Cucsat.G17960 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G17960
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	RING-type domain-containing protein
Location	ctg3345: 2031066 .. 2033159 (+)
RNA-Seq Expression	Cucsat.G17960
Synteny	Cucsat.G17960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGAAAGCAAAAGAAAAAGAGATTATTGTTATTAAAGTTTGTAAGTAAATTTTTTTTTTAGCAACTTTTAATCTACTCTCAACACAAAATATTTTTAAATTTCTCTCTCCCTATAAAGTTTCATAATTATGTTGTGTGAATGATGTTGGTCCAACTCTGACAGTCATATGTAATTAATATGCCCCCCTATGCCCTTTTAATTTATTTATTTGCTCTTTCGTCCTTTTATCATTCAAAGTGGTTGGTGGCTACCTCTACCTTCACACCCTATAAACATCCATTTATATTTCCAAAATTATCAAAAGGAAATTTCATTAAATATTATGTTCCATATATCTCTAAATTTATCTACATAGGTGATTTATTTATTTATTTATTTTAAGTTGAGTAAGAAGAGAGTGATAAGGTATGGAGAAAAAAGATGAGGAGGAAAGTAGTGAATGATGTAGATGAATTAAGAATGTGGTTAATGAAAGAGTTGTGATAAAGATGATTAATTGTTGGAATGAGGAAATAAAGGGATCGGAGAGGGTAAGATGTGAAGGGATGGGGTTGTGGGTTTTATTAAAAGAAAAGAAAAAAAAGAGAAGAAGTGGTTGAACTAAAATAGAGTTTGAAAGAAGGCATTAAAGGGGAAAAAAACCATATTTAAAAAAAAAAGAAGAAAGAAAGTGAGAAGTCGGTTAGACCGTACCCAAAAAAAAGAAAAAAAAAAGAAAAAGAAAAAAGCCCTTTCAGTCTCCTTACGTGCGTCATCTGCTTTAATACTCCACGTCGCATATTACCCACAATCTCAACTCTCTCTTCTTCCTTCATTATTATATTAATCACATTATATGTTTTTATTTAAACAACCAATCCAATATTCCGTTGGAAAAGGTCATGAATCTCGTAAATCTCCTCCTAACTTTCCCTAAATTACGGGATTGACCCGCATCCCCCTCTTCTCTTTTCCTCTTACTTCTTTTTACCTATAAATACAAACCCTCACATCATTTCTCTCTTCCGAATACACTTTTTTTTGTTCTTTAAATAAATTTCAATTTCCCAGAGCAACGCATTTCAATTTCTCTCTTTTTTTTTCCTTTTTTTGTATGTGATATGGGTATGGGATACGGATCGCCATTAACGGCCTTCAATGCTAACTCTACAGCCGTGGAGACCGCAGCTCTCTTTCCTCCATACAATTCTACTTTACCAATGGATTCCTTTCCTAAGGCCACTGCGGTGCTTCCCACTTCCACAGGTGTTGTTATGAAATCCGATAGCGGTATAACCTACAATCTTCCCATTCCGGCCAGAAAGCGACCGAGAGATCATCATCATCATCATTCTTCTACTTCTACACTAAACCGATTCGTTTCCTATCCTTCATCGCAACTTCATAATAATTCACAGAAGAATTGCGGATGTAATTTGTATTTTCTGGGTGAAGATATCTCAATTCAGATTCAACAACAACAGATGGATCTAGATCTATTGATTTCACAACATGTACGGTATAGCTTAACTTTTGAAAAATATATATTTATTTATAGATGTGTGTGAAATTAATTTCAATTTTACTTGATTTTGGGGGTTGTAATTAGCAGATGGAGAAGGTGAGAATGGAAGTGGAGGAGAAACGGAAGAGAGAGGCGAGGAGAATAATGGAGGTAATAGAGGTGGGGATGATGAGGGTATTGAGGAGTAAAGAGGAAGAGATAGAGAAGATGGGGAAATTAAATTGGGAATTGGAGGAGAGAGTGAATTGTTTGAGTATGGAGAATCAAATATGGAGAGATGTGGCAGAGACGAATGAAGCGACGGCAAATGCGTTAAGGAGGAATTTGGAGGAAGTGCTGCTTTTACAGGAGACGAAGACAACGGTGGTGGTGGTGGAGGAGGAGGTGGCAGAGTCGTGTTGTGAGGGGGGTGGTGGTGGGGCAGAGGAAGAAGATGATGAGAGGAGGATGAGGAAGAAGAAGAGGAAGCAGGAAGAGGAAAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA

Coding sequence (CDS)

ATGGATTCCTTTCCTAAGGCCACTGCGGTGCTTCCCACTTCCACAGGTGTTGTTATGAAATCCGATAGCGGTATAACCTACAATCTTCCCATTCCGGCCAGAAAGCGACCGAGAGATCATCATCATCATCATTCTTCTACTTCTACACTAAACCGATTCGTTTCCTATCCTTCATCGCAACTTCATAATAATTCACAGAAGAATTGCGGATGTAATTTGTATTTTCTGGGTGAAGATATCTCAATTCAGATTCAACAACAACAGATGGATCTAGATCTATTGATTTCACAACATATGGAGAAGGTGAGAATGGAAGTGGAGGAGAAACGGAAGAGAGAGGCGAGGAGAATAATGGAGGTAATAGAGGTGGGGATGATGAGGGTATTGAGGAGTAAAGAGGAAGAGATAGAGAAGATGGGGAAATTAAATTGGGAATTGGAGGAGAGAGTGAATTGTTTGAGTATGGAGAATCAAATATGGAGAGATGTGGCAGAGACGAATGAAGCGACGGCAAATGCGTTAAGGAGGAATTTGGAGGAAGTGCTGCTTTTACAGGAGACGAAGACAACGGTGGTGGTGGTGGAGGAGGAGGTGGCAGAGTCGTGTTGTGAGGGGGGTGGTGGTGGGGCAGAGGAAGAAGATGATGAGAGGAGGATGAGGAAGAAGAAGAGGAAGCAGGAAGAGGAAAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA

Protein sequence

MDSFPKATAVLPTSTGVVMKSDSGITYNLPIPARKRPRDHHHHHSSTSTLNRFVSYPSSQLHNNSQKNCGCNLYFLGEDISIQIQQQQMDLDLLISQHMEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQIWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERRMRKKKRKQEEENEEEEEEEEEE

Homology

[Close]

BLAST of Cucsat.G17960 vs. ExPASy Swiss-Prot
Match: F4IDI6 (Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=3702 GN=BRG2 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-41
Identity = 108/195 (55.38%), Postives = 132/195 (67.69%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           ME+V+ E+EEKRKR+AR IME IE G+++ LR KEEE E++GK+N  LEERV  LS+ENQ
Sbjct: 167 MERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLSIENQ 226

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVV-----VVEEEVAESCCEGGGGGAEEE 120
           IWRD+A+TNEATAN LR NLE VL   +  +        + EE+ AESCC    GG  EE
Sbjct: 227 IWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLEKNMNEEDDAESCCGSSCGGGGEE 286

Query: 121 DDERRMRKKKRKQEEENEEEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLH 180
              RR+         E E +++ E    R C+ CG+EESCVLLLPCRHLCLC VC SS+H
Sbjct: 287 TVRRRVGL-------EREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVH 346

Query: 181 NCPICNSTNNASVRV 191
            CPIC S  NASV V
Sbjct: 347 TCPICTSPKNASVHV 354

[Close]

BLAST of Cucsat.G17960 vs. ExPASy Swiss-Prot
Match: Q9LDD1 (Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-31
Identity = 91/193 (47.15%), Postives = 129/193 (66.84%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           +E++RME+EEKRK + RRI+E +E G+M+ LR+K++EI  +GKLN  LEE+V  L +ENQ
Sbjct: 149 VERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEINHIGKLNLFLEEKVKSLCVENQ 208

Query: 61  IWRDVAETNEATANALRRNLEEVL-LLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDER 120
           IWRDVA++NEAT NALR NL++VL  ++  +        + A+SCC    G  +E D E 
Sbjct: 209 IWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEPPTVADDAQSCC----GSNDEGDSE- 268

Query: 121 RMRKKKRKQEEENEEEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPI 180
              +++ K   E ++ ++        C+ CGK E+ VLLLPCRH+CLC+VC SSL+ CPI
Sbjct: 269 ---EERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCLCSVCGSSLNTCPI 328

Query: 181 CNSTNNASVRVIL 193
           C S   AS+ V L
Sbjct: 329 CKSPKTASLHVNL 333

[Close]

BLAST of Cucsat.G17960 vs. ExPASy Swiss-Prot
Match: O81851 (E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 81/195 (41.54%), Postives = 111/195 (56.92%), Query Frame = 0


Query: 2   EKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQI 61
           EK+R+E+E +++ + R +   ++  + + L+ K++EI ++  LNW L+ERV  L +ENQI
Sbjct: 132 EKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIVRIRNLNWVLQERVKSLYVENQI 191

Query: 62  WRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAE----SCCEGGGGGAEEEDD 121
           WRD+A+TNEA AN LR NL++VL   ET  T   V E+ AE    SCC  GGG       
Sbjct: 192 WRDIAQTNEANANTLRTNLDQVLAQLETFPTASAVVEDDAESSCGSCCGDGGG------- 251

Query: 122 ERRMRKKKRKQEEENEEEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASS--LH 181
                              E        CK+CG+ E+ VL+LPCRHLCLCTVC  S  L 
Sbjct: 252 -------------------EAVTAVGGGCKRCGEREASVLVLPCRHLCLCTVCGGSALLR 300

Query: 182 NCPICNSTNNASVRV 191
            CP+C+   NASV V
Sbjct: 312 TCPVCDMVMNASVHV 300

[Close]

BLAST of Cucsat.G17960 vs. ExPASy Swiss-Prot
Match: Q9FHE4 (BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG1 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-25
Identity = 79/194 (40.72%), Postives = 111/194 (57.22%), Query Frame = 0


Query: 2   EKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQI 61
           E +R+E+E +++ + R +   ++  +++ L++K+EEI +MGKLNW L+ERV  L +ENQI
Sbjct: 122 ETLRIELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGKLNWVLQERVKNLYVENQI 181

Query: 62  WRDVAETNEATANALRRNLEEVLLLQETKTTV---VVVEEEVAESCCEGGGGGAEEEDDE 121
           WRD+A+TNEATAN LR NLE+VL   +        +V E + AES C    GG       
Sbjct: 182 WRDLAQTNEATANNLRSNLEQVLAQVDDLDAFRRPLVEEADDAESSCGSCDGG------- 241

Query: 122 RRMRKKKRKQEEENEEEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASS--LHN 181
                             +        CK+CG+  + VL+LPCRHLCLCTVC SS  L  
Sbjct: 242 ------------------DVTAVVNGGCKRCGELTASVLVLPCRHLCLCTVCGSSALLRT 290

Query: 182 CPICNSTNNASVRV 191
           CP+C+    ASV V
Sbjct: 302 CPVCDMVMTASVHV 290

[Close]

BLAST of Cucsat.G17960 vs. ExPASy Swiss-Prot
Match: Q13489 (Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens OX=9606 GN=BIRC3 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 2.2e-04
Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 0


Query: 134 EEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPICNSTNNASVRVIL 193
           EE+    +EER CK C  +E  ++ +PC HL +C  CA SL  CPIC ST   +VR  L
Sbjct: 545 EEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTFL 603

[Close]

BLAST of Cucsat.G17960 vs. NCBI nr
Match: XP_004145732.2 (probable BOI-related E3 ubiquitin-protein ligase 2 isoform X2 [Cucumis sativus] >KGN46823.1 hypothetical protein Csa_020941 [Cucumis sativus])

HSP 1 Score: 343 bits (879), Expect = 3.58e-116
Identity = 191/193 (98.96%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ
Sbjct: 132 MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 191

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR 120
           IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR
Sbjct: 192 IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR 251

Query: 121 MRKKKRKQEEENEEEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPIC 180
           MRKKKRKQEEENEEE EE EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPIC
Sbjct: 252 MRKKKRKQEEENEEE-EEAEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPIC 311

Query: 181 NSTNNASVRVILP 193
           NSTNNASVRVILP
Sbjct: 312 NSTNNASVRVILP 323

[Close]

BLAST of Cucsat.G17960 vs. NCBI nr
Match: XP_011656988.1 (probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 343 bits (879), Expect = 3.70e-116
Identity = 191/193 (98.96%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ
Sbjct: 133 MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 192

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR 120
           IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR
Sbjct: 193 IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR 252

Query: 121 MRKKKRKQEEENEEEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPIC 180
           MRKKKRKQEEENEEE EE EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPIC
Sbjct: 253 MRKKKRKQEEENEEE-EEAEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPIC 312

Query: 181 NSTNNASVRVILP 193
           NSTNNASVRVILP
Sbjct: 313 NSTNNASVRVILP 324

[Close]

BLAST of Cucsat.G17960 vs. NCBI nr
Match: XP_008456341.1 (PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 isoform X2 [Cucumis melo])

HSP 1 Score: 311 bits (796), Expect = 1.52e-103
Identity = 178/199 (89.45%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           MEKVRMEVEEKRKREARRIMEVIE+GMMR+LRSKEEEIEKMGKLNWELEERVNCLSMENQ
Sbjct: 136 MEKVRMEVEEKRKREARRIMEVIELGMMRILRSKEEEIEKMGKLNWELEERVNCLSMENQ 195

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR 120
           IWRDVAETNEATANALRRNLEEVLLLQE KTTVVVVEEEVAESCCEGGGGG +E DDERR
Sbjct: 196 IWRDVAETNEATANALRRNLEEVLLLQE-KTTVVVVEEEVAESCCEGGGGGTDE-DDERR 255

Query: 121 MRKKKRKQEEENEEEEEEE------EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL 180
           MRKKKRK        EEE+      EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL
Sbjct: 256 MRKKKRK--------EEEDGGGGGGEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL 315

Query: 181 HNCPICNSTNNASVRVILP 193
           HNCPICNSTNNASVRVILP
Sbjct: 316 HNCPICNSTNNASVRVILP 324

[Close]

BLAST of Cucsat.G17960 vs. NCBI nr
Match: XP_008456340.1 (PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 [Cucumis melo])

HSP 1 Score: 311 bits (796), Expect = 1.57e-103
Identity = 178/199 (89.45%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           MEKVRMEVEEKRKREARRIMEVIE+GMMR+LRSKEEEIEKMGKLNWELEERVNCLSMENQ
Sbjct: 137 MEKVRMEVEEKRKREARRIMEVIELGMMRILRSKEEEIEKMGKLNWELEERVNCLSMENQ 196

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR 120
           IWRDVAETNEATANALRRNLEEVLLLQE KTTVVVVEEEVAESCCEGGGGG +E DDERR
Sbjct: 197 IWRDVAETNEATANALRRNLEEVLLLQE-KTTVVVVEEEVAESCCEGGGGGTDE-DDERR 256

Query: 121 MRKKKRKQEEENEEEEEEE------EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL 180
           MRKKKRK        EEE+      EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL
Sbjct: 257 MRKKKRK--------EEEDGGGGGGEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL 316

Query: 181 HNCPICNSTNNASVRVILP 193
           HNCPICNSTNNASVRVILP
Sbjct: 317 HNCPICNSTNNASVRVILP 325

[Close]

BLAST of Cucsat.G17960 vs. NCBI nr
Match: XP_038900738.1 (probable BOI-related E3 ubiquitin-protein ligase 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 249 bits (636), Expect = 9.05e-80
Identity = 144/200 (72.00%), Postives = 158/200 (79.00%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           ME+V+ME+EEK+KREARRI+EVIE+GMMR+LRSKEEEIEK+GKLNWELEERVNCLSMENQ
Sbjct: 112 MERVKMELEEKQKREARRILEVIEIGMMRILRSKEEEIEKIGKLNWELEERVNCLSMENQ 171

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCE-------GGGGGAE 120
           +WRDVAETNEATANALR NLE+VLL    +   V  EEE AESCC        GGGGG  
Sbjct: 172 LWRDVAETNEATANALRSNLEQVLL----QVNTVAEEEEDAESCCGSNDDGGCGGGGGV- 231

Query: 121 EEDDERRMRKKKRKQEEENEEEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASS 180
                    +KKRK         E +EEEERRCKKC KEESCVLLLPCRHLCLCTVCASS
Sbjct: 232 ---------RKKRK---------EGDEEEERRCKKCWKEESCVLLLPCRHLCLCTVCASS 288

Query: 181 LHNCPICNSTNNASVRVILP 193
           LH CPICNSTNNASVRVI+P
Sbjct: 292 LHTCPICNSTNNASVRVIMP 288

[Close]

BLAST of Cucsat.G17960 vs. ExPASy TrEMBL
Match: A0A0A0KBB9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139230 PE=4 SV=1)

HSP 1 Score: 343 bits (879), Expect = 1.73e-116
Identity = 191/193 (98.96%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ
Sbjct: 132 MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 191

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR 120
           IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR
Sbjct: 192 IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR 251

Query: 121 MRKKKRKQEEENEEEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPIC 180
           MRKKKRKQEEENEEE EE EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPIC
Sbjct: 252 MRKKKRKQEEENEEE-EEAEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSLHNCPIC 311

Query: 181 NSTNNASVRVILP 193
           NSTNNASVRVILP
Sbjct: 312 NSTNNASVRVILP 323

[Close]

BLAST of Cucsat.G17960 vs. ExPASy TrEMBL
Match: A0A1S3C2Z7 (probable BOI-related E3 ubiquitin-protein ligase 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496308 PE=4 SV=1)

HSP 1 Score: 311 bits (796), Expect = 7.35e-104
Identity = 178/199 (89.45%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           MEKVRMEVEEKRKREARRIMEVIE+GMMR+LRSKEEEIEKMGKLNWELEERVNCLSMENQ
Sbjct: 136 MEKVRMEVEEKRKREARRIMEVIELGMMRILRSKEEEIEKMGKLNWELEERVNCLSMENQ 195

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR 120
           IWRDVAETNEATANALRRNLEEVLLLQE KTTVVVVEEEVAESCCEGGGGG +E DDERR
Sbjct: 196 IWRDVAETNEATANALRRNLEEVLLLQE-KTTVVVVEEEVAESCCEGGGGGTDE-DDERR 255

Query: 121 MRKKKRKQEEENEEEEEEE------EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL 180
           MRKKKRK        EEE+      EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL
Sbjct: 256 MRKKKRK--------EEEDGGGGGGEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL 315

Query: 181 HNCPICNSTNNASVRVILP 193
           HNCPICNSTNNASVRVILP
Sbjct: 316 HNCPICNSTNNASVRVILP 324

[Close]

BLAST of Cucsat.G17960 vs. ExPASy TrEMBL
Match: A0A1S3C331 (probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496308 PE=4 SV=1)

HSP 1 Score: 311 bits (796), Expect = 7.59e-104
Identity = 178/199 (89.45%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           MEKVRMEVEEKRKREARRIMEVIE+GMMR+LRSKEEEIEKMGKLNWELEERVNCLSMENQ
Sbjct: 137 MEKVRMEVEEKRKREARRIMEVIELGMMRILRSKEEEIEKMGKLNWELEERVNCLSMENQ 196

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDERR 120
           IWRDVAETNEATANALRRNLEEVLLLQE KTTVVVVEEEVAESCCEGGGGG +E DDERR
Sbjct: 197 IWRDVAETNEATANALRRNLEEVLLLQE-KTTVVVVEEEVAESCCEGGGGGTDE-DDERR 256

Query: 121 MRKKKRKQEEENEEEEEEE------EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL 180
           MRKKKRK        EEE+      EEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL
Sbjct: 257 MRKKKRK--------EEEDGGGGGGEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL 316

Query: 181 HNCPICNSTNNASVRVILP 193
           HNCPICNSTNNASVRVILP
Sbjct: 317 HNCPICNSTNNASVRVILP 325

[Close]

BLAST of Cucsat.G17960 vs. ExPASy TrEMBL
Match: A0A6J1JCV5 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483871 PE=4 SV=1)

HSP 1 Score: 247 bits (630), Expect = 6.67e-79
Identity = 146/199 (73.37%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           MEKVRME+EEKRKREARRIME IEVGMM +LRSKEEEIEKMGKLNWELEERVN L MENQ
Sbjct: 122 MEKVRMEMEEKRKREARRIMEAIEVGMMGILRSKEEEIEKMGKLNWELEERVNSLCMENQ 181

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDE-- 120
           IWRDVAETNEATANALR +LE VLL  + K    V EEE AESCC   GG  EEE++E  
Sbjct: 182 IWRDVAETNEATANALRSDLELVLL--DVKKEEEVEEEEKAESCCGSNGGDMEEEEEEEV 241

Query: 121 ----RRMRKKKRKQEEENEEEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL 180
               R+ RK +RK          E+EEE+RRCK C KEESCVLLLPCRHLCLCTVC SSL
Sbjct: 242 EEERRKGRKTRRK----------EKEEEDRRCKNCWKEESCVLLLPCRHLCLCTVCGSSL 301

Query: 181 HNCPICNSTNNASVRVILP 193
           H+CPICNSTNNASVRVI+P
Sbjct: 302 HHCPICNSTNNASVRVIMP 308

[Close]

BLAST of Cucsat.G17960 vs. ExPASy TrEMBL
Match: A0A6J1FUW1 (probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448331 PE=4 SV=1)

HSP 1 Score: 247 bits (630), Expect = 6.67e-79
Identity = 146/199 (73.37%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 1   MEKVRMEVEEKRKREARRIMEVIEVGMMRVLRSKEEEIEKMGKLNWELEERVNCLSMENQ 60
           MEKVRME+EEKRKREARRIME IEVGMM +LRSKEEEIEKMGKLNWELEERVN L MENQ
Sbjct: 122 MEKVRMEMEEKRKREARRIMEAIEVGMMGILRSKEEEIEKMGKLNWELEERVNSLCMENQ 181

Query: 61  IWRDVAETNEATANALRRNLEEVLLLQETKTTVVVVEEEVAESCCEGGGGGAEEEDDE-- 120
           IWRDVAETNEATANALR +LE VLL  + K    V EEE AESCC   GG  EEE++E  
Sbjct: 182 IWRDVAETNEATANALRSDLELVLL--DVKKEEEVEEEEKAESCCGSNGGDMEEEEEEEV 241

Query: 121 ----RRMRKKKRKQEEENEEEEEEEEEEERRCKKCGKEESCVLLLPCRHLCLCTVCASSL 180
               R+ RK +RK          E+EEE+RRCK C KEESCVLLLPCRHLCLCTVC SSL
Sbjct: 242 EEERRKGRKTRRK----------EKEEEDRRCKNCWKEESCVLLLPCRHLCLCTVCGSSL 301

Query: 181 HNCPICNSTNNASVRVILP 193
           H+CPICNSTNNASVRVI+P
Sbjct: 302 HHCPICNSTNNASVRVIMP 308

The following BLAST results are available for this feature:

BLAST of Cucsat.G17960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IDI6	1.7e-41	55.38	Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=37...	[more]
Q9LDD1	3.6e-31	47.15	Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=37...	[more]
O81851	1.1e-27	41.54	E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1	[more]
Q9FHE4	2.9e-25	40.72	BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG...	[more]
Q13489	2.2e-04	45.76	Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens OX=9606 GN=BIRC3 PE=...	[more]

BLAST of Cucsat.G17960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145732.2	3.58e-116	98.96	probable BOI-related E3 ubiquitin-protein ligase 2 isoform X2 [Cucumis sativus] ...	[more]
XP_011656988.1	3.70e-116	98.96	probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 [Cucumis sativus]	[more]
XP_008456341.1	1.52e-103	89.45	PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 isoform X2 [Cucumi...	[more]
XP_008456340.1	1.57e-103	89.45	PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 [Cucumi...	[more]
XP_038900738.1	9.05e-80	72.00	probable BOI-related E3 ubiquitin-protein ligase 2 isoform X2 [Benincasa hispida...	[more]

BLAST of Cucsat.G17960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBB9	1.73e-116	98.96	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139230 P...	[more]
A0A1S3C2Z7	7.35e-104	89.45	probable BOI-related E3 ubiquitin-protein ligase 2 isoform X2 OS=Cucumis melo OX...	[more]
A0A1S3C331	7.59e-104	89.45	probable BOI-related E3 ubiquitin-protein ligase 2 isoform X1 OS=Cucumis melo OX...	[more]
A0A6J1JCV5	6.67e-79	73.37	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1FUW1	6.67e-79	73.37	probable BOI-related E3 ubiquitin-protein ligase 3 isoform X2 OS=Cucurbita mosch...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 212..240
None	No IPR available	COILS	Coil	Coil	coord: 129..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..229
None	No IPR available	PANTHER	PTHR42647:SF12	BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED	coord: 10..224
IPR017066	E3 ubiquitin-protein ligase BOI-like	PANTHER	PTHR42647	SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN	coord: 10..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G17960.T4	Cucsat.G17960.T4	mRNA
Cucsat.G17960.T1	Cucsat.G17960.T1	mRNA
Cucsat.G17960.T3	Cucsat.G17960.T3	mRNA
Cucsat.G17960.T2	Cucsat.G17960.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0043067	regulation of programmed cell death
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity