Cucsat.G3020 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3020
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	AAI domain-containing protein
Location	ctg1041: 6614526 .. 6615663 (-)
RNA-Seq Expression	Cucsat.G3020
Synteny	Cucsat.G3020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATAAACACAAGTTTTGCAATTTCTGACACCCATAAAATAAAAAGAGTAGAGATAAACCTCAGAAAATACATAGCTAGTAAGAGAAACAAAAAGTTGCACATTGCATTTGCAAGTGGGTACTGTGTTAGGAAGATAGTGTAAGAAAGCATGAGTTACTCTCAATATAAGCAGCATCACTAGATAGAATATTCATCTTCATTTTAACTTGAGAATTTTATCTGTATTCAAAGATGAAACAGGCGATCTTCAAGCCTCTGGAGTTTCTGGTGTTCATGTTGGCAATTACATCCTTTCTAGGGCAAGCTAAAGCCAAGTTCTGTTCTAACAGTCTAATTTACTCTCTTGTTCAGCTAATTCCTTGTAGGCCTTCACTGTCTCCATTCCACCCTATACCACCAAGTCTTGTCTGTTGCGATGCTATCAAAACTTTAGGCCAGTCTTGTATTTGTGCGTTGTTGGATGCTCCCCCTGTTTCTGGTGTTGATTATAACTTGGCCATGTCTCTGCCTCAGAAATGCGCTGCAAATTTCGAGCCATGTAACTATTTCTCCTTGCTTCTTGATCTCTCTACATTTTTCTAGTTTTTGTGTTGAAGATTCTTGAGAAACTTGGTTTCTAATGCAGGTTTCTAGAAGTTGGGACGATGGTGGGGTGTGTGAAGATGATGAATAACGCTGCTTATGATGTTTAGATAGATGTCATGGTTGGATATATGTTTAAGTTAAGAATAACTATGTTTGTTTCAACTTTGGAATGAGAACGACTTTAGAAATTCTTAGAGGTGCTTCATATCTCATTGGTTGAAAGATGAGTTTGGTGAGTGATGTGAAATGTGAAGTTGAGATTTCTAGTCTTTGACCATTTTATTAGATAATACATAACTTCTTCTCTTTATTGGATTTTACACTAATGAAGATATGCGAGATGGGTAGCATGTCATCCAAATTTATCTAAAACAATATCTATGATGAAGTGTACCAAAAAAGCGAATAAAAAGTATCATTAACGATGATGAGAACATCAATTTAAAATGGGTTATAAGTCGGGAGACTTTCAAAGTTTTAAAAGATAGAATTTAGTTCTTATAGTTGGATAAAACCTCATAAATAGTTTATTGGATAAAAATTTTATAACA

Coding sequence (CDS)

ATGAAACAGGCGATCTTCAAGCCTCTGGAGTTTCTGGTGTTCATGTTGGCAATTACATCCTTTCTAGGGCAAGCTAAAGCCAAGTTCTGTTCTAACAGTCTAATTTACTCTCTTGTTCAGCTAATTCCTTGTAGGCCTTCACTGTCTCCATTCCACCCTATACCACCAAGTCTTGTCTGTTGCGATGCTATCAAAACTTTAGGCCAGTCTTGTATTTGTGCGTTGTTGGATGCTCCCCCTGTTTCTGGTGTTGATTATAACTTGGCCATGTCTCTGCCTCAGAAATGCGCTGCAAATTTCGAGCCATGTTTCTAG

Protein sequence

MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVCCDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF

Homology

[Close]

BLAST of Cucsat.G3020 vs. NCBI nr
Match: KGN45155.1 (hypothetical protein Csa_016316 [Cucumis sativus])

HSP 1 Score: 216 bits (551), Expect = 5.29e-71
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60
           MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC
Sbjct: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60

Query: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104
           CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF
Sbjct: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104

[Close]

BLAST of Cucsat.G3020 vs. NCBI nr
Match: XP_008461263.1 (PREDICTED: protein LIM1-like [Cucumis melo])

HSP 1 Score: 202 bits (514), Expect = 2.34e-65
Identity = 95/104 (91.35%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60
           MKQAIFKPLEFLVF+LAI SFLGQ KAKFCSNSLIYSLVQL+PCRPSLSPFHPIPPS +C
Sbjct: 1   MKQAIFKPLEFLVFILAIASFLGQGKAKFCSNSLIYSLVQLLPCRPSLSPFHPIPPSPLC 60

Query: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104
           C+AI+TLGQSCICALLDAPPVSGVDYNLAMSLPQKCA+NFEPCF
Sbjct: 61  CNAIETLGQSCICALLDAPPVSGVDYNLAMSLPQKCASNFEPCF 104

[Close]

BLAST of Cucsat.G3020 vs. NCBI nr
Match: XP_038900004.1 (non-specific lipid-transfer protein P5-like [Benincasa hispida])

HSP 1 Score: 191 bits (486), Expect = 4.37e-61
Identity = 89/104 (85.58%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60
           MKQA FKPL+FLVFM+AI  FL Q KAKFCSNSLI SLVQLIPCRP+LSPFHPIPPS++C
Sbjct: 1   MKQANFKPLQFLVFMMAIACFLEQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSILC 60

Query: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104
           C+AIKTLGQSC+CALLDAPPVSGVDYNLAMSLPQKCA NF+PCF
Sbjct: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPCF 104

[Close]

BLAST of Cucsat.G3020 vs. NCBI nr
Match: XP_023514059.1 (putative lipid-transfer protein DIR1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173 bits (439), Expect = 6.45e-54
Identity = 78/104 (75.00%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60
           MK   FKPL+FLVFM+A+T F+ Q+KAKFCSNSLI +LVQLIPC+PSLSPF P+PPSL+C
Sbjct: 1   MKPGSFKPLQFLVFMIAMTCFVEQSKAKFCSNSLISTLVQLIPCKPSLSPFSPMPPSLLC 60

Query: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104
           C A+KTLGQ C+CA+LDAPPVSG+DYN+AM LPQKCA NF PCF
Sbjct: 61  CHALKTLGQPCLCAVLDAPPVSGIDYNVAMLLPQKCALNFHPCF 104

[Close]

BLAST of Cucsat.G3020 vs. NCBI nr
Match: XP_023004704.1 (putative lipid-transfer protein DIR1 [Cucurbita maxima] >KAG6593320.1 hypothetical protein SDJN03_12796, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171 bits (433), Expect = 5.31e-53
Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60
           MK   FKPL+FLVFM+A+T F+  +KAKFCSNSLI +LVQLIPC+PSLSPF P+PPSL+C
Sbjct: 1   MKPGSFKPLQFLVFMIAMTCFVEPSKAKFCSNSLISTLVQLIPCKPSLSPFSPMPPSLLC 60

Query: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104
           C A+KTLGQ C+CA+LDAPPVSG+DYN+AM LPQKCA NF PCF
Sbjct: 61  CHALKTLGQPCLCAVLDAPPVSGIDYNVAMLLPQKCALNFHPCF 104

[Close]

BLAST of Cucsat.G3020 vs. ExPASy TrEMBL
Match: A0A0A0K635 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428920 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 2.56e-71
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60
           MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC
Sbjct: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60

Query: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104
           CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF
Sbjct: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104

[Close]

BLAST of Cucsat.G3020 vs. ExPASy TrEMBL
Match: A0A1S3CEQ8 (protein LIM1-like OS=Cucumis melo OX=3656 GN=LOC103499902 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 1.13e-65
Identity = 95/104 (91.35%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60
           MKQAIFKPLEFLVF+LAI SFLGQ KAKFCSNSLIYSLVQL+PCRPSLSPFHPIPPS +C
Sbjct: 1   MKQAIFKPLEFLVFILAIASFLGQGKAKFCSNSLIYSLVQLLPCRPSLSPFHPIPPSPLC 60

Query: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104
           C+AI+TLGQSCICALLDAPPVSGVDYNLAMSLPQKCA+NFEPCF
Sbjct: 61  CNAIETLGQSCICALLDAPPVSGVDYNLAMSLPQKCASNFEPCF 104

[Close]

BLAST of Cucsat.G3020 vs. ExPASy TrEMBL
Match: A0A6J1KX32 (putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111497920 PE=4 SV=1)

HSP 1 Score: 171 bits (433), Expect = 2.57e-53
Identity = 77/104 (74.04%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60
           MK   FKPL+FLVFM+A+T F+  +KAKFCSNSLI +LVQLIPC+PSLSPF P+PPSL+C
Sbjct: 1   MKPGSFKPLQFLVFMIAMTCFVEPSKAKFCSNSLISTLVQLIPCKPSLSPFSPMPPSLLC 60

Query: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104
           C A+KTLGQ C+CA+LDAPPVSG+DYN+AM LPQKCA NF PCF
Sbjct: 61  CHALKTLGQPCLCAVLDAPPVSGIDYNVAMLLPQKCALNFHPCF 104

[Close]

BLAST of Cucsat.G3020 vs. ExPASy TrEMBL
Match: V4SWN4 (AAI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10033078mg PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 4.02e-37
Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60
           MK +  K L  L+ +L +TSF+ Q  +  C+N+ I +LVQLIPCRP++SPF PIPPS  C
Sbjct: 1   MKLSGTKALPILLLVLVMTSFMEQGNSHPCANTFISTLVQLIPCRPAVSPFSPIPPSEAC 60

Query: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPC 103
           C+AIK LGQ C+C L++ PP++G+D N+A+ LP KC ANFEPC
Sbjct: 61  CNAIKALGQPCLCVLINGPPIAGIDRNVALQLPDKCIANFEPC 103

[Close]

BLAST of Cucsat.G3020 vs. ExPASy TrEMBL
Match: A0A067H6Y1 (AAI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039389mg PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 6.90e-37
Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60
           MK +  K L  L+ +L +TSF+ Q  +  C+N+ I +LVQLIPCRP++SPF PIPPS  C
Sbjct: 1   MKLSGTKALPILLLVLVMTSFMEQGNSHPCANTFISTLVQLIPCRPAVSPFSPIPPSEAC 60

Query: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPC 103
           C+AIK LGQ C+C L++ PP++G+D N+A+ LP KC ANFEPC
Sbjct: 61  CNAIKALGQPCLCVLINGPPIAGIDRNVALQLPDKCIANFEPC 103

[Close]

BLAST of Cucsat.G3020 vs. TAIR 10
Match: AT3G52130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 2.2e-22
Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 30  CSNSLIYSLVQLIPCRPSLSPFHPIPPSLVCCDAIKTLGQSCICALLDAPPVSGVDYNLA 89
           CS +   +LVQLIPCR +++PF PIPP+ +CC A+ TLG+ C+C L + PP+SG+D ++A
Sbjct: 48  CSRTFFSALVQLIPCRAAVAPFSPIPPTEICCSAVVTLGRPCLCLLANGPPLSGIDRSMA 107

Query: 90  MSLPQKCAANFEPC 104
           + LPQ+C+ANF PC
Sbjct: 108 LQLPQRCSANFPPC 121

[Close]

BLAST of Cucsat.G3020 vs. TAIR 10
Match: AT3G07450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 30  CSNSLIYSLVQLIPCRPSLSPFHPIPPSLVCCDAIKTLGQSCICALLDAPPVSGVDYNLA 89
           C  + + +L+QL+PCRPS++PF  +PP+ +CC AIKTLGQ C+C L   PP+ GVD  LA
Sbjct: 32  CGRTFLSALIQLVPCRPSVAPFSTLPPNGLCCAAIKTLGQPCLCVLAKGPPIVGVDRTLA 91

Query: 90  MSLPQKCAANFEPC 104
           + LP KC+ANF PC
Sbjct: 92  LHLPGKCSANFLPC 105

[Close]

BLAST of Cucsat.G3020 vs. TAIR 10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 7.5e-07
Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 40 QLIPCRPSLSPFHPIPPSLVCCDAIKTLGQSCICALLDAPPVS--GVDYNLAMSLPQKC 97
          +L  C P++S  +P  PSL+CC+A+K    +C+C   ++P +   GVD  LA SLP++C
Sbjct: 35 ELNECLPAVSKNNPTSPSLLCCNALKHADYTCLCGYKNSPWLGSFGVDPKLASSLPKEC 93

The following BLAST results are available for this feature:

BLAST of Cucsat.G3020 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G3020 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45155.1	5.29e-71	100.00	hypothetical protein Csa_016316 [Cucumis sativus]	[more]
XP_008461263.1	2.34e-65	91.35	PREDICTED: protein LIM1-like [Cucumis melo]	[more]
XP_038900004.1	4.37e-61	85.58	non-specific lipid-transfer protein P5-like [Benincasa hispida]	[more]
XP_023514059.1	6.45e-54	75.00	putative lipid-transfer protein DIR1 [Cucurbita pepo subsp. pepo]	[more]
XP_023004704.1	5.31e-53	74.04	putative lipid-transfer protein DIR1 [Cucurbita maxima] >KAG6593320.1 hypothetic...	[more]

BLAST of Cucsat.G3020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K635	2.56e-71	100.00	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428920 PE=4 SV...	[more]
A0A1S3CEQ8	1.13e-65	91.35	protein LIM1-like OS=Cucumis melo OX=3656 GN=LOC103499902 PE=4 SV=1	[more]
A0A6J1KX32	2.57e-53	74.04	putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111497920...	[more]
V4SWN4	4.02e-37	55.34	AAI domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10033078mg...	[more]
A0A067H6Y1	6.90e-37	55.34	AAI domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039389mg PE=...	[more]

BLAST of Cucsat.G3020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52130.1	2.2e-22	54.05	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G07450.1	1.1e-21	55.41	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G48490.1	7.5e-07	40.68	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 28..103 e-value: 1.9E-10 score: 42.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 37..103
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 24..100 e-value: 1.8E-7 score: 31.2
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 1..103
None	No IPR available	PANTHER	PTHR33122:SF33	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3020.T1	Cucsat.G3020.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
molecular_function	GO:0005504	fatty acid binding