Cucsat.G21581 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G21581
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	chromatin remodeling protein EBS
Location	ctg944: 588213 .. 592084 (-)
RNA-Seq Expression	Cucsat.G21581
Synteny	Cucsat.G21581

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTACCAACAAGATCGTTAGAGGTAAACTTAATCACTTCTCTCGTTTTACTTCCAAATCCTTCTCAATGCTGCTTTACCACTCCTGATTTTACTCATTATTCAGCTGGAGATTGTGTTCTCATGCGCCCATCCGAAACTAGTAAGCTCCCCTATGTAGCGCTTGTTGAGAAGATCGAAGCTGATAACCGTAACAACATTAAAGTTCGAGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGTCGGAGGCAGTTCCATGGAGCTAAGGAACTCTTCTTGTCTGACCATTATGACGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTACACTAAGCTTGATAATGTTGGTGCTGAGGATTATTATTCTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTGTGAGTTTTCGCTTCTTTTTTTTTTTTTTTTTTTTTTTGTTGTTTTTGTTCTTGTCTAATCTAATTTGTGATATATTCTGGTGCAAATTCCTTAAATGGGTTTGTTTATTTTCCATTTCCTTGCAGCTATTGCAAATGTGAGATGCCTTACAACCCAGACGATCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTACATCTTCTTGACATTATGGAAACCAACTAATGTTGGCTTTTGTGTATTGAATCCCTGAATTCTTTTGTGTATTTGCACTTTCCAAAGTGAAGTGTTTAAATAAGCAATTGGAGGCTTGAATTTGTTTGTAAAGAGACTATTCAGGGCATGATTAATTGAGAGTGAATTTTGGATAAGTTTTGAGGTGACACTTTTTTTAGACGAACTTTTTGAAAAGAGCACTAGTTTAGTGCTTCTCACTTTTAATTTTAAAATTTTATTTAATTTTTTTTTAGTGTTTTCGGATCTTTCAAAATCACCTTTTGTCATCTGACCAAATATATGAAAATTTTGAAAAGTACTTTTAACTAGTTAAATGTCAGCTTTCTGAAACTCTCCTTAAGTTTATATGATTTAACAAATAAAAATTATTTAATCAAAGATAATGTTCTAGATGCACTGAAATAAATTTTGGCATCAATGGATGCATCATAGCATTATATTAGTCAGTATAGAGATCACCTTAATCAGTTAATTAGCCATTGCTCTATTCATATGTGGAGAAGCTAATAAAGGTTTAAATTCAGTGTGATGTACGGTCTTTTCTTTTATGGGTTGTTAACTGTATCAATGTTGCTAGAAATTGAATGTTGACGTGAACTCTATTCTATTAGTCTATTAGAACATCATAACTTAGTTCTTATTGGAGTGGCTATATTATATCATTCTTTTTTATACTGGAACTATTTAGAGAGTCTCAAACTCAAGAGTTCAGTCAGTCTCAACTATTTATTGTTTTCTGAAACCACAACGCTCTTATGTTGCATTTGGTCTTTAGGTACCATCCTGCTTGTGTAAGTATGACCATCGAGGAAGCAAAAAAATTGGACCATTTTGTGTGTTCTGAATGTGGATCTGATGGGGACATCAAGAAAAATGAGAATGCATTTTCAGCATCACCAGTGGCTGATGGCAAGGTTAGTAACTGTTATCCATGGTTATTAATCTTTTCTATTCACGTCAGATGTTTCTTTCTTTCCTGATGTATTTAAAGATTAACTTAGTAGCTCAAGGACAGACAAGAAGACAAATGAAATACATGCAATATTTAGCATTATTTAATGTTAAATAGCCAGACCTTCAGTTCTGCCCCTTTCCATTCCTTTCAGTCATGTTCTAATTAATTAATTTTGGAGGTTTTTCTTTTGATTAATGTGCCATATGTTTTCCAAAAGCCAGTGTTATGTTTGTTAAACGTCGGCTATTGGGTTTCCTTTTTGCTGATAGTCGATTTGAGATTATCATCTAGTTTCACATGTCTGATAAGTAATCAGATGCTATGGTTAATTATTTGTTTGGTGACTTTATCCTAAACGGTTCATTTAATTTCTTCTGAGAACTTTTACTTAAAACAGTAGGTTTTGTTTAAATTAAAATACATTCATTGGAAATGTTTATATACCAGAATATATGACTTTGTTTTCTGCCTACGCCAAATATTCCTTTTAGCTCAAGAAAATTCATGTGTATCATGTACGATAACAAGAGTTGAGAGTTCTTGTCTGTTTGTTTCATCAGTAAACAAATTGTCTTTTCATAAAATTATGAAAAATCAGTTCCTTATTTTCAAATTTATCAAGTTTAGGCTTTCCCATTTCATATTTGTCAGTTGCTTAGTTGTTTCTATATAATTTTCAACTTTCTAGCCCACGTTGTTGCAAAAGACCCTATGATCCTCTTATAAAAAAAAAAAAAAGGACACTATGATCCATCCAACTAAGGAGGACATCATTCGTTGGGAGACAACTTCCTGAAATTTAAAGGCTCAAAATGTTAAAAGTACTGAAATCTCCCCTACCCCTAGCTCTTGTGGACATAATCATCGCTTTCTTATTTGTCGATGCAAGTACATTATTATCATGACAAACTTTATCATGCTTACCATTTAAACTCAAGCTGTATTGTGTGAGCAAGCTTTTCCAGTAACTTTACAGTTCTTTCTAAGTTCAGACATGTGGGTACATGTAAACTCTGTTACTGATGTACCGAGAGATATAATTTGCAATCTGTGGTCTGAAAAAGATGAATTCTTTGATTTGGGAAGTCATCTATCATCAAACATTAAGATATCTATCTGGTGCTTCCAAATTTTAGATTAAATTTCAAGTTTATTCATTTAACTTGAAAGTTTGCGGATTTCAATTCTGTTTAAACCCTGTCATTTAAAAATGTTTAATTGATCTGTAAACAGTCTATTTTTACCTATCTTTGTGCTTGATAGATGATGGACACGATTCATATTCAACTTTTTTATTATTTATATTTTCGTTTCCAATTTCCAAATCTATATGATATAGAATTCTTACACGACGGTAAGTTTGCAATTTTTAGTTTAATAAATAAGTTCAGAAATGTTGTAAAATGTCCACTTGACAAATATTGCTTTTTTGACACAAAAGTAGACACAAACTTGTAAATTCAAAGCCTGCAGTATTAGATAATCTGCATTTAATTCCTTTTGTATGGATTATTGGTTACAGTTTCGTAGTCATTAGAATTTTGTCCATTATACGACCAATTTCTGAGTATCATTGAAATGATACACATCCATTTTCGCCATTTTATCTCTTACCCTTGTCAAGCTGTTGATAAGTATACTATTAATCTCTATGACAGAAGATGTTTGAGGCAGGTAATAATGAATAAAAGATGGGGAAAATCAACTTCCCTTATTCCGAGAAAACTACTACTCGTGGCTGTAATCTCATCAGTTTCTTTCAATTCTGTTTCTCTAATGAGTTCAACTAACGTAAAGTTCTTAAATGGTTGTAGCTCGAGTCAAAGCGACGGAAGAGATAACCATTTGAGGTGGAATTGTTTGTTGTATTCAACCATGGAAGATGAGGAGAGTTCAATTGTTATTTATGTAGGTGATGTATAGCATAGCTTGGATATTGCTGTGTAAAACTTTTGTGTTCTGTGACTTAATTAAGTTATATATATATGATGTGTGTGTAAGATGTAGTAGTGTAGTAGTAGCGTAGGTAGTAGAGTAGTAGTAGTAGTAGGAGCTCAGGGAGTGTTTCTCCATAAGTATAACAGTTGAGGGTAGTCTTGTTGTATCATTTTGGTAAACTCTCTATTCCGTTTCTGCATTTGGAACCTTTGATGTGATTTATGGGGACACTCGAATAGTGGAAACAGAAATTTTAGAGATTGCTGAAAATTGTCATTTCCTCTTCTCTCT

Coding sequence (CDS)

CTACCAACAAGATCGTTAGAGGTAAACTTAATCACTTCTCTCGTTTTACTTCCAAATCCTTCTCAATGCTGCTTTACCACTCCTGATTTTACTCATTATTCAGCTGGAGATTGTGTTCTCATGCGCCCATCCGAAACTAGTAAGCTCCCCTATGTAGCGCTTGTTGAGAAGATCGAAGCTGATAACCGTAACAACATTAAAGTTCGAGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGTCGGAGGCAGTTCCATGGAGCTAAGGAACTCTTCTTGTCTGACCATTATGACGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTACACTAAGCTTGATAATGTTGGTGCTGAGGATTATTATTCTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTCTATTGCAAATGTGAGATGCCTTACAACCCAGACGATCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTACCATCCTGCTTGTGTAAGTATGACCATCGAGGAAGCAAAAAAATTGGACCATTTTGTGTGTTCTGAATGTGGATCTGATGGGGACATCAAGAAAAATGAGAATGCATTTTCAGCATCACCAGTGGCTGATGGCAAGCTCGAGTCAAAGCGACGGAAGAGATAA

Protein sequence

LPTRSLEVNLITSLVLLPNPSQCCFTTPDFTHYSAGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPVADGKLESKRRKR

Homology

[Close]

BLAST of Cucsat.G21581 vs. ExPASy Swiss-Prot
Match: F4JL28 (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.0e-94
Identity = 156/185 (84.32%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 35  AGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 94
           AGDCVLMRPS+  K PYVA VEKIEAD RNN+KV  RWYYRPEES+GGRRQFHGAKELFL
Sbjct: 33  AGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGGRRQFHGAKELFL 92

Query: 95  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCE 154
           SDH+DVQSAHTIEGKCIVH+FKNYT+L+NVGAEDYY RFEYKAATGAFTPDRVAVYCKCE
Sbjct: 93  SDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCE 152

Query: 155 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPV 214
           MPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKLDHFVC+EC SD D+KK++N F++SP 
Sbjct: 153 MPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQNGFTSSPA 212

Query: 215 ADGKL 220
            D K+
Sbjct: 213 DDVKV 217

[Close]

BLAST of Cucsat.G21581 vs. ExPASy Swiss-Prot
Match: F4JGB7 (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 2.8e-72
Identity = 133/192 (69.27%), Postives = 154/192 (80.21%), Query Frame = 0


Query: 33  YSAGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKEL 92
           ++ GDCVLMRPS+  K PYVA VEKIEAD RNN+KV  RWYY PEES GGRRQ HGAKEL
Sbjct: 40  FTVGDCVLMRPSDAGKAPYVARVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKEL 99

Query: 93  FLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCK 152
           FLSDH+DVQSAHTIEGKCIVH+FKNYT+L+NVG EDYY  F+YKAATGAFTPDRVAVY K
Sbjct: 100 FLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYK 159

Query: 153 CEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGD-IKKNENAFSA 212
           CEMPYN D+LM +   C    H ACV +TIEEAKKL+HFVC EC SD D +K+ +N F++
Sbjct: 160 CEMPYNSDELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFAS 219

Query: 213 SPVADGKLESKR 224
           S   D K  +++
Sbjct: 220 STTNDLKPSAEK 230

[Close]

BLAST of Cucsat.G21581 vs. ExPASy Swiss-Prot
Match: Q9FEN9 (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.3e-68
Identity = 125/189 (66.14%), Postives = 142/189 (75.13%), Query Frame = 0


Query: 36  GDCVLMRPSETSKLPYVALVEKIEADNR-NNIKVRVRWYYRPEESIGGRRQFHGAKELFL 95
           GD VLMR SE  K  YVA VE IE D R ++ KVRVRWYYRPEESIGGRRQFHGAKE+FL
Sbjct: 26  GDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVRVRWYYRPEESIGGRRQFHGAKEVFL 85

Query: 96  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCE 155
           SDH+D QSA TIEGKC VHSF +YTKLD+VG +D++ RFEY + TGAF PDRV V+CKCE
Sbjct: 86  SDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDFFCRFEYNSTTGAFDPDRVTVFCKCE 145

Query: 156 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPV 215
           MPYNPDDLMVQCE C +W+HP+C+  TIEEAKK D+F C EC        N N  S S  
Sbjct: 146 MPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPDNFYCEECSPQQQNLHNSN--STSNN 205

Query: 216 ADGKLESKR 224
            D K+  KR
Sbjct: 206 RDAKVNGKR 212

[Close]

BLAST of Cucsat.G21581 vs. ExPASy Swiss-Prot
Match: Q9P281 (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC1 PE=1 SV=4)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 38/122 (31.15%), Postives = 57/122 (46.72%), Query Frame = 0


Query: 36   GDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 95
            GDC +   +    LPY+  +E +     +N+ V+V+W+Y PEE+  G+RQ  G   L+ S
Sbjct: 2518 GDCAVFLSAGRPNLPYIGRIESMWESWGSNMVVKVKWFYHPEETKLGKRQCDGKNALYQS 2577

Query: 96   DHYDVQSAHTIEGKCIVHSFKNYTKLDNV-----GAEDYYSRFEYKAATGAF-TPDRVAV 152
             H D     TI  KC V + + Y ++          + YY    Y   TG   T D V +
Sbjct: 2578 CHEDENDVQTISHKCQVVAREQYEQMARSRKCQDRQDLYYLAGTYDPTTGRLVTADGVPI 2637

[Close]

BLAST of Cucsat.G21581 vs. ExPASy Swiss-Prot
Match: Q3UHR0 (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahcc1 PE=1 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 40/122 (32.79%), Postives = 57/122 (46.72%), Query Frame = 0


Query: 36   GDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 95
            GDC +   +    LPY+  +E +     +N+ V+V+W+Y PEE+  G+RQ  G   L+ S
Sbjct: 2522 GDCAVFLSAGRPNLPYIGRIESLWESWGSNMVVKVKWFYHPEETKLGKRQSDGKNALYQS 2581

Query: 96   DHYDVQSAHTIEGKCIVHSFKNYTKL----DNVGAED-YYSRFEYKAATGAF-TPDRVAV 152
             H D     TI  KC V   + Y ++         +D YY    Y   TG   T D V V
Sbjct: 2582 CHEDENDVQTISHKCQVVGREQYEQMMRGRKYQDQQDLYYLAGTYDPTTGRLVTADGVPV 2641

[Close]

BLAST of Cucsat.G21581 vs. NCBI nr
Match: XP_004145431.1 (chromatin remodeling protein EBS [Cucumis sativus])

HSP 1 Score: 402 bits (1034), Expect = 8.01e-141
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 35  AGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 94
           AGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL
Sbjct: 25  AGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 84

Query: 95  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCE 154
           SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCE
Sbjct: 85  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCE 144

Query: 155 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPV 214
           MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPV
Sbjct: 145 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPV 204

Query: 215 ADGKLESKRRKR 226
           ADGKLESKRRKR
Sbjct: 205 ADGKLESKRRKR 216

[Close]

BLAST of Cucsat.G21581 vs. NCBI nr
Match: XP_008458992.1 (PREDICTED: chromatin remodeling protein EBS [Cucumis melo])

HSP 1 Score: 391 bits (1005), Expect = 2.11e-136
Identity = 187/191 (97.91%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 36  GDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 95
           GDCVLMRPSETSKLPYVA VEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 96  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCEM 155
           DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY RFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 156 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPVA 215
           PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSD DIKKNENAFSAS VA
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDADIKKNENAFSASSVA 205

Query: 216 DGKLESKRRKR 226
           DGKLESKRRKR
Sbjct: 206 DGKLESKRRKR 216

[Close]

BLAST of Cucsat.G21581 vs. NCBI nr
Match: XP_038895417.1 (chromatin remodeling protein EBS-like isoform X2 [Benincasa hispida])

HSP 1 Score: 387 bits (994), Expect = 1.00e-134
Identity = 185/191 (96.86%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 36  GDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 95
           GDCVLMRPSETSKLPYVA VEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 96  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCEM 155
           DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY RFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 156 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPVA 215
           PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSEC SD DIKKNEN FSASPVA
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECASDADIKKNENTFSASPVA 205

Query: 216 DGKLESKRRKR 226
            GKLESKRRKR
Sbjct: 206 YGKLESKRRKR 216

[Close]

BLAST of Cucsat.G21581 vs. NCBI nr
Match: XP_022142667.1 (chromatin remodeling protein EBS-like [Momordica charantia])

HSP 1 Score: 384 bits (985), Expect = 2.35e-133
Identity = 181/192 (94.27%), Postives = 184/192 (95.83%), Query Frame = 0


Query: 35  AGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 94
           AGDCVLMRPSETS+LPYVA +EKIE DNRNN+KVRVRWYYRPEESIGGRRQFHGAKELFL
Sbjct: 25  AGDCVLMRPSETSRLPYVARIEKIEGDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFL 84

Query: 95  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCE 154
           SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY RFEYKAATGAFTPDRVAVYCKCE
Sbjct: 85  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCE 144

Query: 155 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPV 214
           MPYNPDDLMVQCE CKDWYHPACVSMTIEEAKKLDHFVCSECG D DIKKNEN FSASPV
Sbjct: 145 MPYNPDDLMVQCEVCKDWYHPACVSMTIEEAKKLDHFVCSECGPDADIKKNENTFSASPV 204

Query: 215 ADGKLESKRRKR 226
           ADGKLE KRRKR
Sbjct: 205 ADGKLEPKRRKR 216

[Close]

BLAST of Cucsat.G21581 vs. NCBI nr
Match: XP_022994890.1 (chromatin remodeling protein EBS-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 379 bits (974), Expect = 1.12e-131
Identity = 179/191 (93.72%), Postives = 183/191 (95.81%), Query Frame = 0


Query: 36  GDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 95
           GDCVLMRPSETSKLPYVA +EKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 96  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCEM 155
           DHYDVQSAHTIEG+C VHSFKNYTKL+NVGAEDYY RFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 156 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPVA 215
           PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSEC SD DIK NEN FSASPVA
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECASDADIKTNENTFSASPVA 205

Query: 216 DGKLESKRRKR 226
           D KLESKR+KR
Sbjct: 206 DSKLESKRQKR 216

[Close]

BLAST of Cucsat.G21581 vs. ExPASy TrEMBL
Match: A0A0A0M145 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701230 PE=4 SV=1)

HSP 1 Score: 402 bits (1034), Expect = 3.88e-141
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 35  AGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 94
           AGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL
Sbjct: 25  AGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 84

Query: 95  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCE 154
           SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCE
Sbjct: 85  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCE 144

Query: 155 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPV 214
           MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPV
Sbjct: 145 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPV 204

Query: 215 ADGKLESKRRKR 226
           ADGKLESKRRKR
Sbjct: 205 ADGKLESKRRKR 216

[Close]

BLAST of Cucsat.G21581 vs. ExPASy TrEMBL
Match: A0A1S3C959 (chromatin remodeling protein EBS OS=Cucumis melo OX=3656 GN=LOC103498243 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 1.02e-136
Identity = 187/191 (97.91%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 36  GDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 95
           GDCVLMRPSETSKLPYVA VEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 96  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCEM 155
           DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY RFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 156 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPVA 215
           PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSD DIKKNENAFSAS VA
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDADIKKNENAFSASSVA 205

Query: 216 DGKLESKRRKR 226
           DGKLESKRRKR
Sbjct: 206 DGKLESKRRKR 216

[Close]

BLAST of Cucsat.G21581 vs. ExPASy TrEMBL
Match: A0A6J1CNI2 (chromatin remodeling protein EBS-like OS=Momordica charantia OX=3673 GN=LOC111012722 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 1.14e-133
Identity = 181/192 (94.27%), Postives = 184/192 (95.83%), Query Frame = 0


Query: 35  AGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 94
           AGDCVLMRPSETS+LPYVA +EKIE DNRNN+KVRVRWYYRPEESIGGRRQFHGAKELFL
Sbjct: 25  AGDCVLMRPSETSRLPYVARIEKIEGDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFL 84

Query: 95  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCE 154
           SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY RFEYKAATGAFTPDRVAVYCKCE
Sbjct: 85  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCE 144

Query: 155 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPV 214
           MPYNPDDLMVQCE CKDWYHPACVSMTIEEAKKLDHFVCSECG D DIKKNEN FSASPV
Sbjct: 145 MPYNPDDLMVQCEVCKDWYHPACVSMTIEEAKKLDHFVCSECGPDADIKKNENTFSASPV 204

Query: 215 ADGKLESKRRKR 226
           ADGKLE KRRKR
Sbjct: 205 ADGKLEPKRRKR 216

[Close]

BLAST of Cucsat.G21581 vs. ExPASy TrEMBL
Match: A0A6J1K2K9 (chromatin remodeling protein EBS-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490482 PE=4 SV=1)

HSP 1 Score: 379 bits (974), Expect = 5.41e-132
Identity = 179/191 (93.72%), Postives = 183/191 (95.81%), Query Frame = 0


Query: 36  GDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 95
           GDCVLMRPSETSKLPYVA +EKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 96  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCEM 155
           DHYDVQSAHTIEG+C VHSFKNYTKL+NVGAEDYY RFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 156 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPVA 215
           PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSEC SD DIK NEN FSASPVA
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECASDADIKTNENTFSASPVA 205

Query: 216 DGKLESKRRKR 226
           D KLESKR+KR
Sbjct: 206 DSKLESKRQKR 216

[Close]

BLAST of Cucsat.G21581 vs. ExPASy TrEMBL
Match: A0A6J1GS18 (chromatin remodeling protein EBS-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456995 PE=4 SV=1)

HSP 1 Score: 377 bits (969), Expect = 3.12e-131
Identity = 177/191 (92.67%), Postives = 183/191 (95.81%), Query Frame = 0


Query: 36  GDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 95
           GDCVLMRPSETSKLPYVA +EKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 96  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCEM 155
           DHYDVQSAHTIEG+C VHSFKNYTKL+NVGAEDYY RFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 156 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPVA 215
           PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKL+HFVCSEC SD D+K NEN FSASPVA
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEHFVCSECASDADVKTNENTFSASPVA 205

Query: 216 DGKLESKRRKR 226
           D KLESKR+KR
Sbjct: 206 DSKLESKRQKR 216

The following BLAST results are available for this feature:

BLAST of Cucsat.G21581 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JL28	2.0e-94	84.32	Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=...	[more]
F4JGB7	2.8e-72	69.27	Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04...	[more]
Q9FEN9	3.3e-68	66.14	Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=...	[more]
Q9P281	2.0e-09	31.15	BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC...	[more]
Q3UHR0	2.0e-09	32.79	BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahc...	[more]

BLAST of Cucsat.G21581 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145431.1	8.01e-141	100.00	chromatin remodeling protein EBS [Cucumis sativus]	[more]
XP_008458992.1	2.11e-136	97.91	PREDICTED: chromatin remodeling protein EBS [Cucumis melo]	[more]
XP_038895417.1	1.00e-134	96.86	chromatin remodeling protein EBS-like isoform X2 [Benincasa hispida]	[more]
XP_022142667.1	2.35e-133	94.27	chromatin remodeling protein EBS-like [Momordica charantia]	[more]
XP_022994890.1	1.12e-131	93.72	chromatin remodeling protein EBS-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Cucsat.G21581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M145	3.88e-141	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701230 PE=4 SV=1	[more]
A0A1S3C959	1.02e-136	97.91	chromatin remodeling protein EBS OS=Cucumis melo OX=3656 GN=LOC103498243 PE=4 SV...	[more]
A0A6J1CNI2	1.14e-133	94.27	chromatin remodeling protein EBS-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1K2K9	5.41e-132	93.72	chromatin remodeling protein EBS-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GS18	3.12e-131	92.67	chromatin remodeling protein EBS-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001025	Bromo adjacent homology (BAH) domain	SMART	SM00439	BAH_4	coord: 21..136 e-value: 2.3E-38 score: 143.4
IPR001025	Bromo adjacent homology (BAH) domain	PFAM	PF01426	BAH	coord: 23..135 e-value: 4.6E-20 score: 71.7
IPR001025	Bromo adjacent homology (BAH) domain	PROSITE	PS51038	BAH	coord: 21..136 score: 21.601522
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 140..187 e-value: 5.2E-9 score: 45.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 133..202 e-value: 5.0E-20 score: 72.6
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 140..187 e-value: 5.0E-10 score: 39.1
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 138..189 score: 9.0183
IPR043151	Bromo adjacent homology (BAH) domain superfamily	GENE3D	2.30.30.490		coord: 1..132 e-value: 1.7E-27 score: 98.2
None	No IPR available	PANTHER	PTHR46364	OS08G0421900 PROTEIN	coord: 3..216
None	No IPR available	PANTHER	PTHR46364:SF13	BNAC03G64850D PROTEIN	coord: 3..216
None	No IPR available	CDD	cd04714	BAH_BAHCC1	coord: 22..156 e-value: 2.30564E-56 score: 173.742
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 141..186
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 132..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G21581.T5	Cucsat.G21581.T5	mRNA
Cucsat.G21581.T1	Cucsat.G21581.T1	mRNA
Cucsat.G21581.T3	Cucsat.G21581.T3	mRNA
Cucsat.G21581.T2	Cucsat.G21581.T2	mRNA
Cucsat.G21581.T4	Cucsat.G21581.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0046872	metal ion binding