Cucsat.G17340 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCATTCCAAGGACAGTTTGAAAACAGGAGATATGGTCGACCCATTAAATATTTGATGCCTATGATGCATTAACTTTCTTTAAATCTAACTTACACCTTTCCATTAACAAAAAAAATTGTCTTTTTTCATACATAGATCATAACATTTTATCCAGAACTTCTTAAAAAATGACAGAGAAAACATAGAAGGAATTAAAAAAAAAAAAATTGAATTTAGAGTTCTTGCTTATCTGTTAAAGGGTTGGCAAGTTTCTATTTTTGTGGGTTTAATGAAGGTTAAGAATGGAGATTATGCCATTGAAGCGCGTTTGTTCTTGTTGGGGTGAGTGAAAATGGGGAGCCATGGAGGCAAAAGGCCTAAAGTTATTTAAAGAAAGGGAAAGGAAGAAGAAAAAAGGGAGGCGTTTGGTTGAAGCTCCCAAGATTAAAATTTAGCAATAATTACTATATTTATTTGTGTTCTGTTTTGTGAATCTTTGCCTTGAAATTTCTTTACTCTCCTCATCCTTTTCTTCTTCTTTAATCTTCAAACTCCCTCACAATCCACTAAAAAAGGATCAGACATTGTGGAAAAGAAAAGAGAAAGAGAGGAGGATTCTGTTAAATGATTCTCAAATCTTGTTCCTTGTTCCTTCTTCCCTGTTACCGTTTTTTTCTCTCTTTACCCAAATCATTCTTTGTTTCTGTTTTCTGAAAATCGTTTTTGGGGTTTTCTTTTATATTCCCAAGAAAGAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGACCCTCTTTCTTATTGTTCTTCTTCTTCTTTCATTGGCAGCCATGACTGAGGTTGTTCTTCATTCCCCTTCTCATTTTGCTTCATCCCGCAGAAGGGTTTCTTCTTCTTCTTCGTCTTCCACGGTTACTGTTACATGTCCAACGCCTCCCAATGATGGATCTCTCCTTGTCAACATGCATTCTCAAACACCCATTTCCCCTTCTTCTTCTTCTTCTTCTGTAGATGGGGATGGGGATGTTACCGAGATTGAATGTGAAGTGGAGGAGGTGGTGGGGAAGGACCGGTTTAAGCAAAGAAGAGATCAGCTCTCATTGTTGGCTTTAGTTGTAACCCTTTTCAGGAAATCTTTAATTGCTTGCAAGAGTGATAGAAGAGAGCTATGCGCAATGGAGATCGGTTGGCCGACCAATGTACGCCATGTCACCCATGTTACTTTTGATAGGTTTAATGGATTCTTGGGCTTGCCTGTTGAGTTTGAACCAGAAGTGCCTCGCAGGGCTCCAAGTGCTAGGTACATTCCTTTTTTTTCCGACTGCTTACAGAATTTGGTCGTGAGTATTGATTGTTTGGCCTTATGCTTCTTTCTTTATACACTGATTCTTTATGTCTTTTTGTTGGTTTTGGTTGTGTGATTCTTGAAGTTAAGTAGCTAATGTCTTAATTATACTTCTATTTTTTGCAATTCTGAAGTTTGGGAAGTCGTTCTAGTTGGTTGAGGTTCAACCCTCCAAAGCTTTTGTTGCTGTCTATTTATCCATCTGAATAGCTATCTCTTTCGTCTGTTGTGACTATCTGGTGCCTTCTTTCTAAATTTCCTTTGAGATTAAGGATTTGTTGAGGAATGTTTCTGTTCCTGGATTTGAGGCATCATGAACATGGACACTCGTCACGTTTCTCCTTAATTTATTATATATCTAATTTATGTGTCTTGAAGTAAGAAAGAAGAATCGATGAGTTCTGTAGCTTCAGTTTCTACCAGAAATGGAAATGAAAGAGAAGAGAAGTATGGACTTTGATTTTCCAATGAAATGTAACCTATAAACTCATATCAAATTTAGGAAAATTTATTGCCACATGGTGTCTCTCCCCTTCCCCAAACCCTCTTTGGTCCCTGGATCTTTTGCATCCTTATGGTATAAAAGTGCCAACCACATCATTCTAGGCTCATCAAATTGTTTCTCCAAATGTAGAGCCCTTTTCTATTTTGGTCTTCTGCATCACACCTTATGTGATTCCATAATCTTGCTGCATATTGGTGCTGTTCCCTTGCCTTGATACTTGATTTCTATATAGTGTTTTTTTGTTGCTTGCCTATTTTAGGACTTATTTCCTTGAAATTACATTTGTAGTACCACGGTGTTTGGGGTTTCAACTGAATCCATGCAATTGTCATATGACTCGAGAGGGAATAGCGTGCCAACAATTCTTATACTAATGCAACACTGTCTGTATGCTCAAGGTGGCTTGCAGGTACATTCACTTTATTTTCATTTATGCGTAACTCCTTAATTGTAAATCCAAAATTCTGGTTCATTAATGCCACAAAGGCCTAGTGAAAAAAAAGAACAAGAAATGATCTTCCGATTTTTGTCGTGATGGTGAAGATAAGATAGATTTTCAGATCTAATGCCGAAGGTAGTTTCCGGTGTTCTTTAAGTTTTACACTGTGGATGCATTGTTAATTGGTCCAGCCTAGTGTTTGCTTCTGATTTGTCTTTTCATCCCTTCAGGCTGAAGGCATTTTCAGAATTAATGCAGAAAACAGTCAAGAGGAGTATGTACGTGATCAGTTAAATCAAGGAGTGGTACCTGACGACATTGATGTACATTGTTTAGCTGGCCTTATCAAGGTTATCTCAATTTAATTAAAACTCAAAGATAAATCTATAGGTATTGAATTTGAATAATACTGTTGATTGGTCTGTGAAAATTTGCTATAATCATAGAAATAAATGCTTATAAAATGAGAAATTTGTATGGGATCTGGTTCTTGTTAATAATTAAATGTATTGTCACAAAGAACATGGACAAATATCCATTGGATATGATGGTCCAGGGTTTATACCCCTGTAAATTACTTGCTCAAACACCTATTCAAAGCACATAATATATTTAGTTGGTTCCCGGTTCTCTTCTAAATTTTTTGCAAGATTTGGTTAAGTCATCTTACTTGATAGATGCTGAAAATGTCATCATTGTGGAATGTTATTTTTGCTTTCCTCCGATTGAGTGTGTGGTTCATTTTTGCCTATAGGTTGTCTGTTTTCATCTCTTATGGAATATTCCTTTCCTCTGTTTCTTCAATATGCATACTGTACGGTTTTTGTTTAGTAGGATCGTCTGATGGTCGTGAGTTTTCTTTTCCCCCTTATATGTTACCCAAGGGATCTCTTTTCACAAATCATAGATCATTTAGTCTTACTCAACAGTAACCTTGTAACTCATATCCAGTGAAATACATTAAGTTTAGAAAGTGAATCATATTCTACACAAACATGAACGAATTTCCTAATAATATGGCATCATAATTGGTTTAGAGTTGGATTAATAGAAGAAATAATAATATGACTAGAGACTAAACTGTTGTGCTGGCTATAGATGTTGTTTGTTTCTTTTACAAGTAATTTTGATTTCCATGTGTTCAATTTTTACTTATTAAAAATTAACAGGCTTGGTTCAGAGAACTCCCAGCTGGGATTTTGGATTCTCTGTCGCCCGAGGAGGTCATGGAGTGCCAGACAGAAGAAGAATGTGCTGACCTAATAAGGCATCTACCTCCTAGTGAAGCTTCTCTGCTGGATTGGGCAATCAACCTAATGGCAGATGTTGTCACGCAGGAACATTTCAACAAAATGAATGCTCGCAACATCGCTATGGTTTTTGCACCAAACATGACTCAGGTGAAATTCAAATAGCTTATGTTAGTTAAGTCCACTTTCTGGAGACGAGAAATGTTTCTAACTTCTGAGTCTACGTGAAACACATTGAAGATTTGGTATCTTAACTTTTAGTTCCTTTTCTGATTTGCAAGATTTTTCTTTAATCCTTTTTGGAAGCCTGTGTTTACCTGTCCAAAACTGACTCTGCAATGCGTTCTAAAGTTCCGATTCTGACAAACACAAGAATACATAAGTTTGCTTTTCCCAATTGTCGAGTTCCTGTTGATGATCATTGGTTGTGCTTGATCCATCTGACAATGGTTTTCTGGCATTCTTTTCATGCAGATGGCCGACCCTTTGACGGCATTGATGTATGCTGTTCAAGTTATGAACTTTCTCAGGATGCTGATCTTAAGGACACTCCGAGGAAGGGAAGACTCCATTCTCGACTCTGCTGCTACACATTTAGAGCCGCCTGATGAGAGTGGCCACCAGAGTCCTTCACAGCCCTGCCTTGGAAATACCGTCACTGTATTTCAGGTGGCAGAGCAAACCGTGCCTGAGTTTTTTGCAGAACCGCCTGTTCTAGAAACATATTCCGACTGTAACAAAGGTGCACGTTTTTCTGATGGAGATGTTTTTTCTTTAAGCCATGTCAAGAAACTGTTACCTAATCGATATAGATCTTTACGGAATGCCCACGAAGACAAAGAAGCTGTTACAGGCAATGACATGAAGGCAGAAGTTGTAATCCAAACTGATCTATCAAATGTTCCAAATCTGAAAAAAGAAACTAACAAACTAAATAACCAGAACTCTGTATTCCAAGTCTTGGCACCGGTACCGGTAGAGAAGCGGCTCAGCAACTTTAGTTGTATAAATTCATGGACAGAGCGAATCGAAGCTTGGCGATAAATAGGTAAAACTGTTAACGAAACTTGCTGTGCTATAAAAGATGACACTTTTAAGAAGTTTGTTGAATATGCTGACCTGACCACATATGAGGTTGCTAATTTTTACGCATGTTTGGCTTAACTTGGGGGTTTTGGAACTGAGCTTCTTCATTATGATATGTGGTTTCATGTATTTTTTTTTCTTTCTTATTTTTCTTTTTTCTGAGTAATGTGGGCACAAGAATTGCCTCCTCAGTTATATGTAATAAGTAAATAATCAATTCTAGGCATCTGAATATATAGCAGGTGATAAAGTTTCATGTTATTATAGATTAGAGGAATGGTGAGGGGAGATGCAAATGAAGTTATTTGGTGCCATATTAAGTAGAAGCTCCCAACACTTCATATCCGACCAAAGTGGTTCAAATTCTTATTTTTTCATATGTTGATTCCTCAATTATTT ATGACTGAGGTTGTTCTTCATTCCCCTTCTCATTTTGCTTCATCCCGCAGAAGGGTTTCTTCTTCTTCTTCGTCTTCCACGGTTACTGTTACATGTCCAACGCCTCCCAATGATGGATCTCTCCTTGTCAACATGCATTCTCAAACACCCATTTCCCCTTCTTCTTCTTCTTCTTCTGTAGATGGGGATGGGGATGTTACCGAGATTGAATGTGAAGTGGAGGAGGTGGTGGGGAAGGACCGGTTTAAGCAAAGAAGAGATCAGCTCTCATTGTTGGCTTTAGTTGTAACCCTTTTCAGGAAATCTTTAATTGCTTGCAAGAGTGATAGAAGAGAGCTATGCGCAATGGAGATCGGTTGGCCGACCAATGTACGCCATGTCACCCATGTTACTTTTGATAGGTTTAATGGATTCTTGGGCTTGCCTGTTGAGTTTGAACCAGAAGTGCCTCGCAGGGCTCCAAGTGCTAGTACCACGGTGTTTGGGGTTTCAACTGAATCCATGCAATTGTCATATGACTCGAGAGGGAATAGCGTGCCAACAATTCTTATACTAATGCAACACTGTCTGTATGCTCAAGGTGGCTTGCAGGCTGAAGGCATTTTCAGAATTAATGCAGAAAACAGTCAAGAGGAGTATGTACGTGATCAGTTAAATCAAGGAGTGGTACCTGACGACATTGATGTACATTGTTTAGCTGGCCTTATCAAGGCTTGGTTCAGAGAACTCCCAGCTGGGATTTTGGATTCTCTGTCGCCCGAGGAGGTCATGGAGTGCCAGACAGAAGAAGAATGTGCTGACCTAATAAGGCATCTACCTCCTAGTGAAGCTTCTCTGCTGGATTGGGCAATCAACCTAATGGCAGATGTTGTCACGCAGGAACATTTCAACAAAATGAATGCTCGCAACATCGCTATGGTTTTTGCACCAAACATGACTCAGATGGCCGACCCTTTGACGGCATTGATGTATGCTGTTCAAGTTATGAACTTTCTCAGGATGCTGATCTTAAGGACACTCCGAGGAAGGGAAGACTCCATTCTCGACTCTGCTGCTACACATTTAGAGCCGCCTGATGAGAGTGGCCACCAGAGTCCTTCACAGCCCTGCCTTGGAAATACCGTCACTGTATTTCAGGTGGCAGAGCAAACCGTGCCTGAGTTTTTTGCAGAACCGCCTGTTCTAGAAACATATTCCGACTGTAACAAAGGTGCACGTTTTTCTGATGGAGATGTTTTTTCTTTAAGCCATGTCAAGAAACTGTTACCTAATCGATATAGATCTTTACGGAATGCCCACGAAGACAAAGAAGCTGTTACAGGCAATGACATGAAGGCAGAAGTTGTAATCCAAACTGATCTATCAAATGTTCCAAATCTGAAAAAAGAAACTAACAAACTAAATAACCAGAACTCTGTATTCCAAGTCTTGGCACCGGTACCGGTAGAGAAGCGGCTCAGCAACTTTAGTTGTATAAATTCATGGACAGAGCGAATCGAAGCTTGGCGATAA MTEVVLHSPSHFASSRRRVSSSSSSSTVTVTCPTPPNDGSLLVNMHSQTPISPSSSSSSVDGDGDVTEIECEVEEVVGKDRFKQRRDQLSLLALVVTLFRKSLIACKSDRRELCAMEIGWPTNVRHVTHVTFDRFNGFLGLPVEFEPEVPRRAPSASTTVFGVSTESMQLSYDSRGNSVPTILILMQHCLYAQGGLQAEGIFRINAENSQEEYVRDQLNQGVVPDDIDVHCLAGLIKAWFRELPAGILDSLSPEEVMECQTEEECADLIRHLPPSEASLLDWAINLMADVVTQEHFNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLRMLILRTLRGREDSILDSAATHLEPPDESGHQSPSQPCLGNTVTVFQVAEQTVPEFFAEPPVLETYSDCNKGARFSDGDVFSLSHVKKLLPNRYRSLRNAHEDKEAVTGNDMKAEVVIQTDLSNVPNLKKETNKLNNQNSVFQVLAPVPVEKRLSNFSCINSWTERIEAWR Homology
BLAST of Cucsat.G17340 vs. ExPASy Swiss-Prot
Match: Q9FMR1 (Rho GTPase-activating protein 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP1 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13 Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of Cucsat.G17340 vs. ExPASy Swiss-Prot
Match: Q9CAX8 (Rho GTPase-activating protein 4 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP4 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06 Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of Cucsat.G17340 vs. ExPASy Swiss-Prot
Match: F4JI46 (Rho GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP2 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.3e-04 Identity = 40/116 (34.48%), Postives = 55/116 (47.41%), Query Frame = 0
BLAST of Cucsat.G17340 vs. ExPASy Swiss-Prot
Match: Q8GYY5 (Rho GTPase-activating protein 3 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP3 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 6.2e-04 Identity = 23/33 (69.70%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of Cucsat.G17340 vs. NCBI nr
Match: XP_011657586.1 (rho GTPase-activating protein 1 [Cucumis sativus]) HSP 1 Score: 379 bits (972), Expect = 9.19e-128 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of Cucsat.G17340 vs. NCBI nr
Match: KAE8647361.1 (hypothetical protein Csa_002953 [Cucumis sativus]) HSP 1 Score: 379 bits (972), Expect = 9.49e-128 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of Cucsat.G17340 vs. NCBI nr
Match: XP_008449576.1 (PREDICTED: rho GTPase-activating protein 1 [Cucumis melo] >KAA0061715.1 rho GTPase-activating protein 1 [Cucumis melo var. makuwa] >TYJ96051.1 rho GTPase-activating protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 367 bits (943), Expect = 2.56e-123 Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 0
BLAST of Cucsat.G17340 vs. NCBI nr
Match: XP_038902710.1 (rho GTPase-activating protein 1 [Benincasa hispida] >XP_038902711.1 rho GTPase-activating protein 1 [Benincasa hispida]) HSP 1 Score: 338 bits (868), Expect = 5.59e-112 Identity = 175/195 (89.74%), Postives = 176/195 (90.26%), Query Frame = 0
BLAST of Cucsat.G17340 vs. NCBI nr
Match: KAG7010344.1 (Rho GTPase-activating protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 277 bits (708), Expect = 4.79e-88 Identity = 149/195 (76.41%), Postives = 161/195 (82.56%), Query Frame = 0
BLAST of Cucsat.G17340 vs. ExPASy TrEMBL
Match: A0A5A7V780 (Rho GTPase-activating protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00100 PE=4 SV=1) HSP 1 Score: 367 bits (943), Expect = 1.24e-123 Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 0
BLAST of Cucsat.G17340 vs. ExPASy TrEMBL
Match: A0A1S3BN98 (rho GTPase-activating protein 1 OS=Cucumis melo OX=3656 GN=LOC103491418 PE=4 SV=1) HSP 1 Score: 367 bits (943), Expect = 1.24e-123 Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 0
BLAST of Cucsat.G17340 vs. ExPASy TrEMBL
Match: A0A6J1K4N5 (rho GTPase-activating protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490729 PE=4 SV=1) HSP 1 Score: 275 bits (703), Expect = 1.31e-87 Identity = 145/196 (73.98%), Postives = 159/196 (81.12%), Query Frame = 0
BLAST of Cucsat.G17340 vs. ExPASy TrEMBL
Match: A0A6J1DFJ4 (rho GTPase-activating protein 1 OS=Momordica charantia OX=3673 GN=LOC111020616 PE=4 SV=1) HSP 1 Score: 274 bits (700), Expect = 6.33e-87 Identity = 147/197 (74.62%), Postives = 161/197 (81.73%), Query Frame = 0
BLAST of Cucsat.G17340 vs. ExPASy TrEMBL
Match: A0A6J1FYN1 (rho GTPase-activating protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448868 PE=4 SV=1) HSP 1 Score: 271 bits (694), Expect = 3.11e-86 Identity = 146/195 (74.87%), Postives = 158/195 (81.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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