Cucsat.G5187 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G5187
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein LAX PANICLE 2-like
Location	ctg1227: 5299670 .. 5302262 (-)
RNA-Seq Expression	Cucsat.G5187
Synteny	Cucsat.G5187

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAATAAGGGATTTTATGCTTCAACATCAAAGCAAGAAAAAGCACTTCCATAGTGATTATTCTTCAATAATCACCAACTCTGCTGGTTTGTGGTTTTCACTACTCTCTTCACCCAACAGGTCAAACTTATAAACTCTTTTCTTCTCCTTCTTTTTCCTTGATCTATCATCTTCAAAAAAAAGAAAAAAAAGCTTTGATTTTCTTTCCCCAATGAATTTTGTAGAGTTTTTTTTTTTTGTTACAACATAAATAAATAACTAATGAATGTTTATATTGTTATATAACAGTTGATTAAACTTCTTTTTTTTTTTTTTCGAAATCGATAGAACGTATTTTGATGTATTATGAAGTTTTTTTTAAGTAAATGTAAGATTATTGTAATTATTAATATAATTTGAATTTGAAATGTGGTAGGAAGGGAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGTAAGTGACAACATTCAAAACACACTATCAAATCATACAAACTTTTCAAATTTCCCAGTTTTTTGTGTACTGATTGTTGTTTTTATTTTTAAAACCTTTCTTAAATATTATAGAATATATATATCAAAGATGCAAGCGTAATTATCTACATAAGTTGACTAACTTAAATGTTGATTGAAATGCTATTGAGTGGGTAAAGTACTCTTGTTTAGAAAGACATATTTTCAGAAATTTAAAATTAAATAATGATTTCTTTTCCAAAAAACAAATAAACATTACAACCAATCCATTAAAACTCAAAACTAATTAATTTTTATATCCATTTAAACTCTCTTGAACTTTCCTAAGGAAATCAATCTAGACTTTTTTTTTTCTTTTTCTTTTTTGAGATTTAATTTATAGTTGATTTTCACATGATTATATTTAAGATAACTACCTCAAACTCACCACAATACCATTATCTTTCTCTTAAAAGTCCTCCAAAATAGTAAACTATATTGTCACGTAATTCTTTTTAAAGAAGTATATCAAAAAAATAGTGAAAATGAAAAGTTAAACAGTTCACTCAGATATTACATTATAGTAAAGTTGTTGCTATCAATATAGTTGATAGCAATTTTCTCGGCTTTAAATTACTGATCAAAAGAACTAGAGTTGGAGGGTATATAGTTTTTTTTTTCAATGTGATTTTTTTATTAAAAGAAATAATAAAGTTTGACCTGAGAAGAAAAACTAGAGTTGGGATTGCAAATAATAATAATAATATATTCGTTGTATGTATTTGGTCTGAAATCAAATGATGAGAGGATGCAGTGAGAAAAGGAAAGCCTGAGTTATGGATTTTGGTGAAAAACTGTTTAGGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGCTGGGTCTCTCCAATCAAGCTGAGGTAACAAAACGCAAAACTATCTCATTATTTCTTTCAAATAAACTTAAAGTAAAAGAAAAGATTATTACCTATCACATATTTACTAAATTGTCCAATTATAAATATTACGTACTAAATTTGTTTAGCTTTATCAGATTGGAAGAGATAAATGAAAGATTGGTGGATCTTGAAATTCATTCAAAACTTTATTCTCAAATCATACATTATTATATCTTTTATATTATGATGCTCTCTAGTTTTCTTTTTATTGAAATGCCTACTCTAGCTTTTTCTTTTATTTTATGGAAATGTCTTTTATGAAAAAAATAATAATAAATAATGATGATGAATAATGTGAAAAAGGTAATACACATTTCACATGTCAATATTTTCATTAATATCTACACATTTTTTGAATTCAATGTTGTGAACCAATATTAGAAAAACCTACAAAAACTCAAAAAAGAATTATCAAAATGTTATTGATACAAATATAATATAATATAAATAATAAGGTAAGTTTATTAATTTAAAAATATCAAATATTTATTTATTTTTTAATTTAATTTTTTTTATATAATTTTGTTTAAAATATCCATCAAAATTACACCTTGATAATTTTTTAAACCTTTTGACTACAACTTAGATCAGATGTAACATTTTCAATTACAAATGAATAGTTCTTTAAAAAAATATTTTTTTAAAATATAATATTTATCACATCACAACTTTGTAATTAGATTGTGCAGAGAGTGAGGTGTGATACATCAAAGTATTTATCATATGAAAAATGTTTTCAAATATTAAAAAAGAAATCATCTGGTTCAAAAGTAAACATGCATGGCTTAAAAGTGATTAATTAATTCCGTGCTATTACTAGTTTTTTTTTTAATATTCATTCTCTCTCTAATAATTACAAAATCAGAAGTGGTTTTGAAAAAATAAAGTAAGAGATGAAGCATGCATGAGATGTCTCACTCAAATGTCTTAGTGAGTGAGAGTGAGTGTGTTGGGATATGATGCATGCAAAATATTGGAAATGAATCAGTAAAGAAGAGATAGAGAGAGGGTAATGATGAATTGAGGGGTTCATTTACTTATTTATTTAATTTTCTTACTCATTTTTAAAGTTCTGCTGGTTTTGTGAAGGTTGAATTATGGTGCATGGGAGAGAGACTGTTGCATACTCAATCACTAAAGCAAGTGAGAGATGG

Coding sequence (CDS)

GGAATAAGGGATTTTATGCTTCAACATCAAAGCAAGAAAAAGCACTTCCATAGTGATTATTCTTCAATAATCACCAACTCTGCTGGTTTGTGGTTTTCACTACTCTCTTCACCCAACAGGAAGGGAGGAGCAGCACTGCCTCAGATACCCAAACCCTACATTAGAGTCAAGGATGAGAAGATGACAGTGTTGATGGTGAAGAAGTACCTGCTCACAAAGCTGGGTCTCTCCAATCAAGCTGAGGTTGAATTATGGTGCATGGGAGAGAGACTGTTGCATACTCAATCACTAAAGCAAGTGAGAGAT

Protein sequence

GIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGERLLHTQSLKQVRD

Homology

[Close]

BLAST of Cucsat.G5187 vs. ExPASy Swiss-Prot
Match: G3XKQ9 (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-13
Identity = 36/81 (44.44%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 22  SIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAE 81
           S +  +AG+WF L ++P +     LPQIP+ Y+R+KD ++TV ++ KYL+ KLGL +++E
Sbjct: 279 SAVAAAAGVWFVLQAAPLQGREPFLPQIPRSYLRIKDGRVTVRLLTKYLVNKLGLEDESE 338

Query: 82  VELWCMGERLLHTQSLKQVRD 103
           VE+ C G +LL   +L+ VRD
Sbjct: 339 VEITCRGRQLLPILTLQHVRD 359

[Close]

BLAST of Cucsat.G5187 vs. ExPASy Swiss-Prot
Match: Q94AY3 (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-12
Identity = 33/73 (45.21%), Postives = 52/73 (71.23%), Query Frame = 0


Query: 30  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGE 89
           +WFSL++S N++G A+LPQIP  Y+R++D  + V  ++KYL+ KL L ++ EVE+ CMGE
Sbjct: 310 VWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEITCMGE 369

Query: 90  RLLHTQSLKQVRD 103
            ++ T  L  + D
Sbjct: 370 PVIPTLQLHSLVD 382

[Close]

BLAST of Cucsat.G5187 vs. ExPASy Swiss-Prot
Match: Q9M9Y4 (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 4.3e-12
Identity = 31/73 (42.47%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 30  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGE 89
           +WFSL++S +++GG +LPQIP  ++R++D   TV  ++KYL+ KL L ++ E+E+ CMGE
Sbjct: 311 VWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEIKCMGE 370

Query: 90  RLLHTQSLKQVRD 103
            ++ T +L  + D
Sbjct: 371 AVIPTLTLYNLVD 383

[Close]

BLAST of Cucsat.G5187 vs. ExPASy Swiss-Prot
Match: Q9LS86 (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At3g23060 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-07
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 26  NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELW 85
           N+  +WFSL  S  +     LP I    IRVKD  MTV  +KKYL+ KLGL ++ +VE+W
Sbjct: 361 NNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEIW 420

Query: 86  CMGERLLHTQSLKQVRD 103
              E +  + +L  + D
Sbjct: 421 LRDEPVCSSLTLHNLVD 437

[Close]

BLAST of Cucsat.G5187 vs. NCBI nr
Match: KAE8652308.1 (hypothetical protein Csa_022227 [Cucumis sativus])

HSP 1 Score: 166 bits (421), Expect = 7.42e-49
Identity = 81/83 (97.59%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1   GIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEK 60
           GIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEK
Sbjct: 76  GIRDFMLQHQSKKKHFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEK 135

Query: 61  MTVLMVKKYLLTKLGLSNQAEVE 83
           MTVLMVKKYLLTKLGLSNQAE++
Sbjct: 136 MTVLMVKKYLLTKLGLSNQAELD 158

[Close]

BLAST of Cucsat.G5187 vs. NCBI nr
Match: XP_022931988.1 (protein LAX PANICLE 2-like [Cucurbita moschata])

HSP 1 Score: 148 bits (373), Expect = 1.74e-42
Identity = 80/113 (70.80%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 1   GIRDFMLQHQSKK-----------KHFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQI 60
           GI  FM    ++K            HFH   S    N AGLWFSL SSPNRKGGA LPQI
Sbjct: 60  GIMGFMSTQNNQKWAFHSHSLTNFPHFHGLSSPPPPNPAGLWFSLRSSPNRKGGAPLPQI 119

Query: 61  PKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGERLLHTQSLKQVRD 102
           PK YIRVKDEKMTVLMVKKYLLTKLGLS+QAEVELWCMGERLL TQSLKQVRD
Sbjct: 120 PKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEVELWCMGERLLQTQSLKQVRD 172

[Close]

BLAST of Cucsat.G5187 vs. NCBI nr
Match: KAG6571319.1 (Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148 bits (373), Expect = 1.74e-42
Identity = 80/113 (70.80%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 1   GIRDFMLQHQSKK-----------KHFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQI 60
           GI  FM    ++K            HFH   S    N AGLWFSL SSPNRKGGA LPQI
Sbjct: 60  GIMGFMSTQNNQKWAFHSHSLTNFPHFHGLSSPPPPNPAGLWFSLRSSPNRKGGAPLPQI 119

Query: 61  PKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGERLLHTQSLKQVRD 102
           PK YIRVKDEKMTVLMVKKYLLTKLGLS+QAEVELWCMGERLL TQSLKQVRD
Sbjct: 120 PKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEVELWCMGERLLQTQSLKQVRD 172

[Close]

BLAST of Cucsat.G5187 vs. NCBI nr
Match: XP_039026197.1 (protein LAX PANICLE 2-like [Hibiscus syriacus])

HSP 1 Score: 112 bits (280), Expect = 3.98e-29
Identity = 57/86 (66.28%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 17  HSDYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGL 76
           H DYS      + LWF+L S  NR G  ALPQIPK YIRVKDE +T+ MVKKYL+TKLG+
Sbjct: 29  HHDYSRRTRPHSDLWFTLHSYTNRNG-EALPQIPKAYIRVKDENVTIFMVKKYLVTKLGV 88

Query: 77  SNQAEVELWCMGERLLHTQSLKQVRD 102
           SN+AEVE+ CMG+RLL TQ+LKQVRD
Sbjct: 89  SNEAEVEILCMGQRLLQTQTLKQVRD 113

[Close]

BLAST of Cucsat.G5187 vs. NCBI nr
Match: XP_017971263.1 (PREDICTED: uncharacterized protein LOC18612903 isoform X1 [Theobroma cacao])

HSP 1 Score: 115 bits (287), Expect = 9.49e-29
Identity = 55/84 (65.48%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 19  DYSSIITNSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSN 78
           DY +     +GLWF+L S  NR+ G ALPQIPK YIRVKDE +T+ MVKKYL+TKLGLSN
Sbjct: 160 DYLAGTRPHSGLWFTLQSYTNRRNGEALPQIPKAYIRVKDENVTIFMVKKYLVTKLGLSN 219

Query: 79  QAEVELWCMGERLLHTQSLKQVRD 102
           +AEV++ CMG++LLHT +LKQVRD
Sbjct: 220 EAEVDISCMGQKLLHTLTLKQVRD 243

[Close]

BLAST of Cucsat.G5187 vs. ExPASy TrEMBL
Match: A0A6J1F0B3 (protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV=1)

HSP 1 Score: 148 bits (373), Expect = 8.41e-43
Identity = 80/113 (70.80%), Postives = 83/113 (73.45%), Query Frame = 0


Query: 1   GIRDFMLQHQSKK-----------KHFHSDYSSIITNSAGLWFSLLSSPNRKGGAALPQI 60
           GI  FM    ++K            HFH   S    N AGLWFSL SSPNRKGGA LPQI
Sbjct: 60  GIMGFMSTQNNQKWAFHSHSLTNFPHFHGLSSPPPPNPAGLWFSLRSSPNRKGGAPLPQI 119

Query: 61  PKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGERLLHTQSLKQVRD 102
           PK YIRVKDEKMTVLMVKKYLLTKLGLS+QAEVELWCMGERLL TQSLKQVRD
Sbjct: 120 PKAYIRVKDEKMTVLMVKKYLLTKLGLSHQAEVELWCMGERLLQTQSLKQVRD 172

[Close]

BLAST of Cucsat.G5187 vs. ExPASy TrEMBL
Match: A0A5D2F0S3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A10G186800v1 PE=4 SV=1)

HSP 1 Score: 114 bits (285), Expect = 8.39e-29
Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 28  AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCM 87
           +GLWF+L S  NR+ G ALPQIPK YIRVKDE +T+ MVKKYL+ KLGLSN+AEVE+ CM
Sbjct: 168 SGLWFTLHSYTNRRNGEALPQIPKAYIRVKDENVTIFMVKKYLVRKLGLSNEAEVEISCM 227

Query: 88  GERLLHTQSLKQVRD 102
           G+RL+HTQ+LKQVRD
Sbjct: 228 GQRLVHTQTLKQVRD 242

[Close]

BLAST of Cucsat.G5187 vs. ExPASy TrEMBL
Match: A0A5D2XMI8 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A10G171700v1 PE=4 SV=1)

HSP 1 Score: 114 bits (285), Expect = 8.39e-29
Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 28  AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCM 87
           +GLWF+L S  NR+ G ALPQIPK YIRVKDE +T+ MVKKYL+ KLGLSN+AEVE+ CM
Sbjct: 168 SGLWFTLHSYTNRRNGEALPQIPKAYIRVKDENVTIFMVKKYLVRKLGLSNEAEVEISCM 227

Query: 88  GERLLHTQSLKQVRD 102
           G+RL+HTQ+LKQVRD
Sbjct: 228 GQRLVHTQTLKQVRD 242

[Close]

BLAST of Cucsat.G5187 vs. ExPASy TrEMBL
Match: A0A6P4PK13 (uncharacterized protein LOC108478946 isoform X1 OS=Gossypium arboreum OX=29729 GN=LOC108478946 PE=4 SV=1)

HSP 1 Score: 114 bits (285), Expect = 8.92e-29
Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 28  AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCM 87
           +GLWF+L S  NR+ G ALPQIPK YIRVKDE +T+ MVKKYL+ KLGLSN+AEVE+ CM
Sbjct: 171 SGLWFTLHSYTNRRNGEALPQIPKAYIRVKDENVTIFMVKKYLVRKLGLSNEAEVEISCM 230

Query: 88  GERLLHTQSLKQVRD 102
           G+RL+HTQ+LKQVRD
Sbjct: 231 GQRLVHTQTLKQVRD 245

[Close]

BLAST of Cucsat.G5187 vs. ExPASy TrEMBL
Match: A0A6P3ZLP7 (uncharacterized protein LOC107415739 isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107415739 PE=4 SV=1)

HSP 1 Score: 114 bits (285), Expect = 1.95e-28
Identity = 57/93 (61.29%), Postives = 74/93 (79.57%), Query Frame = 0


Query: 19  DYSSIITN-------SAGLWFSLLSSPNRK--GGAALPQIPKPYIRVKDEKMTVLMVKKY 78
           DYSS  +N       ++GLWF+L +S NR+  GG  LPQ+PK YIRVKDE +TV MVKKY
Sbjct: 191 DYSSSSSNIKISTRPNSGLWFTLSASTNREREGGGGLPQVPKAYIRVKDENVTVSMVKKY 250

Query: 79  LLTKLGLSNQAEVELWCMGERLLHTQSLKQVRD 102
           L+ KLGLSN+AE++++CMG++L+HTQSLKQVRD
Sbjct: 251 LVRKLGLSNEAEIDVYCMGQKLVHTQSLKQVRD 283

[Close]

BLAST of Cucsat.G5187 vs. TAIR 10
Match: AT2G30580.1 (DREB2A-interacting protein 2 )

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13
Identity = 33/73 (45.21%), Postives = 52/73 (71.23%), Query Frame = 0


Query: 30  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGE 89
           +WFSL++S N++G A+LPQIP  Y+R++D  + V  ++KYL+ KL L ++ EVE+ CMGE
Sbjct: 310 VWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEITCMGE 369

Query: 90  RLLHTQSLKQVRD 103
            ++ T  L  + D
Sbjct: 370 PVIPTLQLHSLVD 382

[Close]

BLAST of Cucsat.G5187 vs. TAIR 10
Match: AT1G06770.1 (DREB2A-interacting protein 1 )

HSP 1 Score: 72.0 bits (175), Expect = 3.1e-13
Identity = 31/73 (42.47%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 30  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGE 89
           +WFSL++S +++GG +LPQIP  ++R++D   TV  ++KYL+ KL L ++ E+E+ CMGE
Sbjct: 311 VWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEIKCMGE 370

Query: 90  RLLHTQSLKQVRD 103
            ++ T +L  + D
Sbjct: 371 AVIPTLTLYNLVD 383

[Close]

BLAST of Cucsat.G5187 vs. TAIR 10
Match: AT1G06770.2 (DREB2A-interacting protein 1 )

HSP 1 Score: 72.0 bits (175), Expect = 3.1e-13
Identity = 31/73 (42.47%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 30  LWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELWCMGE 89
           +WFSL++S +++GG +LPQIP  ++R++D   TV  ++KYL+ KL L ++ E+E+ CMGE
Sbjct: 197 VWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEIKCMGE 256

Query: 90  RLLHTQSLKQVRD 103
            ++ T +L  + D
Sbjct: 257 AVIPTLTLYNLVD 269

[Close]

BLAST of Cucsat.G5187 vs. TAIR 10
Match: AT5G13250.1 (RING finger protein )

HSP 1 Score: 68.9 bits (167), Expect = 2.6e-12
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 28  AGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQA-EVELWC 87
           +G+WF L +S N+     LPQIPK Y+R+KD KMTV ++ KYL+ KL L +++ +VE+ C
Sbjct: 274 SGIWFLLQASQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQVEIRC 333

Query: 88  MGERLLHTQSLKQVRD 103
            G+ L    +L+ VRD
Sbjct: 334 RGQELEPVLTLQHVRD 349

[Close]

BLAST of Cucsat.G5187 vs. TAIR 10
Match: AT3G23060.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 26  NSAGLWFSLLSSPNRKGGAALPQIPKPYIRVKDEKMTVLMVKKYLLTKLGLSNQAEVELW 85
           N+  +WFSL  S  +     LP I    IRVKD  MTV  +KKYL+ KLGL ++ +VE+W
Sbjct: 361 NNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEIW 420

Query: 86  CMGERLLHTQSLKQVRD 103
              E +  + +L  + D
Sbjct: 421 LRDEPVCSSLTLHNLVD 437

The following BLAST results are available for this feature:

BLAST of Cucsat.G5187 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
G3XKQ9	1.0e-13	44.44	Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1	[more]
Q94AY3	2.0e-12	45.21	E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 ...	[more]
Q9M9Y4	4.3e-12	42.47	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 ...	[more]
Q9LS86	1.4e-07	40.26	Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At...	[more]

BLAST of Cucsat.G5187 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652308.1	7.42e-49	97.59	hypothetical protein Csa_022227 [Cucumis sativus]	[more]
XP_022931988.1	1.74e-42	70.80	protein LAX PANICLE 2-like [Cucurbita moschata]	[more]
KAG6571319.1	1.74e-42	70.80	Protein LAX PANICLE 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_039026197.1	3.98e-29	66.28	protein LAX PANICLE 2-like [Hibiscus syriacus]	[more]
XP_017971263.1	9.49e-29	65.48	PREDICTED: uncharacterized protein LOC18612903 isoform X1 [Theobroma cacao]	[more]

BLAST of Cucsat.G5187 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F0B3	8.41e-43	70.80	protein LAX PANICLE 2-like OS=Cucurbita moschata OX=3662 GN=LOC111438321 PE=4 SV...	[more]
A0A5D2F0S3	8.39e-29	72.00	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A10G186800v1 PE=...	[more]
A0A5D2XMI8	8.39e-29	72.00	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A10G171700v1 P...	[more]
A0A6P4PK13	8.92e-29	72.00	uncharacterized protein LOC108478946 isoform X1 OS=Gossypium arboreum OX=29729 G...	[more]
A0A6P3ZLP7	1.95e-28	61.29	uncharacterized protein LOC107415739 isoform X2 OS=Ziziphus jujuba OX=326968 GN=...	[more]

BLAST of Cucsat.G5187 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30580.1	1.4e-13	45.21	DREB2A-interacting protein 2	[more]
AT1G06770.1	3.1e-13	42.47	DREB2A-interacting protein 1	[more]
AT1G06770.2	3.1e-13	42.47	DREB2A-interacting protein 1	[more]
AT5G13250.1	2.6e-12	46.05	RING finger protein	[more]
AT3G23060.1	1.0e-08	40.26	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 4..102 e-value: 7.2E-10 score: 40.6
None	No IPR available	PANTHER	PTHR47290:SF6	SUBFAMILY NOT NAMED	coord: 20..102
IPR044171	Protein LAX PANICLE 2-like	PANTHER	PTHR47290	RING FINGER PROTEIN	coord: 20..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G5187.T1	Cucsat.G5187.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development