Cucsat.G19536 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAATTTTCTTTATAAAATTAAAGGAAAGAGAGAAAAAAAAGAGGAAAAGGCTAATGAGATAAAATCCACCGGCTTTGTCTTCCATTGTGGTCGCAAGCCTTCTTCCGCCTCTCTCTCTCTCTCCCTCTCTCTCTCTTCAAATCTCTAAAACCCTAGAAGCCCCCATTCGATTTTCAAGTTCAAATTACTCATTTCTCTCATTCTTCTTCTACTTCTCATCGCTTCTTCTATAGGTATGCCAAAATCAGCTTGCTTCCTTGCTTTCTGAATTATATACATATTCAAGGTTTCTTTCTTCCGTACTTTTCTCTTTGGTTGTTCTTGTGCTCTGTTATATATTTCGTTCATATATCGATATATTTCGGGTTAATGTTTGTAATGGAAGTTACGGAATGGCTGTACGTCTTTTTGGGTCTGTATCTTGTTTTTAATACCTTTTTTTTTTCGAACCGCTAGGGTTCAATTCGATGGGGATTAGCCTGGAAGTTTTCTTCTTGTGGGATTTTCTTTATATTTTTTTAATAGTCAAGTTCACCCGCATAGGGTTTTTTTTGTTTTTTTTTTTTTAAATTTCTTTTGGATGGTATGATGTAAGGTGGAAGTTTCTCTGTTGGGAGTCTTGAGGAATGCATGTCTTCTTACTAATTACACTTGTTAATAGGAGTTGAGGCCGGGAGATTTTCTATTGATTGTTTTTTTTTTTTTTGGAATTATACATTGTAATTTTATGCTAATGATGCTCATTATAGGAATTTTGTTTTTAAATTATTATTGTTTTTTTTTTACTGATTTAGGTAGTTTTTTTAAATTTTTTTGCAGTTTAATCTGTAAGAAACACATGGCTGATGTGGAACAGAACTATACGCATGTCGTTGATGATGACCAAGTAGATGAGAATGCACAAATATATGAGAATGCTCAGGTACATGACATTACATTGGAACAGGAAAATGCACAGGAGGTAGAGAACTTGCACGAACTTCAGAATGAACACATACCAGAAACCTTAGAATCTGAGCCAAAACAGGTGCATATTGAGGATCCTCTGACTGTAGTAAGTGAGAAGAAGTGGCCTGGATGGCCAGGGGAGAGTGTTTTTCGAATGTTGGTTCCTGCCCAAAAGGTTGGTAGTATAATTGGTCGGAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAAACGAGAGCTCGGATTAAAATTCTTGACGGTCCTCCCGGAACAGCAGAAAGAGCTGTAAGTATCCCCCTTCTAGATATAGCTTCATAAATAATAATTTGGACAGTGTTTTGGTGTTATTTATGTGGATTTAGTGAGACAGACTATTTAATATCAAAGTAATGCGACTTACCCAGTTTTATCTTCTTTTGTTATGGATATTAATACTCATTAAAAATTTATTGTCTTAGGTTCTCTTAAGTTTTGTTTTCTCGATATATGTAGCACATTGCATCAAGGTAGGGAAGTACTGTGAATTGCTGCATGGGTTGATTAGCCCAATTTGGCTGGGCATTCAGTTTGAATGATTATTAGCTTTTTTCAGTTAATTGTTTAATATCTTTTGCACTCTTGGTTGTCATATTCAAGCACGTGACATCAATTATATGGCTGTGTAATGTTGGAAACGTGACACTTAAAATCCCTATGAAAATCAGACTATAAAGCATTGACAAAAATTATCGTTAGTAATCTGATTAGAATTTGTACTAAAAGCCATTAAATCGCTGATTAAAACACTTTAAAGTTGGACAATGTTCTAAAGTTCTTGTGAGTCGTAGAACAAACATTTGATTAAATTAAACCAATCGGCACACTTAAAATGGATCTGCTAACACTTAAAATGGATCTGCTAACACTTGTGGGGATGATTGAGCTCTCCATCTCAAAGATGTATGTGCTTCTGCACCCCAATGGTGGGTGTTAAAAGCATGACTCTCTTTCAGCTTTATAACTGCCAAAAGGAAATGTGGGAAGTTAAGATTAACCCTTGAAACGTGCAAAAACAACATTATTAGTCAAGCAAAAAAGAATGTAAGACTAATCCAGGTAATCCCAAAATATGGATACAGTTGCCTTGATTGTTGTAACAAAAAAGTGAATCTGTGCAGGTTGTGTGTTTAAGGCAACGACTCAATCTTCAATAGGATTCCATATTTGAAGAACCAAAGATCCAGATGCGGGGATCAGCACTCAACATTACAAAGTTCTGAAAAGTTGATCTGAATAACACGTATGGAACTTTTGTACCATGAAGCACTGCAATATCTCTGGTAACTTCAGATCTGAAGATTGATGTCAAGATTTCCAACGGGATAATAAATATGAAAAAATGGGAAAAAACATAATGACAAATGTTAAGAGTTAAAAATTTTATTAATCTCAAAGATGCTTATACACGATTAAAGATGTGCTTAAAAAAATTGAGGGACTAAAACTGGCCAGTCAATATCAAATAGAAGTGATATATTTTTGCTTGTGCTTCTATTGTGTCTTTATCAATAACTGGGTCTATAATCCAACAACATATGAAGTAATACTGTGAAAACCAAAACTCATTAATCTAAAAATGAGGAAAACATAATTATATTATATAATTTCTTGAAACATAGAAAACTGATAAATAACCTCCATGTTCAATGGTAGCTTGCAAATTTCATCACTTGCTGCACGGTTTCTTTGGTAGTTACCCTTGTATATGTTTGCAGCCTCTAAGACGTGTCTTGCATAATATATTGGTGGAAGAAATCATTCACCATTTTGGCACTAGCCTTTTCAAATATGTAGTTTGGAAGACCATTTTTAGAATTGTTTGGTCTGCCTACTTTTGGAAATTTTACGATTCTAATTGCAAGGAGCTAAAAAATTTAATTAAGAAGTCAAGCAAGTTGGATGAGGAAGGGTTTGGGCATTTTGTGGGAGATTTCAGTGGAAACTAATATGAATAGTTTTTGAAGGCCATAGTGCTATGTGTTGTGCGTGTACATTTTCTGGCATCTTTATGGTCCTCACTTGCAGATAAAATTAATTTTTCATGGTAGACTAGGAAAATTGGTAAAGGTGATCTTTCTGTTATTTCCAAAATTTTCTATGATTGTATGCACATCACAGTCCATGAGTGCATTTATTATTTGATACAGGTGGAAGTTTGTGTAAGAAAACTGATCTGCTACTGTTAAATTTGTTCTCAGAAGTGTATTTAGTGAAGAAATCACATCTTCAGAAATTTTGGATTGTGATTCTAATTGATGTTATAAGCATTCGGTTATTTCATTGGTTGGGAGTGGGAATTTCATGTGTGTTTCCTGTTGTGGAGCTCACTAGCTGGCACTGAAATTTGATGAATTATCTTTGATTTGCATCTGTTGTTATATGAGCTATTTTGTATCTGTAGAGCAGGGAATTTTAAGTTCTATTATTTCATACTCATTTGAACTTTCCCCTTATGGTTGTTGGTCAACTTGTGAAATTTTTTTAGTTCTAACAAAAGGGGATGCTTCATTTAATAGGTAATGGTGTCTGCAAAGGACGAACCGGATTCTGCTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGCGATAATGCTCATGCTCCCAATGCGGGAAGTAAAGTTTCAACGAGGCTGCTTGTAGCAGCTTCACAAGCAGGAAGTTTAATTGGGAAGCAGGGTGGAACTGTTAAATCCATTCAAGAAGAGTCAAACTGTATAGTTAGAGTTCTTGGATCAGGTGGATTTCTTCAGATGCCATTTGATTTTTTGCTTCAATATTCTTATATTTGTCATGTCTTTATTTTCTTGTATTTCATTTGTTTCTGAATCGATAATTATAGTTTTCCCTTTTCAATGTGTCCCTACCTTTGTCATCCGGGAATTACTGCAGAAGATTTACCTGTTTTTGCTCTCCAAGACGATAGAGTCGTTGAAGTACTAGGTGATCCAGCTGGTGTGCACAAAGCAGTGGAACTCATTGCTTCCCATCTTAGAAAGTTTCTTGTTGATCGAAGTATCATCCCAGTTTTTGAAATGAATGTGAGTGTGATTTCCTAATGATTTTTCAACGTCTTCCATTTTTAGATGTAATGAAGTCTTAACGTTCCTATTCTTCCATCCAATCCAAACGACCAAAAATCAGATGCAGATGTCAAATCCACAGATGGACCAGCACATGCCGCCGCCACCACACCAACCCTGGGGCCCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGGTTTGGACCAAATCCTCCTCAATACATGCCACCACCACCACGACAATTTGACAATTATTATCCACCTGCTGAGATGCAAGCGGTTATGGAAAAGCAGCCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATGCAGCATCAAATGCACAGTCGGCACCATCAATTGTCACTCAGGTCAGATAAGCCTTTGAACTCCTATATTTGAAATGTGATTTTGCAAACTCCTTAAATCTTTGTCCAAAGTAATTCTGATTGTGTGCTTTAAATCTTCTTCAACGTTCTTCAGATTTGCATTTTACCAGTGAATGAGAATACTGAATACCCTTTGGGGACGTGTTGAATATCATAAGATGCTTAGAATGTTTTTTGTTTTACATGCAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCGGATGCTGTAATTGGAACTGCTGGTGCTAGTATTAGCTATATTCGTCGTGCTAGTGGGGCAACTGTTACTATCCAAGAAACAAGGGGAGTCCCTGGGGAAATGACTGTGGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCAGCCCAGCAACTTATACAGGCAATTATTTTTTCTAGTCCTTTTGATTTTACATCTTCCTCTATTATGACGACTTTAGATATGAAGTCAACTTTCAATTAAGAATTCTTTTAGTTCATTTTTTTTCTTGGTTTGATGGATTTGTTGTACTGCGTCAGTTGTGTGGTGACTTGAACACAACTTGGTGTAGATGTGAATCTCATTTCACTAGGGAATCTAGTCGGTGACAATTTTTTTCATTGAAAACTTTTCTCATTGTGAATTAGGCCGGAGAAAAGGTTTTTTCTTTAAAAAAAATGGTTAAAGTATAGGTTTAGCTCATGAACTTTCAGCTTAAAAGTGTCTAGAAACTCTTTAAGTTTCAACTTTGTGTCCAATAGGTTCCAGCGCTTTCCAACACATTACAATGTGTCTGATAAATTCTTGAACTTTAAACTTTCAACTGTGTCCAATAGTTTCCTGAACTCGTCTGAATCATTTTTTAAAGCACATAAAATCCGAATTGTATTTATTCGATCAACTAATTTTTAAAAATGTTGAATATATTCAGATCCATTGGTCATGACACTGATGTTTTTCTTCCAATCCAAGGACCCAAAACAAAATTAAAATTCCAAGAACTTTTTAAAGTTTGGGAGTAAACAGGGGGTTCGAAATCTTACCCCTCGCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAATGGTCTCTCACATTCTATAAGTTCCTTTTTTTCATTCACCTCTATAAGTTTCTGATGGTGTATTCCTTTTTAGACCTGATTAATATTTATTTGAACGCAACATTACTACAGTCGTTAGTGCAATATAAGGCCTTTAAAAATCCTTCAACTGTGATGCAGAATTTTATGGCCGGTGCTGGAGCTCCAGCCCAGCCTCAAGCCGGGGTATCTACAGACCAAGGCTACAACTCATATGCTGCTCATGGTTCGGTGTACGCATCTCCCCCTGCAAACCCTGCAGCTCATGCTGGAGGATATGGCTCTGTCTATGGTACGAATTATGGGTACTAACTAAGCCTTTGGCCACTCGAACCACATCATCATTAGAAAGATTTGTATCATGTAGCCTCCTTTTAAATCATCTTTTTTGAACATACTCTACTTGAACGACTTACAATCATTCTCTAAAATAGCCTATATTTGTGTGGTTTAGCGAATTCAGCGTCTCTGAGATTTTAAGCACCGACTTATTTTTGACTGCATATGATGGATATTTTCAGAGAAGCTCCAATCCAACATTGTCGATTTGAACTTATATGAGAATTAGAGTGTCTAGAGTTCTTTTTATATTCTTAATTGATTTGGTTAAGCTATATCTAATGTGTTGCTCTTTAACTAACCAAACCA ATGGTGTCTGCAAAGGACGAACCGGATTCTGCTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGCGATAATGCTCATGCTCCCAATGCGGGAAGTAAAGTTTCAACGAGGCTGCTTGTAGCAGCTTCACAAGCAGGAAGTTTAATTGGGAAGCAGGGTGGAACTGTTAAATCCATTCAAGAAGAGTCAAACTGTATAGTTAGAGTTCTTGGATCAGAAGATTTACCTGTTTTTGCTCTCCAAGACGATAGAGTCGTTGAAGTACTAGGTGATCCAGCTGGTGTGCACAAAGCAGTGGAACTCATTGCTTCCCATCTTAGAAAGTTTCTTGTTGATCGAAGTATCATCCCAGTTTTTGAAATGAATATGCAGATGTCAAATCCACAGATGGACCAGCACATGCCGCCGCCACCACACCAACCCTGGGGCCCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGGTTTGGACCAAATCCTCCTCAATACATGCCACCACCACCACGACAATTTGACAATTATTATCCACCTGCTGAGATGCAAGCGGTTATGGAAAAGCAGCCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATGCAGCATCAAATGCACAGTCGGCACCATCAATTGTCACTCAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCGGATGCTGTAATTGGAACTGCTGGTGCTAGTATTAGCTATATTCGTCGTGCTAGTGGGGCAACTGTTACTATCCAAGAAACAAGGGGAGTCCCTGGGGAAATGACTGTGGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCAGCCCAGCAACTTATACAGAATTTTATGGCCGGTGCTGGAGCTCCAGCCCAGCCTCAAGCCGGGGTATCTACAGACCAAGGCTACAACTCATATGCTGCTCATGGTTCGGTGTACGCATCTCCCCCTGCAAACCCTGCAGCTCATGCTGGAGGATATGGCTCTGTCTATGGTACGAATTATGGGTACTAA MVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAAHAGGYGSVYGTNYGY Homology
BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 8.5e-124 Identity = 253/354 (71.47%), Postives = 280/354 (79.10%), Query Frame = 0
BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.3e-41 Identity = 121/323 (37.46%), Postives = 177/323 (54.80%), Query Frame = 0
BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.1e-06 Identity = 81/346 (23.41%), Postives = 139/346 (40.17%), Query Frame = 0
BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.5e-06 Identity = 69/297 (23.23%), Postives = 131/297 (44.11%), Query Frame = 0
BLAST of Cucsat.G19536 vs. ExPASy Swiss-Prot
Match: P91277 (Heterogeneous nuclear ribonucleoprotein K homolog OS=Caenorhabditis elegans OX=6239 GN=hrpk-1 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 6.1e-05 Identity = 71/266 (26.69%), Postives = 109/266 (40.98%), Query Frame = 0
BLAST of Cucsat.G19536 vs. NCBI nr
Match: XP_004139248.1 (flowering locus K homology domain isoform X1 [Cucumis sativus] >XP_031736962.1 flowering locus K homology domain isoform X1 [Cucumis sativus] >KAE8651554.1 hypothetical protein Csa_019400 [Cucumis sativus]) HSP 1 Score: 681 bits (1758), Expect = 1.05e-244 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
BLAST of Cucsat.G19536 vs. NCBI nr
Match: XP_008456230.1 (PREDICTED: flowering locus K homology domain isoform X1 [Cucumis melo] >KAA0063589.1 flowering locus K-like proteiny domain isoform X1 [Cucumis melo var. makuwa] >TYK18438.1 flowering locus K-like proteiny domain isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 680 bits (1755), Expect = 3.00e-244 Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0
BLAST of Cucsat.G19536 vs. NCBI nr
Match: XP_011648742.1 (flowering locus K homology domain isoform X2 [Cucumis sativus]) HSP 1 Score: 675 bits (1741), Expect = 3.91e-242 Identity = 350/351 (99.72%), Postives = 350/351 (99.72%), Query Frame = 0
BLAST of Cucsat.G19536 vs. NCBI nr
Match: XP_008456234.1 (PREDICTED: flowering locus K homology domain isoform X2 [Cucumis melo]) HSP 1 Score: 674 bits (1738), Expect = 1.12e-241 Identity = 349/351 (99.43%), Postives = 350/351 (99.72%), Query Frame = 0
BLAST of Cucsat.G19536 vs. NCBI nr
Match: XP_038877255.1 (flowering locus K homology domain isoform X1 [Benincasa hispida] >XP_038877256.1 flowering locus K homology domain isoform X1 [Benincasa hispida] >XP_038877257.1 flowering locus K homology domain isoform X1 [Benincasa hispida]) HSP 1 Score: 640 bits (1652), Expect = 1.60e-228 Identity = 339/356 (95.22%), Postives = 345/356 (96.91%), Query Frame = 0
BLAST of Cucsat.G19536 vs. ExPASy TrEMBL
Match: A0A0A0LJ91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010230 PE=4 SV=1) HSP 1 Score: 681 bits (1758), Expect = 1.31e-244 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
BLAST of Cucsat.G19536 vs. ExPASy TrEMBL
Match: A0A5D3D4G7 (Flowering locus K-like proteiny domain isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001640 PE=4 SV=1) HSP 1 Score: 680 bits (1755), Expect = 1.45e-244 Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0
BLAST of Cucsat.G19536 vs. ExPASy TrEMBL
Match: A0A1S3C2U6 (flowering locus K homology domain isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496231 PE=4 SV=1) HSP 1 Score: 680 bits (1755), Expect = 1.45e-244 Identity = 350/351 (99.72%), Postives = 351/351 (100.00%), Query Frame = 0
BLAST of Cucsat.G19536 vs. ExPASy TrEMBL
Match: A0A1S3C3F3 (flowering locus K homology domain isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496231 PE=4 SV=1) HSP 1 Score: 674 bits (1738), Expect = 5.42e-242 Identity = 349/351 (99.43%), Postives = 350/351 (99.72%), Query Frame = 0
BLAST of Cucsat.G19536 vs. ExPASy TrEMBL
Match: A0A6J1CPP3 (flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036 PE=4 SV=1) HSP 1 Score: 620 bits (1598), Expect = 1.10e-220 Identity = 332/355 (93.52%), Postives = 340/355 (95.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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