGGCAGCTGAGCTAATTTGAAAAGATTTGGGAATTGAGTTTTAAGAGCTAATCTGGTCAATAGCTCCAAGTGTGGTTGGACTAGCATTCTCACTCACAGAGGAAGAAGATAAAATAGGGAACGTGGTTACCAGGTTCTTTGAATACATTGGTACAGGAGTGTTGGATGTCGTCCCTAGGATAGCCTCAATTGCTGCAATCTGTTGTTGAAGACCTTCCAGTTATTGCTAAGTTTTTCTAGATGAGGAAACTTGCATGATAGGGTTGAAATGTGCCGAAAATTCACCAACCTCAAATGTTGAGTGAATTTGAGGACTCTTATAATCAAGTTAATAACTAAGGTCATTGGGCATATAGATTTAACTGCAGAAGCGGTAGTCGCCGGTCAGAATTAGGTGGCAGAACACAAATCGCCACGTGGGGAACACTACATGCAGCAGATGAAGATGAGGGTGGCACGGTTGGGATTGCCGGCGACGTCTGAACATGATGGACCGACACGTGTAGTTCCTCCAGCGGTGCGTGAACTTCCGACAGCGGTGTGTGAGCGGGTTCTGGCGGCACGGACGACGAAAATATCTGCCGAATTATGTTTCCCGGCATTTTTTGAAGGCGGCGGAGCCATTCGTCCATGGCAGCATTGATTCAAGCATCGACGACGGCGACACTAAAACTGGCGGTTGTATCCTCTGTGTGATTTCCATCACTGGTCGTGTTTTCTAGGATGTGTTCAATGTCCCGCTCTGATACCATATTAAACCACCCATTCATTCAAAAGCTTAAGCTAGTAGTTGAAGCCTGAAGGCAAATTTAATTATATATCACCAACAGTTACTTCATTGAGTTTTAGTTTGCTAGATGGGATTCATTATTTGTGTTTATTTACACAAACAAAAAAGAGATTCGAGTGTAGTCACCCATCATCACACTTCCGAAAACACATGGAATGTGGCAAAACAAGTATAATTCAGCAGTTTAGAACTCTCTACTTTCTTTGGGAGGTCGTAGATATAGATTTCTACCCTCGTATTGGCGTTAATATATTTCACTGAAGAACAGAAAAGGGATAGCTATTTTGCGTTGGCTGCTTCATTTTCTTAACTTTATTTTTTATTTGGACGGAGATGGCGATGACTGAGTTTTCTTTTCCTAACATGTTTGGTATTTCCTTAGGAAAGGCTTCAGAGCGTTCCGGGTGATGTTTGGTCCTTGTATGATTCTTCGCTTCTCTCTACCAGCGTCGGTTCTTGAAATGATCTTTTAGGTCTGGAGGCATTTTTAAAATTTTTCCTCCTTTCTTGTAGGTTGTCTTGTTTGGCTGCCTTTCATGCTTCTTAAGAAGCACGAACATATACACGGCAATACGCCAATCTAAAATACTAAAATACTAGAACACGGACACATTTGGGGATGCTATTTTTTTATATTATACTTTTAGAATATATGTGCATTTAAGATCAAATACTCAATCAATCCCACTAAAATTGCATAAATGTCTGTCAGTTAGTTTAATTAATGATTGTCATCCTAACATTTAACAAATAATATTAAAAAATATGTAAAAGAGTTTCAACTTTGAAGATAGGGAAAAAAAACGGCAGTACGCAGATGGTAGCTGGCCGTAGCTTAAAAACGTTAATTGTAAAAATCTGCTGGCAGCGTTGGCAAAAATTTCTGCTCTTGTGAGAACTGGGGAGGCATCCTTAGTGCTGCAGCTACTCGGAAGTGCAGGACAAGGCCATGGGTTTTCGTTTTTATATATATTTCAAAAAGGAAGCTAATGGGCTTTAAAGTTGGGCCCAAATTTAAAACAATTTTGTTAATGACCATTTTAGGAATAATATAGTAACATTTAAAAAAATTATAAATATAGCAAAATTATTGCGGATAGACTTGTATCGTTGATAGATTTGTATGATTTATCCATGATAGACCAATATTTACAATATGGTCTATTGGTTCGATAGAATTTGACAAATTTTGCTATATTTGCAATTTTTTAAAAATGTTGCTATATACTTAATTATTTTGCATTATTTTGCATCTAATGGCTAAATTTGTAACTATCCCAATTATTATTTTTTTTCGGTGTGTTCACTGTCCGTTTCAGAAATTCAAAAAAATAAAAAACAGAACACTCAAATTGGTGTGTGGTCACGTGTCCATGAAATGTCCGTCTTAGATTGTTCTGATGAAACATCGGTTATTCACCAAAATCTATAACATTATACATCTTTCATATGTATATCCTGTCACCTCTTCTTTCTCACGATTTTCATTTGGAGAGACTCTTGTTGGTGTCAGTTTATTTTGTCCATCATTACTTGTTTTTTGTACCTCACTTTTGTTGCACTTTCTTCCTTCCTCCCGATGTTTGTGGGTTTATAAACCAAAAAAGAAACCTGTGTATACTTGTTTTCTAATTCATTTGTTCAGGATCTTGTAACTGAAGTTCAATGCACTCTGTACACAACTCTGTCGGAATTCGATGGTAATGTTGAAGACGAGAATGGTTTAGAAAGTCTTATAGAAGTGCAGTTTGAAGCATTGCAGAAAGCGATGAAGGTGTCACACAAGGCAGCAGAAGCTCGTTTGAGAGTATCGAAGAAACTGCTTACTCTATTCAGGGCAGGTAAGCTTGGTCAATTCATCCTTGATGATGTCCCTATCACAAAAGTTTCTTAGGAAATTTATATTCTCCGTGTTTTGTTGAAAGGACTTTGCTTTAATGGTGATTTAATTAGTAGAGCTATTAGTTTGTATTTTGAATTGTCAACTTATTGTAATATATTGGTTTAGTTATCTTGGTTTGATTGTATTTGTTAGTTGATATTGGGAGGAAGTTGCTAGTTTTATGCAACCGAGAGTTGGAGATTTGCTCTACTGCATCCAGGGCACGAGTATCAATTTTTTTGTTGACATGTCGATATTCTACGTTTTTATGGAAAGATATTAGTTGGAAGGATTGATTTTTTATTATGTCAGTATAAATTGTATCAAAGTTCACAAACGTACAAATAAACAACAAATTATTGCTAACATAAATG

Coding sequence (CDS)

ATGTGGTTGAAGCCCATAACCGAAGAAGGCAAAACATGTCTAAAACCCCAAACCTCCGTCGTCGTCGGAGAAAACACAGAAATGAGAGGGATCACCGGAGTCGTGAAGAAGGCTCTTGGAGACATGGAGTTCACTGCCGGCGGTGGAGCCATCAATTGGTTCCCCGGCCACATGGCTGCAGCCACTCGTGCCATTCGTCATAGACTGAAGCTCGCGGACATGGTCATCGAGGTCAGGGATTCCCGAATTCCCTTGTCCTCGGCCAATCAAGACCTCCAGCCTCATCTCGCTTCCAAACGCCGCGTCATTGCCCTCAACAAGAAAGATTTGGCTAACCCTAATATCATGAATAAATGGGTTAACTTTTTTGACTCATGCAATCAAGATTGCGTACCAATTAACGCTCACAGTAAGAGTTCTGTTCGGAAGCTTCTCGAGCTTGTGGAATTTAAACTGAAGGAAGCAATTTCAAGGGAACCTACTCTTCTTGTTATGGTCGTTGGTGTTCCGAATGTTGGGAAGTCGGCTTTAATTAATTCAATCCATCAAATTGCTTCTGAACGCTTTCCAGTGCAGGAGAAAAGGAAGCGAGCTACTGTTGGTCCCTTGCCTGGGGTTACTCAAGATATAGCTGGCTACAAGATTGCTCATCAACCTAGCATATATGTTCTAGACACTCCTGGTGTATTAGTTCCAAGTATCCAAGATATCGAGACAGGGTTAAAACTAGCACTTGCAGGATCTGTCAAGGATGCAGTGGTGGGTGAGGAGCGGATTGCTCAATATCTTCTGGCTGTTCTGAATTCTCGAAGGACTCCTTTCCATTGGAGGAGACATTTGAATAACAGAAGAGTGGAAGGTATTCGATATGAACCAGAGGAAAGGCACAAATTTAATCTTAATGACCTCCAGCCAAAGAGGAGGGCTCCTCCAAATAAGTCTGATGTGGTCTATGTTGAGGATCTTGTAACTGAAGTTCAATGCACTCTGTACACAACTCTGTCGGAATTCGATGGTAATGTTGAAGACGAGAATGGTTTAGAAAGTCTTATAGAAGTGCAGTTTGAAGCATTGCAGAAAGCGATGAAGGTGTCACACAAGGCAGCAGAAGCTCGTTTGAGAGTATCGAAGAAACTGCTTACTCTATTCAGGGCAGGTAAGCTTGGTCAATTCATCCTTGATGATGTCCCTATCACAAAAGTTTCTTAG

Protein sequence

MWLKPITEEGKTCLKPQTSVVVGENTEMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEKRKRATVGPLPGVTQDIAGYKIAHQPSIYVLDTPGVLVPSIQDIETGLKLALAGSVKDAVVGEERIAQYLLAVLNSRRTPFHWRRHLNNRRVEGIRYEPEERHKFNLNDLQPKRRAPPNKSDVVYVEDLVTEVQCTLYTTLSEFDGNVEDENGLESLIEVQFEALQKAMKVSHKAAEARLRVSKKLLTLFRAGKLGQFILDDVPITKVS

Homology

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BLAST of Cucsat.G5332 vs. ExPASy Swiss-Prot
Match: Q8L607 (Short integuments 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SIN2 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 7.5e-62
Identity = 117/157 (74.52%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 34  VVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQ 93
           V K  +G M F    G INWFPGHMAAATRAIR+RLKL+D+VIEVRD+RIPLSSAN+DLQ
Sbjct: 9   VKKGLIGGMSFAKDAGKINWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQ 68

Query: 94  PHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLK 153
             +++KRR+IALNKKDLANPN++NKW   F+S  QDC+ INAHS+SSV KLL+LVE KLK
Sbjct: 69  SQMSAKRRIIALNKKDLANPNVLNKWTRHFESSKQDCIAINAHSRSSVMKLLDLVELKLK 128

Query: 154 EAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP 191
           E I+REPTLLVMVVGVPNVGKSALINSIHQIA+ RFP
Sbjct: 129 EVIAREPTLLVMVVGVPNVGKSALINSIHQIAAARFP 165

[Close]

BLAST of Cucsat.G5332 vs. ExPASy Swiss-Prot
Match: B7GGD6 (Ribosome biogenesis GTPase A OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) OX=491915 GN=rbgA PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.1e-24
Identity = 55/139 (39.57%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 51  INWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDL 110
           I WFPGHMA A R +  +LKL D+V E+ D+RIP+SS N  +   +A+K R+I LNK D+
Sbjct: 6   IQWFPGHMAKAKREVTEKLKLIDIVFELVDARIPMSSRNPLIDEIVANKPRIILLNKADM 65

Query: 111 ANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLK--------EAISREPTL 170
           A+P++  +WV+FF +   D + I++ S + V++++ + + KL+        + + R   +
Sbjct: 66  ADPDVTKQWVDFFAAQQIDAIAIDSQSGTGVKQMVAVAKEKLRSKFEKMMAKGMKRPRAM 125

Query: 171 LVMVVGVPNVGKSALINSI 182
             ++VG+PNVGKS LIN +
Sbjct: 126 RALIVGIPNVGKSTLINRL 144

[Close]

BLAST of Cucsat.G5332 vs. ExPASy Swiss-Prot
Match: O82497 (DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DGP2 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.9e-22
Identity = 60/137 (43.80%), Postives = 90/137 (65.69%), Query Frame = 0


Query: 53  WFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPH--LASKRRVIALNKKDL 112
           W+  HMAAA RAI  R+ L D V+E+RD+RIPLSS  + L+    L SK R+I LNK +L
Sbjct: 28  WYGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSK-RIIVLNKMEL 87

Query: 113 ANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLKE---AISREPTLLVMVV 172
           A+P  + K +++F+  N     +N+H+K  V++LL  ++ +++E   A     T  +M++
Sbjct: 88  ADPLELKKCIDYFEERNYLSYAVNSHNKDCVKQLLNFLQSQVRELHKAGHSGHTTTMMLL 147

Query: 173 GVPNVGKSALINSIHQI 185
           G+PNVGKSAL NS+H I
Sbjct: 148 GIPNVGKSALSNSLHHI 163

[Close]

BLAST of Cucsat.G5332 vs. ExPASy Swiss-Prot
Match: C5D8U8 (Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rbgA PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.9e-21
Identity = 51/139 (36.69%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 51  INWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDL 110
           I WFPGHMA A R ++ +LKL D+V E+ D+RIPLSS N  +   L +K R++ LNK D+
Sbjct: 5   IQWFPGHMAKAKREVQEKLKLIDIVFELLDARIPLSSRNPMIHEILGNKPRIVLLNKADM 64

Query: 111 ANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLKE--------AISREPTL 170
           A+  +  +W+ +F+      + I+A + + +R+++   +  LK+         I     +
Sbjct: 65  ADETVTEQWIAYFERQQLHALAIDAQTGTGIRQIVSAAKEMLKDKFAKMAAKGIKNPRPM 124

Query: 171 LVMVVGVPNVGKSALINSI 182
             ++VG+PNVGKS LIN +
Sbjct: 125 RALIVGIPNVGKSTLINRL 143

[Close]

BLAST of Cucsat.G5332 vs. ExPASy Swiss-Prot
Match: Q819W8 (Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) OX=226900 GN=rbgA PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-20
Identity = 50/138 (36.23%), Postives = 79/138 (57.25%), Query Frame = 0


Query: 51  INWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDL 110
           I WFPGHMA A R +  +LKL D+VIE+ D+R+PLSS N  +   +  K R++ LNK D+
Sbjct: 3   IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62

Query: 111 ANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLKEAIS-------REPTLL 170
           A+  +  +W+ +F       + INA +   ++++    +  +KE          R   + 
Sbjct: 63  ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122

Query: 171 VMVVGVPNVGKSALINSI 182
            ++VG+PNVGKS LIN +
Sbjct: 123 ALIVGIPNVGKSTLINKL 140

[Close]

BLAST of Cucsat.G5332 vs. NCBI nr
Match: XP_031740287.1 (short integuments 2, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 321 bits (823), Expect = 3.44e-107
Identity = 164/168 (97.62%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 27  EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS 86
           EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS
Sbjct: 15  EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS 74

Query: 87  SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE 146
           SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE
Sbjct: 75  SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE 134

Query: 147 LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPGEKE 194
           LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP +++
Sbjct: 135 LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEK 182

[Close]

BLAST of Cucsat.G5332 vs. NCBI nr
Match: XP_004149387.2 (short integuments 2, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 321 bits (823), Expect = 2.67e-106
Identity = 164/168 (97.62%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 27  EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS 86
           EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS
Sbjct: 15  EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS 74

Query: 87  SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE 146
           SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE
Sbjct: 75  SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE 134

Query: 147 LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPGEKE 194
           LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP +++
Sbjct: 135 LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEK 182

[Close]

BLAST of Cucsat.G5332 vs. NCBI nr
Match: XP_038883550.1 (short integuments 2, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 311 bits (798), Expect = 9.87e-103
Identity = 157/167 (94.01%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 28  MRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSS 87
           MRGI GVVKKALGDMEFTAGGGA+NWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSS
Sbjct: 1   MRGINGVVKKALGDMEFTAGGGAVNWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSS 60

Query: 88  ANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLEL 147
           ANQDLQPHL+SKRRVIALNKKDLANPNIM+KWV+FFDSCNQDC+PINAHSKSSVRKLLEL
Sbjct: 61  ANQDLQPHLSSKRRVIALNKKDLANPNIMHKWVHFFDSCNQDCIPINAHSKSSVRKLLEL 120

Query: 148 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPGEKE 194
           VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP +++
Sbjct: 121 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEK 167

[Close]

BLAST of Cucsat.G5332 vs. NCBI nr
Match: KAE8649358.1 (hypothetical protein Csa_019164 [Cucumis sativus])

HSP 1 Score: 321 bits (823), Expect = 2.58e-101
Identity = 164/168 (97.62%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 27  EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS 86
           EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS
Sbjct: 15  EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS 74

Query: 87  SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE 146
           SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE
Sbjct: 75  SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE 134

Query: 147 LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPGEKE 194
           LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP +++
Sbjct: 135 LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEK 182

[Close]

BLAST of Cucsat.G5332 vs. NCBI nr
Match: TYK11088.1 (short integuments 2 [Cucumis melo var. makuwa])

HSP 1 Score: 307 bits (787), Expect = 4.17e-101
Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 28  MRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSS 87
           MRGI GV+KKALGDMEFTAGGGAINWFPGHMAAA RAIRHRLKLADMVIEVRDSRIPLSS
Sbjct: 1   MRGINGVMKKALGDMEFTAGGGAINWFPGHMAAAIRAIRHRLKLADMVIEVRDSRIPLSS 60

Query: 88  ANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLEL 147
           ANQDLQPHL+SKRRVIALNKKDLAN NIMNKWV+FFDSCNQDC+PINAHSKSSVRKLLEL
Sbjct: 61  ANQDLQPHLSSKRRVIALNKKDLANSNIMNKWVDFFDSCNQDCIPINAHSKSSVRKLLEL 120

Query: 148 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPGEKE 194
           VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP +++
Sbjct: 121 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEK 167

[Close]

BLAST of Cucsat.G5332 vs. ExPASy TrEMBL
Match: A0A0A0L141 (G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G168980 PE=4 SV=1)

HSP 1 Score: 321 bits (823), Expect = 1.32e-107
Identity = 164/168 (97.62%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 27  EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS 86
           EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS
Sbjct: 15  EMRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLS 74

Query: 87  SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE 146
           SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE
Sbjct: 75  SANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLE 134

Query: 147 LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPGEKE 194
           LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP +++
Sbjct: 135 LVEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEK 182

[Close]

BLAST of Cucsat.G5332 vs. ExPASy TrEMBL
Match: A0A5D3CIR7 (Short integuments 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00780 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 2.02e-101
Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 28  MRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSS 87
           MRGI GV+KKALGDMEFTAGGGAINWFPGHMAAA RAIRHRLKLADMVIEVRDSRIPLSS
Sbjct: 1   MRGINGVMKKALGDMEFTAGGGAINWFPGHMAAAIRAIRHRLKLADMVIEVRDSRIPLSS 60

Query: 88  ANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLEL 147
           ANQDLQPHL+SKRRVIALNKKDLAN NIMNKWV+FFDSCNQDC+PINAHSKSSVRKLLEL
Sbjct: 61  ANQDLQPHLSSKRRVIALNKKDLANSNIMNKWVDFFDSCNQDCIPINAHSKSSVRKLLEL 120

Query: 148 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPGEKE 194
           VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP +++
Sbjct: 121 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEK 167

[Close]

BLAST of Cucsat.G5332 vs. ExPASy TrEMBL
Match: A0A1S3CEC4 (short integuments 2, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499512 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 2.29e-101
Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 28  MRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSS 87
           MRGI GV+KKALGDMEFTAGGGAINWFPGHMAAA RAIRHRLKLADMVIEVRDSRIPLSS
Sbjct: 1   MRGINGVMKKALGDMEFTAGGGAINWFPGHMAAAIRAIRHRLKLADMVIEVRDSRIPLSS 60

Query: 88  ANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLEL 147
           ANQDLQPHL+SKRRVIALNKKDLAN NIMNKWV+FFDSCNQDC+PINAHSKSSVRKLLEL
Sbjct: 61  ANQDLQPHLSSKRRVIALNKKDLANSNIMNKWVDFFDSCNQDCIPINAHSKSSVRKLLEL 120

Query: 148 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPGEKE 194
           VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP +++
Sbjct: 121 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEK 167

[Close]

BLAST of Cucsat.G5332 vs. ExPASy TrEMBL
Match: A0A5A7ULU0 (Short integuments 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00560 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 2.37e-101
Identity = 156/167 (93.41%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 28  MRGITGVVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSS 87
           MRGI GV+KKALGDMEFTAGGGAINWFPGHMAAA RAIRHRLKLADMVIEVRDSRIPLSS
Sbjct: 1   MRGINGVMKKALGDMEFTAGGGAINWFPGHMAAAIRAIRHRLKLADMVIEVRDSRIPLSS 60

Query: 88  ANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLEL 147
           ANQDLQPHL+SKRRVIALNKKDLAN NIMNKWV+FFDSCNQDC+PINAHSKSSVRKLLEL
Sbjct: 61  ANQDLQPHLSSKRRVIALNKKDLANSNIMNKWVDFFDSCNQDCIPINAHSKSSVRKLLEL 120

Query: 148 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPGEKE 194
           VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP +++
Sbjct: 121 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPVQEK 167

[Close]

BLAST of Cucsat.G5332 vs. ExPASy TrEMBL
Match: A0A6J1A619 (short integuments 2, mitochondrial isoform X2 OS=Herrania umbratica OX=108875 GN=LOC110415182 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 4.18e-98
Identity = 145/190 (76.32%), Postives = 165/190 (86.84%), Query Frame = 0


Query: 30  GITGVVKKALG--DMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSS 89
           GI G+ KK +G  +M F   GG INWFPGHMAAATRAIR+RLKL+D+ IEVRD+RIP SS
Sbjct: 2   GIKGIAKKVVGVGEMGFNKEGGVINWFPGHMAAATRAIRNRLKLSDLAIEVRDARIPFSS 61

Query: 90  ANQDLQPHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLEL 149
           A+QDLQPHL++KRR+IALNKKDLAN N++NKWV +FDSC QDC+PINAHS+SSVRKLLEL
Sbjct: 62  AHQDLQPHLSAKRRIIALNKKDLANSNVLNKWVRYFDSCKQDCLPINAHSRSSVRKLLEL 121

Query: 150 VEFKLKEAISREPTLLVMVVGVPNVGKSALINSIHQIASERFPGEKEASYCWSLAWGYSR 209
           VEFKLKE ISREPTLLVMVVGVPNVGKSALINSIHQIAS RFPG+ E S+C  +A  Y R
Sbjct: 122 VEFKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIASTRFPGKDETSHCGPIARCYPR 181

Query: 210 YSWLQDCSST 217
           Y W+QDCSST
Sbjct: 182 YCWVQDCSST 191

[Close]

BLAST of Cucsat.G5332 vs. TAIR 10
Match: AT2G41670.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 238.4 bits (607), Expect = 5.3e-63
Identity = 117/157 (74.52%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 34  VVKKALGDMEFTAGGGAINWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQ 93
           V K  +G M F    G INWFPGHMAAATRAIR+RLKL+D+VIEVRD+RIPLSSAN+DLQ
Sbjct: 9   VKKGLIGGMSFAKDAGKINWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQ 68

Query: 94  PHLASKRRVIALNKKDLANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLK 153
             +++KRR+IALNKKDLANPN++NKW   F+S  QDC+ INAHS+SSV KLL+LVE KLK
Sbjct: 69  SQMSAKRRIIALNKKDLANPNVLNKWTRHFESSKQDCIAINAHSRSSVMKLLDLVELKLK 128

Query: 154 EAISREPTLLVMVVGVPNVGKSALINSIHQIASERFP 191
           E I+REPTLLVMVVGVPNVGKSALINSIHQIA+ RFP
Sbjct: 129 EVIAREPTLLVMVVGVPNVGKSALINSIHQIAAARFP 165

[Close]

BLAST of Cucsat.G5332 vs. TAIR 10
Match: AT4G10650.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 7.0e-23
Identity = 60/137 (43.80%), Postives = 90/137 (65.69%), Query Frame = 0


Query: 53  WFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPH--LASKRRVIALNKKDL 112
           W+  HMAAA RAI  R+ L D V+E+RD+RIPLSS  + L+    L SK R+I LNK +L
Sbjct: 28  WYGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSK-RIIVLNKMEL 87

Query: 113 ANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLELVEFKLKE---AISREPTLLVMVV 172
           A+P  + K +++F+  N     +N+H+K  V++LL  ++ +++E   A     T  +M++
Sbjct: 88  ADPLELKKCIDYFEERNYLSYAVNSHNKDCVKQLLNFLQSQVRELHKAGHSGHTTTMMLL 147

Query: 173 GVPNVGKSALINSIHQI 185
           G+PNVGKSAL NS+H I
Sbjct: 148 GIPNVGKSALSNSLHHI 163

[Close]

BLAST of Cucsat.G5332 vs. TAIR 10
Match: AT4G02790.1 (GTP-binding family protein )

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-16
Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 51  INWFPGHMAAATRAIRHRLKLADMVIEVRDSRIPLSSANQDLQPHLASKRRVIALNKKDL 110
           + W+PGH+    + +R +LKL D+VIEVRD+RIPLS+ +  +   L +++R++ LN++D+
Sbjct: 96  VQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDM 155

Query: 111 ANPNIMNKWVNFFDSCNQDCVPINAHSKSSVRKLLEL-------VEFKLKEAISREPTLL 170
            + +  N W  +F       +  N        KL  L       V  K +E      ++ 
Sbjct: 156 ISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVR 215

Query: 171 VMVVGVPNVGKSALINSI 182
             ++G PNVGKS+LIN +
Sbjct: 216 AGIIGYPNVGKSSLINRL 233

[Close]

BLAST of Cucsat.G5332 vs. TAIR 10
Match: AT3G07050.1 (GTP-binding family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.9e-04
Identity = 40/140 (28.57%), Postives = 68/140 (48.57%), Query Frame = 0


Query: 69  LKLADMVIEVRDSRIPLSSANQDLQPHL----ASKRRVIALNKKDLANPNIMNKWVNFFD 128
           ++L+D+++EV D+R PL +   D++  +     +K  V+ LNK DL       KW+ +  
Sbjct: 134 IELSDVILEVLDARDPLGTRCTDMERMVMQAGPNKHLVLLLNKIDLVPREAAEKWLMYLR 193

Query: 129 --------SCNQDCVPINAHSKSS----VRKLLELVE-------FKLKEAISR----EPT 182
                    C+      N   KSS       +L+  +        KL +  SR    + +
Sbjct: 194 EEFPAVAFKCSTQEQRSNLGWKSSKASKPSNMLQTSDCLGADTLIKLLKNYSRSHELKKS 253

The following BLAST results are available for this feature:

BLAST of Cucsat.G5332 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L607	7.5e-62	74.52	Short integuments 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SIN2 PE=1 ...	[more]
B7GGD6	8.1e-24	39.57	Ribosome biogenesis GTPase A OS=Anoxybacillus flavithermus (strain DSM 21510 / W...	[more]
O82497	9.9e-22	43.80	DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DGP2 PE=3 SV=1	[more]
C5D8U8	2.9e-21	36.69	Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rbgA...	[more]
Q819W8	2.4e-20	36.23	Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JC...	[more]

BLAST of Cucsat.G5332 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740287.1	3.44e-107	97.62	short integuments 2, mitochondrial isoform X2 [Cucumis sativus]	[more]
XP_004149387.2	2.67e-106	97.62	short integuments 2, mitochondrial isoform X1 [Cucumis sativus]	[more]
XP_038883550.1	9.87e-103	94.01	short integuments 2, mitochondrial isoform X1 [Benincasa hispida]	[more]
KAE8649358.1	2.58e-101	97.62	hypothetical protein Csa_019164 [Cucumis sativus]	[more]
TYK11088.1	4.17e-101	93.41	short integuments 2 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G5332 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L141	1.32e-107	97.62	G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G168980 PE=4 SV=1	[more]
A0A5D3CIR7	2.02e-101	93.41	Short integuments 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G0...	[more]
A0A1S3CEC4	2.29e-101	93.41	short integuments 2, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7ULU0	2.37e-101	93.41	Short integuments 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G...	[more]
A0A6J1A619	4.18e-98	76.32	short integuments 2, mitochondrial isoform X2 OS=Herrania umbratica OX=108875 GN...	[more]

BLAST of Cucsat.G5332 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41670.1	5.3e-63	74.52	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT4G10650.1	7.0e-23	43.80	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT4G02790.1	2.2e-16	32.61	GTP-binding family protein	[more]
AT3G07050.1	1.9e-04	28.57	GTP-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 34..180 e-value: 2.5E-29 score: 104.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 40..165
None	No IPR available	PANTHER	PTHR45782:SF7	SHORT INTEGUMENTS 2, MITOCHONDRIAL-LIKE	coord: 33..176
None	No IPR available	PANTHER	PTHR45782	MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1	coord: 33..176
None	No IPR available	CDD	cd01856	YlqF	coord: 36..171 e-value: 5.97003E-59 score: 180.802

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G5332.T2	Cucsat.G5332.T2	mRNA
Cucsat.G5332.T1	Cucsat.G5332.T1	mRNA
Cucsat.G5332.T4	Cucsat.G5332.T4	mRNA
Cucsat.G5332.T5	Cucsat.G5332.T5	mRNA
Cucsat.G5332.T3	Cucsat.G5332.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0048481	plant ovule development
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009536	plastid
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016787	hydrolase activity