Cucsat.G17957 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G17957
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Pyridoxal 5'-phosphate synthase subunit PdxT
Location	ctg3345: 1955141 .. 1958059 (+)
RNA-Seq Expression	Cucsat.G17957
Synteny	Cucsat.G17957

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACTTTTTATAGTGTAATAACTTTACAATATAGTCAATGAAATATAGTTTTGATTGAATTTGCAAGTTGAGCATCTTTTTGAAAGATACAATACAATTTGCCAAAAGTGGGGATTGCGAGCCGCCAGCCTCGGCTGCAGCGAGGCTTTGTTCCAATTACCGCCACTCGAAATGAGAGGTTCCAAGTGTTCAATCGACACACCCTTCTGATTCTCTCTCAATTTCTCCCCCTTTTTAATTGCTTCGCCGGAGCCGGAGTTTCCGGCTTCTAGGGCTACTCAACGCTCCAATTCGCTACCATGACGATCGTCGGCGTTCTTGCTCTGCAGGGTTCTTTTAACGAACACATCGCAGGCATATTCTTCTTCTCCTTCTCCTTCTTCTTCGCTGTCGCTATCTCCTTTTTGTAGTAACTGATTATCTTTGTGTTAAGCAGCTTTGAGAAGGTTGGGAGTGAAGGGTGTAGAGATACGGAAGCCCGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGGGAAAGTACCACCATGGCCAAACTTGCGGAGCTCCATAATTTGGTTTGTTCTTCTTTTCTTCCTCTAGATGTTGCATTCGTAATCGTTTTTGAAGGTTTTCTTTAGTTTGTTCCAAGCATCTATAGCTACATAAACGCTTCCACATGAATAAGCAAAAAAAGGTTCAAACATCTAGTATTCAATTTCGTGTAATAAGCAGAAATGCAATCTTTAAAACTTGGTGCGAAACTGGCTCGTTTCTACGAACCCGCTAAAGCTGTTTCTCGAATTAGATATATCAGACGTCTCAAATTTAGGAAATAATCGCTCATGTTCGTTTGGTTGAGCTCATTCTCATGTAGCTTAGAATTAGAATCGAGTGAAGTATTTATCTTTTGGTATTTTTGTATGTTTGCAGTTTCCTGCTTTGCGAGAGTTTGTTAGAATGGGGAAGCCTGTGTGGGGCACCTGTGCAGGACTTATCTTTTTGGCAAACAAGGCTACTGGTAGATTTCCTTCCTTTTTTCCTCAACATCTCAACTTTGGATGTTCTTTCCCAAACCCCACCTCCAACACATCAATAAATTATTGAAGTGTGTTCTAAACTTTATATGGGGACATGTATTTTCAGGACAGAAAACTGGTGGACAGGGACTTGTTGGAGGTCTGGATTGTACTGTTCACAGGAACTTCTTTGGCAGTCAGGTAACTCTCCTTTTGAGTTGTGATTTTGATTTTCAAGATGCATGAAAATAACTGGAGAAGAAACTTGTTTAGGGATCAAATTTGCATAAAGCTATCTCTGCTCGTGTGACATTGTAGCAGACGTGACTTTACCCTTTCAGTCATCCTACGAATTGGCGTCTAAAGTTTTTTTGAACCATTGCATGTTGGAAATATATAGCCCTCAAGAATTTGGGGAGCTAAGATCCTTGCTAATGGTCATTACGGTCCTTTGGGAATTTTGAACCACGTTACTATGAAATCTATCTGTCTATTGGCTCAACTAATGACTTTTCCCCAATGAAAAGTTTCATACTTCATTTAAAGTCCTCCGTGTAACAAGCATTGTGAGATCTGCTTAATTGAGGTTTTAGTTGAAGCATGGAGTTTTAAATGCAGGTTTCTCGATGGTTTTTTTTTTTTTTTCACAAGCTGATCCAAACACAAATATTCTAAGAATTTCTGCTTTGATGTTGATTCCGGATGTTCTGTTTTCCCCTCAATTACATATTTAGCAGTGTTACTAATAAGTATAGCAAGCCCATTTAACTCAACGTTGAAGTTCACTTTATATTAATTTTCCATTTCTATAGTTCAAATTTTCCTAATTTAAGAAGATCATGATTATATAGCTTCAAAGCTTTGAGTCAGAGCTCTCGATACCAGAGCTAGTGTCTTCCGAAGGTGGTCCAGAAACATTTCGTGGAGTCTTCATCCGAGCTCCTGCAATTCTTGATGCGGGACCAGAAGTCCAAGTGCTGGCTCGCTGCCCTGTCTCTTCAAACTCTAACTTGCATTCAAGTTCCTCTGGTGAAGGCAAAAAGGTTTGTTGGTATTTTCTTCTGCTTTCACAGATCCATATCATCTGTATACCGATAGTGCCTCTATTTTGAACACCTAAATTATTATAATCTGTATGTATGAGCCGGAACTTTCAAACTGTATGTATGTTGGTTGTGAAACGGTTCAGTAGAATTATAGTTTTCACTGGCATACAGGAGTTTGCTCGTCTTGCGTATGTTTTCCTCCCACCCCTTCACATTGTGGTTTGAATATCTCAGGAAAAAGATTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCTGAATTAACATCAGATAATAGATGGTATGATGTAGTTTTAACTTGAAATTCTATCATACTGTGATGATAATCTCAAGTGAATTGCAACGATGGTTATGCAGGCACAGTTACTTCCTGAAGATGGCTGGTGATGTCGAAGAATCCTCAAGTAGCATAGAAAGCATAGGAGTTAACAATTCAAGATTCGAAAGATCAAAGAGCGACCTTCCGATTTTTATTTAGTTTAAACCAATTGAACGCCTCCTCAACCTAAATCTACAGTTTCAAGTTTCATTCTAGATTTAATCTATCTATTCTGTAGTTTGCACCATGTTTTATCTTCCTTACGTTAAGTTACAACATTCTTCTACTGTGTTAAGTTTATTTTGCTATAACTTTGTGTAGGAGATGCTGTACATGGAGTCTTCATTTGAAAAGATTCATCTCCTTTCTCATATACCACTAAAATATAATTAGTCTTAAACAGGGTAAAACTTAGAATACGAATGAATGCATGGAGGTGATTAATCTACCGAATTGTATTTAAGTTTTAAATTTGGAAAAATTTGAATAGTTAACTAAAC

Coding sequence (CDS)

ATGACGATCGTCGGCGTTCTTGCTCTGCAGGGTTCTTTTAACGAACACATCGCAGCTTTGAGAAGGTTGGGAGTGAAGGGTGTAGAGATACGGAAGCCCGAGCAGCTTCTTAATGTAGCTTCTCTGATTATTCCTGGTGGGGAAAGTACCACCATGGCCAAACTTGCGGAGCTCCATAATTTGTTTCCTGCTTTGCGAGAGTTTGTTAGAATGGGGAAGCCTGTGTGGGGCACCTGTGCAGGACTTATCTTTTTGGCAAACAAGGCTACTGGACAGAAAACTGGTGGACAGGGACTTGTTGGAGGTCTGGATTGTACTGTTCACAGGAACTTCTTTGGCAGTCAGCTTCAAAGCTTTGAGTCAGAGCTCTCGATACCAGAGCTAGTGTCTTCCGAAGGTGGTCCAGAAACATTTCGTGGAGTCTTCATCCGAGCTCCTGCAATTCTTGATGCGGGACCAGAAGTCCAAGTGCTGGCTCGCTGCCCTGTCTCTTCAAACTCTAACTTGCATTCAAGTTCCTCTGGTGAAGGCAAAAAGGAAAAAGATTCAGAAAGTAAAGTGATTGTAGCAGTGAGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCTGAATTAACATCAGATAATAGATGGCACAGTTACTTCCTGAAGATGGCTGGTGATGTCGAAGAATCCTCAAGTAGCATAGAAAGCATAGGAGTTAACAATTCAAGATTCGAAAGATCAAAGAGCGACCTTCCGATTTTTATTTAG

Protein sequence

MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFESELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKEKDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFERSKSDLPIFI

Homology

[Close]

BLAST of Cucsat.G17957 vs. ExPASy Swiss-Prot
Match: Q8LAD0 (Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX=3702 GN=PDX2 PE=1 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 4.4e-98
Identity = 182/252 (72.22%), Postives = 215/252 (85.32%), Query Frame = 0


Query: 4   VGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFP 63
           VGVLALQGSFNEHIAALRRLGV+GVEIRK +QLL V+SLIIPGGESTTMAKLAE HNLFP
Sbjct: 3   VGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSLIIPGGESTTMAKLAEYHNLFP 62

Query: 64  ALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFESEL 123
           ALREFV+MGKPVWGTCAGLIFLA++A GQK GGQ LVGGLDCTVHRNFFGSQ+QSFE+++
Sbjct: 63  ALREFVKMGKPVWGTCAGLIFLADRAVGQKEGGQELVGGLDCTVHRNFFGSQIQSFEADI 122

Query: 124 SIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKEKD- 183
            +P+L S EGGPET+RGVFIRAPA+LD GP+V+VLA  PV SN  L+SSS+ + ++E   
Sbjct: 123 LVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKVLYSSSTVQIQEEDAL 182

Query: 184 SESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEE-----SSSSIESIGVNNS 243
            E+KVIVAV+QGNLLATAFHPELT+D RWHSYF+KM  ++E+     SS +I S+G  ++
Sbjct: 183 PETKVIVAVKQGNLLATAFHPELTADTRWHSYFIKMTKEIEQGASSSSSKTIVSVGETSA 242

Query: 244 RFERSKSDLPIF 250
             E +K DLPIF
Sbjct: 243 GPEPAKPDLPIF 254

[Close]

BLAST of Cucsat.G17957 vs. ExPASy Swiss-Prot
Match: Q3Z8V9 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) OX=243164 GN=pdxT PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-43
Identity = 102/218 (46.79%), Postives = 133/218 (61.01%), Query Frame = 0


Query: 4   VGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFP 63
           +GVLALQG+F EHI  LR LG + VE+RK E+L  ++ LIIPGGESTT+ KL     L  
Sbjct: 3   IGVLALQGAFREHINMLRTLGAEAVEVRKAEELAELSGLIIPGGESTTITKLLYTFGLAK 62

Query: 64  ALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFESEL 123
            +++  R G PVWGTCAG+I LA + +G  +G + L   +D TV RN FG Q+ SFE+ L
Sbjct: 63  PVKDLARNGMPVWGTCAGMICLAKELSGDISGVKTL-ELMDITVRRNAFGRQVDSFEAML 122

Query: 124 SIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKEKDS 183
            +  L   EGG   F  VFIRAP +   G  V+VLA+ P                     
Sbjct: 123 KVKAL---EGG--DFPAVFIRAPLVEKTGQWVEVLAKLP--------------------- 182

Query: 184 ESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGD 222
               +VAVR+ NLLAT+FHPEL++DNR+H YF++MA D
Sbjct: 183 -DGTMVAVRENNLLATSFHPELSADNRFHRYFVQMAKD 192

[Close]

BLAST of Cucsat.G17957 vs. ExPASy Swiss-Prot
Match: A5D6D2 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=pdxT PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.8e-43
Identity = 104/214 (48.60%), Postives = 131/214 (61.21%), Query Frame = 0


Query: 4   VGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFP 63
           VGVLALQG+F EH   L   G + V++RKPEQL ++++L+IPGGESTT+ KL    NLF 
Sbjct: 3   VGVLALQGAFREHQKVLAACGAESVQVRKPEQLEDISALVIPGGESTTIGKLLLEFNLFE 62

Query: 64  ALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFESEL 123
            L +  + G PV+GTCAG+I LA +  G    GQ  +G +D +V RN FG Q++SFE++L
Sbjct: 63  PLVKLGQGGLPVFGTCAGMILLAREIAG---SGQPRLGLMDISVERNAFGRQVESFEADL 122

Query: 124 SIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKEKDS 183
            IP L     G E FR VFIRAP I++AG  V+VLAR                G+K    
Sbjct: 123 DIPVL-----GEEPFRAVFIRAPYIIEAGGGVEVLARF---------------GEK---- 182

Query: 184 ESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLK 218
               IV  RQG  LA AFHPELT D R H YFL+
Sbjct: 183 ----IVMARQGRCLAAAFHPELTGDLRIHRYFLE 185

[Close]

BLAST of Cucsat.G17957 vs. ExPASy Swiss-Prot
Match: Q2RMI9 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=pdxT PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.9e-43
Identity = 106/217 (48.85%), Postives = 125/217 (57.60%), Query Frame = 0


Query: 4   VGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFP 63
           +GVLA+QG+F EHI +L  LGV+GVEIR   QL  +A LIIPGGESTT+ KL    NL  
Sbjct: 3   IGVLAMQGAFREHIQSLEALGVQGVEIRHANQLEGIAGLIIPGGESTTIGKLMVEFNLLE 62

Query: 64  ALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFESEL 123
            +R     G PV+GTCAG++ LA    G     Q  +G ++  V RN FG Q+ SFE +L
Sbjct: 63  PVRHLAEGGLPVFGTCAGMVLLARDIIG---SDQPRLGLMNARVQRNAFGRQVDSFEVDL 122

Query: 124 SIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKEKDS 183
            IP L     G E F  VFIRAP I +  P  + LA                   K+K  
Sbjct: 123 EIPVL-----GEEPFHAVFIRAPYIEEIEPPAEALATF-----------------KDK-- 182

Query: 184 ESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAG 221
               IV VRQGNLLATAFHPELT D R HSYFLKM G
Sbjct: 183 ----IVMVRQGNLLATAFHPELTKDLRVHSYFLKMIG 188

[Close]

BLAST of Cucsat.G17957 vs. ExPASy Swiss-Prot
Match: Q6AFB8 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Leifsonia xyli subsp. xyli (strain CTCB07) OX=281090 GN=pdxT PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.5e-42
Identity = 101/213 (47.42%), Postives = 121/213 (56.81%), Query Frame = 0


Query: 4   VGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHNLFP 63
           VGVLALQG   EH+  L  LG   V +R+P++L  VA L+IPGGES+ M KLA    L  
Sbjct: 7   VGVLALQGDVREHLTVLWALGADAVRVRRPDELETVAGLVIPGGESSVMDKLARTVGLAG 66

Query: 64  ALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFESEL 123
            LR  +  G PV+GTCAGLI LA+        GQ  +GGLD  V RN FGSQ +SFE++L
Sbjct: 67  PLRNAIAGGLPVYGTCAGLIMLADTIV-DGIAGQRSLGGLDVAVRRNAFGSQAESFETDL 126

Query: 124 SIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKEKDS 183
           S P L     G E    VFIRAP +   GP   VLAR P             +G+     
Sbjct: 127 SFPTL-----GAEPMHAVFIRAPIVESVGPRATVLARVP-------------DGR----- 186

Query: 184 ESKVIVAVRQGNLLATAFHPELTSDNRWHSYFL 217
               +VAV Q NLL TAFHPEL+ D R+H YFL
Sbjct: 187 ----VVAVEQDNLLGTAFHPELSGDKRFHEYFL 191

[Close]

BLAST of Cucsat.G17957 vs. NCBI nr
Match: XP_004145736.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucumis sativus] >KGN46830.1 hypothetical protein Csa_020959 [Cucumis sativus])

HSP 1 Score: 486 bits (1252), Expect = 4.24e-173
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60
           MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN
Sbjct: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60

Query: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120
           LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE
Sbjct: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120

Query: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180
           SELSIPELVSSEGGPETFRGVFIRAPAILD GPEVQVLARCPVSSNSNLHSSSSGEGKKE
Sbjct: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDVGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180

Query: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240
           KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE
Sbjct: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240

Query: 241 RSKSDLPIFI 250
           RSKSDLPIFI
Sbjct: 241 RSKSDLPIFI 250

[Close]

BLAST of Cucsat.G17957 vs. NCBI nr
Match: XP_008463934.1 (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucumis melo])

HSP 1 Score: 481 bits (1239), Expect = 4.07e-171
Identity = 245/250 (98.00%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60
           MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN
Sbjct: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60

Query: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120
           LFPALREFV+MGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE
Sbjct: 61  LFPALREFVKMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120

Query: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180
           SELSIPELVSSEGGPETFRGVFIRAPAILD GPEVQVLA CPVSSNSNLHSSSSGEGKKE
Sbjct: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSNLHSSSSGEGKKE 180

Query: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240
           KD+ESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSS+ESIGVNNSRFE
Sbjct: 181 KDAESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSLESIGVNNSRFE 240

Query: 241 RSKSDLPIFI 250
           RSKSDLPIFI
Sbjct: 241 RSKSDLPIFI 250

[Close]

BLAST of Cucsat.G17957 vs. NCBI nr
Match: XP_038900301.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 [Benincasa hispida])

HSP 1 Score: 469 bits (1208), Expect = 2.16e-166
Identity = 239/250 (95.60%), Postives = 243/250 (97.20%), Query Frame = 0


Query: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60
           M IVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN
Sbjct: 1   MAIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60

Query: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120
           LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE
Sbjct: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120

Query: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180
           +ELSIPELVSSEGGPETFRGVFIRAPAILD GPEVQVLA CPVSSNSNLHS+SSGEGK+E
Sbjct: 121 TELSIPELVSSEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSNLHSNSSGEGKEE 180

Query: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240
           KDSE KVIVAVRQGNLLATAFHPELTSDNRWHSYFLKM GDVEESSSSI SIGVNNS FE
Sbjct: 181 KDSERKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMVGDVEESSSSIASIGVNNSTFE 240

Query: 241 RSKSDLPIFI 250
           RSK+DLPIFI
Sbjct: 241 RSKTDLPIFI 250

[Close]

BLAST of Cucsat.G17957 vs. NCBI nr
Match: KAA0035336.1 (putative pyridoxal 5'-phosphate synthase subunit PDX2 [Cucumis melo var. makuwa] >TYK14301.1 putative pyridoxal 5'-phosphate synthase subunit PDX2 [Cucumis melo var. makuwa])

HSP 1 Score: 457 bits (1176), Expect = 1.22e-161
Identity = 237/250 (94.80%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60
           MTIVGVLALQ        ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN
Sbjct: 1   MTIVGVLALQ--------ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60

Query: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120
           LFPALREFV+MGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE
Sbjct: 61  LFPALREFVKMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120

Query: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180
           SELSIPELVSSEGGPETFRGVFIRAPAILD GPEVQVLA CPVSSNSNLHSSSSGEGKKE
Sbjct: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSNLHSSSSGEGKKE 180

Query: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240
           KD+ESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSS+ESIGVNNSRFE
Sbjct: 181 KDAESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSLESIGVNNSRFE 240

Query: 241 RSKSDLPIFI 250
           RSKSDLPIFI
Sbjct: 241 RSKSDLPIFI 242

[Close]

BLAST of Cucsat.G17957 vs. NCBI nr
Match: XP_023534477.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 444 bits (1143), Expect = 1.75e-156
Identity = 226/250 (90.40%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60
           M  VGVLALQGS+NEHIAALRRLGVK VEI+KPEQLL+VASLIIPGGESTTMAKLAELHN
Sbjct: 1   MATVGVLALQGSYNEHIAALRRLGVKSVEIKKPEQLLDVASLIIPGGESTTMAKLAELHN 60

Query: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120
           LFP+LREFVRMGKPVWGTCAGLIFLANKATGQKTGGQ LVGGLDCTVHRNFFGSQLQSFE
Sbjct: 61  LFPSLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLQSFE 120

Query: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180
           +ELSIPELVS+EGGPETFRGVFIRAPAILD GPEVQVLA CPVSSNS LHS+SSGEGK+E
Sbjct: 121 TELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSALHSNSSGEGKEE 180

Query: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240
           K +E KVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVE SSSSI SIGV+NSRFE
Sbjct: 181 KGAEDKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEGSSSSIASIGVDNSRFE 240

Query: 241 RSKSDLPIFI 250
           RS  DLPIF+
Sbjct: 241 RSNIDLPIFL 250

[Close]

BLAST of Cucsat.G17957 vs. ExPASy TrEMBL
Match: A0A0A0KAR5 (Glutaminase OS=Cucumis sativus OX=3659 GN=Csa_6G139790 PE=3 SV=1)

HSP 1 Score: 486 bits (1252), Expect = 2.05e-173
Identity = 249/250 (99.60%), Postives = 249/250 (99.60%), Query Frame = 0


Query: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60
           MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN
Sbjct: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60

Query: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120
           LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE
Sbjct: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120

Query: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180
           SELSIPELVSSEGGPETFRGVFIRAPAILD GPEVQVLARCPVSSNSNLHSSSSGEGKKE
Sbjct: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDVGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180

Query: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240
           KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE
Sbjct: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240

Query: 241 RSKSDLPIFI 250
           RSKSDLPIFI
Sbjct: 241 RSKSDLPIFI 250

[Close]

BLAST of Cucsat.G17957 vs. ExPASy TrEMBL
Match: A0A1S3CLW1 (Glutaminase OS=Cucumis melo OX=3656 GN=LOC103501941 PE=3 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 1.97e-171
Identity = 245/250 (98.00%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60
           MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN
Sbjct: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60

Query: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120
           LFPALREFV+MGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE
Sbjct: 61  LFPALREFVKMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120

Query: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180
           SELSIPELVSSEGGPETFRGVFIRAPAILD GPEVQVLA CPVSSNSNLHSSSSGEGKKE
Sbjct: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSNLHSSSSGEGKKE 180

Query: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240
           KD+ESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSS+ESIGVNNSRFE
Sbjct: 181 KDAESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSLESIGVNNSRFE 240

Query: 241 RSKSDLPIFI 250
           RSKSDLPIFI
Sbjct: 241 RSKSDLPIFI 250

[Close]

BLAST of Cucsat.G17957 vs. ExPASy TrEMBL
Match: A0A5D3CR96 (Glutaminase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00240 PE=3 SV=1)

HSP 1 Score: 457 bits (1176), Expect = 5.91e-162
Identity = 237/250 (94.80%), Postives = 240/250 (96.00%), Query Frame = 0


Query: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60
           MTIVGVLALQ        ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN
Sbjct: 1   MTIVGVLALQ--------ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60

Query: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120
           LFPALREFV+MGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE
Sbjct: 61  LFPALREFVKMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120

Query: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180
           SELSIPELVSSEGGPETFRGVFIRAPAILD GPEVQVLA CPVSSNSNLHSSSSGEGKKE
Sbjct: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSNLHSSSSGEGKKE 180

Query: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240
           KD+ESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSS+ESIGVNNSRFE
Sbjct: 181 KDAESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSLESIGVNNSRFE 240

Query: 241 RSKSDLPIFI 250
           RSKSDLPIFI
Sbjct: 241 RSKSDLPIFI 242

[Close]

BLAST of Cucsat.G17957 vs. ExPASy TrEMBL
Match: A0A6J1H447 (Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111459428 PE=3 SV=1)

HSP 1 Score: 444 bits (1142), Expect = 1.20e-156
Identity = 226/250 (90.40%), Postives = 236/250 (94.40%), Query Frame = 0


Query: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60
           M  VGVLALQGS+NEHIAALRRLGVK VEIRKPEQLL+VASLIIPGGESTTMAKLAELHN
Sbjct: 1   MATVGVLALQGSYNEHIAALRRLGVKSVEIRKPEQLLDVASLIIPGGESTTMAKLAELHN 60

Query: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120
           LFP+LREFVRMGKPVWGTCAGLIFLANKATGQKTGGQ LVGGLDCTVHRNFFGSQLQSFE
Sbjct: 61  LFPSLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLQSFE 120

Query: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180
           +ELSIPELVS+EGGPETFRGVFIRAPAILD GPEVQVLA CPVSSNS LHS+SSGEGK+E
Sbjct: 121 TELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSSGEGKEE 180

Query: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240
           K +E KVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVE SSSSI SIGV+N RFE
Sbjct: 181 KGAEDKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEGSSSSIASIGVDNLRFE 240

Query: 241 RSKSDLPIFI 250
           RS  DLPIF+
Sbjct: 241 RSNIDLPIFL 250

[Close]

BLAST of Cucsat.G17957 vs. ExPASy TrEMBL
Match: A0A6J1CIP7 (Glutaminase OS=Momordica charantia OX=3673 GN=LOC111011333 PE=3 SV=1)

HSP 1 Score: 440 bits (1131), Expect = 5.70e-155
Identity = 223/250 (89.20%), Postives = 239/250 (95.60%), Query Frame = 0


Query: 1   MTIVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60
           M IVGVLALQGSFNEHI+ALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN
Sbjct: 1   MAIVGVLALQGSFNEHISALRRLGVKGVEIRKPEQLLNVASLIIPGGESTTMAKLAELHN 60

Query: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQGLVGGLDCTVHRNFFGSQLQSFE 120
           LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQ LVGGLDCTVHRNFFGSQLQSFE
Sbjct: 61  LFPALREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLQSFE 120

Query: 121 SELSIPELVSSEGGPETFRGVFIRAPAILDAGPEVQVLARCPVSSNSNLHSSSSGEGKKE 180
           +ELS+PELV++EGGPETFRGVFIRAPAILD GPEVQVLA CPVSSNSN++S+S+GE K+E
Sbjct: 121 AELSMPELVATEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSNVNSNSTGEDKEE 180

Query: 181 KDSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEESSSSIESIGVNNSRFE 240
           K SESKVIVAVRQGNLLATAFHPELTSD+RWHSYFLKMAG+V+ SSSSI   GV+N+R E
Sbjct: 181 KGSESKVIVAVRQGNLLATAFHPELTSDSRWHSYFLKMAGEVDGSSSSIAIEGVDNARLE 240

Query: 241 RSKSDLPIFI 250
           RSKSDLPIF+
Sbjct: 241 RSKSDLPIFL 250

The following BLAST results are available for this feature:

BLAST of Cucsat.G17957 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAD0	4.4e-98	72.22	Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX...	[more]
Q3Z8V9	1.1e-43	46.79	Pyridoxal 5'-phosphate synthase subunit PdxT OS=Dehalococcoides mccartyi (strain...	[more]
A5D6D2	6.8e-43	48.60	Pyridoxal 5'-phosphate synthase subunit PdxT OS=Pelotomaculum thermopropionicum ...	[more]
Q2RMI9	8.9e-43	48.85	Pyridoxal 5'-phosphate synthase subunit PdxT OS=Moorella thermoacetica (strain A...	[more]
Q6AFB8	1.5e-42	47.42	Pyridoxal 5'-phosphate synthase subunit PdxT OS=Leifsonia xyli subsp. xyli (stra...	[more]

BLAST of Cucsat.G17957 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145736.1	4.24e-173	99.60	probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucumis sativus] >KGN4683...	[more]
XP_008463934.1	4.07e-171	98.00	PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX2 [Cucumis melo]	[more]
XP_038900301.1	2.16e-166	95.60	probable pyridoxal 5'-phosphate synthase subunit PDX2 [Benincasa hispida]	[more]
KAA0035336.1	1.22e-161	94.80	putative pyridoxal 5'-phosphate synthase subunit PDX2 [Cucumis melo var. makuwa]...	[more]
XP_023534477.1	1.75e-156	90.40	probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Cucurbita pepo...	[more]

BLAST of Cucsat.G17957 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAR5	2.05e-173	99.60	Glutaminase OS=Cucumis sativus OX=3659 GN=Csa_6G139790 PE=3 SV=1	[more]
A0A1S3CLW1	1.97e-171	98.00	Glutaminase OS=Cucumis melo OX=3656 GN=LOC103501941 PE=3 SV=1	[more]
A0A5D3CR96	5.91e-162	94.80	Glutaminase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00240 PE=...	[more]
A0A6J1H447	1.20e-156	90.40	Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111459428 PE=3 SV=1	[more]
A0A6J1CIP7	5.70e-155	89.20	Glutaminase OS=Momordica charantia OX=3673 GN=LOC111011333 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	TIGRFAM	TIGR03800	TIGR03800	coord: 4..160 e-value: 1.0E-47 score: 160.4
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	PFAM	PF01174	SNO	coord: 6..158 e-value: 2.2E-41 score: 141.8
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	PIRSF	PIRSF005639	Glut_amidoT_SNO	coord: 1..186 e-value: 5.5E-61 score: 203.4
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	PANTHER	PTHR31559	PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO	coord: 2..179
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	PROSITE	PS51130	PDXT_SNO_2	coord: 3..196 score: 49.966351
IPR002161	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	CDD	cd01749	GATase1_PB	coord: 4..160 e-value: 1.47909E-79 score: 233.186
IPR029062	Class I glutamine amidotransferase-like	GENE3D	3.40.50.880		coord: 1..182 e-value: 6.4E-61 score: 207.6
IPR029062	Class I glutamine amidotransferase-like	SUPERFAMILY	52317	Class I glutamine amidotransferase-like	coord: 3..159
None	No IPR available	PANTHER	PTHR31559:SF1	SUBFAMILY NOT NAMED	coord: 2..179
None	No IPR available	PROSITE	PS51273	GATASE_TYPE_1	coord: 3..152 score: 9.585632
IPR021196	PdxT/SNO family, conserved site	PROSITE	PS01236	PDXT_SNO_1	coord: 41..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G17957.T1	Cucsat.G17957.T1	mRNA
Cucsat.G17957.T3	Cucsat.G17957.T3	mRNA
Cucsat.G17957.T2	Cucsat.G17957.T2	mRNA
Cucsat.G17957.T4	Cucsat.G17957.T4	mRNA
Cucsat.G17957.T5	Cucsat.G17957.T5	mRNA
Cucsat.G17957.T7	Cucsat.G17957.T7	mRNA
Cucsat.G17957.T6	Cucsat.G17957.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006541	glutamine metabolic process
biological_process	GO:0042823	pyridoxal phosphate biosynthetic process
biological_process	GO:0008614	pyridoxine metabolic process
biological_process	GO:0042819	vitamin B6 biosynthetic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:1903600	glutaminase complex
molecular_function	GO:0004359	glutaminase activity