Cucsat.G19536 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G19536
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	flowering locus K homology domain
Location	ctg4: 1909157 .. 1915361 (-)
RNA-Seq Expression	Cucsat.G19536
Synteny	Cucsat.G19536

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTTTCTTTATAAAATTAAAGGAAAGAGAGAAAAAAAAGAGGAAAAGGCTAATGAGATAAAATCCACCGGCTTTGTCTTCCATTGTGGTCGCAAGCCTTCTTCCGCCTCTCTCTCTCTCTCCCTCTCTCTCTCTTCAAATCTCTAAAACCCTAGAAGCCCCCATTCGATTTTCAAGTTCAAATTACTCATTTCTCTCATTCTTCTTCTACTTCTCATCGCTTCTTCTATAGGTATGCCAAAATCAGCTTGCTTCCTTGCTTTCTGAATTATATACATATTCAAGGTTTCTTTCTTCCGTACTTTTCTCTTTGGTTGTTCTTGTGCTCTGTTATATATTTCGTTCATATATCGATATATTTCGGGTTAATGTTTGTAATGGAAGTTACGGAATGGCTGTACGTCTTTTTGGGTCTGTATCTTGTTTTTAATACCTTTTTTTTTTCGAACCGCTAGGGTTCAATTCGATGGGGATTAGCCTGGAAGTTTTCTTCTTGTGGGATTTTCTTTATATTTTTTTAATAGTCAAGTTCACCCGCATAGGGTTTTTTTTGTTTTTTTTTTTTTAAATTTCTTTTGGATGGTATGATGTAAGGTGGAAGTTTCTCTGTTGGGAGTCTTGAGGAATGCATGTCTTCTTACTAATTACACTTGTTAATAGGAGTTGAGGCCGGGAGATTTTCTATTGATTGTTTTTTTTTTTTTTGGAATTATACATTGTAATTTTATGCTAATGATGCTCATTATAGGAATTTTGTTTTTAAATTATTATTGTTTTTTTTTTACTGATTTAGGTAGTTTTTTTAAATTTTTTTGCAGTTTAATCTGTAAGAAACACATGGCTGATGTGGAACAGAACTATACGCATGTCGTTGATGATGACCAAGTAGATGAGAATGCACAAATATATGAGAATGCTCAGGTACATGACATTACATTGGAACAGGAAAATGCACAGGAGGTAGAGAACTTGCACGAACTTCAGAATGAACACATACCAGAAACCTTAGAATCTGAGCCAAAACAGGTGCATATTGAGGATCCTCTGACTGTAGTAAGTGAGAAGAAGTGGCCTGGATGGCCAGGGGAGAGTGTTTTTCGAATGTTGGTTCCTGCCCAAAAGGTTGGTAGTATAATTGGTCGGAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAAACGAGAGCTCGGATTAAAATTCTTGACGGTCCTCCCGGAACAGCAGAAAGAGCTGTAAGTATCCCCCTTCTAGATATAGCTTCATAAATAATAATTTGGACAGTGTTTTGGTGTTATTTATGTGGATTTAGTGAGACAGACTATTTAATATCAAAGTAATGCGACTTACCCAGTTTTATCTTCTTTTGTTATGGATATTAATACTCATTAAAAATTTATTGTCTTAGGTTCTCTTAAGTTTTGTTTTCTCGATATATGTAGCACATTGCATCAAGGTAGGGAAGTACTGTGAATTGCTGCATGGGTTGATTAGCCCAATTTGGCTGGGCATTCAGTTTGAATGATTATTAGCTTTTTTCAGTTAATTGTTTAATATCTTTTGCACTCTTGGTTGTCATATTCAAGCACGTGACATCAATTATATGGCTGTGTAATGTTGGAAACGTGACACTTAAAATCCCTATGAAAATCAGACTATAAAGCATTGACAAAAATTATCGTTAGTAATCTGATTAGAATTTGTACTAAAAGCCATTAAATCGCTGATTAAAACACTTTAAAGTTGGACAATGTTCTAAAGTTCTTGTGAGTCGTAGAACAAACATTTGATTAAATTAAACCAATCGGCACACTTAAAATGGATCTGCTAACACTTAAAATGGATCTGCTAACACTTGTGGGGATGATTGAGCTCTCCATCTCAAAGATGTATGTGCTTCTGCACCCCAATGGTGGGTGTTAAAAGCATGACTCTCTTTCAGCTTTATAACTGCCAAAAGGAAATGTGGGAAGTTAAGATTAACCCTTGAAACGTGCAAAAACAACATTATTAGTCAAGCAAAAAAGAATGTAAGACTAATCCAGGTAATCCCAAAATATGGATACAGTTGCCTTGATTGTTGTAACAAAAAAGTGAATCTGTGCAGGTTGTGTGTTTAAGGCAACGACTCAATCTTCAATAGGATTCCATATTTGAAGAACCAAAGATCCAGATGCGGGGATCAGCACTCAACATTACAAAGTTCTGAAAAGTTGATCTGAATAACACGTATGGAACTTTTGTACCATGAAGCACTGCAATATCTCTGGTAACTTCAGATCTGAAGATTGATGTCAAGATTTCCAACGGGATAATAAATATGAAAAAATGGGAAAAAACATAATGACAAATGTTAAGAGTTAAAAATTTTATTAATCTCAAAGATGCTTATACACGATTAAAGATGTGCTTAAAAAAATTGAGGGACTAAAACTGGCCAGTCAATATCAAATAGAAGTGATATATTTTTGCTTGTGCTTCTATTGTGTCTTTATCAATAACTGGGTCTATAATCCAACAACATATGAAGTAATACTGTGAAAACCAAAACTCATTAATCTAAAAATGAGGAAAACATAATTATATTATATAATTTCTTGAAACATAGAAAACTGATAAATAACCTCCATGTTCAATGGTAGCTTGCAAATTTCATCACTTGCTGCACGGTTTCTTTGGTAGTTACCCTTGTATATGTTTGCAGCCTCTAAGACGTGTCTTGCATAATATATTGGTGGAAGAAATCATTCACCATTTTGGCACTAGCCTTTTCAAATATGTAGTTTGGAAGACCATTTTTAGAATTGTTTGGTCTGCCTACTTTTGGAAATTTTACGATTCTAATTGCAAGGAGCTAAAAAATTTAATTAAGAAGTCAAGCAAGTTGGATGAGGAAGGGTTTGGGCATTTTGTGGGAGATTTCAGTGGAAACTAATATGAATAGTTTTTGAAGGCCATAGTGCTATGTGTTGTGCGTGTACATTTTCTGGCATCTTTATGGTCCTCACTTGCAGATAAAATTAATTTTTCATGGTAGACTAGGAAAATTGGTAAAGGTGATCTTTCTGTTATTTCCAAAATTTTCTATGATTGTATGCACATCACAGTCCATGAGTGCATTTATTATTTGATACAGGTGGAAGTTTGTGTAAGAAAACTGATCTGCTACTGTTAAATTTGTTCTCAGAAGTGTATTTAGTGAAGAAATCACATCTTCAGAAATTTTGGATTGTGATTCTAATTGATGTTATAAGCATTCGGTTATTTCATTGGTTGGGAGTGGGAATTTCATGTGTGTTTCCTGTTGTGGAGCTCACTAGCTGGCACTGAAATTTGATGAATTATCTTTGATTTGCATCTGTTGTTATATGAGCTATTTTGTATCTGTAGAGCAGGGAATTTTAAGTTCTATTATTTCATACTCATTTGAACTTTCCCCTTATGGTTGTTGGTCAACTTGTGAAATTTTTTTAGTTCTAACAAAAGGGGATGCTTCATTTAATAGGTAATGGTGTCTGCAAAGGACGAACCGGATTCTGCTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGCGATAATGCTCATGCTCCCAATGCGGGAAGTAAAGTTTCAACGAGGCTGCTTGTAGCAGCTTCACAAGCAGGAAGTTTAATTGGGAAGCAGGGTGGAACTGTTAAATCCATTCAAGAAGAGTCAAACTGTATAGTTAGAGTTCTTGGATCAGGTGGATTTCTTCAGATGCCATTTGATTTTTTGCTTCAATATTCTTATATTTGTCATGTCTTTATTTTCTTGTATTTCATTTGTTTCTGAATCGATAATTATAGTTTTCCCTTTTCAATGTGTCCCTACCTTTGTCATCCGGGAATTACTGCAGAAGATTTACCTGTTTTTGCTCTCCAAGACGATAGAGTCGTTGAAGTACTAGGTGATCCAGCTGGTGTGCACAAAGCAGTGGAACTCATTGCTTCCCATCTTAGAAAGTTTCTTGTTGATCGAAGTATCATCCCAGTTTTTGAAATGAATGTGAGTGTGATTTCCTAATGATTTTTCAACGTCTTCCATTTTTAGATGTAATGAAGTCTTAACGTTCCTATTCTTCCATCCAATCCAAACGACCAAAAATCAGATGCAGATGTCAAATCCACAGATGGACCAGCACATGCCGCCGCCACCACACCAACCCTGGGGCCCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGGTTTGGACCAAATCCTCCTCAATACATGCCACCACCACCACGACAATTTGACAATTATTATCCACCTGCTGAGATGCAAGCGGTTATGGAAAAGCAGCCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATGCAGCATCAAATGCACAGTCGGCACCATCAATTGTCACTCAGGTCAGATAAGCCTTTGAACTCCTATATTTGAAATGTGATTTTGCAAACTCCTTAAATCTTTGTCCAAAGTAATTCTGATTGTGTGCTTTAAATCTTCTTCAACGTTCTTCAGATTTGCATTTTACCAGTGAATGAGAATACTGAATACCCTTTGGGGACGTGTTGAATATCATAAGATGCTTAGAATGTTTTTTGTTTTACATGCAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCGGATGCTGTAATTGGAACTGCTGGTGCTAGTATTAGCTATATTCGTCGTGCTAGTGGGGCAACTGTTACTATCCAAGAAACAAGGGGAGTCCCTGGGGAAATGACTGTGGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCAGCCCAGCAACTTATACAGGCAATTATTTTTTCTAGTCCTTTTGATTTTACATCTTCCTCTATTATGACGACTTTAGATATGAAGTCAACTTTCAATTAAGAATTCTTTTAGTTCATTTTTTTTCTTGGTTTGATGGATTTGTTGTACTGCGTCAGTTGTGTGGTGACTTGAACACAACTTGGTGTAGATGTGAATCTCATTTCACTAGGGAATCTAGTCGGTGACAATTTTTTTCATTGAAAACTTTTCTCATTGTGAATTAGGCCGGAGAAAAGGTTTTTTCTTTAAAAAAAATGGTTAAAGTATAGGTTTAGCTCATGAACTTTCAGCTTAAAAGTGTCTAGAAACTCTTTAAGTTTCAACTTTGTGTCCAATAGGTTCCAGCGCTTTCCAACACATTACAATGTGTCTGATAAATTCTTGAACTTTAAACTTTCAACTGTGTCCAATAGTTTCCTGAACTCGTCTGAATCATTTTTTAAAGCACATAAAATCCGAATTGTATTTATTCGATCAACTAATTTTTAAAAATGTTGAATATATTCAGATCCATTGGTCATGACACTGATGTTTTTCTTCCAATCCAAGGACCCAAAACAAAATTAAAATTCCAAGAACTTTTTAAAGTTTGGGAGTAAACAGGGGGTTCGAAATCTTACCCCTCGCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAATGGTCTCTCACATTCTATAAGTTCCTTTTTTTCATTCACCTCTATAAGTTTCTGATGGTGTATTCCTTTTTAGACCTGATTAATATTTATTTGAACGCAACATTACTACAGTCGTTAGTGCAATATAAGGCCTTTAAAAATCCTTCAACTGTGATGCAGAATTTTATGGCCGGTGCTGGAGCTCCAGCCCAGCCTCAAGCCGGGGTATCTACAGACCAAGGCTACAACTCATATGCTGCTCATGGTTCGGTGTACGCATCTCCCCCTGCAAACCCTGCAGCTCATGCTGGAGGATATGGCTCTGTCTATGGTACGAATTATGGGTACTAACTAAGCCTTTGGCCACTCGAACCACATCATCATTAGAAAGATTTGTATCATGTAGCCTCCTTTTAAATCATCTTTTTTGAACATACTCTACTTGAACGACTTACAATCATTCTCTAAAATAGCCTATATTTGTGTGGTTTAGCGAATTCAGCGTCTCTGAGATTTTAAGCACCGACTTATTTTTGACTGCATATGATGGATATTTTCAGAGAAGCTCCAATCCAACATTGTCGATTTGAACTTATATGAGAATTAGAGTGTCTAGAGTTCTTTTTATATTCTTAATTGATTTGGTTAAGCTATATCTAATGTGTTGCTCTTTAACTAACCAAACCA

Coding sequence (CDS)

ATGGTGTCTGCAAAGGACGAACCGGATTCTGCTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGCGATAATGCTCATGCTCCCAATGCGGGAAGTAAAGTTTCAACGAGGCTGCTTGTAGCAGCTTCACAAGCAGGAAGTTTAATTGGGAAGCAGGGTGGAACTGTTAAATCCATTCAAGAAGAGTCAAACTGTATAGTTAGAGTTCTTGGATCAGAAGATTTACCTGTTTTTGCTCTCCAAGACGATAGAGTCGTTGAAGTACTAGGTGATCCAGCTGGTGTGCACAAAGCAGTGGAACTCATTGCTTCCCATCTTAGAAAGTTTCTTGTTGATCGAAGTATCATCCCAGTTTTTGAAATGAATATGCAGATGTCAAATCCACAGATGGACCAGCACATGCCGCCGCCACCACACCAACCCTGGGGCCCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGGTTTGGACCAAATCCTCCTCAATACATGCCACCACCACCACGACAATTTGACAATTATTATCCACCTGCTGAGATGCAAGCGGTTATGGAAAAGCAGCCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATGCAGCATCAAATGCACAGTCGGCACCATCAATTGTCACTCAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCGGATGCTGTAATTGGAACTGCTGGTGCTAGTATTAGCTATATTCGTCGTGCTAGTGGGGCAACTGTTACTATCCAAGAAACAAGGGGAGTCCCTGGGGAAATGACTGTGGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCAGCCCAGCAACTTATACAGAATTTTATGGCCGGTGCTGGAGCTCCAGCCCAGCCTCAAGCCGGGGTATCTACAGACCAAGGCTACAACTCATATGCTGCTCATGGTTCGGTGTACGCATCTCCCCCTGCAAACCCTGCAGCTCATGCTGGAGGATATGGCTCTGTCTATGGTACGAATTATGGGTACTAA

Protein sequence

MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY

Homology

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BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 8.5e-124
Identity = 253/354 (71.47%), Postives = 280/354 (79.10%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVS K+EP+S+ PP++DGLLRVH RIVDGL+G+ + AP   SKVSTRLLV ASQAGSLIG
Sbjct: 235 MVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAP-PPSKVSTRLLVPASQAGSLIG 294

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVK+IQE S CIVRVLGSEDLPVFALQDDRVVEV+G+P  VH+A+ELIASHLRKFL
Sbjct: 295 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 354

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIP FE  MQ    QMD HM PPPHQ WGPPQG  P+ GGG G+G NPP YM PPP
Sbjct: 355 VDRSIIPFFENQMQKPTRQMD-HM-PPPHQSWGPPQGHAPSVGGG-GYGHNPPPYMQPPP 414

Query: 181 RQFDNYYPPAEM-QAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPL 240
           R  D+YYPP EM Q  MEKQPH GISAYGRE PM VH +S   + P +  Q TQQMQIPL
Sbjct: 415 RH-DSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS---APPMVAQQVTQQMQIPL 474

Query: 241 SFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFM- 300
           S+ADAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE+SGT SQVQ A QLIQNFM 
Sbjct: 475 SYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMA 534

Query: 301 -AGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 352
            AGA APAQPQ      QGYN YA HGSVYA+ P NP    GGY + Y + YGY
Sbjct: 535 EAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNP---PGGYATDYSSGYGY 577

[Close]

BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.3e-41
Identity = 121/323 (37.46%), Postives = 177/323 (54.80%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVST-RLLVAASQAGSLI 60
           ++S K+EP++   PA+D +LRV +R+    + D+    NAGS  S+ RLLVA++QA +LI
Sbjct: 122 LISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLI 181

Query: 61  GKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKF 120
           GKQG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  HLR+F
Sbjct: 182 GKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRF 241

Query: 121 LVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPP 180
           LVD +++P+FE        Q  Q                 P A             M P 
Sbjct: 242 LVDHTVVPLFEKQYLARVSQTRQE---------------EPLAESKSSLHTISSNLMEPD 301

Query: 181 PRQFDNYYP---PAEMQAVMEKQPHHGISAYGREAPMGV-HAASNAQSAPSIVTQTTQQM 240
                   P     + +     QP  G+S Y ++  +   H+   A+ + + VTQ +Q M
Sbjct: 302 FSLLARREPLFLERDSRVDSRVQP-SGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTM 361

Query: 241 QIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQ 300
           QIP S+A+ +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT SQVQ A+QLIQ
Sbjct: 362 QIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQ 421

Query: 301 NFMAGAGAPAQPQAGVS-TDQGY 318
            F+     P     G +  D GY
Sbjct: 422 EFIINHKEPVSVSGGYARIDSGY 427

[Close]

BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-06
Identity = 81/346 (23.41%), Postives = 139/346 (40.17%), Query Frame = 0


Query: 2   VSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGK 61
           V+A + P+    PA   ++ +  R+ + L  +        S ++ RL+V  SQ G ++GK
Sbjct: 501 VTASENPECQSSPAQKAIMLIFSRLFE-LATNKILDNGPRSSITARLVVPTSQIGCVLGK 560

Query: 62  QGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLV 121
            G  V  +++ +   +++L  E  P    ++D+VV++ G+   V +A+  I S LR  + 
Sbjct: 561 GGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 620

Query: 122 DRSIIPVFEMNM------QMSNPQMDQHMPPPPHQPWGPP----------------QGMP 181
             S+      +       +  + Q D  +    HQ    P                 G  
Sbjct: 621 SNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSH 680

Query: 182 PNAGGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQ--------PHHGISAYGR-- 241
            +       G +P  Y+ P     D + P A       ++         HH   A  R  
Sbjct: 681 SSVNYSRSVGTDP--YIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLW 740

Query: 242 -----EAPMGVHAASNAQSA------------PSIVTQTTQQMQIPLSFADAVIGTAGAS 299
                 AP G+  AS   S+             +IVT TT ++++P +    V G  G +
Sbjct: 741 ASPPPAAPRGLSDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYN 800

[Close]

BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.5e-06
Identity = 69/297 (23.23%), Postives = 131/297 (44.11%), Query Frame = 0


Query: 2   VSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGK 61
           +S+++ PD  F PA + LL +  +I+D +       P+  + ++TRLLV +  +  L GK
Sbjct: 374 ISSEEAPDDPFFPAQEALLHIQTQIIDLI-------PDKDNLITTRLLVPSRDSICLEGK 433

Query: 62  QGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLV 121
             G+V  I   +   V++L  E++P  A  +D V+++ G+     +A           LV
Sbjct: 434 -AGSVSEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREA-----------LV 493

Query: 122 DRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPPR 181
           + +++    M  ++S     +  PP      GP +G+   AG       N        P 
Sbjct: 494 ELTLLLRSHMFKELS----QKETPPASTSTTGPLEGV---AGVMEVASSNNTIQSREGPT 553

Query: 182 QFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLSF 241
             +             K+    ++  G          + ++ A  +VT++T ++ +P + 
Sbjct: 554 SSNLNLQQVSTILPQFKEGFGSVAKAGESEHREEVPVTTSRMAVPLVTRSTLEVVLPEAV 613

Query: 242 ADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFM 299
              ++  +   ++ I   SGA+VTI E R    +  + +SGT  Q + AQ L+Q F+
Sbjct: 614 VPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAERAQSLLQGFI 644

[Close]

BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot
Match: P91277 (Heterogeneous nuclear ribonucleoprotein K homolog OS=Caenorhabditis elegans OX=6239 GN=hrpk-1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.1e-05
Identity = 71/266 (26.69%), Postives = 109/266 (40.98%), Query Frame = 0


Query: 47  RLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVH 106
           R+LV  S AG+LIG+ G  +K ++E+ +  +++             DRV+   G+   V 
Sbjct: 128 RMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTG----CAPGSTDRVLITSGEQKNVL 187

Query: 107 KAVELIASHLRKFLVDRSIIPVF-EMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGG 166
             +E +   L++  +  S  P     N   SN  +  +   P + P G P   P N G  
Sbjct: 188 GIIEEVMKELKEIPIKGSATPYLPAFNYDPSN--ISDYGGFPGNMPAGGP---PNNRGPA 247

Query: 167 PGFGPNPPQYMPPPPRQFDNYYPPAEMQAVME------------KQPHHGISAYGREAPM 226
           P  G   P   P  PR +         Q   E              P + +SA G     
Sbjct: 248 PQRGGQGP---PGGPRSYGGAITQGGGQRSFEAGDFQQFRGGPGPVPGYAMSAPGYPPQQ 307

Query: 227 GVHAASN----AQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQET 286
           G   A N              TT Q+ IP      +IG  G  I+ IR+ SGA +T++++
Sbjct: 308 GQFGAPNNAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQS 367

Query: 287 RGVPGEMTVEMSGTASQVQAAQQLIQ 296
            G P E  + + GT  Q+ +AQ L+Q
Sbjct: 368 NGQP-ERIITIKGTEQQIHSAQYLLQ 380

[Close]

BLAST of Cucsat.G19536 vs. NCBI nr
Match: XP_004139248.1 (flowering locus K homology domain isoform X1 [Cucumis sativus] >XP_031736962.1 flowering locus K homology domain isoform X1 [Cucumis sativus] >KAE8651554.1 hypothetical protein Csa_019400 [Cucumis sativus])

HSP 1 Score: 681 bits (1758), Expect = 1.05e-244
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG
Sbjct: 133 MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 192

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL
Sbjct: 193 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 252

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP
Sbjct: 253 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 312

Query: 181 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 240
           RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS
Sbjct: 313 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 372

Query: 241 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 300
           FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG
Sbjct: 373 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 432

Query: 301 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 351
           AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY
Sbjct: 433 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 483

[Close]

BLAST of Cucsat.G19536 vs. NCBI nr
Match: XP_008456230.1 (PREDICTED: flowering locus K homology domain isoform X1 [Cucumis melo] >KAA0063589.1 flowering locus K-like proteiny domain isoform X1 [Cucumis melo var. makuwa] >TYK18438.1 flowering locus K-like proteiny domain isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 680 bits (1755), Expect = 3.00e-244
Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG
Sbjct: 133 MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 192

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL
Sbjct: 193 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 252

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP
Sbjct: 253 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 312

Query: 181 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 240
           RQFDNYYPPAEMQAVM+KQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS
Sbjct: 313 RQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 372

Query: 241 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 300
           FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG
Sbjct: 373 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 432

Query: 301 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 351
           AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY
Sbjct: 433 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 483

[Close]

BLAST of Cucsat.G19536 vs. NCBI nr
Match: XP_011648742.1 (flowering locus K homology domain isoform X2 [Cucumis sativus])

HSP 1 Score: 675 bits (1741), Expect = 3.91e-242
Identity = 350/351 (99.72%), Postives = 350/351 (99.72%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG
Sbjct: 133 MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 192

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVKSIQEESNCIVRVLGS DLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL
Sbjct: 193 KQGGTVKSIQEESNCIVRVLGS-DLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 252

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP
Sbjct: 253 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 312

Query: 181 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 240
           RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS
Sbjct: 313 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 372

Query: 241 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 300
           FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG
Sbjct: 373 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 432

Query: 301 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 351
           AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY
Sbjct: 433 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 482

[Close]

BLAST of Cucsat.G19536 vs. NCBI nr
Match: XP_008456234.1 (PREDICTED: flowering locus K homology domain isoform X2 [Cucumis melo])

HSP 1 Score: 674 bits (1738), Expect = 1.12e-241
Identity = 349/351 (99.43%), Postives = 350/351 (99.72%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG
Sbjct: 133 MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 192

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVKSIQEESNCIVRVLGS DLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL
Sbjct: 193 KQGGTVKSIQEESNCIVRVLGS-DLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 252

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP
Sbjct: 253 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 312

Query: 181 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 240
           RQFDNYYPPAEMQAVM+KQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS
Sbjct: 313 RQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 372

Query: 241 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 300
           FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG
Sbjct: 373 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 432

Query: 301 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 351
           AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY
Sbjct: 433 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 482

[Close]

BLAST of Cucsat.G19536 vs. NCBI nr
Match: XP_038877255.1 (flowering locus K homology domain isoform X1 [Benincasa hispida] >XP_038877256.1 flowering locus K homology domain isoform X1 [Benincasa hispida] >XP_038877257.1 flowering locus K homology domain isoform X1 [Benincasa hispida])

HSP 1 Score: 640 bits (1652), Expect = 1.60e-228
Identity = 339/356 (95.22%), Postives = 345/356 (96.91%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPN G KVSTRLLVAASQAGSLIG
Sbjct: 133 MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRLLVAASQAGSLIG 192

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVKSIQEESNCIVRVLG+EDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL
Sbjct: 193 KQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 252

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIPVFEMNMQM NPQM+ HMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPP 
Sbjct: 253 VDRSIIPVFEMNMQMQNPQME-HMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPP- 312

Query: 181 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPM-GVHAASNAQSAPSIVT-QTTQQMQIP 240
           RQFDNYYPPAEMQ+VM+KQPHHGISAYGREAPM GVHAASNAQSAPS+VT QTTQQMQIP
Sbjct: 313 RQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMSGVHAASNAQSAPSVVTTQTTQQMQIP 372

Query: 241 LSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFM 300
           LSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFM
Sbjct: 373 LSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFM 432

Query: 301 AGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAG---GYGSVYGTNYGY 351
           AGAGAPAQPQ GVSTDQGYNSYAAHGSVYASPPANPAAHAG   GYG+VYGTNYGY
Sbjct: 433 AGAGAPAQPQTGVSTDQGYNSYAAHGSVYASPPANPAAHAGHAGGYGNVYGTNYGY 486

[Close]

BLAST of Cucsat.G19536 vs. ExPASy TrEMBL
Match: A0A0A0LJ91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010230 PE=4 SV=1)

HSP 1 Score: 681 bits (1758), Expect = 1.31e-244
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG
Sbjct: 159 MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 218

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL
Sbjct: 219 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 278

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP
Sbjct: 279 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 338

Query: 181 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 240
           RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS
Sbjct: 339 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 398

Query: 241 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 300
           FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG
Sbjct: 399 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 458

Query: 301 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 351
           AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY
Sbjct: 459 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 509

[Close]

BLAST of Cucsat.G19536 vs. ExPASy TrEMBL
Match: A0A5D3D4G7 (Flowering locus K-like proteiny domain isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001640 PE=4 SV=1)

HSP 1 Score: 680 bits (1755), Expect = 1.45e-244
Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG
Sbjct: 133 MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 192

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL
Sbjct: 193 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 252

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP
Sbjct: 253 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 312

Query: 181 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 240
           RQFDNYYPPAEMQAVM+KQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS
Sbjct: 313 RQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 372

Query: 241 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 300
           FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG
Sbjct: 373 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 432

Query: 301 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 351
           AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY
Sbjct: 433 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 483

[Close]

BLAST of Cucsat.G19536 vs. ExPASy TrEMBL
Match: A0A1S3C2U6 (flowering locus K homology domain isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496231 PE=4 SV=1)

HSP 1 Score: 680 bits (1755), Expect = 1.45e-244
Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG
Sbjct: 133 MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 192

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL
Sbjct: 193 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 252

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP
Sbjct: 253 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 312

Query: 181 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 240
           RQFDNYYPPAEMQAVM+KQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS
Sbjct: 313 RQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 372

Query: 241 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 300
           FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG
Sbjct: 373 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 432

Query: 301 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 351
           AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY
Sbjct: 433 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 483

[Close]

BLAST of Cucsat.G19536 vs. ExPASy TrEMBL
Match: A0A1S3C3F3 (flowering locus K homology domain isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496231 PE=4 SV=1)

HSP 1 Score: 674 bits (1738), Expect = 5.42e-242
Identity = 349/351 (99.43%), Postives = 350/351 (99.72%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG
Sbjct: 133 MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 192

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVKSIQEESNCIVRVLGS DLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL
Sbjct: 193 KQGGTVKSIQEESNCIVRVLGS-DLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 252

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP
Sbjct: 253 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 312

Query: 181 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 240
           RQFDNYYPPAEMQAVM+KQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS
Sbjct: 313 RQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 372

Query: 241 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 300
           FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG
Sbjct: 373 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 432

Query: 301 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 351
           AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY
Sbjct: 433 AGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY 482

[Close]

BLAST of Cucsat.G19536 vs. ExPASy TrEMBL
Match: A0A6J1CPP3 (flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036 PE=4 SV=1)

HSP 1 Score: 620 bits (1598), Expect = 1.10e-220
Identity = 332/355 (93.52%), Postives = 340/355 (95.77%), Query Frame = 0


Query: 1   MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIG 60
           MVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNAHAP+ G KVSTRLLVAASQAGSLIG
Sbjct: 132 MVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRLLVAASQAGSLIG 191

Query: 61  KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 120
           KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL
Sbjct: 192 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 251

Query: 121 VDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPP 180
           VDRSIIPVFEMNMQMSNPQMD HMPPP HQ WGPPQGMPPNAGGGPGFGPNP QYMPPP 
Sbjct: 252 VDRSIIPVFEMNMQMSNPQMD-HMPPP-HQSWGPPQGMPPNAGGGPGFGPNP-QYMPPP- 311

Query: 181 RQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLS 240
           RQFDNYYPPA+M +VM+KQPHHGISAYGREAPMGVHA+SNAQ+APSIVTQTTQQMQIPLS
Sbjct: 312 RQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQTTQQMQIPLS 371

Query: 241 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 300
           FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG
Sbjct: 372 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAG 431

Query: 301 AGAPAQPQAGVSTDQGYNSYAA-HGSVYASPPANPAAHAG---GYGSVYGTNYGY 351
           AGAPAQ QAG +TDQGYNSYAA HGSVYASPPANPAAHAG   GYGSVYGTNYGY
Sbjct: 432 AGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGSVYGTNYGY 482

The following BLAST results are available for this feature:

BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR13	8.5e-124	71.47	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
Q9SZH4	5.3e-41	37.46	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
F4KDN0	1.1e-06	23.41	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
Q8W4B1	2.5e-06	23.23	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P91277	6.1e-05	26.69	Heterogeneous nuclear ribonucleoprotein K homolog OS=Caenorhabditis elegans OX=6...	[more]

BLAST of Cucsat.G19536 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139248.1	1.05e-244	100.00	flowering locus K homology domain isoform X1 [Cucumis sativus] >XP_031736962.1 f...	[more]
XP_008456230.1	3.00e-244	99.72	PREDICTED: flowering locus K homology domain isoform X1 [Cucumis melo] >KAA00635...	[more]
XP_011648742.1	3.91e-242	99.72	flowering locus K homology domain isoform X2 [Cucumis sativus]	[more]
XP_008456234.1	1.12e-241	99.43	PREDICTED: flowering locus K homology domain isoform X2 [Cucumis melo]	[more]
XP_038877255.1	1.60e-228	95.22	flowering locus K homology domain isoform X1 [Benincasa hispida] >XP_038877256.1...	[more]

BLAST of Cucsat.G19536 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ91	1.31e-244	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010230 PE=4 SV=1	[more]
A0A5D3D4G7	1.45e-244	99.72	Flowering locus K-like proteiny domain isoform X1 OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3C2U6	1.45e-244	99.72	flowering locus K homology domain isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A1S3C3F3	5.42e-242	99.43	flowering locus K homology domain isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1CPP3	1.10e-220	93.52	flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 228..298 e-value: 2.0E-8 score: 44.0 coord: 42..116 e-value: 3.5E-14 score: 63.1
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 231..294 e-value: 3.9E-11 score: 42.6 coord: 46..112 e-value: 4.4E-15 score: 55.2
None	No IPR available	GENE3D	3.30.310.210		coord: 2..121 e-value: 1.4E-17 score: 65.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..178
None	No IPR available	PANTHER	PTHR10288:SF259	POLY(RC)-BINDING-LIKE PROTEIN	coord: 1..328
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 1..328
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 229..293 score: 14.508204
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 43..111 score: 15.032284
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 45..112 e-value: 1.6152E-20 score: 82.1391
None	No IPR available	CDD	cd00105	KH-I	coord: 231..294 e-value: 9.21132E-13 score: 60.6515
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 217..301 e-value: 4.1E-15 score: 57.2
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 219..299
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 36..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G19536.T6	Cucsat.G19536.T6	mRNA
Cucsat.G19536.T7	Cucsat.G19536.T7	mRNA
Cucsat.G19536.T4	Cucsat.G19536.T4	mRNA
Cucsat.G19536.T5	Cucsat.G19536.T5	mRNA
Cucsat.G19536.T2	Cucsat.G19536.T2	mRNA
Cucsat.G19536.T3	Cucsat.G19536.T3	mRNA
Cucsat.G19536.T1	Cucsat.G19536.T1	mRNA
Cucsat.G19536.T8	Cucsat.G19536.T8	mRNA
Cucsat.G19536.T9	Cucsat.G19536.T9	mRNA
Cucsat.G19536.T10	Cucsat.G19536.T10	mRNA
Cucsat.G19536.T11	Cucsat.G19536.T11	mRNA
Cucsat.G19536.T12	Cucsat.G19536.T12	mRNA
Cucsat.G19536.T13	Cucsat.G19536.T13	mRNA
Cucsat.G19536.T14	Cucsat.G19536.T14	mRNA
Cucsat.G19536.T15	Cucsat.G19536.T15	mRNA
Cucsat.G19536.T16	Cucsat.G19536.T16	mRNA
Cucsat.G19536.T18	Cucsat.G19536.T18	mRNA
Cucsat.G19536.T17	Cucsat.G19536.T17	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding