Cucsat.G18492 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G18492
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Xyloglucan endotransglucosylase/hydrolase
Location	ctg3379: 2750853 .. 2752318 (+)
RNA-Seq Expression	Cucsat.G18492
Synteny	Cucsat.G18492

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCATGACAACTTCTGTTTTGCTGAACTTTCTAATTTCTCTTACCTTTCTCATGTTTTCCTTGGCTTCTAACTTCTTCCAGGACTTTGATATCACATGGGGAGATGGGCGGGCCAAGATTCTTGAGAATGGTGAGCTTTTGACTCTCTCACTTGATAAGGCATCTGGGTCTGGTTTTCAGTCCAAAAGTGAGTATTTGTTTGGTAAAATTGATATGCAGTTGAAGCTTGTCCCTCGTAACTCTGCTGGCACTGTCACCGCCTACTATGTAACTTCACTCTTCACCCCTCCATTTTGGGTTCTTTTATTTTTCTTGAATTTGTTGAAGCATTTTGACTGTTTTGTTGTTACTGTTTGCAGCTTTCCTCAAAAGGGTCGATGTGGGATGAGATTGATTTTGAGTTTTTGGGTAACTTGAGTGGGGAGCCTTACATTCTTCACACCAATGTTTATAGCCAAGGCAAAGGTGATAAAGAACAGCAATTCTACCTTTGGTTTGATCCCACTGCTGATTTTCATACCTATTCTATTCTTTGGAACCCCCAACGAATTATGTAAGCACTACACCAACAATCCTTCTTTTCTCTTCTTATAAACAAACTACAATATCATCCAAAAAAAAAAAACTCAAAAGACAAAACCTAACAAATTCATGTTATCATCCAATTTTATGAGTAATTGTATCTCATGATAAAACATATTACATTTTTTACAAAAGCAACACCACTAGCCAACAAGAACCACGAACTATGCATTGTGAAAAGAAACCGAACTTAAAGAAATTTAGAAATTATAAAAACGGATAAAAGTTCTTATAAAAAACCTCAAAACCAATTTGAGGAATGAATATATTTATAGATTAATTGATGATCGTTGGAAGACTTTTGTACCTTTCTTGGTTCAAATTTGAAGAGATATATTCATTCATAAAAAAGTCCAACTCCTGAAATTGAAGAATGCGAGCTCAAGCAACATGCTATATATTTCAACGGGAGTTTCATCTCCTAGAAAAAACCACATACTAATTCTGCAAGCAGAAGAATAACATGGAAAACAATAGAATTGACAACAGAAACATTACATTGAAATTTGAGAAAAAAACACAAACCATAAAAAAGATAAATACAACCACACTAAAATTTCAGACTAAAGACATAAGCACTTTTCTATAGCGTTTAAAATCCATCCAACACTTTATACGTGTAACAACTGCTTTCTAACATTTTGCCAAAATCCAACACCCATCACATTCATCTTGCATCTTATGCTTCAGCTTCTCAGTGGATGACACACCAATTAGAGAATTCAACAACTCAGAATCAATTGGTGTTCCATTTCCAAAGAAACAACCAATGAGGATATACTCAAGCTTGTGGAATGCTGATAATTGGGCCACAAGAGGTGGGCTTGTGAAGATAGATTGGACCCAAGCCCCATTTGTAGCTTCCTATAGGAACTTCAGTGTT

Coding sequence (CDS)

ATCATGACAACTTCTGTTTTGCTGAACTTTCTAATTTCTCTTACCTTTCTCATGTTTTCCTTGGCTTCTAACTTCTTCCAGGACTTTGATATCACATGGGGAGATGGGCGGGCCAAGATTCTTGAGAATGGTGAGCTTTTGACTCTCTCACTTGATAAGGCATCTGGGTCTGGTTTTCAGTCCAAAAGTGAGTATTTGTTTGGTAAAATTGATATGCAGTTGAAGCTTGTCCCTCGTAACTCTGCTGGCACTGTCACCGCCTACTATCTTTCCTCAAAAGGGTCGATGTGGGATGAGATTGATTTTGAGTTTTTGGGTAACTTGAGTGGGGAGCCTTACATTCTTCACACCAATGTTTATAGCCAAGGCAAAGGTGATAAAGAACAGCAATTCTACCTTTGGTTTGATCCCACTGCTGATTTTCATACCTATTCTATTCTTTGGAACCCCCAACGAATTATCTTCTCAGTGGATGACACACCAATTAGAGAATTCAACAACTCAGAATCAATTGGTGTTCCATTTCCAAAGAAACAACCAATGAGGATATACTCAAGCTTGTGGAATGCTGATAATTGGGCCACAAGAGGTGGGCTTGTGAAGATAGATTGGACCCAAGCCCCATTTGTAGCTTCCTATAGGAACTTCAGTGTT

Protein sequence

IMTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV

Homology

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BLAST of Cucsat.G18492 vs. ExPASy Swiss-Prot
Match: Q38910 (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana OX=3702 GN=XTH23 PE=2 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.3e-93
Identity = 157/203 (77.34%), Postives = 179/203 (88.18%), Query Frame = 0


Query: 15  TFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQL 74
           +F++ S+++NF +D +ITWGDGR +I  NG+LLTLSLDKASGSGFQSK+EYLFGKIDMQ+
Sbjct: 16  SFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQI 75

Query: 75  KLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLW 134
           KLV  NSAGTVTAYYL S GS WDEIDFEFLGNLSG+PY LHTNV++QGKGD+EQQF LW
Sbjct: 76  KLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLW 135

Query: 135 FDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWA 194
           FDPT+DFHTYSILWNPQRIIFSVD TPIREF N ES G  FPK QPMR+YSSLWNA+ WA
Sbjct: 136 FDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWA 195

Query: 195 TRGGLVKIDWTQAPFVASYRNFS 218
           TRGGLVK DW++APF ASYR F+
Sbjct: 196 TRGGLVKTDWSKAPFTASYRGFN 218

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BLAST of Cucsat.G18492 vs. ExPASy Swiss-Prot
Match: Q38907 (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana OX=3702 GN=XTH25 PE=2 SV=2)

HSP 1 Score: 342.8 bits (878), Expect = 2.8e-93
Identity = 156/213 (73.24%), Postives = 179/213 (84.04%), Query Frame = 0


Query: 5   SVLLNFLISLTFLMFSL-ASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKS 64
           S+L    +S T L   + A  F  +FDITWGDGR K+L NGELLTLSLD+ASGSGFQ+K 
Sbjct: 9   SLLFTLTVSTTTLFSPVFAGTFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKK 68

Query: 65  EYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYSQG 124
           EYLFGKIDMQLKLVP NSAGTVTAYYL SKG  WDEIDFEFLGNL+G+PY +HTNVY+QG
Sbjct: 69  EYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTWDEIDFEFLGNLTGDPYTMHTNVYTQG 128

Query: 125 KGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRI 184
           KGD+EQQF+LWFDPTADFHTYS+LWNP  I+F VDD P+REF N + +G+ +PK QPMR+
Sbjct: 129 KGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRL 188

Query: 185 YSSLWNADNWATRGGLVKIDWTQAPFVASYRNF 217
           YSSLWNAD WATRGGLVK DW++APF ASYRNF
Sbjct: 189 YSSLWNADQWATRGGLVKTDWSKAPFTASYRNF 221

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BLAST of Cucsat.G18492 vs. ExPASy Swiss-Prot
Match: P24806 (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana OX=3702 GN=XTH24 PE=1 SV=2)

HSP 1 Score: 341.3 bits (874), Expect = 8.2e-93
Identity = 156/210 (74.29%), Postives = 184/210 (87.62%), Query Frame = 0


Query: 10  FLISLTFLMFSL-ASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFG 69
           F  +L    FS+ A++F  D ++ WG+GR KIL NG+LLTLSLDK+SGSGFQSK+EYLFG
Sbjct: 8   FFTTLLVAAFSVSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFG 67

Query: 70  KIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKE 129
           KIDMQ+KLVP NSAGTVT +YL S+GS WDEIDFEFLGN+SG+PY LHTNVY+QGKGDKE
Sbjct: 68  KIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKE 127

Query: 130 QQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLW 189
           QQF+LWFDPTA+FHTYSILWNPQRII +VDDTPIREF N ES+GV FPK +PMR+Y+SLW
Sbjct: 128 QQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLW 187

Query: 190 NADNWATRGGLVKIDWTQAPFVASYRNFSV 219
           NAD+WATRGGLVK DW++APF+ASYRN  +
Sbjct: 188 NADDWATRGGLVKTDWSKAPFMASYRNIKI 217

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BLAST of Cucsat.G18492 vs. ExPASy Swiss-Prot
Match: Q38857 (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana OX=3702 GN=XTH22 PE=1 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 7.7e-91
Identity = 157/215 (73.02%), Postives = 181/215 (84.19%), Query Frame = 0


Query: 2   MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 61
           M  + LL   +SL  +  S+++NF +D +ITWGDGR +I  NGELLTLSLDK+SGSGFQS
Sbjct: 1   MAITYLLPLFLSL-IITSSVSANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQS 60

Query: 62  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS 121
           K+EYLFGK+ MQ+KLVP NSAGTVT  YL S G+ WDEIDFEFLGN SGEPY LHTNVY+
Sbjct: 61  KNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYT 120

Query: 122 QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 181
           QGKGDKEQQF LWFDPTA+FHTY+ILWNPQRIIF+VD TPIREF N ES+G  FPK +PM
Sbjct: 121 QGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPM 180

Query: 182 RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNF 217
           R+YSSLWNAD+WATRGGLVK DW++APF ASYR F
Sbjct: 181 RMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGF 214

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BLAST of Cucsat.G18492 vs. ExPASy Swiss-Prot
Match: P35694 (Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.5e-89
Identity = 152/211 (72.04%), Postives = 180/211 (85.31%), Query Frame = 0


Query: 6   VLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEY 65
           VL+   I ++ ++ + A +F+QDFD+TWG  RAKI   G+LL+LSLDK SGSGF+SK EY
Sbjct: 13  VLMLVGIVVSTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEY 72

Query: 66  LFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKG 125
           LFG+IDMQLKLV  NSAGTVTAYYLSS+G   DEIDFEFLGNLSG+PYILHTN+++QGKG
Sbjct: 73  LFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKG 132

Query: 126 DKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYS 185
           ++EQQFYLWFDPT +FHTYSI+W PQ IIF VD+TPIR F N+E +GVPFPK QPMRIYS
Sbjct: 133 NREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYS 192

Query: 186 SLWNADNWATRGGLVKIDWTQAPFVASYRNF 217
           SLWNAD+WATRGGLVK DW++APF A YRNF
Sbjct: 193 SLWNADDWATRGGLVKTDWSKAPFTAYYRNF 223

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BLAST of Cucsat.G18492 vs. NCBI nr
Match: CCH26404.1 (xyloglucan endotransglycosylase [Cucumis sativus])

HSP 1 Score: 444 bits (1141), Expect = 4.07e-156
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 2   MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 61
           MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS
Sbjct: 1   MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 60

Query: 62  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS 121
           KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS
Sbjct: 61  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS 120

Query: 122 QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 181
           QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM
Sbjct: 121 QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 180

Query: 182 RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV 218
           RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV
Sbjct: 181 RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV 217

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BLAST of Cucsat.G18492 vs. NCBI nr
Match: XP_004146306.1 (xyloglucan endotransglucosylase/hydrolase protein 24 isoform X1 [Cucumis sativus])

HSP 1 Score: 441 bits (1135), Expect = 3.34e-155
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 2   MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 61
           MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS
Sbjct: 1   MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 60

Query: 62  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS 121
           KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS
Sbjct: 61  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS 120

Query: 122 QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 181
           QGKGDKEQQFYLWFDPT DFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM
Sbjct: 121 QGKGDKEQQFYLWFDPTDDFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 180

Query: 182 RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV 218
           RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV
Sbjct: 181 RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV 217

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BLAST of Cucsat.G18492 vs. NCBI nr
Match: XP_008453623.1 (PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 22-like isoform X1 [Cucumis melo])

HSP 1 Score: 434 bits (1117), Expect = 1.92e-152
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 2   MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 61
           MTTS+LLNFLISLTFLMFS ASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS
Sbjct: 2   MTTSLLLNFLISLTFLMFSSASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 61

Query: 62  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS 121
           KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSS+GSMWDEIDFEFLGNLSGEPYILHTNVYS
Sbjct: 62  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSEGSMWDEIDFEFLGNLSGEPYILHTNVYS 121

Query: 122 QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 181
           QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM
Sbjct: 122 QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 181

Query: 182 RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV 218
           RIYSSLWNADNWATRGGLVK DWTQAPF ASYRNFSV
Sbjct: 182 RIYSSLWNADNWATRGGLVKTDWTQAPFEASYRNFSV 218

[Close]

BLAST of Cucsat.G18492 vs. NCBI nr
Match: KAA0058297.1 (xyloglucan endotransglucosylase/hydrolase protein 22-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 410 bits (1055), Expect = 2.91e-143
Identity = 197/201 (98.01%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 18  MFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV 77
           MFS ASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV
Sbjct: 1   MFSSASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV 60

Query: 78  PRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP 137
           PRNSAGTVTAYYLSS+GSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP
Sbjct: 61  PRNSAGTVTAYYLSSEGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP 120

Query: 138 TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG 197
           TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG
Sbjct: 121 TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG 180

Query: 198 GLVKIDWTQAPFVASYRNFSV 218
           GLVK DWTQAPF ASYRNFSV
Sbjct: 181 GLVKTDWTQAPFEASYRNFSV 201

[Close]

BLAST of Cucsat.G18492 vs. NCBI nr
Match: TYK11853.1 (xyloglucan endotransglucosylase/hydrolase protein 22-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 394 bits (1012), Expect = 8.65e-137
Identity = 192/201 (95.52%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 18  MFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV 77
           MFS ASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV
Sbjct: 1   MFSSASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV 60

Query: 78  PRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP 137
           PRNSAGT     LSS+GSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP
Sbjct: 61  PRNSAGT-----LSSEGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP 120

Query: 138 TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG 197
           TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG
Sbjct: 121 TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG 180

Query: 198 GLVKIDWTQAPFVASYRNFSV 218
           GLVK DWTQAPF ASYRNFSV
Sbjct: 181 GLVKTDWTQAPFEASYRNFSV 196

[Close]

BLAST of Cucsat.G18492 vs. ExPASy TrEMBL
Match: N0DX76 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth2 PE=3 SV=1)

HSP 1 Score: 444 bits (1141), Expect = 1.97e-156
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 2   MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 61
           MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS
Sbjct: 1   MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 60

Query: 62  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS 121
           KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS
Sbjct: 61  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS 120

Query: 122 QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 181
           QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM
Sbjct: 121 QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 180

Query: 182 RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV 218
           RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV
Sbjct: 181 RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV 217

[Close]

BLAST of Cucsat.G18492 vs. ExPASy TrEMBL
Match: A0A1S3BXH4 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo OX=3656 GN=LOC103494281 PE=3 SV=1)

HSP 1 Score: 434 bits (1117), Expect = 9.27e-153
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 2   MTTSVLLNFLISLTFLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 61
           MTTS+LLNFLISLTFLMFS ASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS
Sbjct: 2   MTTSLLLNFLISLTFLMFSSASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQS 61

Query: 62  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYS 121
           KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSS+GSMWDEIDFEFLGNLSGEPYILHTNVYS
Sbjct: 62  KSEYLFGKIDMQLKLVPRNSAGTVTAYYLSSEGSMWDEIDFEFLGNLSGEPYILHTNVYS 121

Query: 122 QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 181
           QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM
Sbjct: 122 QGKGDKEQQFYLWFDPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPM 181

Query: 182 RIYSSLWNADNWATRGGLVKIDWTQAPFVASYRNFSV 218
           RIYSSLWNADNWATRGGLVK DWTQAPF ASYRNFSV
Sbjct: 182 RIYSSLWNADNWATRGGLVKTDWTQAPFEASYRNFSV 218

[Close]

BLAST of Cucsat.G18492 vs. ExPASy TrEMBL
Match: A0A5A7UU82 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006310 PE=3 SV=1)

HSP 1 Score: 410 bits (1055), Expect = 1.41e-143
Identity = 197/201 (98.01%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 18  MFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV 77
           MFS ASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV
Sbjct: 1   MFSSASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV 60

Query: 78  PRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP 137
           PRNSAGTVTAYYLSS+GSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP
Sbjct: 61  PRNSAGTVTAYYLSSEGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP 120

Query: 138 TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG 197
           TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG
Sbjct: 121 TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG 180

Query: 198 GLVKIDWTQAPFVASYRNFSV 218
           GLVK DWTQAPF ASYRNFSV
Sbjct: 181 GLVKTDWTQAPFEASYRNFSV 201

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BLAST of Cucsat.G18492 vs. ExPASy TrEMBL
Match: A0A5D3CIV4 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00750 PE=3 SV=1)

HSP 1 Score: 394 bits (1012), Expect = 4.19e-137
Identity = 192/201 (95.52%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 18  MFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV 77
           MFS ASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV
Sbjct: 1   MFSSASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLKLV 60

Query: 78  PRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP 137
           PRNSAGT     LSS+GSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP
Sbjct: 61  PRNSAGT-----LSSEGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWFDP 120

Query: 138 TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG 197
           TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG
Sbjct: 121 TADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWATRG 180

Query: 198 GLVKIDWTQAPFVASYRNFSV 218
           GLVK DWTQAPF ASYRNFSV
Sbjct: 181 GLVKTDWTQAPFEASYRNFSV 196

[Close]

BLAST of Cucsat.G18492 vs. ExPASy TrEMBL
Match: A0A061GRL0 (Xyloglucan endotransglucosylase/hydrolase OS=Theobroma cacao OX=3641 GN=TCM_038920 PE=3 SV=1)

HSP 1 Score: 376 bits (965), Expect = 1.45e-129
Identity = 177/202 (87.62%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 16  FLMFSLASNFFQDFDITWGDGRAKILENGELLTLSLDKASGSGFQSKSEYLFGKIDMQLK 75
           F M + A NF+QDFD+TWGDGRAKIL NG+LLTL+LDKASGSGFQSK+EYLFGKIDMQLK
Sbjct: 21  FFMAASAGNFYQDFDLTWGDGRAKILNNGQLLTLALDKASGSGFQSKNEYLFGKIDMQLK 80

Query: 76  LVPRNSAGTVTAYYLSSKGSMWDEIDFEFLGNLSGEPYILHTNVYSQGKGDKEQQFYLWF 135
           LVP NSAGTVTAYYLSSKGS WDEIDFEFLGNLSG+PYILHTNVYSQGKG++EQQFYLWF
Sbjct: 81  LVPGNSAGTVTAYYLSSKGSTWDEIDFEFLGNLSGDPYILHTNVYSQGKGNREQQFYLWF 140

Query: 136 DPTADFHTYSILWNPQRIIFSVDDTPIREFNNSESIGVPFPKKQPMRIYSSLWNADNWAT 195
           DPTADFHTYSILWNPQRIIFSVD TPIREF N ES GVPFPKKQPMRIYSSLWNAD+WAT
Sbjct: 141 DPTADFHTYSILWNPQRIIFSVDGTPIREFKNLESNGVPFPKKQPMRIYSSLWNADDWAT 200

Query: 196 RGGLVKIDWTQAPFVASYRNFS 217
           RGGLVK DW+QAPF ASYRNF+
Sbjct: 201 RGGLVKTDWSQAPFTASYRNFN 222

The following BLAST results are available for this feature:

BLAST of Cucsat.G18492 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38910	1.3e-93	77.34	Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis tha...	[more]
Q38907	2.8e-93	73.24	Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis tha...	[more]
P24806	8.2e-93	74.29	Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana OX=...	[more]
Q38857	7.7e-91	73.02	Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana OX=...	[more]
P35694	2.5e-89	72.04	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Cucsat.G18492 vs. NCBI nr


Match Name	E-value	Identity	Description
CCH26404.1	4.07e-156	100.00	xyloglucan endotransglycosylase [Cucumis sativus]	[more]
XP_004146306.1	3.34e-155	99.54	xyloglucan endotransglucosylase/hydrolase protein 24 isoform X1 [Cucumis sativus...	[more]
XP_008453623.1	1.92e-152	97.70	PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 22-like isoform X1 ...	[more]
KAA0058297.1	2.91e-143	98.01	xyloglucan endotransglucosylase/hydrolase protein 22-like isoform X1 [Cucumis me...	[more]
TYK11853.1	8.65e-137	95.52	xyloglucan endotransglucosylase/hydrolase protein 22-like isoform X1 [Cucumis me...	[more]

BLAST of Cucsat.G18492 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
N0DX76	1.97e-156	100.00	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth2 PE=...	[more]
A0A1S3BXH4	9.27e-153	97.70	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo OX=3656 GN=LOC10349428...	[more]
A0A5A7UU82	1.41e-143	98.01	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5D3CIV4	4.19e-137	95.52	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A061GRL0	1.45e-129	87.62	Xyloglucan endotransglucosylase/hydrolase OS=Theobroma cacao OX=3641 GN=TCM_0389...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.200		coord: 14..218 e-value: 2.0E-85 score: 288.5
None	No IPR available	PANTHER	PTHR31062:SF178	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE	coord: 10..217
IPR000757	Glycoside hydrolase family 16	PFAM	PF00722	Glyco_hydro_16	coord: 27..205 e-value: 1.6E-61 score: 206.9
IPR000757	Glycoside hydrolase family 16	PROSITE	PS51762	GH16_2	coord: 19..213 score: 28.56736
IPR044791	Beta-glucanase/XTH	PANTHER	PTHR31062	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED	coord: 10..217
IPR008263	Glycoside hydrolase, family 16, active site	PROSITE	PS01034	GH16_1	coord: 99..109
IPR016455	Xyloglucan endotransglucosylase/hydrolase	CDD	cd02176	GH16_XET	coord: 22..218 e-value: 6.93939E-133 score: 372.302
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 27..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G18492.T1	Cucsat.G18492.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042546	cell wall biogenesis
biological_process	GO:0071555	cell wall organization
biological_process	GO:0010411	xyloglucan metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0048046	apoplast
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity