Cucsat.G1942 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G1942
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Ras-related protein Rab-2A
Location	ctg1002: 4489628 .. 4492319 (-)
RNA-Seq Expression	Cucsat.G1942
Synteny	Cucsat.G1942

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTTAAAATGATGGAAAATAAAATGTTAATTTAATAATTAAAAATATGAAATTTGAAACTTAATTTGGGTTGATCGTATTGCGATTCATCCTCTCTTTATACTTCACTCGCTTTCTCCTTCTTTCATTGTGAATTGCTCTATGTTTCTCTGTTTTTGCATAAATTCAGACCATAATCTTTGGATTTAATCACTGTATTCTATTTCTGAAGCAGATCCGGCCGGAAAAAAATGTCGTATGCCTACCTATTCAAGTATATCGTCATCGGCGATACCGGTACGTCTCTCACTACTCAATCAGTTTTCTCAAGATCGCTTTCCATTTATGGTGTCTTCTGCTTTCTTTTTTCAATACCATAAACATCCCTTTTTTTCTCTTCAGGAGTTGGAAAATCGTGTCTTCTCCTTCAGTTCACGGATAATCGATTTCAGCCTGTTCATGACTTAACTATCGGGGTCGAATTCGGAGCCAGGATGATCACGATTGAGAATAAGCCAATTAAGCTCCAGATTTGGGATACTGTATGTTCCAATTTTGGTTTATATATTTTTATGTTACTGTCAATTGATTTTGATTATGCCTTTATTCCTTTCTGTTGTGTCACTTTCTTACAGCAGTTTTAGACTCTCTGCTTCAGTGTGATCTTTTAGGTAACTTTTCAATTTTTAGCCACTCAATCACTTTGCATTGGAGTTTTCAAAAGATGCTGTCCTTCTCCTTGTCAATTTATGGTGTCAACTGTCTTTTGTTATTTTCTTTTAGTGGGATCTTCGTTCATATTGTAATTGGAGCCAAACTTAGTAACCTCCTCTTTGTCCTTACTTTCTTAAAGTGTGCCCTTTCTGTTGTCCTCTTTATGATATATTTAACAATTAAGTTTAACAATTTTGGAGCTGGGTATTCGAATCATTAACCTTTAGAATAGAAATAGACACCTTACCGTGTAGCTAGGACTTTTTCTTTTTGGCACCTAGAATGAAATTTGACCATGTTTTGGAATCTAGGAATAATCATCATCTAACCCATGAAAATTGTTGCATTAGCACGTGGTCAAGGTTAATCCCACTTTGACAATCATCAGCGTGTATTTGGTTAGGAATAGGGTGGCCTCTTTTCTAATTGATAAGGCCGGCTAAGATACTGTTAACACAGTTCTAAATGTTAAGGTTTGTATGATTGTAACAGGCCGGCCAAGAGTCATTCAGGTCCATTACAAGGTCCTACTATAGAGGTGCTGCCGGTGCCTTGCTTGTCTATGATATTACCAGGTCTTATTTTTGTTTCTTTTTCTTCTTGAATGACTAACTAATCTGCAAATGCAAAGTTCTTTTTCACTTCATCTTGATAATGCTGGATCTTTACATGCATCCTTGAATGATTAAAGAGATGGGACTTGTCATCATTCGGTTCTTTGAAATCTGTTGGAAATGGATGTCCTATTGGATTCTTAATGTGAAGTTTTTCATTCTAATATATCCTTACCGAGCTGATTATTTACACGAGAATTGTGTTCACTGCGTTATTCAGAAGGGAGACTTTCAATCACTTGATTAGCTGGTTAGAAGATGCAAGGCAGCATGCAAACGCAAACATGACAATTATGCTAATTGGTAATAAGAGTGATCTTGCTCATAGAAGGGCTGTGAGCACAGAAGAGGGCGAACTGTTTGCAAAGGAGCATGGTTTAATATTCATGGAGGCATCTGCCAAAACTGCCCAGAATGTTGAAGAGGTGACTACATAAAATATGCTTATGCTGAAGTACTTAGAAGCATAACGAGACTTGTTTGGGTGGAAATTTTATAGTATACTAAAAACATTTAAGAAATTCAATCACTCTAAATATGACAAGCACCCCATTTTCAGGCATTCGTAAAGACAGCCGCAACCATATTCAAGAAGATTCAAGATGGAGTATTTGATGTTTCAAATGAGGTAAACATCTATCTCATATCTTTTCTACTTCTTAAAGTTCCACGTACATAGATGACAAATTCGTGATTCGTTATCATAACACTGAACTAAAATGCTAATGTTTTTAACCTAAACAAACCAAAAACATCAAGAGTATATTCTACTTCCTATTGTGCATTATGCACATGGAATGCTGTCACTGACGCTGCATTTTTTATCATCCTCAGTCTTATGGAATCAAAGTTGGATATGGTGGGATTCCGGGACCGTCAGGCAGCAGAGAGGGATCATCTGCCCAAGCTGGCGGCTGTTGCAGTTGAACCATGAGATTATAGAAACTAAGCTGGCTTCAACAATCTGTTTGTGCCTGCCTTAATTCATTTCATTCTTTCATTCTTTTTCATTTTTCCTCATGTGCTGCTGTGAAATGTGAATATCCCCTCCCCCTTCCCAACCAAAAAAAGAGTAGAAGAAGCTTTTGTGTTAAAAGAAAAAGGCATTTTCTTTTAATGCTACATTTTCACTCTGCAGTCAATTCAACTGTAAATCAACATTGTTTTGAATTCATTAGTTCTTTTGGTGAAGAACCTTTAGCACCATTTCTTCATATTCGTTGTTTTTTTGTTCAATAAATGCGATGATGACAGGGTTCTTACTTTGATTTTCAATCTCAAGAAACATAAGTGTGGTGTCGTATCATTGAGCTATATTTTGCTTGTCATACTTTTAGCACGATAAAGGGTAGATGGATCCGAAATTCAAACCTTTTGGTCATTC

Coding sequence (CDS)

ATGTCGTATGCCTACCTATTCAAGTATATCGTCATCGGCGATACCGGAGTTGGAAAATCGTGTCTTCTCCTTCAGTTCACGGATAATCGATTTCAGCCTGTTCATGACTTAACTATCGGGGTCGAATTCGGAGCCAGGATGATCACGATTGAGAATAAGCCAATTAAGCTCCAGATTTGGGATACTGCCGGCCAAGAGTCATTCAGGTCCATTACAAGGTCCTACTATAGAGGTGCTGCCGGTGCCTTGCTTGTCTATGATATTACCAGAAGGGAGACTTTCAATCACTTGATTAGCTGGTTAGAAGATGCAAGGCAGCATGCAAACGCAAACATGACAATTATGCTAATTGGTAATAAGAGTGATCTTGCTCATAGAAGGGCTGTGAGCACAGAAGAGGGCGAACTGTTTGCAAAGGAGCATGGTTTAATATTCATGGAGGCATCTGCCAAAACTGCCCAGAATGTTGAAGAGGCATTCGTAAAGACAGCCGCAACCATATTCAAGAAGATTCAAGATGGAGTATTTGATGTTTCAAATGAGTCTTATGGAATCAAAGTTGGATATGGTGGGATTCCGGGACCGTCAGGCAGCAGAGAGGGATCATCTGCCCAAGCTGGCGGCTGTTGCAGTTGA

Protein sequence

MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNESYGIKVGYGGIPGPSGSREGSSAQAGGCCS

Homology

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BLAST of Cucsat.G1942 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 3.8e-111
Identity = 197/210 (93.81%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
            DLAHRRAVSTEEGE FAKEHGLIFMEASAKTAQNVEEAF+KTAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCC 211
           ESYGIKVGYGGIPGPSG R+GS++Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

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BLAST of Cucsat.G1942 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 3.4e-104
Identity = 190/211 (90.05%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
            DL+HRRAVS EEGE FAKEHGLIFMEASAKTAQNVEEAFVKTA  I+KKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 212
           ESYGIKVGY  IPG SG    SS+Q GGCCS
Sbjct: 181 ESYGIKVGY-AIPGQSGGAGSSSSQGGGCCS 210

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BLAST of Cucsat.G1942 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 375.9 bits (964), Expect = 2.9e-103
Identity = 190/211 (90.05%), Postives = 197/211 (93.36%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
            DL+HRRAVS EEGE FAKEHGLIFMEASAKTAQNVEEAFVKTA  I+KKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 212
           ESYGIKVGY  +PG SG   GSS+Q GGCCS
Sbjct: 181 ESYGIKVGY-VVPGQSGG-AGSSSQGGGCCS 209

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BLAST of Cucsat.G1942 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.1e-97
Identity = 172/210 (81.90%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+T++ +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
            DLAH+RAVS EEG+ FAKEHGL+F+EASA+TAQNVEEAF++TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCC 211
           ES GIK+GYG   G +G R+G+ +Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

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BLAST of Cucsat.G1942 vs. ExPASy Swiss-Prot
Match: Q39570 (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 7.7e-96
Identity = 177/213 (83.10%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMI I+ K IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
            DL HRRAV+TEEGE FAKEHGLIF+E SA+TA NVEEAF+ TA  I+KKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGY-GGIPGPSGSR--EGSSAQAGGCC 211
           ESYGIKVGY GG  GP   +  EG +A++  CC
Sbjct: 181 ESYGIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213

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BLAST of Cucsat.G1942 vs. NCBI nr
Match: XP_004134816.1 (ras-related protein RABB1c [Cucumis sativus] >KGN49016.1 hypothetical protein Csa_003624 [Cucumis sativus])

HSP 1 Score: 419 bits (1078), Expect = 7.14e-148
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
           SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
           ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211

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BLAST of Cucsat.G1942 vs. NCBI nr
Match: XP_008440951.1 (PREDICTED: ras-related protein RABB1c-like [Cucumis melo] >KAA0025592.1 ras-related protein RABB1c-like [Cucumis melo var. makuwa] >TYK12467.1 ras-related protein RABB1c-like [Cucumis melo var. makuwa])

HSP 1 Score: 414 bits (1065), Expect = 6.85e-146
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
           SDLAHRRAV+TEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVTTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCC 210
           ESYGIKVGYGGIPGPSGSREGSS+Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGSREGSSSQTGGCC 210

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BLAST of Cucsat.G1942 vs. NCBI nr
Match: XP_022926861.1 (ras-related protein RABB1c-like [Cucurbita moschata] >XP_023003336.1 ras-related protein RABB1c-like [Cucurbita maxima] >XP_023518311.1 ras-related protein RABB1c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410 bits (1053), Expect = 4.80e-144
Identity = 203/211 (96.21%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
           SDLAHRRAVSTEEGE FAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
           ESYGIKVGYGGIPGP+G REGSS+Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 211

[Close]

BLAST of Cucsat.G1942 vs. NCBI nr
Match: XP_038883522.1 (ras-related protein RABB1c-like [Benincasa hispida])

HSP 1 Score: 408 bits (1048), Expect = 2.68e-143
Identity = 203/211 (96.21%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
           +DLAHRRAVSTEEGE FAKEHGLIFMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSN
Sbjct: 121 NDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
           ESYGIKVGYGGIPGPSG REGSS+Q  GCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGREGSSSQTAGCCS 211

[Close]

BLAST of Cucsat.G1942 vs. NCBI nr
Match: XP_041024397.1 (ras-related protein RABB1c-like [Juglans microcarpa x Juglans regia])

HSP 1 Score: 405 bits (1040), Expect = 4.44e-142
Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
            DLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAF+KTAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
           ESYGIKVGYGGIPGPSG R+GSS+Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQGGGCCS 211

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BLAST of Cucsat.G1942 vs. ExPASy TrEMBL
Match: A0A0A0KMV2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510340 PE=4 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 3.46e-148
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
           SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
           ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211

[Close]

BLAST of Cucsat.G1942 vs. ExPASy TrEMBL
Match: A0A5A7SKE6 (Ras-related protein RABB1c-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00430 PE=4 SV=1)

HSP 1 Score: 414 bits (1065), Expect = 3.32e-146
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
           SDLAHRRAV+TEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVTTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCC 210
           ESYGIKVGYGGIPGPSGSREGSS+Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGSREGSSSQTGGCC 210

[Close]

BLAST of Cucsat.G1942 vs. ExPASy TrEMBL
Match: A0A1S3B2A4 (ras-related protein RABB1c-like OS=Cucumis melo OX=3656 GN=LOC103485212 PE=4 SV=1)

HSP 1 Score: 414 bits (1065), Expect = 3.32e-146
Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
           SDLAHRRAV+TEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVTTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCC 210
           ESYGIKVGYGGIPGPSGSREGSS+Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGSREGSSSQTGGCC 210

[Close]

BLAST of Cucsat.G1942 vs. ExPASy TrEMBL
Match: A0A6J1KNY2 (ras-related protein RABB1c-like OS=Cucurbita maxima OX=3661 GN=LOC111496973 PE=4 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 2.32e-144
Identity = 203/211 (96.21%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
           SDLAHRRAVSTEEGE FAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
           ESYGIKVGYGGIPGP+G REGSS+Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 211

[Close]

BLAST of Cucsat.G1942 vs. ExPASy TrEMBL
Match: A0A6J1EG19 (ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111433845 PE=4 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 2.32e-144
Identity = 203/211 (96.21%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW
Sbjct: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLVSWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
           SDLAHRRAVSTEEGE FAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSN
Sbjct: 121 SDLAHRRAVSTEEGEQFAKEHGLVFMEASAKTAQNVEEAFVRTAATIFKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
           ESYGIKVGYGGIPGP+G REGSS+Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPAGGREGSSSQVGGCCS 211

[Close]

BLAST of Cucsat.G1942 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 402.1 bits (1032), Expect = 2.7e-112
Identity = 197/210 (93.81%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHANANMTIMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
            DLAHRRAVSTEEGE FAKEHGLIFMEASAKTAQNVEEAF+KTAATI+KKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCC 211
           ESYGIKVGYGGIPGPSG R+GS++Q GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210

[Close]

BLAST of Cucsat.G1942 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 357.5 bits (916), Expect = 7.6e-99
Identity = 172/210 (81.90%), Postives = 191/210 (90.95%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+T++ +PIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NM+IMLIGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
            DLAH+RAVS EEG+ FAKEHGL+F+EASA+TAQNVEEAF++TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCC 211
           ES GIK+GYG   G +G R+G+ +Q GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210

[Close]

BLAST of Cucsat.G1942 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 318.5 bits (815), Expect = 3.9e-87
Identity = 162/211 (76.78%), Postives = 178/211 (84.36%), Query Frame = 0


Query: 1   MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
           MSYAY FKYI+IGDTGVGKSCLLL+FTD RFQ VHDLTIGVEFGA+ ITI+NKPIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHL SWLE+ARQHA+ NMT MLIGNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
            DL  +R VSTEEGE FA+EHGLIFMEASAKTA NVEEAFV+TAATI+K+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 ESYGIKVGYGGIPGPSGSREGSSA-QAGGCC 211
           E        G  PGP G ++ SS+ Q  GCC
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCC 204

[Close]

BLAST of Cucsat.G1942 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-71
Identity = 129/164 (78.66%), Postives = 147/164 (89.63%), Query Frame = 0


Query: 47  MITIENKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQ 106
           M+T++ +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 107 HANANMTIMLIGNKSDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAAT 166
           HAN NM+IMLIGNK DLAH+RAVS EEG+ FAKEHGL+F+EASA+TAQNVEEAF++TAA 
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 167 IFKKIQDGVFDVSNESYGIKVGYGGIPGPSGSREGSSAQAGGCC 211
           I + IQDGVFDVSNES GIK+GYG   G +G R+G+ +Q GGCC
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 164

[Close]

BLAST of Cucsat.G1942 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-49
Identity = 101/214 (47.20%), Postives = 136/214 (63.55%), Query Frame = 0


Query: 3   YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT 62
           Y YLFK ++IGD+GVGKS LL +FT N F      TIGVEF  R + +++K IK QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNKSD 122
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++ +WL++ R H + N+ +ML+GNKSD
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129

Query: 123 LAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNE- 182
           L H  AV TE+ + FA++  L FME SA  A NVE AF +    I   +     + ++E 
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189

Query: 183 ----SYGIKVGYGGIPGPSGSREGSSAQAGGCCS 212
               S G K+  G        ++ S+ + GGCCS
Sbjct: 190 ANVPSKGDKIDIG--------KDVSAVKKGGCCS 215

The following BLAST results are available for this feature:

BLAST of Cucsat.G1942 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92963	3.8e-111	93.81	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
P49104	3.4e-104	90.05	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]
P49103	2.9e-103	90.05	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
Q38922	1.1e-97	81.90	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
Q39570	7.7e-96	83.10	GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=...	[more]

BLAST of Cucsat.G1942 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134816.1	7.14e-148	100.00	ras-related protein RABB1c [Cucumis sativus] >KGN49016.1 hypothetical protein Cs...	[more]
XP_008440951.1	6.85e-146	98.57	PREDICTED: ras-related protein RABB1c-like [Cucumis melo] >KAA0025592.1 ras-rela...	[more]
XP_022926861.1	4.80e-144	96.21	ras-related protein RABB1c-like [Cucurbita moschata] >XP_023003336.1 ras-related...	[more]
XP_038883522.1	2.68e-143	96.21	ras-related protein RABB1c-like [Benincasa hispida]	[more]
XP_041024397.1	4.44e-142	94.79	ras-related protein RABB1c-like [Juglans microcarpa x Juglans regia]	[more]

BLAST of Cucsat.G1942 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMV2	3.46e-148	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510340 PE=4 SV=1	[more]
A0A5A7SKE6	3.32e-146	98.57	Ras-related protein RABB1c-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B2A4	3.32e-146	98.57	ras-related protein RABB1c-like OS=Cucumis melo OX=3656 GN=LOC103485212 PE=4 SV=...	[more]
A0A6J1KNY2	2.32e-144	96.21	ras-related protein RABB1c-like OS=Cucurbita maxima OX=3661 GN=LOC111496973 PE=4...	[more]
A0A6J1EG19	2.32e-144	96.21	ras-related protein RABB1c-like OS=Cucurbita moschata OX=3662 GN=LOC111433845 PE...	[more]

BLAST of Cucsat.G1942 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17170.1	2.7e-112	93.81	RAB GTPase homolog B1C	[more]
AT4G35860.1	7.6e-99	81.90	GTP-binding 2	[more]
AT4G17160.1	3.9e-87	76.78	RAB GTPase homolog B1A	[more]
AT4G35860.2	1.4e-71	78.66	GTP-binding 2	[more]
AT5G45750.1	1.1e-49	47.20	RAB GTPase homolog A1C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..59 e-value: 1.6E-5 score: -40.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..100
None	No IPR available	PANTHER	PTHR47979:SF55	RAS-RELATED PROTEIN RABB1C-LIKE	coord: 1..100
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..100
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..99 score: 12.349978
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..63 e-value: 3.2E-19 score: 71.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..70
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 2..56 e-value: 1.4E-15 score: 57.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..100 score: 9.979862

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G1942.T1	Cucsat.G1942.T1	mRNA
Cucsat.G1942.T3	Cucsat.G1942.T3	mRNA
Cucsat.G1942.T2	Cucsat.G1942.T2	mRNA
Cucsat.G1942.T5	Cucsat.G1942.T5	mRNA
Cucsat.G1942.T4	Cucsat.G1942.T4	mRNA
Cucsat.G1942.T7	Cucsat.G1942.T7	mRNA
Cucsat.G1942.T6	Cucsat.G1942.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding